Query 025169
Match_columns 257
No_of_seqs 195 out of 1703
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:04:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rys_A Adenosine deaminase 1; 100.0 4.9E-54 1.7E-58 387.3 25.7 239 16-255 94-339 (343)
2 4gxw_A Adenosine deaminase; am 100.0 1.9E-54 6.5E-59 394.5 20.6 240 16-255 109-360 (380)
3 3iar_A Adenosine deaminase; pu 100.0 1.4E-52 4.7E-57 380.6 24.1 238 16-254 91-350 (367)
4 3pao_A Adenosine deaminase; st 100.0 4.4E-51 1.5E-55 365.9 16.6 223 16-239 91-320 (326)
5 3lgd_A Adenosine deaminase CEC 100.0 1.2E-47 4E-52 359.6 23.5 251 5-255 200-478 (508)
6 2pgf_A Adenosine deaminase; me 100.0 2.9E-46 9.9E-51 340.6 19.8 236 10-248 121-370 (371)
7 2a3l_A AMP deaminase, AMPD; at 100.0 2.6E-39 8.8E-44 311.8 11.9 236 8-249 358-654 (701)
8 4aql_A Guanine deaminase; hydr 99.9 5.7E-22 2E-26 185.5 21.5 198 37-238 169-406 (476)
9 3ls9_A Triazine hydrolase; atr 99.9 1.6E-21 5.3E-26 179.9 19.2 197 38-238 140-379 (456)
10 4dyk_A Amidohydrolase; adenosi 99.9 8.2E-21 2.8E-25 175.1 17.8 191 42-238 138-361 (451)
11 3h4u_A Amidohydrolase; signatu 99.9 7.6E-21 2.6E-25 176.8 17.4 195 40-238 163-398 (479)
12 4dzh_A Amidohydrolase; adenosi 99.8 3.9E-20 1.3E-24 172.3 19.5 191 42-238 145-368 (472)
13 3mdu_A N-formimino-L-glutamate 99.8 1.4E-20 4.9E-25 174.6 14.7 191 38-236 136-374 (453)
14 3lnp_A Amidohydrolase family p 99.8 9.6E-20 3.3E-24 168.9 15.9 191 42-238 158-386 (468)
15 4f0r_A 5-methylthioadenosine/S 99.8 1E-19 3.5E-24 167.6 14.2 191 42-238 136-359 (447)
16 4f0l_A Amidohydrolase; ssgcid, 99.8 8E-19 2.7E-23 162.5 13.7 190 38-236 145-382 (458)
17 3v7p_A Amidohydrolase family p 99.8 1.9E-18 6.5E-23 159.3 12.8 188 44-237 126-354 (427)
18 2ood_A BLR3880 protein; PSI-II 99.7 2.1E-17 7.3E-22 154.1 15.9 195 38-238 144-393 (475)
19 2i9u_A Cytosine/guanine deamin 99.7 7.7E-17 2.6E-21 148.2 16.1 193 39-235 140-372 (439)
20 2bb0_A Imidazolonepropionase; 99.7 7.9E-17 2.7E-21 147.3 13.9 141 95-238 226-369 (421)
21 3gnh_A L-lysine, L-arginine ca 99.7 9.7E-17 3.3E-21 145.3 14.2 169 65-238 165-360 (403)
22 2imr_A Hypothetical protein DR 99.7 1.4E-16 4.9E-21 146.0 14.9 188 46-238 162-399 (420)
23 3feq_A Putative amidohydrolase 99.7 4.8E-17 1.6E-21 148.2 11.1 168 65-238 170-364 (423)
24 2paj_A Putative cytosine/guani 99.7 1.6E-16 5.4E-21 148.1 14.6 196 38-237 148-401 (492)
25 2q09_A Imidazolonepropionase; 99.7 1.9E-16 6.6E-21 144.6 14.6 141 95-238 219-362 (416)
26 2r8c_A Putative amidohydrolase 99.7 1.7E-16 5.7E-21 145.5 13.3 168 65-238 173-367 (426)
27 2puz_A Imidazolonepropionase; 99.7 5.1E-16 1.7E-20 141.7 13.2 141 95-238 231-374 (419)
28 2qs8_A XAA-Pro dipeptidase; am 99.6 6.1E-15 2.1E-19 134.6 16.4 139 94-238 211-370 (418)
29 1ra0_A Cytosine deaminase; alp 99.6 1.1E-15 3.6E-20 140.3 10.6 167 70-238 170-369 (430)
30 1p1m_A Hypothetical protein TM 99.6 2.2E-15 7.4E-20 137.1 9.6 185 42-237 120-328 (406)
31 2qt3_A N-isopropylammelide iso 99.6 2E-14 6.8E-19 130.2 14.2 162 67-238 167-355 (403)
32 3be7_A Zn-dependent arginine c 99.5 1.5E-13 5.2E-18 124.6 16.5 139 95-237 202-358 (408)
33 3icj_A Uncharacterized metal-d 99.5 3.1E-14 1.1E-18 135.0 11.2 137 96-237 326-481 (534)
34 3ooq_A Amidohydrolase; structu 99.5 2.5E-13 8.5E-18 123.4 10.8 135 99-238 207-348 (396)
35 2p9b_A Possible prolidase; pro 99.4 2.4E-12 8.2E-17 118.9 15.5 139 95-238 223-390 (458)
36 2vun_A Enamidase; nicotinate d 99.3 5.3E-12 1.8E-16 113.6 11.5 135 96-236 171-320 (386)
37 3hpa_A Amidohydrolase; signatu 99.1 7.2E-09 2.5E-13 94.3 18.6 143 92-238 233-398 (479)
38 1yrr_A N-acetylglucosamine-6-p 99.1 8.2E-11 2.8E-15 106.1 5.3 134 99-238 175-347 (382)
39 2ics_A Adenine deaminase; TIM 99.0 6E-09 2E-13 93.1 14.5 147 83-238 149-319 (379)
40 2ogj_A Dihydroorotase; TIM bar 99.0 2.9E-09 1E-13 96.9 12.0 134 95-238 185-337 (417)
41 2vhl_A N-acetylglucosamine-6-p 98.8 1.1E-08 3.8E-13 92.3 8.7 132 103-238 186-355 (396)
42 2z00_A Dihydroorotase; zinc bi 98.7 1.1E-08 3.7E-13 92.9 6.9 153 84-237 141-366 (426)
43 2gwn_A Dihydroorotase; zinc-bi 98.7 3.2E-09 1.1E-13 98.1 2.6 128 98-237 221-375 (452)
44 1xrt_A Dihydroorotase, dhoase; 98.7 2.1E-08 7E-13 92.8 7.0 142 94-237 201-408 (467)
45 1o12_A N-acetylglucosamine-6-p 98.7 2.5E-08 8.4E-13 90.1 6.7 128 103-238 172-341 (376)
46 1gkp_A Hydantoinase; hydrolase 98.7 6E-07 2E-11 82.2 15.7 140 94-238 158-378 (458)
47 1nfg_A D-hydantoinase; TIM bar 98.6 2.5E-08 8.6E-13 91.5 6.0 135 98-238 216-377 (457)
48 1gkr_A Hydantoinase, non-ATP d 98.6 5.5E-07 1.9E-11 82.3 13.3 142 95-238 160-376 (458)
49 1e9y_B Urease subunit beta; hy 98.5 2.5E-07 8.4E-12 88.2 10.0 193 37-238 176-421 (569)
50 1yix_A Deoxyribonuclease YCFH; 98.4 4.4E-06 1.5E-10 71.0 14.2 132 99-239 111-259 (265)
51 2fty_A Dihydropyrimidinase; al 98.3 6.9E-06 2.3E-10 78.0 13.4 144 94-238 174-435 (559)
52 1zzm_A Putative deoxyribonucle 98.3 6.3E-05 2.2E-09 63.8 17.2 129 99-236 114-258 (259)
53 3nqb_A Adenine deaminase 2; PS 98.3 9.5E-06 3.3E-10 77.9 13.3 181 39-237 135-337 (608)
54 4ac7_C Urease subunit alpha; h 98.2 2.7E-06 9.1E-11 80.9 8.7 193 37-238 177-422 (570)
55 3mtw_A L-arginine carboxypepti 98.2 3.2E-06 1.1E-10 73.2 8.2 134 97-238 205-360 (403)
56 4ubp_C Protein (urease (chain 98.2 2.7E-06 9.1E-11 80.9 8.2 193 37-238 177-422 (570)
57 3sfw_A Dihydropyrimidinase; hy 98.2 4.2E-05 1.4E-09 70.5 16.0 200 35-238 100-380 (461)
58 2vm8_A Dihydropyrimidinase-rel 98.2 2.5E-05 8.4E-10 72.6 14.0 144 94-238 185-407 (501)
59 1rk6_A D-aminoacylase; TIM bar 98.2 3.1E-05 1.1E-09 72.0 14.3 79 158-237 316-429 (496)
60 2y1h_A Putative deoxyribonucle 98.1 0.00014 4.8E-09 62.1 16.7 128 99-237 126-266 (272)
61 3rcm_A TATD family hydrolase; 98.0 0.00038 1.3E-08 60.6 18.0 133 99-239 114-267 (287)
62 1onw_A Isoaspartyl dipeptidase 97.9 6.7E-05 2.3E-09 67.2 10.4 136 95-237 172-343 (390)
63 1xwy_A DNAse TATD, deoxyribonu 97.9 0.00039 1.3E-08 58.9 14.4 129 99-236 112-262 (264)
64 2vc7_A Aryldialkylphosphatase; 97.8 0.00023 7.7E-09 62.0 12.0 133 99-233 151-312 (314)
65 1bf6_A Phosphotriesterase homo 97.7 0.00049 1.7E-08 58.9 12.6 132 99-233 138-289 (291)
66 3hm7_A Allantoinase; metallo-d 97.7 0.00033 1.1E-08 64.0 12.2 143 96-238 166-379 (448)
67 2xio_A Putative deoxyribonucle 97.6 0.0024 8.4E-08 55.4 16.2 129 99-238 127-294 (301)
68 3gri_A Dihydroorotase, dhoase; 97.6 0.00018 6.1E-09 65.5 8.8 144 93-236 152-362 (424)
69 3tn4_A Phosphotriesterase; lac 97.6 0.0014 4.6E-08 58.9 14.3 149 83-233 176-357 (360)
70 3k2g_A Resiniferatoxin-binding 97.6 0.00077 2.6E-08 60.6 12.5 138 99-238 190-356 (364)
71 3mpg_A Dihydroorotase, dhoase; 97.6 0.00023 8E-09 64.6 9.1 153 84-237 145-364 (428)
72 2ob3_A Parathion hydrolase; me 97.6 0.00066 2.3E-08 60.0 11.6 135 99-234 148-324 (330)
73 3dc8_A Dihydropyrimidinase; TI 97.5 0.0035 1.2E-07 58.3 16.3 198 34-238 97-377 (490)
74 3gtx_A Organophosphorus hydrol 97.5 0.0016 5.5E-08 57.9 13.1 135 99-233 173-337 (339)
75 1j6o_A TATD-related deoxyribon 97.4 0.00078 2.7E-08 57.5 10.1 129 99-236 120-265 (268)
76 3rhg_A Putative phophotriester 97.4 0.0014 4.9E-08 58.8 12.1 137 99-237 179-345 (365)
77 2gzx_A Putative TATD related D 97.4 0.005 1.7E-07 51.8 14.6 131 99-238 109-257 (265)
78 2vr2_A Dihydropyrimidinase; hy 97.4 0.0039 1.3E-07 58.6 15.2 144 93-238 189-412 (541)
79 2ftw_A Dihydropyrimidine amido 97.3 0.0037 1.3E-07 58.4 14.5 145 93-238 166-389 (521)
80 3ovg_A Amidohydrolase; structu 97.3 0.0009 3.1E-08 60.1 9.8 153 83-237 152-331 (363)
81 3pnz_A Phosphotriesterase fami 97.3 0.003 1E-07 56.0 13.0 136 99-236 168-328 (330)
82 3e74_A Allantoinase; (beta/alp 97.2 0.0026 8.9E-08 58.8 12.1 141 95-237 183-395 (473)
83 3cjp_A Predicted amidohydrolas 97.1 0.034 1.1E-06 47.0 16.5 141 82-237 114-265 (272)
84 3gg7_A Uncharacterized metallo 97.0 0.0085 2.9E-07 51.0 12.0 128 99-237 104-245 (254)
85 1v77_A PH1877P, hypothetical p 96.6 0.01 3.5E-07 49.0 9.2 130 97-231 63-204 (212)
86 3irs_A Uncharacterized protein 96.4 0.14 4.8E-06 43.9 15.7 146 83-238 118-282 (291)
87 3ipw_A Hydrolase TATD family p 96.4 0.033 1.1E-06 49.1 11.4 126 99-236 154-322 (325)
88 2ffi_A 2-pyrone-4,6-dicarboxyl 96.4 0.072 2.5E-06 45.2 13.4 155 83-239 105-282 (288)
89 3mkv_A Putative amidohydrolase 96.3 0.013 4.5E-07 50.2 8.4 136 98-238 214-367 (426)
90 3gip_A N-acyl-D-glutamate deac 95.8 0.22 7.5E-06 45.8 14.8 174 65-238 162-416 (480)
91 2f6k_A Metal-dependent hydrola 95.7 0.069 2.4E-06 45.6 10.3 164 65-233 101-304 (307)
92 2dvt_A Thermophilic reversible 95.4 0.64 2.2E-05 39.8 15.5 184 47-237 88-325 (327)
93 3iv8_A N-acetylglucosamine-6-p 95.0 0.89 3E-05 40.7 15.4 195 37-238 77-347 (381)
94 2z26_A Dihydroorotase, dhoase; 94.8 0.12 4E-06 45.6 8.9 138 97-237 118-306 (347)
95 3ewb_X 2-isopropylmalate synth 94.4 0.58 2E-05 40.4 12.3 105 33-140 113-227 (293)
96 3guw_A Uncharacterized protein 94.4 0.064 2.2E-06 45.7 5.9 126 99-238 110-250 (261)
97 4i6k_A Amidohydrolase family p 94.3 0.35 1.2E-05 41.4 10.7 150 83-237 118-292 (294)
98 2hbv_A 2-amino-3-carboxymucona 94.2 1.1 3.6E-05 38.8 13.8 163 64-236 124-332 (334)
99 2i5g_A Amidohydrolase; NYSGXRC 94.2 1.1 3.9E-05 39.2 13.8 90 100-197 140-250 (325)
100 1itu_A Renal dipeptidase; glyc 94.2 0.61 2.1E-05 41.7 12.1 127 100-234 179-334 (369)
101 2wm1_A 2-amino-3-carboxymucona 94.1 1.1 3.6E-05 38.8 13.4 168 64-239 120-333 (336)
102 4do7_A Amidohydrolase 2; enzym 93.7 0.92 3.2E-05 38.8 12.1 162 79-244 97-296 (303)
103 3rmj_A 2-isopropylmalate synth 93.6 1.2 4.1E-05 39.8 13.0 131 7-140 89-234 (370)
104 1nvm_A HOA, 4-hydroxy-2-oxoval 93.4 0.74 2.5E-05 40.6 11.2 117 39-158 121-251 (345)
105 3eeg_A 2-isopropylmalate synth 93.2 0.98 3.4E-05 39.5 11.6 105 33-140 114-228 (325)
106 2nx9_A Oxaloacetate decarboxyl 93.2 2.5 8.5E-05 38.9 14.8 100 38-140 127-231 (464)
107 3ble_A Citramalate synthase fr 93.1 0.45 1.5E-05 41.9 9.2 121 33-156 129-268 (337)
108 3e2v_A 3'-5'-exonuclease; stru 93.0 3 0.0001 37.6 14.6 124 99-234 179-392 (401)
109 1rqb_A Transcarboxylase 5S sub 92.5 3.6 0.00012 38.5 14.9 100 38-140 144-250 (539)
110 1eye_A DHPS 1, dihydropteroate 92.3 1.4 4.8E-05 37.8 11.1 97 65-165 27-132 (280)
111 3ivs_A Homocitrate synthase, m 92.3 2.7 9.3E-05 38.1 13.5 120 16-139 123-252 (423)
112 2ztj_A Homocitrate synthase; ( 92.2 0.82 2.8E-05 41.0 9.8 120 17-140 88-219 (382)
113 1ydo_A HMG-COA lyase; TIM-barr 92.0 1.2 4.2E-05 38.6 10.5 105 33-140 114-231 (307)
114 3ij6_A Uncharacterized metal-d 91.9 4.1 0.00014 35.1 13.9 186 46-235 89-304 (312)
115 2rag_A Dipeptidase; aminohydro 91.8 2 6.9E-05 38.9 12.0 62 100-165 210-283 (417)
116 2cw6_A Hydroxymethylglutaryl-C 91.4 1.9 6.6E-05 37.0 11.0 104 33-140 113-230 (298)
117 2ftp_A Hydroxymethylglutaryl-C 91.3 1.8 6.3E-05 37.2 10.8 105 33-140 116-233 (302)
118 1aj0_A DHPS, dihydropteroate s 91.1 2.1 7E-05 36.8 10.8 96 66-165 37-141 (282)
119 3ly0_A Dipeptidase AC. metallo 90.7 3.2 0.00011 36.9 12.0 130 100-233 193-350 (364)
120 1ydn_A Hydroxymethylglutaryl-C 89.0 2.9 9.9E-05 35.7 10.1 104 33-140 112-229 (295)
121 4e38_A Keto-hydroxyglutarate-a 89.0 8.9 0.00031 31.8 14.7 83 100-193 115-200 (232)
122 1twd_A Copper homeostasis prot 88.6 6 0.0002 33.4 11.4 156 17-193 22-196 (256)
123 3qy7_A Tyrosine-protein phosph 88.4 1.8 6.3E-05 36.5 8.3 89 132-222 126-222 (262)
124 3b40_A PVDM, probable dipeptid 88.1 3.7 0.00013 37.2 10.6 60 100-163 194-265 (417)
125 3pnu_A Dihydroorotase; TIM bar 87.9 9.2 0.00031 33.7 12.9 141 97-238 134-318 (359)
126 2wje_A CPS4B, tyrosine-protein 87.1 5.2 0.00018 33.0 10.3 95 134-230 132-238 (247)
127 3neh_A Renal dipeptidase famil 86.7 7 0.00024 34.0 11.2 124 101-234 156-308 (318)
128 3bg3_A Pyruvate carboxylase, m 86.2 10 0.00035 36.8 13.0 100 38-140 224-335 (718)
129 1tx2_A DHPS, dihydropteroate s 85.8 6.2 0.00021 34.0 10.2 65 98-165 97-167 (297)
130 2bdq_A Copper homeostasis prot 85.5 14 0.00049 30.4 12.1 151 31-196 33-208 (224)
131 3iix_A Biotin synthetase, puta 85.2 2.3 7.7E-05 36.9 7.4 77 65-145 85-162 (348)
132 1r30_A Biotin synthase; SAM ra 84.0 15 0.00051 32.1 12.3 83 64-148 99-182 (369)
133 3ipw_A Hydrolase TATD family p 83.3 3.3 0.00011 36.2 7.5 141 40-195 54-222 (325)
134 3lab_A Putative KDPG (2-keto-3 83.1 5.5 0.00019 32.7 8.3 89 95-194 89-186 (217)
135 2w9m_A Polymerase X; SAXS, DNA 82.7 5.9 0.0002 37.3 9.5 87 130-222 444-542 (578)
136 3pm6_A Putative fructose-bisph 82.0 8.8 0.0003 33.2 9.5 142 45-196 76-253 (306)
137 3lmz_A Putative sugar isomeras 81.9 19 0.00066 29.2 11.8 92 16-120 43-134 (257)
138 3id7_A Dipeptidase; streptomyc 80.3 12 0.0004 33.7 10.1 132 100-235 172-367 (400)
139 1gvf_A Tagatose-bisphosphate a 80.3 2.8 9.7E-05 36.0 5.8 188 65-253 27-248 (286)
140 2qpx_A Predicted metal-depende 80.0 5.5 0.00019 35.3 7.9 134 100-238 205-372 (376)
141 3p6l_A Sugar phosphate isomera 79.6 19 0.00063 29.4 10.7 108 16-133 35-153 (262)
142 4hb7_A Dihydropteroate synthas 79.4 14 0.00049 31.3 9.9 59 102-163 71-131 (270)
143 3q58_A N-acetylmannosamine-6-p 79.1 25 0.00085 28.8 12.5 85 98-194 115-210 (229)
144 4h6q_A Proline dehydrogenase; 78.5 32 0.0011 29.7 14.1 167 32-199 38-235 (312)
145 3dcp_A Histidinol-phosphatase; 78.3 1.9 6.7E-05 36.8 4.2 49 148-197 209-259 (283)
146 2qf7_A Pyruvate carboxylase pr 78.1 19 0.00066 36.9 12.1 100 38-140 672-782 (1165)
147 3q94_A Fructose-bisphosphate a 76.3 5 0.00017 34.5 6.1 185 65-252 30-251 (288)
148 4gy7_A Urease; JACK bean, hydr 76.0 15 0.00051 36.3 10.2 74 39-121 449-522 (840)
149 2yxo_A Histidinol phosphatase; 75.5 4.4 0.00015 33.5 5.6 50 148-198 176-226 (267)
150 3n9r_A Fructose-bisphosphate a 75.0 40 0.0014 29.1 12.7 142 85-230 101-289 (307)
151 1m65_A Hypothetical protein YC 74.9 3.5 0.00012 33.7 4.7 86 135-224 125-220 (245)
152 3iwp_A Copper homeostasis prot 74.7 39 0.0013 28.8 13.8 164 9-192 51-235 (287)
153 3ngf_A AP endonuclease, family 73.1 37 0.0013 27.7 13.3 92 16-119 36-151 (269)
154 3noy_A 4-hydroxy-3-methylbut-2 73.0 22 0.00075 31.4 9.5 138 22-169 109-280 (366)
155 3p6l_A Sugar phosphate isomera 72.8 32 0.0011 27.8 10.4 86 27-120 15-113 (262)
156 3hbl_A Pyruvate carboxylase; T 72.1 38 0.0013 34.6 12.4 96 42-140 658-765 (1150)
157 3pm6_A Putative fructose-bisph 71.9 5.5 0.00019 34.5 5.3 188 65-253 36-267 (306)
158 3dxi_A Putative aldolase; TIM 71.6 5.1 0.00017 34.9 5.2 45 96-140 169-216 (320)
159 2y5s_A DHPS, dihydropteroate s 71.3 24 0.00083 30.2 9.3 63 99-165 81-148 (294)
160 3igs_A N-acetylmannosamine-6-p 71.1 41 0.0014 27.5 12.5 40 98-140 115-154 (232)
161 1x7f_A Outer surface protein; 70.9 20 0.0007 31.9 9.0 109 55-166 28-149 (385)
162 1f6y_A 5-methyltetrahydrofolat 69.9 47 0.0016 27.8 10.7 96 65-165 23-124 (262)
163 2dqw_A Dihydropteroate synthas 69.8 52 0.0018 28.1 11.5 103 101-210 92-211 (294)
164 4e38_A Keto-hydroxyglutarate-a 67.7 27 0.00091 28.8 8.5 57 123-191 94-150 (232)
165 2ki0_A DS119; beta-alpha-beta, 66.7 4.2 0.00014 22.5 2.2 22 96-117 12-33 (36)
166 3n9r_A Fructose-bisphosphate a 66.6 7.4 0.00025 33.7 5.0 97 65-162 26-133 (307)
167 3g8r_A Probable spore coat pol 66.2 32 0.0011 30.3 9.1 39 96-137 75-113 (350)
168 1rvg_A Fructose-1,6-bisphospha 66.1 6.5 0.00022 34.1 4.6 97 65-162 26-131 (305)
169 2gwg_A 4-oxalomesaconate hydra 66.1 10 0.00034 32.8 5.9 136 97-235 157-331 (350)
170 3tr9_A Dihydropteroate synthas 66.0 65 0.0022 27.8 11.4 61 101-165 93-156 (314)
171 2isw_A Putative fructose-1,6-b 65.6 13 0.00043 32.5 6.3 97 65-162 27-134 (323)
172 2q02_A Putative cytoplasmic pr 63.0 58 0.002 26.2 10.7 100 16-120 32-141 (272)
173 3c8f_A Pyruvate formate-lyase 62.8 22 0.00076 28.3 7.2 115 65-196 51-168 (245)
174 3q94_A Fructose-bisphosphate a 61.1 72 0.0025 27.1 10.2 34 106-139 200-233 (288)
175 2vp8_A Dihydropteroate synthas 60.8 40 0.0014 29.2 8.7 64 98-165 98-168 (318)
176 2p0o_A Hypothetical protein DU 59.3 28 0.00096 30.9 7.5 107 56-166 5-122 (372)
177 4inf_A Metal-dependent hydrola 59.3 20 0.00068 31.6 6.7 76 45-123 138-215 (373)
178 3nur_A Amidohydrolase; TIM bar 59.2 21 0.00073 31.2 6.8 74 46-122 121-196 (357)
179 3b0x_A DNA polymerase beta fam 58.8 6.5 0.00022 37.0 3.6 85 136-225 463-558 (575)
180 2y1h_A Putative deoxyribonucle 58.4 42 0.0014 27.4 8.3 142 40-195 22-191 (272)
181 2yci_X 5-methyltetrahydrofolat 57.5 71 0.0024 26.8 9.6 94 67-165 34-133 (271)
182 1vli_A Spore coat polysacchari 56.6 1.1E+02 0.0037 27.2 11.2 70 64-137 41-136 (385)
183 3hq1_A 2-isopropylmalate synth 56.5 1.2E+02 0.004 29.0 11.7 133 7-140 151-309 (644)
184 3qc0_A Sugar isomerase; TIM ba 56.1 51 0.0017 26.6 8.4 95 16-119 31-143 (275)
185 3obe_A Sugar phosphate isomera 56.1 40 0.0014 28.3 7.9 100 16-119 49-170 (305)
186 1mzh_A Deoxyribose-phosphate a 55.5 63 0.0022 26.1 8.7 28 112-140 175-202 (225)
187 4dzi_A Putative TIM-barrel met 54.8 29 0.00098 31.2 7.0 184 45-238 152-397 (423)
188 3vni_A Xylose isomerase domain 54.7 68 0.0023 26.2 9.1 203 16-234 30-284 (294)
189 2yx0_A Radical SAM enzyme; pre 54.6 1E+02 0.0034 26.3 11.2 114 85-214 145-262 (342)
190 3ovp_A Ribulose-phosphate 3-ep 54.4 86 0.0029 25.4 11.6 96 70-167 20-124 (228)
191 2vef_A Dihydropteroate synthas 53.7 77 0.0026 27.2 9.3 59 102-163 74-135 (314)
192 2wqp_A Polysialic acid capsule 52.4 1.2E+02 0.0041 26.5 10.4 69 64-136 32-125 (349)
193 1nfg_A D-hydantoinase; TIM bar 52.4 19 0.00064 31.9 5.4 87 96-192 159-258 (457)
194 1dos_A Aldolase class II; lyas 52.3 32 0.0011 30.3 6.7 39 85-123 141-179 (358)
195 3lye_A Oxaloacetate acetyl hyd 51.3 1E+02 0.0035 26.4 9.7 129 56-194 91-246 (307)
196 3dx5_A Uncharacterized protein 51.0 98 0.0033 25.1 9.6 143 16-162 28-198 (286)
197 1yx1_A Hypothetical protein PA 50.6 88 0.003 25.2 9.0 95 16-121 36-134 (264)
198 1zco_A 2-dehydro-3-deoxyphosph 49.8 1.1E+02 0.0038 25.4 12.6 55 64-120 34-95 (262)
199 1i60_A IOLI protein; beta barr 49.4 1E+02 0.0034 24.7 12.0 99 16-120 27-144 (278)
200 3u0h_A Xylose isomerase domain 49.3 1E+02 0.0035 24.8 9.5 99 16-120 29-143 (281)
201 2akz_A Gamma enolase, neural; 49.1 67 0.0023 29.0 8.5 25 99-123 350-376 (439)
202 1q7z_A 5-methyltetrahydrofolat 48.0 85 0.0029 29.3 9.3 79 84-166 356-440 (566)
203 1k77_A EC1530, hypothetical pr 46.7 1.1E+02 0.0037 24.4 13.0 94 16-120 28-145 (260)
204 1w6t_A Enolase; bacterial infe 46.7 1.6E+02 0.0055 26.3 10.9 45 98-142 360-406 (444)
205 2fym_A Enolase; RNA degradosom 46.2 1.2E+02 0.004 27.1 9.7 47 97-143 347-395 (431)
206 3e2v_A 3'-5'-exonuclease; stru 46.0 38 0.0013 30.4 6.2 38 40-81 40-77 (401)
207 2yw3_A 4-hydroxy-2-oxoglutarat 45.9 63 0.0021 25.8 7.1 36 124-160 72-107 (207)
208 2ekg_A Proline dehydrogenase/d 45.6 1.5E+02 0.0051 25.6 14.5 167 32-199 57-250 (327)
209 1zzm_A Putative deoxyribonucle 44.5 89 0.003 25.1 8.0 138 42-194 23-179 (259)
210 3elf_A Fructose-bisphosphate a 44.2 41 0.0014 29.6 6.0 39 85-123 128-166 (349)
211 1gvf_A Tagatose-bisphosphate a 43.9 57 0.0019 27.8 6.8 73 65-140 156-230 (286)
212 1vhc_A Putative KHG/KDPG aldol 43.8 1.3E+02 0.0044 24.3 9.5 113 58-190 20-132 (224)
213 3uj2_A Enolase 1; enzyme funct 43.7 1.6E+02 0.0054 26.7 10.1 25 99-123 371-397 (449)
214 3k13_A 5-methyltetrahydrofolat 43.4 1.5E+02 0.0053 25.2 10.5 96 65-165 35-141 (300)
215 3kws_A Putative sugar isomeras 42.9 1.3E+02 0.0046 24.3 11.4 95 16-120 51-167 (287)
216 2al1_A Enolase 1, 2-phospho-D- 42.9 93 0.0032 28.0 8.4 25 99-123 353-379 (436)
217 1wbh_A KHG/KDPG aldolase; lyas 42.5 1.3E+02 0.0044 24.1 9.4 93 59-160 20-112 (214)
218 3t7v_A Methylornithine synthas 42.1 91 0.0031 26.6 8.1 47 98-145 125-172 (350)
219 4d9a_A 2-pyrone-4,6-dicarbaxyl 41.6 1.5E+02 0.0053 24.7 13.2 151 83-239 119-295 (303)
220 2hk0_A D-psicose 3-epimerase; 41.4 1.5E+02 0.0051 24.4 9.4 99 16-120 49-172 (309)
221 3m9w_A D-xylose-binding peripl 41.4 1.4E+02 0.0049 24.3 9.9 80 84-163 4-89 (313)
222 3l23_A Sugar phosphate isomera 41.0 38 0.0013 28.4 5.3 97 16-120 42-167 (303)
223 2p10_A MLL9387 protein; putati 40.0 1.5E+02 0.0052 25.1 8.7 44 93-139 144-187 (286)
224 3jy6_A Transcriptional regulat 39.7 1.1E+02 0.0037 24.5 7.9 80 83-163 8-91 (276)
225 3kjx_A Transcriptional regulat 39.2 1.3E+02 0.0046 25.0 8.6 80 84-163 70-153 (344)
226 3tva_A Xylose isomerase domain 39.0 83 0.0028 25.7 7.1 139 16-162 34-211 (290)
227 3l6u_A ABC-type sugar transpor 38.8 97 0.0033 25.0 7.4 81 83-163 9-95 (293)
228 3k4h_A Putative transcriptiona 38.4 89 0.003 25.2 7.1 80 83-163 9-98 (292)
229 3m5v_A DHDPS, dihydrodipicolin 38.4 83 0.0028 26.6 7.1 29 95-123 56-88 (301)
230 3cpr_A Dihydrodipicolinate syn 38.0 1.5E+02 0.0051 25.1 8.6 74 65-138 35-114 (304)
231 2hzg_A Mandelate racemase/muco 37.7 89 0.003 27.5 7.4 21 58-78 198-220 (401)
232 3fkr_A L-2-keto-3-deoxyarabona 37.5 98 0.0034 26.3 7.4 42 38-79 29-73 (309)
233 3flu_A DHDPS, dihydrodipicolin 37.4 1.1E+02 0.0038 25.7 7.7 27 96-122 57-86 (297)
234 2inf_A URO-D, UPD, uroporphyri 37.3 1E+02 0.0036 26.5 7.7 94 101-198 233-329 (359)
235 3e61_A Putative transcriptiona 37.3 1E+02 0.0036 24.5 7.4 79 83-163 9-92 (277)
236 3egc_A Putative ribose operon 37.3 84 0.0029 25.4 6.8 81 83-163 9-93 (291)
237 2qul_A D-tagatose 3-epimerase; 37.2 1.5E+02 0.005 23.9 8.4 99 16-120 30-154 (290)
238 3tak_A DHDPS, dihydrodipicolin 37.2 1E+02 0.0036 25.8 7.5 12 143-154 141-152 (291)
239 1lt8_A Betaine-homocysteine me 37.0 46 0.0016 29.8 5.3 24 132-155 289-312 (406)
240 3kke_A LACI family transcripti 36.4 1.7E+02 0.0059 23.7 8.8 80 83-163 16-100 (303)
241 3l21_A DHDPS, dihydrodipicolin 36.2 1.1E+02 0.0037 26.0 7.4 28 95-122 64-94 (304)
242 3b3d_A YTBE protein, putative 35.9 2E+02 0.0068 24.3 10.6 154 63-226 122-296 (314)
243 3h5o_A Transcriptional regulat 35.7 1.9E+02 0.0065 24.0 9.2 81 83-163 63-147 (339)
244 3kcq_A Phosphoribosylglycinami 35.1 1.1E+02 0.0039 24.6 7.1 80 105-192 51-135 (215)
245 3uug_A Multiple sugar-binding 35.1 1.4E+02 0.0048 24.5 8.0 81 83-163 4-90 (330)
246 3cqj_A L-ribulose-5-phosphate 35.0 1.8E+02 0.0062 23.6 10.2 103 16-121 43-169 (295)
247 2ab1_A Hypothetical protein; H 34.9 51 0.0017 24.2 4.5 60 124-192 50-115 (122)
248 3qze_A DHDPS, dihydrodipicolin 34.6 1.2E+02 0.004 25.9 7.4 74 65-138 42-121 (314)
249 3zwt_A Dihydroorotate dehydrog 34.4 2.3E+02 0.008 24.7 11.0 133 3-140 163-325 (367)
250 2ehh_A DHDPS, dihydrodipicolin 34.3 1.1E+02 0.0039 25.6 7.2 41 38-78 21-64 (294)
251 1wj6_A KIAA0049 protein, RSGI 34.2 1.2E+02 0.0043 21.5 6.7 70 55-124 27-97 (101)
252 1xm3_A Thiazole biosynthesis p 34.1 2E+02 0.0067 23.7 14.1 170 4-195 26-208 (264)
253 3brq_A HTH-type transcriptiona 33.9 1.8E+02 0.0061 23.2 8.6 80 83-163 20-107 (296)
254 3tqp_A Enolase; energy metabol 33.8 2.6E+02 0.0089 25.0 10.4 129 2-139 216-387 (428)
255 3l49_A ABC sugar (ribose) tran 33.8 1.2E+02 0.0041 24.4 7.2 81 83-163 6-92 (291)
256 2bmb_A Folic acid synthesis pr 33.8 2.4E+02 0.0082 26.2 9.8 62 99-163 289-362 (545)
257 1xky_A Dihydrodipicolinate syn 33.4 1.4E+02 0.0048 25.2 7.7 27 96-122 62-91 (301)
258 2pcq_A Putative dihydrodipicol 33.4 42 0.0014 28.3 4.3 55 66-122 18-72 (283)
259 1mxs_A KDPG aldolase; 2-keto-3 33.1 1.9E+02 0.0065 23.3 8.5 35 125-160 88-122 (225)
260 3cny_A Inositol catabolism pro 33.0 1.9E+02 0.0067 23.3 8.8 134 16-162 44-216 (301)
261 3dz1_A Dihydrodipicolinate syn 32.9 1.1E+02 0.0037 26.1 6.9 43 38-80 29-74 (313)
262 3b4u_A Dihydrodipicolinate syn 32.8 1.2E+02 0.0043 25.4 7.3 17 236-252 273-289 (294)
263 1tv8_A MOAA, molybdenum cofact 32.7 2.2E+02 0.0076 23.9 10.9 87 64-154 50-139 (340)
264 3daq_A DHDPS, dihydrodipicolin 32.3 1.2E+02 0.0043 25.4 7.2 14 142-155 141-154 (292)
265 3kdn_A Rubisco, ribulose bisph 32.2 82 0.0028 28.6 6.2 104 2-120 169-283 (444)
266 3k40_A Aromatic-L-amino-acid d 32.1 86 0.0029 28.1 6.5 76 45-120 197-272 (475)
267 3lab_A Putative KDPG (2-keto-3 32.0 2E+02 0.0069 23.2 8.7 39 119-158 69-107 (217)
268 2wkj_A N-acetylneuraminate lya 31.9 1.3E+02 0.0046 25.3 7.3 28 95-122 60-90 (303)
269 2yxg_A DHDPS, dihydrodipicolin 31.9 1.2E+02 0.0042 25.3 7.0 13 142-154 139-151 (289)
270 3si9_A DHDPS, dihydrodipicolin 31.7 1.1E+02 0.0039 26.0 6.9 74 65-138 41-120 (315)
271 3o74_A Fructose transport syst 31.6 1.4E+02 0.0046 23.7 7.1 80 84-163 4-88 (272)
272 3d8u_A PURR transcriptional re 31.5 1.1E+02 0.0037 24.4 6.5 64 99-163 20-88 (275)
273 2pa6_A Enolase; glycolysis, ly 31.4 2.7E+02 0.0094 24.5 10.1 26 98-123 346-373 (427)
274 1bwv_A Rubisco, protein (ribul 31.1 1.6E+02 0.0054 27.1 7.9 104 2-120 190-304 (493)
275 3ih1_A Methylisocitrate lyase; 30.7 2.3E+02 0.0078 24.2 8.5 146 34-194 72-242 (305)
276 3qfe_A Putative dihydrodipicol 30.6 1.3E+02 0.0043 25.8 7.0 15 236-250 295-309 (318)
277 2v9d_A YAGE; dihydrodipicolini 30.4 1.6E+02 0.0053 25.5 7.6 74 65-138 50-129 (343)
278 3a5f_A Dihydrodipicolinate syn 30.3 1.5E+02 0.0051 24.8 7.3 41 38-78 22-65 (291)
279 2ojp_A DHDPS, dihydrodipicolin 30.3 1.7E+02 0.0058 24.5 7.7 28 95-122 50-80 (292)
280 3e3m_A Transcriptional regulat 29.6 1.6E+02 0.0054 24.7 7.5 81 83-163 71-155 (355)
281 1rvg_A Fructose-1,6-bisphospha 29.5 1.8E+02 0.0061 24.9 7.6 91 65-159 154-248 (305)
282 2r8w_A AGR_C_1641P; APC7498, d 29.2 1.5E+02 0.0052 25.4 7.3 74 65-138 53-132 (332)
283 3na8_A Putative dihydrodipicol 29.1 1.2E+02 0.004 25.9 6.5 74 65-138 43-122 (315)
284 1o5k_A DHDPS, dihydrodipicolin 29.1 1.4E+02 0.0047 25.3 6.9 12 143-154 152-163 (306)
285 2fep_A Catabolite control prot 29.1 1.9E+02 0.0064 23.3 7.7 80 83-163 17-101 (289)
286 4dpp_A DHDPS 2, dihydrodipicol 29.0 1.7E+02 0.0058 25.6 7.6 75 65-139 78-158 (360)
287 2h9a_B CO dehydrogenase/acetyl 29.0 2E+02 0.0068 24.6 7.9 101 84-190 90-200 (310)
288 3bqs_A Uncharacterized protein 28.9 29 0.00098 24.3 2.1 38 218-255 50-89 (93)
289 3gv0_A Transcriptional regulat 28.7 1.9E+02 0.0064 23.3 7.6 82 82-163 8-95 (288)
290 3nwr_A A rubisco-like protein; 28.7 1.1E+02 0.0038 27.6 6.4 101 2-120 175-286 (432)
291 1wv2_A Thiazole moeity, thiazo 28.7 2.6E+02 0.0089 23.4 13.1 131 54-195 74-217 (265)
292 4ep8_C Urease subunit alpha; a 28.6 24 0.00083 32.6 2.1 59 181-239 344-419 (566)
293 3s5o_A 4-hydroxy-2-oxoglutarat 28.4 1.4E+02 0.0047 25.3 6.8 10 188-197 196-205 (307)
294 3p9x_A Phosphoribosylglycinami 27.7 2.1E+02 0.007 23.0 7.4 82 103-192 43-134 (211)
295 1n7k_A Deoxyribose-phosphate a 27.4 2E+02 0.0067 23.5 7.3 39 43-82 125-163 (234)
296 2rgy_A Transcriptional regulat 27.4 1.9E+02 0.0064 23.3 7.4 81 83-163 9-96 (290)
297 3bbl_A Regulatory protein of L 27.3 2.4E+02 0.0082 22.6 9.0 65 99-163 25-93 (287)
298 1f6k_A N-acetylneuraminate lya 27.1 1.6E+02 0.0055 24.6 7.0 14 142-155 143-156 (293)
299 2ftp_A Hydroxymethylglutaryl-C 27.1 2.8E+02 0.0094 23.2 13.3 133 99-238 124-290 (302)
300 4djd_D C/Fe-SP, corrinoid/iron 27.1 3E+02 0.01 23.6 9.3 101 84-190 97-207 (323)
301 3tb6_A Arabinose metabolism tr 26.9 2.4E+02 0.0082 22.4 9.1 81 83-163 16-105 (298)
302 2hmc_A AGR_L_411P, dihydrodipi 26.8 1.9E+02 0.0066 25.0 7.5 75 65-139 45-122 (344)
303 3av3_A Phosphoribosylglycinami 26.5 2E+02 0.007 22.8 7.2 82 103-192 44-135 (212)
304 1i4n_A Indole-3-glycerol phosp 26.5 93 0.0032 25.8 5.2 41 97-140 135-176 (251)
305 3g1w_A Sugar ABC transporter; 26.3 2.5E+02 0.0087 22.5 8.2 65 99-163 21-92 (305)
306 2fi9_A Outer membrane protein; 25.8 59 0.002 24.0 3.4 45 124-168 55-106 (128)
307 2rfg_A Dihydrodipicolinate syn 25.4 1.4E+02 0.0048 25.1 6.3 14 142-155 139-152 (297)
308 3ksm_A ABC-type sugar transpor 25.4 2.4E+02 0.0083 22.1 7.6 65 99-163 17-90 (276)
309 2d69_A Ribulose bisphosphate c 25.4 92 0.0031 28.1 5.2 107 2-120 166-280 (430)
310 1dlw_A Hemoglobin; oxygen stor 25.3 1.5E+02 0.0053 20.7 5.7 45 210-254 65-112 (116)
311 3l12_A Putative glycerophospho 25.3 1.3E+02 0.0045 25.3 6.1 35 103-139 259-293 (313)
312 3c8f_A Pyruvate formate-lyase 25.2 2.3E+02 0.008 21.9 7.4 17 99-115 227-243 (245)
313 1tv5_A Dhodehase, dihydroorota 25.2 3.7E+02 0.013 24.1 12.5 26 3-28 196-222 (443)
314 2zds_A Putative DNA-binding pr 25.2 74 0.0025 26.6 4.5 42 16-57 28-70 (340)
315 1wdd_A Ribulose bisphosphate c 25.0 1.3E+02 0.0043 27.6 6.1 111 2-120 181-296 (477)
316 4a29_A Engineered retro-aldol 24.8 1.1E+02 0.0038 25.6 5.3 41 97-140 138-178 (258)
317 3huu_A Transcription regulator 24.7 1.2E+02 0.0039 24.8 5.6 65 99-163 44-112 (305)
318 3tsm_A IGPS, indole-3-glycerol 24.7 1E+02 0.0036 25.8 5.2 41 97-140 154-194 (272)
319 1olt_A Oxygen-independent copr 24.5 2.9E+02 0.0098 24.6 8.5 71 84-154 105-183 (457)
320 1js3_A DDC;, DOPA decarboxylas 24.4 1.4E+02 0.0047 26.5 6.4 74 45-119 197-272 (486)
321 1dbq_A Purine repressor; trans 24.4 2.4E+02 0.0082 22.4 7.5 80 83-163 8-93 (289)
322 3gbv_A Putative LACI-family tr 24.4 2E+02 0.0068 23.1 7.0 74 38-118 26-100 (304)
323 4f0h_A Ribulose bisphosphate c 24.3 2.2E+02 0.0077 26.1 7.6 104 2-120 190-304 (493)
324 2fiq_A Putative tagatose 6-pho 24.0 2.1E+02 0.0073 25.6 7.4 75 65-139 23-121 (420)
325 3lmz_A Putative sugar isomeras 24.0 1.5E+02 0.0051 23.6 6.1 18 97-114 87-104 (257)
326 1em9_A GAG polyprotein capsid 23.7 1.4E+02 0.0049 22.8 5.2 39 190-228 1-58 (154)
327 4e1o_A HDC, histidine decarbox 23.6 1.5E+02 0.005 26.5 6.4 72 49-120 207-279 (481)
328 2isw_A Putative fructose-1,6-b 23.6 1.7E+02 0.0059 25.2 6.4 91 65-159 154-250 (323)
329 3rot_A ABC sugar transporter, 23.3 2.6E+02 0.0088 22.5 7.5 65 99-163 20-92 (297)
330 3clk_A Transcription regulator 23.1 2.1E+02 0.0071 22.9 6.8 81 83-163 9-94 (290)
331 3mab_A Uncharacterized protein 23.0 97 0.0033 21.6 3.9 37 217-253 49-87 (93)
332 4djd_C C/Fe-SP, corrinoid/iron 23.0 4.1E+02 0.014 24.0 9.0 134 47-190 85-227 (446)
333 4dhx_B Enhancer of yellow 2 tr 22.9 2E+02 0.007 20.2 7.7 49 205-254 42-97 (101)
334 3cs3_A Sugar-binding transcrip 22.9 2.1E+02 0.007 22.8 6.7 77 83-163 9-86 (277)
335 2vc6_A MOSA, dihydrodipicolina 22.9 1.5E+02 0.0052 24.8 6.0 13 143-155 140-152 (292)
336 2o20_A Catabolite control prot 22.8 2.4E+02 0.0081 23.3 7.3 81 83-163 64-148 (332)
337 2gm2_A Conserved hypothetical 22.8 45 0.0016 24.8 2.3 44 125-168 54-102 (132)
338 3ble_A Citramalate synthase fr 22.8 3.6E+02 0.012 23.0 10.7 130 99-234 137-291 (337)
339 3can_A Pyruvate-formate lyase- 22.6 1.7E+02 0.0057 22.1 5.8 45 88-132 8-52 (182)
340 2r91_A 2-keto-3-deoxy-(6-phosp 22.6 2.5E+02 0.0086 23.3 7.3 22 236-257 265-286 (286)
341 3okp_A GDP-mannose-dependent a 22.6 3.3E+02 0.011 22.5 12.0 96 99-199 214-313 (394)
342 2fvt_A Conserved hypothetical 22.5 97 0.0033 23.1 4.1 44 125-168 55-105 (135)
343 3h5d_A DHDPS, dihydrodipicolin 21.9 2.2E+02 0.0074 24.1 6.8 42 38-79 28-72 (311)
344 3gk0_A PNP synthase, pyridoxin 21.6 3.6E+02 0.012 22.7 8.8 41 98-140 141-181 (278)
345 3qk7_A Transcriptional regulat 21.5 2.5E+02 0.0085 22.6 7.0 65 99-163 27-94 (294)
346 3fa4_A 2,3-dimethylmalate lyas 21.5 2.5E+02 0.0086 23.9 7.0 56 133-195 181-239 (302)
347 3o1i_D Periplasmic protein TOR 21.0 1.4E+02 0.0049 24.0 5.4 79 84-163 7-93 (304)
348 2iuy_A Avigt4, glycosyltransfe 21.0 3.4E+02 0.012 22.1 9.2 93 101-198 177-274 (342)
349 3mcm_A 2-amino-4-hydroxy-6-hyd 20.9 3.1E+02 0.011 24.7 7.8 63 99-165 247-323 (442)
350 3rfa_A Ribosomal RNA large sub 20.9 2.8E+02 0.0097 24.6 7.5 87 33-119 251-345 (404)
351 3m9w_A D-xylose-binding peripl 20.3 3E+02 0.01 22.2 7.4 71 38-118 19-89 (313)
No 1
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=100.00 E-value=4.9e-54 Score=387.31 Aligned_cols=239 Identities=19% Similarity=0.256 Sum_probs=225.1
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHh----hcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccC
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDAC----NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSG 91 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~----~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g 91 (257)
||+|+|+||+|+.|+.+|++.+++++.+. ++.+++||++++|+|++|+.+++.+.+.++++.+| .++++|+|++|
T Consensus 94 gV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~l~~a~~~-~~~vvG~dL~g 172 (343)
T 3rys_A 94 GVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDSALEVLDQLLAM-HAPIAGIGLDS 172 (343)
T ss_dssp TEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTSCHHHHHHHHHHHHHT-TCCCCEEEEES
T ss_pred CCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCCCHHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 69999999999999999999999887665 45567899999999999999999999999999998 45699999999
Q ss_pred CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCcEEeeccccc--HHHHHHHhcCCCcEEecccccc
Q 025169 92 NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCFE--EEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~ri~Hg~~l~--~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
+|..+|++.|+++++.|++.|+++++|+||+.++.++.+++. +|++||+||+++. |+++++|+++||++++||+||+
T Consensus 173 ~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~ 252 (343)
T 3rys_A 173 AEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNV 252 (343)
T ss_dssp CCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcceeeeeeeecCChHHHHHHHhcCCCeeEchhHHH
Confidence 999999999999999999999999999999998899999997 8999999999994 6899999999999999999999
Q ss_pred eeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 025169 169 RTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKEIF 248 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~~n~~~~~~~~~~~k~~l~~~~ 248 (257)
+++.+++++.||+++|+++||+|+||||||++|+++|++||+.++..+|+|.+++.++++||+++||+++++|++|+++|
T Consensus 253 ~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~E~~~a~~~~~l~~~~l~~l~~nsi~~sf~~~~~K~~l~~~~ 332 (343)
T 3rys_A 253 RLRAVDKLADHPLPEMLAIGLNVCVNSDDPAYFGGYVDDNFEQLVKVLEFSVPEQATLAANSIRSSFASDARKAVLLDEV 332 (343)
T ss_dssp HTTSSSCGGGCSHHHHHHTTCCEEECCBSTTTTTCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHHH
T ss_pred HhCCCCCcccchHHHHHHCCCeEEEeCCCccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 99998888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 025169 249 DLAEKKL 255 (257)
Q Consensus 249 ~~~~~~~ 255 (257)
++.....
T Consensus 333 ~~~~~~~ 339 (343)
T 3rys_A 333 TEWVKAS 339 (343)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9987654
No 2
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=100.00 E-value=1.9e-54 Score=394.49 Aligned_cols=240 Identities=18% Similarity=0.201 Sum_probs=224.4
Q ss_pred ccceeeeeccCccccc-cCCCchhhhhhHh----hcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEecc
Q 025169 16 AVSAVDVDFASRSIDV-RRPVNTKNMNDAC----NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLS 90 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~-~~~~~~~~~~~~~----~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~ 90 (257)
||+|+|+||+|+.|+. +|++.+++++++. ++.+++||.+++|+|++|+.+++.+.+.++++.++++++|+|||++
T Consensus 109 gV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~VvG~dL~ 188 (380)
T 4gxw_A 109 NVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGID 188 (380)
T ss_dssp TEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTSCHHHHHHHHHHHHHTCCTTBCEEEEE
T ss_pred CCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCHHHHHHHHHHHHHhCCCCEEEEeec
Confidence 6999999999999986 8999999887765 5677889999999999999999999999999999998889999999
Q ss_pred CCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCH-hhHHHHHh-cCCcEEeecccc--cHHHHHHHhcCCCcEEecccc
Q 025169 91 GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK-EEIQSMLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVEICLTS 166 (257)
Q Consensus 91 g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~-~~i~~~l~-lg~~ri~Hg~~l--~~~~~~~l~~~~i~v~~cP~S 166 (257)
|+|..+++..|.++|+.||+.|+++|+||||..++ ++++++++ +|++|||||+.+ +|++++++++++|++++||+|
T Consensus 189 g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga~RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~S 268 (380)
T 4gxw_A 189 YRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVDRVDHGYTIVDNPELCARYAERGIVFTVVPTN 268 (380)
T ss_dssp SCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCCSEEEECGGGGGCHHHHHHHHHHTCEEEECTTC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCCcccccceeeccChHHHHHHHHhCceeEECCcc
Confidence 99999999999999999999999999999998765 68999996 799999999988 789999999999999999999
Q ss_pred cceeccccC---CCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChHHHHH
Q 025169 167 NIRTETISS---LDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKED 243 (257)
Q Consensus 167 N~~l~~~~~---~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~~n~~~~~~~~~~~k~~ 243 (257)
|.+++.+++ +..||++.|+++|++|+||||||++|+++|++||..+++.+|++.+|+.++++||+++||+++++|++
T Consensus 269 N~~l~~v~~~~~~~~HP~~~l~~~Gv~vtinTDDp~~f~t~Ls~Ey~~~~~~~gls~~dl~~l~~nsi~~sF~~~~~K~~ 348 (380)
T 4gxw_A 269 SYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLHKVNPSEAWELMFSHFGFTIADLKQFMLNGIDGAWVDDDTKAA 348 (380)
T ss_dssp HHHHHHSCTTTHHHHCGGGGTGGGTCEEEECCBSHHHHTCCHHHHHHHHHHTSCCCHHHHHHHHHHHHHHSSSCHHHHHH
T ss_pred hhhhcccccccccccChHHHHHHCCCeEEECCCCchhhCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999998765 56799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 025169 244 LKEIFDLAEKKL 255 (257)
Q Consensus 244 l~~~~~~~~~~~ 255 (257)
|+++|.+.+.++
T Consensus 349 l~~~~~~~~d~~ 360 (380)
T 4gxw_A 349 WRAAWAPEFDML 360 (380)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998877654
No 3
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=100.00 E-value=1.4e-52 Score=380.61 Aligned_cols=238 Identities=22% Similarity=0.305 Sum_probs=221.5
Q ss_pred ccceeeeeccCcccccc------------CCCchhhhhhHh----hcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhh
Q 025169 16 AVSAVDVDFASRSIDVR------------RPVNTKNMNDAC----NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEM 79 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~------------~~~~~~~~~~~~----~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~ 79 (257)
||+|+|+||+|+.|+.+ |++.+++++.+. ++.+++||++++|+|++|+.+ +.+.+.++++.+|
T Consensus 91 gV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~R~~~-~~a~e~~~la~~~ 169 (367)
T 3iar_A 91 GVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCCMRHQP-NWSPKVVELCKKY 169 (367)
T ss_dssp TEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTCG-GGHHHHHHHHHHT
T ss_pred CCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeCCCCC-HHHHHHHHHHHhh
Confidence 69999999999999977 799998887665 456778999999999999875 4578899999999
Q ss_pred CCCceEEEeccCCCCCCCh---hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCcEEeecccc--cHHHHHHH
Q 025169 80 RDLGVVGIDLSGNPTKGEW---TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCF--EEEEWRKL 153 (257)
Q Consensus 80 ~~~~vvg~~l~g~~~~~~~---~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~ri~Hg~~l--~~~~~~~l 153 (257)
++++++|||++|+|..+++ +.|.++++.|++.|+++++|+||+.+++++.+++. +|++||+||+++ +|+++++|
T Consensus 170 ~~~~vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~RIgHgv~l~~d~~l~~~l 249 (367)
T 3iar_A 170 QQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQALYNRL 249 (367)
T ss_dssp TTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHTSCCSEEEECGGGGGCHHHHHHH
T ss_pred CCCCEEEEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHHccCCceeeeeeeecCCHHHHHHH
Confidence 8888999999999988887 78999999999999999999999999889999995 899999999998 57899999
Q ss_pred hcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 025169 154 KSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKF 233 (257)
Q Consensus 154 ~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~~n~~~~ 233 (257)
+++||++++||+||++++.++++..||+++|+++||+|+||||||++|+++|++||..++..+|++.+++.++++||+++
T Consensus 250 ~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~~~~l~~e~~~a~~~~glt~~el~~l~~nsi~~ 329 (367)
T 3iar_A 250 RQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTKRDMGFTEEEFKRLNINAAKS 329 (367)
T ss_dssp HHTTCEEEECHHHHHHTSSSCTTSCCHHHHHHHTTCCEEECCBSHHHHTCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHT
T ss_pred HhCCcEEEECHHHHHHhCCCCCcccChHHHHHHCCCEEEECCCCccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHhh
Q 025169 234 IFANGRVKEDLKEIFDLAEKK 254 (257)
Q Consensus 234 ~~~~~~~k~~l~~~~~~~~~~ 254 (257)
||+++++|++|+++|++.+.+
T Consensus 330 sf~~~~~K~~l~~~~~~~~~~ 350 (367)
T 3iar_A 330 SFLPEDEKRELLDLLYKAYGM 350 (367)
T ss_dssp SSSCHHHHHHHHHHHHHHHTC
T ss_pred hCCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999988765
No 4
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=100.00 E-value=4.4e-51 Score=365.88 Aligned_cols=223 Identities=22% Similarity=0.285 Sum_probs=207.5
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHh----hcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccC
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDAC----NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSG 91 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~----~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g 91 (257)
||+|+|+||+|+.|+.+|++.+++++.+. ++.+++||++++|+|++|+.+++.+.+.++++.+|++ +++|||++|
T Consensus 91 gV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~~~~a~~~~~-~vvG~dL~g 169 (326)
T 3pao_A 91 NVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFRD-AFIAVGLDS 169 (326)
T ss_dssp TEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEETTSCHHHHHHHHHHHGGGGG-GCSEEEEES
T ss_pred CCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeCCCCCHHHHHHHHHHHhhccc-cceeeCCCC
Confidence 69999999999999999999999877655 4567789999999999999999999999999999876 799999999
Q ss_pred CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCcEEeeccccc--HHHHHHHhcCCCcEEecccccc
Q 025169 92 NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCFE--EEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~ri~Hg~~l~--~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
+|..+|++.|+++++.|++.|+++++|+||+.+++++.++++ +|++||+||++++ |+++++|+++||++++||+||+
T Consensus 170 ~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~ 249 (326)
T 3pao_A 170 SEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNT 249 (326)
T ss_dssp CCTTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCCSSEEECGGGGGCHHHHHHHHHHTCCEEECHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCCceeeeeeeecccHHHHHHHHHcCCeEEECchhHH
Confidence 998899999999999999999999999999988899999995 8999999999996 7899999999999999999999
Q ss_pred eeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChH
Q 025169 169 RTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGR 239 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~~n~~~~~~~~~~ 239 (257)
+++.+++++.||+++|+++||+|+||||||++|+++|++||+.+++.+|++.+++.++++||+++||+++.
T Consensus 250 ~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~e~~~a~~~~~l~~~~l~~l~~nsi~~sf~~~~ 320 (326)
T 3pao_A 250 KLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVKEG 320 (326)
T ss_dssp HTTSSSSGGGCCHHHHHHHTCCEEECCBSHHHHTCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHTCC----
T ss_pred HhCCCCCcccChHHHHHHCCCeEEEeCCCcccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999874
No 5
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=100.00 E-value=1.2e-47 Score=359.55 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=219.1
Q ss_pred HHHHHHHHHhh--ccceeeeec--cCccccc-cCCCchhhhhhHh----hcccCCC--cEEEEEEEeeCCCCHHHHHHHH
Q 025169 5 SYMDAVVEGLR--AVSAVDVDF--ASRSIDV-RRPVNTKNMNDAC----NGTRGKK--IYVRLLLSIDRRETTEAAMETV 73 (257)
Q Consensus 5 ~y~~~~~~~~~--~v~y~E~r~--~p~~~~~-~~~~~~~~~~~~~----~a~~~~g--ir~~li~~~~r~~~~e~~~~~~ 73 (257)
.|+..+++.+. ||+|+|+|+ .|..+.. +|++.+++++.+. ++.++.| |.+++|+|++|+.+++.+.+.+
T Consensus 200 ~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~~~R~~~~e~a~e~l 279 (508)
T 3lgd_A 200 DYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDHRSKDVAVIAESI 279 (508)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEEecCCCCHHHHHHHH
Confidence 44555555544 699999995 4655543 4688888887765 3445566 9999999999999999999999
Q ss_pred HHHHhhC---CCceEEEeccCCCC-CCChhcHHHHHHH--HHHcCCceeeecCCCCC-----HhhHHHHHhcCCcEEeec
Q 025169 74 KLALEMR---DLGVVGIDLSGNPT-KGEWTTFLPALKF--AREQGLQITLHCGEIPN-----KEEIQSMLDFLPQRIGHA 142 (257)
Q Consensus 74 ~~~~~~~---~~~vvg~~l~g~~~-~~~~~~~~~~~~~--A~~~gl~v~~Ha~E~~~-----~~~i~~~l~lg~~ri~Hg 142 (257)
+++.+++ .++++||||+|+|. ..|+..|.++++. |++.|+++++||||..+ ++++.+++.+|++|||||
T Consensus 280 ~~a~~~~~~~~~~VvG~DLaG~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~Lga~RIgHG 359 (508)
T 3lgd_A 280 RMAMGLRIKFPTVVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGHG 359 (508)
T ss_dssp HHHHHHHHHCTTTEEEEEEESCTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSEEEC
T ss_pred HHHHHHHhhCCCceEEeccCCCCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHhcCCceeeee
Confidence 9999885 45799999999875 5678999999999 89999999999999853 467889998999999999
Q ss_pred ccc--cHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCC-ChHHHHHHHHHhCCC-
Q 025169 143 CCF--EEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFST-SVSREYDLAASAFSL- 218 (257)
Q Consensus 143 ~~l--~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~-~l~~E~~~a~~~~~l- 218 (257)
+.+ +|++++++++++|++++||+||++++.++++..||++.|+++|++|+||||||++|++ +|++||..++..+++
T Consensus 360 v~l~~dp~l~~~l~~~~I~levCP~SN~~l~~v~~~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~~Ls~Ey~~a~~~~~~~ 439 (508)
T 3lgd_A 360 FALSKHPAVRTYSWKKDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEVFMGIGGM 439 (508)
T ss_dssp TTGGGCHHHHHHHHHTTCCEEECHHHHHHTTSCSSGGGCTHHHHHHTTCCEEECCBSHHHHTCCTTHHHHHHHHHTTSCT
T ss_pred EecCccHHHHHHHHhcCCeEEECcchHHHhCCCCCcccChHHHHHHCCCcEEEcCCCccccCCCchHHHHHHHHHHcccC
Confidence 999 4899999999999999999999999998888999999999999999999999999996 699999999887765
Q ss_pred --CHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhhc
Q 025169 219 --GRREMFQLAKSAVKFIFANGRVKEDLKEIFDLAEKKL 255 (257)
Q Consensus 219 --s~~~v~~~~~n~~~~~~~~~~~k~~l~~~~~~~~~~~ 255 (257)
+.+++.++++||+++||+++++|++|+++|++...++
T Consensus 440 ~~~~~~l~~La~NSi~~Sfl~~~eK~~ll~~~~~~~~~f 478 (508)
T 3lgd_A 440 KADLRTLKQLAMNSIKYSTLLESEKNTFMEIWKKRWDKF 478 (508)
T ss_dssp TCCHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999987764
No 6
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=100.00 E-value=2.9e-46 Score=340.63 Aligned_cols=236 Identities=20% Similarity=0.330 Sum_probs=210.9
Q ss_pred HHHHhh-ccceeeeeccCcc-ccccCCCchhhhhhHh----hcccCC--CcEEEEEEEeeCCCCHHHHHHHHHHHHhhCC
Q 025169 10 VVEGLR-AVSAVDVDFASRS-IDVRRPVNTKNMNDAC----NGTRGK--KIYVRLLLSIDRRETTEAAMETVKLALEMRD 81 (257)
Q Consensus 10 ~~~~~~-~v~y~E~r~~p~~-~~~~~~~~~~~~~~~~----~a~~~~--gir~~li~~~~r~~~~e~~~~~~~~~~~~~~ 81 (257)
+.+.+. +|.|+|+|++|+. |+..|++.++.++.+. ++.+++ ||++++++|++|+.+++.+.+.++.+.+ .+
T Consensus 121 l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r~~~~~~~~~~~~~a~~-~~ 199 (371)
T 2pgf_A 121 VFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHEAANIKASADFCLK-HK 199 (371)
T ss_dssp HHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEESSTTCCHHHHHHHHHH-TT
T ss_pred HHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCHHHHHHHHHHHHh-CC
Confidence 344444 5999999999987 8999999998877555 455678 9999999999998777778888888887 55
Q ss_pred CceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCC--CCH-hhHHHHHh-cCCcEEeecccccH--HHHHHHhc
Q 025169 82 LGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEI--PNK-EEIQSMLD-FLPQRIGHACCFEE--EEWRKLKS 155 (257)
Q Consensus 82 ~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~--~~~-~~i~~~l~-lg~~ri~Hg~~l~~--~~~~~l~~ 155 (257)
++++|+|++|++.. ++.|+++++.|+++|+++++|++|+ .++ .++.+++. +|++||+||+++++ +++++|++
T Consensus 200 ~~vvg~dl~g~e~~--~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~lg~~ri~Hgv~l~~~~~l~~~l~~ 277 (371)
T 2pgf_A 200 ADFVGFDHGGHEVD--LKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVLKVERIGHGIRVAESQELIDMVKE 277 (371)
T ss_dssp TTEEEEEEEESCCC--GGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTSCCSEEEECGGGGGCHHHHHHHHH
T ss_pred CCEEEEecCCCccc--HHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhccCCCEEecchhccccHHHHHHHHH
Confidence 67999999997755 8899999999999999999999998 666 78888887 49999999999954 45999999
Q ss_pred CCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 025169 156 SKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLAKSAVKFIF 235 (257)
Q Consensus 156 ~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~~n~~~~~~ 235 (257)
+||++++||+||++++.+++++.||+++|+++||+|+||||||++++++|++||+.++..++++.+++.++++||++++|
T Consensus 278 ~~i~v~~cP~SN~~l~~~~~~~~~pi~~ll~~Gv~V~lgTD~~~~~~~~l~~e~~~a~~~~~l~~~~l~~lt~ns~~asf 357 (371)
T 2pgf_A 278 KNILLEVCPISNVLLKNAKSMDTHPIRQLYDAGVKVSVNSDDPGMFLTNINDDYEELYTHLNFTLEDFMKMNEWALEKSF 357 (371)
T ss_dssp TTCEEEECHHHHHHTTSSSCGGGCTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
T ss_pred cCCeEEECcchhHHhCCCCccccChHHHHHHCCCeEEEeCCCCcccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHc
Confidence 99999999999999998777788999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHH
Q 025169 236 ANGRVKEDLKEIF 248 (257)
Q Consensus 236 ~~~~~k~~l~~~~ 248 (257)
+++++|++|++++
T Consensus 358 ~~~~~K~~l~~~~ 370 (371)
T 2pgf_A 358 MDSNIKDKIKNLY 370 (371)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhh
Confidence 9999999999876
No 7
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=100.00 E-value=2.6e-39 Score=311.77 Aligned_cols=236 Identities=17% Similarity=0.132 Sum_probs=187.3
Q ss_pred HHHHHHhh--ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHH-------------
Q 025169 8 DAVVEGLR--AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMET------------- 72 (257)
Q Consensus 8 ~~~~~~~~--~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~------------- 72 (257)
..|++.+. +|+|+|+|++| |...+...+++++.+.++. ..++.+++++++.|..++..+.+.
T Consensus 358 ~evled~a~dgV~Y~ElR~sp--~~~~~~~~~~l~~~v~~~~-~~~~~vr~ii~i~R~~~~~~a~~~v~~F~~~l~nIF~ 434 (701)
T 2a3l_A 358 KQVFSDLEASKYQMAEYRISI--YGRKMSEWDQLASWIVNND-LYSENVVWLIQLPRLYNIYKDMGIVTSFQNILDNIFI 434 (701)
T ss_dssp HHHHHHHTTSSSEEEEEEEEC--CSSSSTHHHHHHHHHHTTT-CCCSSEEEEEEEECCHHHHTTSSSCSSTHHHHHHHSS
T ss_pred HHHHHHHHHcCCeEEEEEecc--ccCCCCcHHHHHHHHHhcC-ccCcceEEEEEeecccCHHHhcChHHHHHHHHHhhhh
Confidence 34444444 59999999999 4555666666666655543 448999999999997555432221
Q ss_pred --HHH--------HHhhCCCceEEEeccCCCCCC---------ChhcH----H--------------HHHHHHHH-cCC-
Q 025169 73 --VKL--------ALEMRDLGVVGIDLSGNPTKG---------EWTTF----L--------------PALKFARE-QGL- 113 (257)
Q Consensus 73 --~~~--------~~~~~~~~vvg~~l~g~~~~~---------~~~~~----~--------------~~~~~A~~-~gl- 113 (257)
++. +.++..++|+|||++|+|... +|+.+ . ..+..||+ .|+
T Consensus 435 PL~e~t~~p~~~~~l~~~~~~VvGfDL~G~E~~~~~~~~~~~~pp~~~~~~f~p~~~yy~Yy~yan~~~Ln~ar~~~Gl~ 514 (701)
T 2a3l_A 435 PLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMT 514 (701)
T ss_dssp HHHHHHHCGGGSTTTHHHHTTEEEEEEESCTTSCCCCCCSSCCCTTTCCSSSCCCHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHhhcCcccCHHHHhcCCCEEEEEeecCCCcccccccccCCChHHcccccccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 111 112233469999999987654 33332 2 23446775 687
Q ss_pred --ceeeecCCCCCHhhHHHHHhcCCcEEeeccccc--HHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCC
Q 025169 114 --QITLHCGEIPNKEEIQSMLDFLPQRIGHACCFE--EEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQH 189 (257)
Q Consensus 114 --~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~--~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv 189 (257)
++++|+||+.+++.+.+++ +|++||+||+++. |.++++++++||++++||+||+++ ++++..||+++|+++||
T Consensus 515 ~i~~t~HaGE~~~~e~l~~al-Lg~~RIgHGv~l~edp~Li~lla~~~I~vevCP~SN~kl--~~~~~~HPi~~ll~~Gv 591 (701)
T 2a3l_A 515 TITLRPHSGEAGDIDHLAATF-LTCHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSL--FLDYHRNPFPVFFLRGL 591 (701)
T ss_dssp CCEECCCCSSSSCTHHHHHHH-HHCSSCSCCGGGGGCHHHHHHHHHHTCCEEECHHHHTTT--TCCSTTCSHHHHHHTTC
T ss_pred CCCcccccCCCCCHHHHHHHh-cCCCeEEEEeecccCHHHHHHHHHcCCcEEECccchhhh--ccCchHhHHHHHHHCCC
Confidence 8999999998888898888 9999999999995 456999999999999999999955 45678899999999999
Q ss_pred CEEecCCCCCCCCC---ChHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 025169 190 PLVLCTDDSGVFST---SVSREYDLAASAFSLGRREMFQLAKSAVKFIFANGRVKEDLKEIFD 249 (257)
Q Consensus 190 ~v~lgTD~~~~~~~---~l~~E~~~a~~~~~ls~~~v~~~~~n~~~~~~~~~~~k~~l~~~~~ 249 (257)
+|+||||||++|++ +|++||+.++..++++..++.+|++||++++|+++++|++|++++.
T Consensus 592 ~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~~ls~~dl~~la~Ns~~asfl~~~~K~~ll~~~~ 654 (701)
T 2a3l_A 592 NVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHWIGKDY 654 (701)
T ss_dssp CEEECCBCHHHHCCSSSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHSCCCHHHHHHHSCTTT
T ss_pred cEEEeCCCccccCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999986 6999999999999999999999999999999999999999987653
No 8
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=99.89 E-value=5.7e-22 Score=185.48 Aligned_cols=198 Identities=20% Similarity=0.160 Sum_probs=151.3
Q ss_pred hhhhhhHhhcccCCCcEEEEEEEeeCCCC--------HH-HHHHHHHHHHhhCC--CceEEEecc-CCCCCCChhcHHHH
Q 025169 37 TKNMNDACNGTRGKKIYVRLLLSIDRRET--------TE-AAMETVKLALEMRD--LGVVGIDLS-GNPTKGEWTTFLPA 104 (257)
Q Consensus 37 ~~~~~~~~~a~~~~gir~~li~~~~r~~~--------~e-~~~~~~~~~~~~~~--~~vvg~~l~-g~~~~~~~~~~~~~ 104 (257)
++......+++.+.|+|+.+..++++... .+ ...+..++..+|.+ .+.+.+.+. ..+++++++.++++
T Consensus 169 ~~~~~~~~~a~~~~G~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~ 248 (476)
T 4aql_A 169 TDSSLLLADITDKFGQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGEL 248 (476)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHH
T ss_pred chHHHHHHHHHHHhCCEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHH
Confidence 34444566788889999998887766332 12 23344444444532 334554444 34667899999999
Q ss_pred HHHHHHcCCceeeecCCCCCH-hhHH----------HHH-hc---CC-cEEeecccccHHHHHHHhcCCCcEEecccccc
Q 025169 105 LKFAREQGLQITLHCGEIPNK-EEIQ----------SML-DF---LP-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 105 ~~~A~~~gl~v~~Ha~E~~~~-~~i~----------~~l-~l---g~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
++.|+++|+++++|++|+... +.+. +.+ ++ ++ ..++||++++++++++++++|+.+++||.||+
T Consensus 249 ~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~ 328 (476)
T 4aql_A 249 GNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNL 328 (476)
T ss_dssp HHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH
T ss_pred HHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhh
Confidence 999999999999999987421 1111 112 22 32 36899999999999999999999999999999
Q ss_pred eeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHh-----------CCCCHHHHHHHH-HHHHHHcCC
Q 025169 169 RTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASA-----------FSLGRREMFQLA-KSAVKFIFA 236 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~-----------~~ls~~~v~~~~-~n~~~~~~~ 236 (257)
+++. +..|+++|+++||+|++|||+++.+..+++++|+.+... .+++..++++++ .|+++++++
T Consensus 329 ~l~~----g~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl 404 (476)
T 4aql_A 329 SLSS----GFLNVLEVLKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGL 404 (476)
T ss_dssp HTTC----CCCCHHHHHHTTCEEEECCCTTTSSCCCHHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTC
T ss_pred hhCc----chHHHHHHHHCCCcEEEeCCCCCCCCCCHHHHHHHHHHHHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCC
Confidence 9887 789999999999999999999876668999999988754 489999999985 899999998
Q ss_pred Ch
Q 025169 237 NG 238 (257)
Q Consensus 237 ~~ 238 (257)
++
T Consensus 405 ~~ 406 (476)
T 4aql_A 405 DG 406 (476)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 9
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=99.88 E-value=1.6e-21 Score=179.89 Aligned_cols=197 Identities=14% Similarity=0.127 Sum_probs=154.0
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC-------------CCHH-HHHHHHHHHHhhCC---CceEEEeccC-CCCCCChh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR-------------ETTE-AAMETVKLALEMRD---LGVVGIDLSG-NPTKGEWT 99 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~-------------~~~e-~~~~~~~~~~~~~~---~~vvg~~l~g-~~~~~~~~ 99 (257)
..++...++.++.|+|+.+..+.... ...+ ...+..++..+|.. .+.+.+.+.. .++.++++
T Consensus 140 ~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (456)
T 3ls9_A 140 SYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPE 219 (456)
T ss_dssp THHHHHHHHHHHHTCEEEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHH
T ss_pred hhHHHHHHHHHHcCCEEEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHH
Confidence 45566678888899999988876542 1222 23445555566654 4455555543 35678899
Q ss_pred cHHHHHHHHHHcCCceeeecCCCCCHhhH---------HHHHhcC---C-cEEeecccccHHHHHHHhcCCCcEEecccc
Q 025169 100 TFLPALKFAREQGLQITLHCGEIPNKEEI---------QSMLDFL---P-QRIGHACCFEEEEWRKLKSSKIPVEICLTS 166 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i---------~~~l~lg---~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~S 166 (257)
.++++++.|+++|+++++|+.|+.....+ ....++| . .+++||++++++++++++++|+.+++||.|
T Consensus 220 ~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~s 299 (456)
T 3ls9_A 220 LFEAFAQMAADYDVRLHTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAP 299 (456)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECHHH
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEChhH
Confidence 99999999999999999999987543111 1112233 3 479999999999999999999999999999
Q ss_pred cceeccccCCCcccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHHhC----------CCCHHHHHHH-HHHHHHHc
Q 025169 167 NIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAASAF----------SLGRREMFQL-AKSAVKFI 234 (257)
Q Consensus 167 N~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~~~----------~ls~~~v~~~-~~n~~~~~ 234 (257)
|++++. +.+|+++|+++|++|++|||++++++ .+++.|++.+.... ++++.+++++ +.|+++++
T Consensus 300 ~~~l~~----~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~l 375 (456)
T 3ls9_A 300 DLRMGW----GLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPADPNEPEKWLSARELLRMATRGSAECL 375 (456)
T ss_dssp HHHTTC----CCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHHT
T ss_pred HhhcCC----CcchHHHHHHCCCcEEEECCCCccCCCCCHHHHHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHh
Confidence 999886 78899999999999999999998765 69999999888654 7999999998 58999999
Q ss_pred CCCh
Q 025169 235 FANG 238 (257)
Q Consensus 235 ~~~~ 238 (257)
++++
T Consensus 376 g~~~ 379 (456)
T 3ls9_A 376 GRPD 379 (456)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 9864
No 10
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=99.86 E-value=8.2e-21 Score=175.14 Aligned_cols=191 Identities=15% Similarity=0.178 Sum_probs=149.4
Q ss_pred hHhhcccCCCcEEEEEEEeeCCC-----CH-HHHHHHHHHHHhhCCCceEEEecc-CCCCCCChhcHHHHHHHHHHcCCc
Q 025169 42 DACNGTRGKKIYVRLLLSIDRRE-----TT-EAAMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQ 114 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r~~-----~~-e~~~~~~~~~~~~~~~~vvg~~l~-g~~~~~~~~~~~~~~~~A~~~gl~ 114 (257)
.+.++.++.|+|..+..++.... .+ +...+..++..++.+.+.++++++ ..++.++++.++++++.|+++|++
T Consensus 138 ~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 217 (451)
T 4dyk_A 138 AICGVVHDSGVRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDAS 217 (451)
T ss_dssp HHHHHHHHHTCEEEEEEEECSSCBTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCeEEEEchhhCCCCccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcCCc
Confidence 44566677899999988876421 23 333455566666766566655554 345567889999999999999999
Q ss_pred eeeecCCCCCHhhHHHHH------------hcC---C-cEEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCc
Q 025169 115 ITLHCGEIPNKEEIQSML------------DFL---P-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDI 178 (257)
Q Consensus 115 v~~Ha~E~~~~~~i~~~l------------~lg---~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~ 178 (257)
+++|+.|+. ..+..++ ++| . ..++||++++++++++++++|+.+++||.||++++. +.
T Consensus 218 v~~H~~e~~--~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~----~~ 291 (451)
T 4dyk_A 218 IQMHVHETA--FEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLAS----GF 291 (451)
T ss_dssp EEEEESCCH--HHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHHHTTC----CC
T ss_pred EEEEeCCCH--HHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhhhccC----Cc
Confidence 999999873 2322222 122 2 468999999999999999999999999999998875 77
Q ss_pred ccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHH--------hCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 179 HHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAAS--------AFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 179 ~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~--------~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
+|+++|+++|+++++|||++..++ .++++|++.+.. ..++++.+++++ +.|+++++++++
T Consensus 292 ~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~ 361 (451)
T 4dyk_A 292 CPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLER 361 (451)
T ss_dssp CCHHHHHHHTCCEEECCCCGGGSSCCCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred ccHHHHHhCCCeEEEECCCCccCCCCCHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999988754 699999988762 357999999998 589999999875
No 11
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=99.86 E-value=7.6e-21 Score=176.82 Aligned_cols=195 Identities=16% Similarity=0.154 Sum_probs=148.7
Q ss_pred hhhHhhcccCCCcEEEEEEEeeCCC--------------CHHHHHHHHHHHHhhCC---CceEEEeccC-CCCCCChhcH
Q 025169 40 MNDACNGTRGKKIYVRLLLSIDRRE--------------TTEAAMETVKLALEMRD---LGVVGIDLSG-NPTKGEWTTF 101 (257)
Q Consensus 40 ~~~~~~a~~~~gir~~li~~~~r~~--------------~~e~~~~~~~~~~~~~~---~~vvg~~l~g-~~~~~~~~~~ 101 (257)
++.++++.++.|+|+.+..+..... ..+...+..++..++.. .+++.+.+.+ .++.++++.+
T Consensus 163 ~~~~~~~~~~~g~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l 242 (479)
T 3h4u_A 163 LDDSIGAAQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLM 242 (479)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHH
T ss_pred HHHHHHHHHHcCCEEEEEeeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHH
Confidence 4566677788899998877665421 11222334444555554 3455555543 5667899999
Q ss_pred HHHHHHHHHcCCceeeecCCCCCH-h---------hHHHHHhcC---C-cEEeecccccHHHHHHHhcCCCcEEeccccc
Q 025169 102 LPALKFAREQGLQITLHCGEIPNK-E---------EIQSMLDFL---P-QRIGHACCFEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 102 ~~~~~~A~~~gl~v~~Ha~E~~~~-~---------~i~~~l~lg---~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
+++++.|+++|+++++|+.|+... . .+....++| + ..++||++++++++++++++|+.+++||+||
T Consensus 243 ~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~v~~~p~s~ 322 (479)
T 3h4u_A 243 RDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSN 322 (479)
T ss_dssp HHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChhHh
Confidence 999999999999999999987421 0 112222233 3 4699999999999999999999999999999
Q ss_pred ceeccccCCCcccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHHhC----C---CCHHHHHHH-HHHHHHHcCCCh
Q 025169 168 IRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAASAF----S---LGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 168 ~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~~~----~---ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
++++. +.+|+++|+++|++|++|||++++++ .++++||+.+.... + +++.+++++ +.|+++++++++
T Consensus 323 ~~l~~----~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 398 (479)
T 3h4u_A 323 MRLAS----GIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDD 398 (479)
T ss_dssp HHTTC----CCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCSS
T ss_pred hhcCC----CCCCHHHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99876 78899999999999999999998764 79999998876542 4 999999998 589999999864
No 12
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=99.85 E-value=3.9e-20 Score=172.29 Aligned_cols=191 Identities=14% Similarity=0.074 Sum_probs=148.1
Q ss_pred hHhhcccCCCcEEEEEEEeeCC-----CCHHH-HHHHHHHHHhhCCCceEEEecc-CCCCCCChhcHHHHHHHHHHcCCc
Q 025169 42 DACNGTRGKKIYVRLLLSIDRR-----ETTEA-AMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQ 114 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r~-----~~~e~-~~~~~~~~~~~~~~~vvg~~l~-g~~~~~~~~~~~~~~~~A~~~gl~ 114 (257)
.+.++..+.|+|+.+..++... .+.++ ..+..++...+.+.+.+.+.++ ..+++++++.++++++.|+++|++
T Consensus 145 ~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 224 (472)
T 4dzh_A 145 VQAAVYKQHGFRALVGAVIIDFPTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMP 224 (472)
T ss_dssp HHHHHHHHTTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCeEEEEecccCCCcccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCe
Confidence 4456677789999888776541 12333 3344455556665555555554 345678899999999999999999
Q ss_pred eeeecCCCCCHhhHHHH------------HhcCC----cEEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCc
Q 025169 115 ITLHCGEIPNKEEIQSM------------LDFLP----QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDI 178 (257)
Q Consensus 115 v~~Ha~E~~~~~~i~~~------------l~lg~----~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~ 178 (257)
+++|+.|+. ..+..+ .++|. .+++||+++++++++++++.|+.+++||.||++++. +.
T Consensus 225 v~iH~~e~~--~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~~~~~----~~ 298 (472)
T 4dzh_A 225 VHLHTHETA--QEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLAS----GF 298 (472)
T ss_dssp EEEEESCCH--HHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTC----CC
T ss_pred EEEEeCCCH--HHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHHhcCC----CC
Confidence 999999873 222222 22232 468999999999999999999999999999998876 77
Q ss_pred ccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHHh--------CCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 179 HHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAASA--------FSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 179 ~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~~--------~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.|+++|+++|+++++|||++++++ .++++|++.+... .++++.+++++ +.|+++++++++
T Consensus 299 ~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~ 368 (472)
T 4dzh_A 299 CPACALQRASVNLAIGTDGCASNNDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGFGD 368 (472)
T ss_dssp CCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred ccHHHHHHCCCCEEEECCCCcCCCCCCHHHHHHHHHHHhhhhcCCCCcCCHHHHHHHHHHHHHHHcCCCC
Confidence 899999999999999999987664 7999999887653 27999999998 589999999875
No 13
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.84 E-value=1.4e-20 Score=174.63 Aligned_cols=191 Identities=14% Similarity=0.114 Sum_probs=142.4
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC----------------CCHHHHHHHHHHHHhh-CC-CceEEEeccCCCCCCChh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR----------------ETTEAAMETVKLALEM-RD-LGVVGIDLSGNPTKGEWT 99 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~----------------~~~e~~~~~~~~~~~~-~~-~~vvg~~l~g~~~~~~~~ 99 (257)
+.++++.++.++.|+|+.+..++.+. .+++...+.++...+. .. ...++++..+ +++++++
T Consensus 136 ~~~~~~~~a~~~~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~e 214 (453)
T 3mdu_A 136 ELSLRISRAASAAGIGLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHSLGLCFHS-LRAVTPQ 214 (453)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTCEECEEEEE-TTTSCHH
T ss_pred hHHHHHHHHHHHhCCeEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCCeEEEecCC-CCcCCHH
Confidence 45667778889999999887665441 1334444433333222 11 1255555433 4678999
Q ss_pred cHHHHHHHHHHcCCceeeecCCCCCHh----------hHHHHHhcC---C-cEEeecccccHHHHHHHhcCCCcEEeccc
Q 025169 100 TFLPALKFAREQGLQITLHCGEIPNKE----------EIQSMLDFL---P-QRIGHACCFEEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~Ha~E~~~~~----------~i~~~l~lg---~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~ 165 (257)
.++++++.|+ .|+++++|++|+.... .+..+.+.| + .+++||++++++++++|+++|+.+++||+
T Consensus 215 ~l~~~~~~A~-~g~~v~~H~~e~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~ 293 (453)
T 3mdu_A 215 QIATVLAAGH-DDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLS 293 (453)
T ss_dssp HHHHHHTSSC-TTSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHH
T ss_pred HHHHHHHHHh-cCCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECch
Confidence 9999999999 9999999999874211 122222333 3 57899999999999999999999999999
Q ss_pred ccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhC---------------CCCHHHHHHH-HHH
Q 025169 166 SNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAF---------------SLGRREMFQL-AKS 229 (257)
Q Consensus 166 SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~---------------~ls~~~v~~~-~~n 229 (257)
||++++. +.+|+++|+++|++|++|||.+ .+.++++||+.+.... +++..+++++ +.|
T Consensus 294 sn~~lg~----g~~p~~~~~~~Gv~v~lgtD~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 367 (453)
T 3mdu_A 294 TEANLGD----GIFPATDFLAQGGRLGIGSDSH--VSLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAG 367 (453)
T ss_dssp HHHHTTC----CCCCHHHHHHTTCEEEECCBTC--SCCCHHHHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHH
T ss_pred hHhhcCC----CCCCHHHHHHCCCEEEEECCCC--CCCCHHHHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHH
Confidence 9999886 7899999999999999999964 3468999998876421 6889999987 589
Q ss_pred HHHHcCC
Q 025169 230 AVKFIFA 236 (257)
Q Consensus 230 ~~~~~~~ 236 (257)
++++.++
T Consensus 368 ~a~~~~~ 374 (453)
T 3mdu_A 368 GAQALGQ 374 (453)
T ss_dssp HHHHHTS
T ss_pred HHHHhCC
Confidence 9999875
No 14
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=99.82 E-value=9.6e-20 Score=168.89 Aligned_cols=191 Identities=14% Similarity=0.155 Sum_probs=145.1
Q ss_pred hHhhcccCCCcEEEEEEEeeCC-----CCHHHH-HHHHHHHHhhCCC-----ceEEEecc-CCCCCCChhcHHHHHHHHH
Q 025169 42 DACNGTRGKKIYVRLLLSIDRR-----ETTEAA-METVKLALEMRDL-----GVVGIDLS-GNPTKGEWTTFLPALKFAR 109 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r~-----~~~e~~-~~~~~~~~~~~~~-----~vvg~~l~-g~~~~~~~~~~~~~~~~A~ 109 (257)
.+.++.++.|+|+.+..++... .++++. .+..++...+... +.+.+.+. ..++.++++.++++++.|+
T Consensus 158 ~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~ 237 (468)
T 3lnp_A 158 QSGEAALAAGIRAVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSD 237 (468)
T ss_dssp HHHHHHHHHTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 3446667789999888877631 123332 3334444454432 24444443 3456778899999999999
Q ss_pred HcCCceeeecCCCCCHhhHHHHH------------hcC---C-cEEeecccccHHHHHHHhcCCCcEEecccccceeccc
Q 025169 110 EQGLQITLHCGEIPNKEEIQSML------------DFL---P-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETI 173 (257)
Q Consensus 110 ~~gl~v~~Ha~E~~~~~~i~~~l------------~lg---~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~ 173 (257)
++|+++++|+.|+ ...+..++ ++| . .+++||+++++++++++++.|+.+++||.||++++.
T Consensus 238 ~~g~~v~~H~~e~--~~~~~~~~~~~g~~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~- 314 (468)
T 3lnp_A 238 QLDMPVQIHLHET--DFEVSESLETFNKRPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLAS- 314 (468)
T ss_dssp HHTCCEEEEESCS--HHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHTTC-
T ss_pred HcCCcEEEEeCCC--HHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhhhcCC-
Confidence 9999999999987 32222222 122 2 468999999999999999999999999999998875
Q ss_pred cCCCcccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHH--------hCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 174 SSLDIHHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAAS--------AFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 174 ~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~--------~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
+.+|+++|+++|+++++|||++..++ .+++++++.+.. ..+++..+++++ +.|+++++++++
T Consensus 315 ---~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 386 (468)
T 3lnp_A 315 ---GFCPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDD 386 (468)
T ss_dssp ---CCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred ---CCCCHHHHHHCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence 77899999999999999999988754 699999987762 247999999998 589999999875
No 15
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=99.82 E-value=1e-19 Score=167.64 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=145.8
Q ss_pred hHhhcccCCCcEEEEEEEeeCC-----CCHHHH-HHHHHHHHhhCCCceEEEecc-CCCCCCChhcHHHHHHHHHHcCCc
Q 025169 42 DACNGTRGKKIYVRLLLSIDRR-----ETTEAA-METVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQ 114 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r~-----~~~e~~-~~~~~~~~~~~~~~vvg~~l~-g~~~~~~~~~~~~~~~~A~~~gl~ 114 (257)
.+.++.++.|+|+.+...+... .++++. .+..++..++.+.+.+.+.+. ..++.++++.++++++.|+++|++
T Consensus 136 ~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 215 (447)
T 4f0r_A 136 AVARAGLASGMRTFVGCSILEFPTNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDML 215 (447)
T ss_dssp HHHHHHHHHTCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCeEEEEchhcCCCcccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCe
Confidence 3445666789999888776631 133333 334445555555445555544 335567889999999999999999
Q ss_pred eeeecCCCCCHhhHHHHH------------hcC---C-cEEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCc
Q 025169 115 ITLHCGEIPNKEEIQSML------------DFL---P-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDI 178 (257)
Q Consensus 115 v~~Ha~E~~~~~~i~~~l------------~lg---~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~ 178 (257)
+++|+.|+ ...+..++ ++| . ..+.||+++++++++++++.|+.+++||.||++++. +.
T Consensus 216 v~iH~~~~--~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~----~~ 289 (447)
T 4f0r_A 216 IHCHIHET--ADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLAS----GI 289 (447)
T ss_dssp EEEEESCC--HHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTC----CC
T ss_pred EEEEeCCC--HHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhhhcCC----CC
Confidence 99999987 33322222 122 2 468899999999999999999999999999998875 77
Q ss_pred ccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHH--------hCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 179 HHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAAS--------AFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 179 ~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~--------~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.|+++++++|+++++|||++.+++ .+++.+++.+.. ..++++.+++++ +.|++++.++++
T Consensus 290 ~~~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~n~A~~lg~~~ 359 (447)
T 4f0r_A 290 SPVSKLMDAGVAVGIGTDGAASNNKLDMLAETRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIAD 359 (447)
T ss_dssp CCHHHHHHTTCEEEECCCCGGGTCCCCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CcHHHHHHCCCcEEEeCCCCcCCCCCCHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 899999999999999999988754 699999988762 248999999998 589999999875
No 16
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.79 E-value=8e-19 Score=162.49 Aligned_cols=190 Identities=10% Similarity=0.089 Sum_probs=140.9
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC----------------CCHHHHHHHHHHHHh-hCCCc--eEEEeccCCCCCCCh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR----------------ETTEAAMETVKLALE-MRDLG--VVGIDLSGNPTKGEW 98 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~----------------~~~e~~~~~~~~~~~-~~~~~--vvg~~l~g~~~~~~~ 98 (257)
+.++.+.++.++.|+|+.+..++.+. .++++..+.++...+ +...+ .+++.. ..++.+++
T Consensus 145 ~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 223 (458)
T 4f0l_A 145 EMADRIAAAATTAGMGLTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAP-HSLRAVTP 223 (458)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEE-CBTTTSCH
T ss_pred hhHHHHHHHHHHcCCeEEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEec-CCcCcCCH
Confidence 45677778889999999887665431 234444444443333 22222 344433 34567889
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHh----------hHHHHHh---cCC-cEEeecccccHHHHHHHhcCCCcEEecc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKE----------EIQSMLD---FLP-QRIGHACCFEEEEWRKLKSSKIPVEICL 164 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~----------~i~~~l~---lg~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP 164 (257)
+.++.+++.|+ |+++++|++|+.... .+....+ +++ ..++||++++++++++++++|+.+++||
T Consensus 224 ~~l~~~~~~a~--g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p 301 (458)
T 4f0l_A 224 DELDSVTQLLP--DAPVHIHVAEQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLCP 301 (458)
T ss_dssp HHHHHHTTSST--TSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECH
T ss_pred HHHHHHHHHhc--CCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEECc
Confidence 99999999998 999999999873211 1111122 233 4689999999999999999999999999
Q ss_pred cccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhC--------------CCCHHHHHHH-HHH
Q 025169 165 TSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAF--------------SLGRREMFQL-AKS 229 (257)
Q Consensus 165 ~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~--------------~ls~~~v~~~-~~n 229 (257)
.||+.++. +..|+++|+++|++|++|||.. ++.++++|++.+.... ++++.+++++ +.|
T Consensus 302 ~s~~~l~~----~~~~~~~~~~~Gv~v~lgtD~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~ 375 (458)
T 4f0l_A 302 VTEANLGD----GTFNATEFAAAGGKFGIGSDSN--VLIGIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLG 375 (458)
T ss_dssp HHHHHTTC----CCCCHHHHHHTTCEEEECCBTT--SSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHH
T ss_pred cccccccC----CCccHHHHHHCCCeEEEECCCC--CCCCHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHH
Confidence 99999886 7889999999999999999942 3479999998876431 3899999997 589
Q ss_pred HHHHcCC
Q 025169 230 AVKFIFA 236 (257)
Q Consensus 230 ~~~~~~~ 236 (257)
+++++++
T Consensus 376 ~A~~lg~ 382 (458)
T 4f0l_A 376 GNIAMGR 382 (458)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 9999987
No 17
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.77 E-value=1.9e-18 Score=159.30 Aligned_cols=188 Identities=14% Similarity=0.085 Sum_probs=136.6
Q ss_pred hhcccCCCcEEEEEEEeeCCCCH---HHHHHHHHHHHhhCC--CceEEEecc-CCCCCCChhcHHHHHHHHHHcCCceee
Q 025169 44 CNGTRGKKIYVRLLLSIDRRETT---EAAMETVKLALEMRD--LGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQITL 117 (257)
Q Consensus 44 ~~a~~~~gir~~li~~~~r~~~~---e~~~~~~~~~~~~~~--~~vvg~~l~-g~~~~~~~~~~~~~~~~A~~~gl~v~~ 117 (257)
.++.++.|+|+.+...+....+. +...+..+....+.. .+.+.+.++ ..+++++++.++.+++.|+++|+++++
T Consensus 126 ~~a~~~~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~ 205 (427)
T 3v7p_A 126 LQACIDSALKVVYFNEVIGSNAATADVMYASFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSV 205 (427)
T ss_dssp HHHHHHBSSEEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCeEEEeccccCCChhhhhHHHHHHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEE
Confidence 35667889999988876653221 111222222222211 223333333 346788999999999999999999999
Q ss_pred ecCCCCCHhh-------------------------HHHHHh--cCC-cEEeecccccHHHHHHHhcCCCcEEecccccce
Q 025169 118 HCGEIPNKEE-------------------------IQSMLD--FLP-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIR 169 (257)
Q Consensus 118 Ha~E~~~~~~-------------------------i~~~l~--lg~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~ 169 (257)
|++|+..... ..+.+. +++ ..+.||++++++++++++++|+.+++||.||+.
T Consensus 206 H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~ 285 (427)
T 3v7p_A 206 HFMESRAEREWLDKGSGEFAKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRL 285 (427)
T ss_dssp EESCSHHHHHHHHHSCSHHHHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHHH
T ss_pred EeCCCHHHHHHHHHhcCcchhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHHH
Confidence 9999843211 111122 244 358999999999999999999999999999999
Q ss_pred eccccCCCcccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHHhCC-----CCHHHHHHH-HHHHHHHcCCC
Q 025169 170 TETISSLDIHHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAASAFS-----LGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 170 l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~~~~-----ls~~~v~~~-~~n~~~~~~~~ 237 (257)
++. +..|+++| +|++|++|||++.+++ .+++.|++.+..... +++.+++++ +.|++++.+++
T Consensus 286 ~~~----~~~~~~~~--~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~ 354 (427)
T 3v7p_A 286 LGN----GVLDLEKI--KSIPYAIATDGLSSNYSLNMYEELKAALFVHPNKEATTFAKELIIRATKAGYDALGFE 354 (427)
T ss_dssp TTC----CCCCTTTT--TTSCEEECCCCTTSCSCCCHHHHHHHHHHHSTTSCHHHHHHHHHHHHTHHHHHHHTCS
T ss_pred hcC----CCCCHHHH--CCCeEEEeCCCCCCCCCCCHHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHhCCC
Confidence 876 77899999 9999999999877665 799999998876542 446788887 58999998864
No 18
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.74 E-value=2.1e-17 Score=154.07 Aligned_cols=195 Identities=16% Similarity=0.166 Sum_probs=142.1
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC-------CCHHH-HHHHHHHHHhhCCCceEEEecc-CCCCCCChhcHHHHHHHH
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR-------ETTEA-AMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFA 108 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~-------~~~e~-~~~~~~~~~~~~~~~vvg~~l~-g~~~~~~~~~~~~~~~~A 108 (257)
+.++...++.++.|+|+.+...+... .++++ ..+..++..+|.+.+.+++.+. ..+..++++.++++++.|
T Consensus 144 ~~~~~~~~~~~~~g~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a 223 (475)
T 2ood_A 144 VATEELFEEASRRNMRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRFAFGASPELLKACQRLK 223 (475)
T ss_dssp HHHHHHHHHHHHHTCCEEECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECBGGGCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCeEEEEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccccCcCCHHHHHHHHHHH
Confidence 45566666777788887654333321 12222 2334455555654444554443 224467889999999999
Q ss_pred HHc-CCceeeecCCCCCHhhHHH-------------HHh----cCCc-EEeecccccHHHHHHHhcCCCcEEecccccce
Q 025169 109 REQ-GLQITLHCGEIPNKEEIQS-------------MLD----FLPQ-RIGHACCFEEEEWRKLKSSKIPVEICLTSNIR 169 (257)
Q Consensus 109 ~~~-gl~v~~Ha~E~~~~~~i~~-------------~l~----lg~~-ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~ 169 (257)
++. |+++++|+.|+.. ++.. +++ ++++ ++.||++++++++++++++|+.+++||.+|..
T Consensus 224 ~~~~g~~v~~H~~e~~~--~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~~ 301 (475)
T 2ood_A 224 HEHPDCWVNTHISENPA--ECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLF 301 (475)
T ss_dssp HHCTTSEEEEECSCCHH--HHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHH
T ss_pred HhCCCCcEEEeeCCChH--HHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhhh
Confidence 999 9999999987632 2221 121 2443 58999999999999999999999999999987
Q ss_pred eccccCCCcccHHHHHhcCCC--EEecCCCCCCCCCChHHHHHHHHHh------------------------CCCCHHHH
Q 025169 170 TETISSLDIHHFVDLYKAQHP--LVLCTDDSGVFSTSVSREYDLAASA------------------------FSLGRREM 223 (257)
Q Consensus 170 l~~~~~~~~~pi~~l~~~Gv~--v~lgTD~~~~~~~~l~~E~~~a~~~------------------------~~ls~~~v 223 (257)
++. +..|+++++++|++ +++|||.+..+..+++++++.+... .++++.++
T Consensus 302 l~~----~~~~~~~~~~~Gv~~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~a 377 (475)
T 2ood_A 302 LGS----GLFRLGRATDPEHRVKMSFGTDVGGGNRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRG 377 (475)
T ss_dssp TTC----CCCCHHHHTCTTSCCEEEECCCBTTBSCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHH
T ss_pred ccc----CcCCHHHHHhCCCCCcEEEEccCCCCCCcCHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHH
Confidence 765 67899999999999 9999998764456899998876432 57999999
Q ss_pred HHH-HHHHHHHcCCCh
Q 025169 224 FQL-AKSAVKFIFANG 238 (257)
Q Consensus 224 ~~~-~~n~~~~~~~~~ 238 (257)
+++ +.|+++++++++
T Consensus 378 l~~~T~~~A~~lgl~~ 393 (475)
T 2ood_A 378 FWSVTLGGAEGLYIDD 393 (475)
T ss_dssp HHHTTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhCCCC
Confidence 998 689999999864
No 19
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.72 E-value=7.7e-17 Score=148.23 Aligned_cols=193 Identities=16% Similarity=0.059 Sum_probs=137.3
Q ss_pred hhhhHhhcccCCCcEEEEEEEeeCCC-------CH-HHHHHHHHHHHhhCC-CceEEEeccC-CCCCCChhcHHHHHHHH
Q 025169 39 NMNDACNGTRGKKIYVRLLLSIDRRE-------TT-EAAMETVKLALEMRD-LGVVGIDLSG-NPTKGEWTTFLPALKFA 108 (257)
Q Consensus 39 ~~~~~~~a~~~~gir~~li~~~~r~~-------~~-e~~~~~~~~~~~~~~-~~vvg~~l~g-~~~~~~~~~~~~~~~~A 108 (257)
.++...++.++.|+|+.+..++.... .. +...+..++...+.. .+.+.+.++. .+..++++.++++++.|
T Consensus 140 ~~~~~~~~~~~~g~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 219 (439)
T 2i9u_A 140 STIELFNMLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLS 219 (439)
T ss_dssp HHHHHHHHHHHHTCEEEEECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECCGGGCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEEEEeeeccccCCcccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCCcCcCCHHHHHHHHHHH
Confidence 44555666667788876654443211 11 122334444444532 2334444432 23356789999999999
Q ss_pred HHcCCceeeecCCCCCH------------hhHHHHHhcCC-----cEEeecccccHHHHHHHhcCCCcEEecccccceec
Q 025169 109 REQGLQITLHCGEIPNK------------EEIQSMLDFLP-----QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTE 171 (257)
Q Consensus 109 ~~~gl~v~~Ha~E~~~~------------~~i~~~l~lg~-----~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~ 171 (257)
++.|+++++|+.|+... ..+..+.+.|. ..+.||++++++++++++++|+.+++||.+|..++
T Consensus 220 ~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~~l~ 299 (439)
T 2i9u_A 220 YKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLG 299 (439)
T ss_dssp HHHTCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTT
T ss_pred HhcCCcEEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEEECccchhhcc
Confidence 99999999999876211 01111222343 24999999999999999999999999999998776
Q ss_pred cccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHh------------CCCCHHHHHHH-HHHHHHHcC
Q 025169 172 TISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASA------------FSLGRREMFQL-AKSAVKFIF 235 (257)
Q Consensus 172 ~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~------------~~ls~~~v~~~-~~n~~~~~~ 235 (257)
. +..|+++++++|+++++|||++..+..++++|++.+... .++|+.+++++ +.|++++++
T Consensus 300 ~----~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 372 (439)
T 2i9u_A 300 S----GMMPVRKYLNLGINVVLGSDISAGHTCSLFKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFG 372 (439)
T ss_dssp C----CCCCHHHHHHTTCEEEECCCBTTBCCSCHHHHHHHHHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTS
T ss_pred c----ccCCHHHHHHCCCcEEEecCCCCCCCcCHHHHHHHHHHHhccccccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 4 578999999999999999998764457999999887642 58999999998 589999876
No 20
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.71 E-value=7.9e-17 Score=147.27 Aligned_cols=141 Identities=13% Similarity=0.045 Sum_probs=120.8
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
.++++.++++++.|+++|+++++|+.|......+..+...|..++.||+++++++++++++.|+.+++||.+|+.++.
T Consensus 226 ~~~~e~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~~~~~i~~~~~~g~~~~~~p~~~~~l~~-- 303 (421)
T 2bb0_A 226 VFTVSQSRRYLQKAAEAGFGLKIHADEIDPLGGAELAGKLKAVSADHLVGTSDEGIKKLAEAGTIAVLLPGTTFYLGK-- 303 (421)
T ss_dssp SBCHHHHHHHHHHHHHTTCEEEEEECSSSCCSHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTC--
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccccccCHHHHHHHcCCcEEhhhhcCCHHHHHHHHHcCCeEEECCchhhhhcc--
Confidence 457899999999999999999999987754344555556788899999999999999999999999999999987632
Q ss_pred CCCcccHHHHHhcCCCEEecCCCCC-CCC-CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 175 SLDIHHFVDLYKAQHPLVLCTDDSG-VFS-TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 175 ~~~~~pi~~l~~~Gv~v~lgTD~~~-~~~-~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.+..|++.++++|++|++|||.+. +++ .+++.+++.+....++|+.+++++ |.|+++++++++
T Consensus 304 -~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~ 369 (421)
T 2bb0_A 304 -STYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGE 369 (421)
T ss_dssp -CCCCCHHHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred -cccchHHHHHHCCCeEEEeCCCCCCCCcccCHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccC
Confidence 145799999999999999999764 444 599999998887789999999998 689999999875
No 21
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=99.71 E-value=9.7e-17 Score=145.31 Aligned_cols=169 Identities=14% Similarity=0.138 Sum_probs=130.3
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccC---------CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcC
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSG---------NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL 135 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g---------~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg 135 (257)
+++++.+.++...+...+ .+.+...| ....++++.++++++.|+++|+++++|+.+ ...+..+++.|
T Consensus 165 ~~~~~~~~~~~~~~~g~~-~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~---~~~i~~~~~~g 240 (403)
T 3gnh_A 165 SPDEARKAVRTLKKYGAQ-VIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHG---ASGIREAVRAG 240 (403)
T ss_dssp SHHHHHHHHHHHHHTTCS-EEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCC-EEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhC
Confidence 456666666665554333 34433322 133568899999999999999999999954 45678888899
Q ss_pred CcEEeecccccHHHHHHHhcCCCcEEecccccceecc------cc-----------CCCcccHHHHHhcCCCEEecCCCC
Q 025169 136 PQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTET------IS-----------SLDIHHFVDLYKAQHPLVLCTDDS 198 (257)
Q Consensus 136 ~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~------~~-----------~~~~~pi~~l~~~Gv~v~lgTD~~ 198 (257)
+++|.||++++++++++|+++|+.+++||.++..+.. .+ .....|++.|+++|++|++|||.+
T Consensus 241 ~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~ 320 (403)
T 3gnh_A 241 VDTIEHASLVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAG 320 (403)
T ss_dssp CSEEEECTTCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBT
T ss_pred CCEEecCCcCCHHHHHHHHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 9999999999999999999999999987765432211 00 011247899999999999999998
Q ss_pred CCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 199 GVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 199 ~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.+.+..+..|+..+.+ .++++.+++++ +.|+++++++++
T Consensus 321 ~~~~~~~~~e~~~~~~-~gl~~~~al~~aT~~~A~~lg~~~ 360 (403)
T 3gnh_A 321 IYPHGDNAKQFAVMVR-YGATPLQAIQSATLTAAEALGRSK 360 (403)
T ss_dssp TBCTTCGGGHHHHHHH-TTCCHHHHHHHTTHHHHHHHTCTT
T ss_pred CCCCCchHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 7776677889988766 69999999998 589999999875
No 22
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.70 E-value=1.4e-16 Score=145.95 Aligned_cols=188 Identities=15% Similarity=0.143 Sum_probs=133.8
Q ss_pred cccCCCcEEEEEEEeeCCCCHH----HHHHHHHHHHhhCC--CceEEEecc-CCCCCCChhcHHHHHHHHHHcCCceeee
Q 025169 46 GTRGKKIYVRLLLSIDRRETTE----AAMETVKLALEMRD--LGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQITLH 118 (257)
Q Consensus 46 a~~~~gir~~li~~~~r~~~~e----~~~~~~~~~~~~~~--~~vvg~~l~-g~~~~~~~~~~~~~~~~A~~~gl~v~~H 118 (257)
+.++.|+|+.+...+.. .+++ ...+..++...+.+ .+.+.+.++ ..+..++++.++++++.|++.|+++++|
T Consensus 162 ~~~~~g~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 240 (420)
T 2imr_A 162 LLAREDLSGTLYFEVLN-PFPDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIH 240 (420)
T ss_dssp HHTCTTCCEEEEEEECB-CCGGGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEE
T ss_pred HHHhcCcEEEEEeeecC-CCchhhHHHHHHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEE
Confidence 34567888877655543 2221 12233334444432 122233332 2234567889999999999999999999
Q ss_pred cCCCCCH-h-----------------------------------hHHHHHhcCC----cEEeecccccHHHHHHHhcCCC
Q 025169 119 CGEIPNK-E-----------------------------------EIQSMLDFLP----QRIGHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 119 a~E~~~~-~-----------------------------------~i~~~l~lg~----~ri~Hg~~l~~~~~~~l~~~~i 158 (257)
+.|+... . .+..+.+.|. ..+.||++++++++++++++|+
T Consensus 241 ~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~ 320 (420)
T 2imr_A 241 VAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGC 320 (420)
T ss_dssp ESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHHHTC
T ss_pred eCCCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCCHHHHHHHHHcCC
Confidence 9876311 0 1111122333 5799999999999999999999
Q ss_pred cEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCC-CCChHHHHHHHHHh-CCCCHHHHHHH-HHHHHHHcC
Q 025169 159 PVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVF-STSVSREYDLAASA-FSLGRREMFQL-AKSAVKFIF 235 (257)
Q Consensus 159 ~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~-~~~l~~E~~~a~~~-~~ls~~~v~~~-~~n~~~~~~ 235 (257)
.+++||.+|..++. +..|+++++++|+++++|||.+..+ ..++++|++.+... .++++.+++++ +.|++++.+
T Consensus 321 ~~~~~p~~~~~~~~----~~~~l~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~n~A~~lg 396 (420)
T 2imr_A 321 AVVTCPRSNHHLEC----GTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQLYPGLDPRVLVRAAVKGGQRVVG 396 (420)
T ss_dssp CEEECHHHHHHTTC----CCCCHHHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHC
T ss_pred eEEECHHHHHHhcc----CCCCHHHHHHCCCeEEEECCCCccCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999987764 6789999999999999999986543 46899999988764 58999999998 589999999
Q ss_pred CCh
Q 025169 236 ANG 238 (257)
Q Consensus 236 ~~~ 238 (257)
+++
T Consensus 397 l~~ 399 (420)
T 2imr_A 397 GRT 399 (420)
T ss_dssp --C
T ss_pred CCC
Confidence 864
No 23
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=99.70 E-value=4.8e-17 Score=148.24 Aligned_cols=168 Identities=15% Similarity=0.098 Sum_probs=131.1
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccC---------CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcC
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSG---------NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL 135 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g---------~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg 135 (257)
+++++.+.++...+...+. +.+-..| ....++++.++++++.|+++|+++++|+.+ ...+..+++.|
T Consensus 170 ~~~~~~~~v~~~~~~g~~~-ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~---~~~i~~~l~~g 245 (423)
T 3feq_A 170 GVEGVRLAVREEIQKGATQ-IKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYT---GRAIARAVRCG 245 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSS-EEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEE---HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCE-EEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHcC
Confidence 4566666666555443332 2322221 122568899999999999999999999973 45678888899
Q ss_pred CcEEeecccccHHHHHHHhcCCCcE-----------------EecccccceeccccCCCcccHHHHHhcCCCEEecCCCC
Q 025169 136 PQRIGHACCFEEEEWRKLKSSKIPV-----------------EICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDS 198 (257)
Q Consensus 136 ~~ri~Hg~~l~~~~~~~l~~~~i~v-----------------~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~ 198 (257)
.++|.||..++++++++++++|+.+ .+||.+|.+++........|++.|+++|++|++|||++
T Consensus 246 ~~~i~H~~~~~~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~ 325 (423)
T 3feq_A 246 VRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLL 325 (423)
T ss_dssp CCEEEEEEECCHHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCC
T ss_pred CCEEeccCcCCHHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 9999999999999999999999998 56888887765432234678999999999999999998
Q ss_pred CCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 199 GVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 199 ~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
+....++..|++...+ .+|+.+++++ +.|+++++++++
T Consensus 326 ~~~~~~~~~e~~~~~~--~ls~~eal~~aT~~~A~~lg~~~ 364 (423)
T 3feq_A 326 GEMHAFQSGEFRIRAE--VLGNLEALRSATTVAAEIVNMQG 364 (423)
T ss_dssp GGGGGGTTHHHHHHHT--TSCHHHHHHTTTHHHHHHTTCBT
T ss_pred CCCCcchHHHHHHHHh--hCCHHHHHHHHHHHHHHHhCCCC
Confidence 6555567789888765 3999999998 589999999875
No 24
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=99.70 E-value=1.6e-16 Score=148.08 Aligned_cols=196 Identities=14% Similarity=0.097 Sum_probs=134.4
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC--------------CCHH-HHHHHHHHHHhhCC--C-ceEEEeccC-CC-CCCC
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR--------------ETTE-AAMETVKLALEMRD--L-GVVGIDLSG-NP-TKGE 97 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~--------------~~~e-~~~~~~~~~~~~~~--~-~vvg~~l~g-~~-~~~~ 97 (257)
+.++...++.++.|+|+.+.....+. ..++ ...+..++...+.. . +.+.+.++. .. ..++
T Consensus 148 ~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
T 2paj_A 148 DSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSIS 227 (492)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSC
T ss_pred chHHHHHHHHHHcCCEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCC
Confidence 34555556666789999877654421 0122 23333344445543 1 234333332 23 4678
Q ss_pred hhcHHHHHHHHHHcCCceeeecCCCCCH----------hhHHHHHhcC---Cc-EEeecccccHHHHHHHhcCCCcEEec
Q 025169 98 WTTFLPALKFAREQGLQITLHCGEIPNK----------EEIQSMLDFL---PQ-RIGHACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~Ha~E~~~~----------~~i~~~l~lg---~~-ri~Hg~~l~~~~~~~l~~~~i~v~~c 163 (257)
++.++++++.|++.|+++++|+.|.... ..+..+...| ++ .+.||++++++++++++++|+.+++|
T Consensus 228 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~ 307 (492)
T 2paj_A 228 PREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHC 307 (492)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC-------------CCCHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEEEEC
Confidence 8999999999999999999999875321 1122222333 33 58999999999999999999999999
Q ss_pred ccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCC-CCChHHHHHHHHHh----------------------CCCCH
Q 025169 164 LTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVF-STSVSREYDLAASA----------------------FSLGR 220 (257)
Q Consensus 164 P~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~-~~~l~~E~~~a~~~----------------------~~ls~ 220 (257)
|.||.+++. +.+|++.++++|+++++|||++..+ +.+++++++.+... .++++
T Consensus 308 p~~~~~l~~----~~~p~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 383 (492)
T 2paj_A 308 PQSNGRLGS----GICPVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASI 383 (492)
T ss_dssp HHHHHCC---------CCTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC-------------------CCH
T ss_pred chhhcccCC----CCCCHHHHHHCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCH
Confidence 999998764 5679999999999999999987653 46999999876421 24899
Q ss_pred HHHHHH-HHHHHHHcCCC
Q 025169 221 REMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 221 ~~v~~~-~~n~~~~~~~~ 237 (257)
.+++++ +.|++++++++
T Consensus 384 ~~al~~aT~~~A~~lgl~ 401 (492)
T 2paj_A 384 AEVIHWGTAGGARVMGLD 401 (492)
T ss_dssp HHHHHHHTHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 999998 58999999986
No 25
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.70 E-value=1.9e-16 Score=144.59 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=121.5
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
.++++.+.++++.|++.|+++++|+.|....+.+..+.+.|..++.|++++++++++++++.|+.+++||.+|..++.
T Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~-- 296 (416)
T 2q09_A 219 GFSLAQTEQVYLAADQYGLAVKGHMDQLSNLGGSTLAANFGALSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFLKE-- 296 (416)
T ss_dssp SBCHHHHHHHHHHHHHTTCEEEEEESSSCCCSHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTC--
T ss_pred cCCHHHHHHHHHHHHHCCCcEEEEECCCCchHHHHHHHHcCCCEEeecccCCHHHHHHHHHcCCeEEEcCccHHhhcc--
Confidence 457899999999999999999999988654345566667899999999999999999999999999999999987632
Q ss_pred CCCcccHHHHHhcCCCEEecCCCCC-CCC-CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 175 SLDIHHFVDLYKAQHPLVLCTDDSG-VFS-TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 175 ~~~~~pi~~l~~~Gv~v~lgTD~~~-~~~-~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.+..|++.++++|+++++|||.+. +++ .+++.+++.+....++|+.+++++ +.|+++++++++
T Consensus 297 -~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 362 (416)
T 2q09_A 297 -TKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQE 362 (416)
T ss_dssp -CCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred -ccccCHHHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 156799999999999999999864 333 699999998877789999999998 689999999865
No 26
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=99.69 E-value=1.7e-16 Score=145.48 Aligned_cols=168 Identities=15% Similarity=0.100 Sum_probs=131.6
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccC---------CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcC
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSG---------NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL 135 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g---------~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg 135 (257)
+++++.+.++...+...+. +.+...| ....++++.++++++.|+++|+++++|+. +...+..+++.|
T Consensus 173 ~~~~~~~~v~~~~~~g~~~-ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~---~~~~i~~al~~G 248 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQ-IKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY---TPAAIARAVRCG 248 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSS-EEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC---SHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCE-EEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC---ChHHHHHHHHcC
Confidence 4666666666555444332 2222221 12256889999999999999999999996 356788889999
Q ss_pred CcEEeecccccHHHHHHHhcCCCcE-----------------EecccccceeccccCCCcccHHHHHhcCCCEEecCCCC
Q 025169 136 PQRIGHACCFEEEEWRKLKSSKIPV-----------------EICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDS 198 (257)
Q Consensus 136 ~~ri~Hg~~l~~~~~~~l~~~~i~v-----------------~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~ 198 (257)
.++|.||.+++++++++++++|+.+ .+||.+|.+++........|++.|+++|++|++|||.+
T Consensus 249 ~~~i~H~~~~~~~~~~~~~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~ 328 (426)
T 2r8c_A 249 VRTIEHGNLIDDETARLVAEHGAYVVPTLVTYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLL 328 (426)
T ss_dssp CSEEEECTTCCHHHHHHHHHTTCEEECCTHHHHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCC
T ss_pred CCEEecCCcCCHHHHHHHHHcCCeEeechHHHHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 9999999999999999999999988 35788887776543345678999999999999999998
Q ss_pred CCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 199 GVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 199 ~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
+....++..|+....+ .+|+.+++++ +.|+++++++++
T Consensus 329 ~~~~~~~~~e~~~~~~--~l~~~eal~~aT~~~A~~lg~~~ 367 (426)
T 2r8c_A 329 GEAQRLQSDEFRILAE--VLSPAEVIASATIVSAEVLGMQD 367 (426)
T ss_dssp GGGGGGTTHHHHHHTT--TSCHHHHHHHTTHHHHHHTTCTT
T ss_pred CCCCcchHHHHHHHHh--cCCHHHHHHHHHHHHHHHhCCCC
Confidence 6555567788887754 4999999998 589999999875
No 27
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.66 E-value=5.1e-16 Score=141.69 Aligned_cols=141 Identities=15% Similarity=0.124 Sum_probs=120.6
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
.++++.++++++.|+++|+++++|+.+......+..+.+.|..++.|+.++++++++++++.|+.+.+||.+|+.+..
T Consensus 231 ~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~l~~-- 308 (419)
T 2puz_A 231 AFSVKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNALSADHLEYLDETGAKALAKAGTVAVLLPGAFYALRE-- 308 (419)
T ss_dssp SBCHHHHHHHHHHHHHTTCCBEEEESSSSCCSHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHHTC--
T ss_pred CcCHHHHHHHHHHHHHCCCcEEEEecccccCCHHHHHHhcCCceehHhccCCHHHHHHHHHcCCcEEECCchhhhhcc--
Confidence 457789999999999999999999988654445556667888999999999999999999999999999999986622
Q ss_pred CCCcccHHHHHhcCCCEEecCCCCC-CCC-CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 175 SLDIHHFVDLYKAQHPLVLCTDDSG-VFS-TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 175 ~~~~~pi~~l~~~Gv~v~lgTD~~~-~~~-~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.+..|++.|+++|+++++|||.+. +++ .++..+++.+....++|+.+++++ +.|+++++++++
T Consensus 309 -~~~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~~~ 374 (419)
T 2puz_A 309 -KQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLFRMTVEECLTATTRNAAKALGLLA 374 (419)
T ss_dssp -CCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred -cccccHHHHHHCCCeEEEECCCCCCCCccccHHHHHHHhccccCCCHHHHHHHHHHHHHHHcCCCC
Confidence 145799999999999999999764 344 599999998877779999999998 689999999865
No 28
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.63 E-value=6.1e-15 Score=134.58 Aligned_cols=139 Identities=11% Similarity=0.077 Sum_probs=112.2
Q ss_pred CCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccc-------
Q 025169 94 TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTS------- 166 (257)
Q Consensus 94 ~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~S------- 166 (257)
..++++.++++++.|+++|+++++|+. +...+..++++|.++|+||++++++++++++++|+. +||+.
T Consensus 211 ~~~~~~~l~~~~~~A~~~g~~v~~H~~---~~~~i~~~~~~g~~~i~H~~~~~~~~i~~l~~~gv~--v~p~~~~~~~~~ 285 (418)
T 2qs8_A 211 PQFTQEEVDAVVSAAKDYGMWVAVHAH---GAEGMKRAIKAGVDSIEHGTFMDLEAMDLMIENGTY--YVPTISAGEFVA 285 (418)
T ss_dssp BCSCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHHHHTCSEEEECTTCCHHHHHHHHHHTCE--EECCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEEC---CHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHCCCE--EeeeechHHHhh
Confidence 346789999999999999999999995 345677788889999999999999999999999975 57873
Q ss_pred -cceeccccCCC------------cccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHH
Q 025169 167 -NIRTETISSLD------------IHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVK 232 (257)
Q Consensus 167 -N~~l~~~~~~~------------~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~ 232 (257)
|.....+++.. ..|++.++++|+++++|||.+.....+++.|++.+.+ .++++.+++++ +.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~~~~e~~~~~~-~gls~~eal~~~T~n~A~ 364 (418)
T 2qs8_A 286 EKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQKHGTNWKEFVYMVE-NGMPAMKAIQSATMETAK 364 (418)
T ss_dssp HHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTTBCTTCTTHHHHHHHH-TTCCHHHHHHHTTHHHHH
T ss_pred hhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCcCCcchHHHHHHHHHH-cCCCHHHHHHHHHHHHHH
Confidence 21111222211 2578999999999999999875334688999998776 49999999998 689999
Q ss_pred HcCCCh
Q 025169 233 FIFANG 238 (257)
Q Consensus 233 ~~~~~~ 238 (257)
++++++
T Consensus 365 ~lg~~~ 370 (418)
T 2qs8_A 365 LLRIED 370 (418)
T ss_dssp HTTCTT
T ss_pred HhCCCC
Confidence 999875
No 29
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=99.62 E-value=1.1e-15 Score=140.27 Aligned_cols=167 Identities=13% Similarity=0.092 Sum_probs=121.8
Q ss_pred HHHHHHHHhhCCCceEEEeccCCCCC--CChhcHHHHHHHHHHcCCceeeecCCCCCHh--hH----HHHHhcCC---cE
Q 025169 70 METVKLALEMRDLGVVGIDLSGNPTK--GEWTTFLPALKFAREQGLQITLHCGEIPNKE--EI----QSMLDFLP---QR 138 (257)
Q Consensus 70 ~~~~~~~~~~~~~~vvg~~l~g~~~~--~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~--~i----~~~l~lg~---~r 138 (257)
.+.++...+... +++++.. ..++. ++++.++++++.|+++|+++++|+.|..... .+ ..+.++|. .+
T Consensus 170 ~~~~~~~~~~g~-~~~~~~~-~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~g~~~~~~ 247 (430)
T 1ra0_A 170 EALLEEALRLGA-DVVGAIP-HFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVT 247 (430)
T ss_dssp HHHHHHHHHTTC-SEECCCG-GGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHHHHHHHHHHHTCGGGEE
T ss_pred HHHHHHHHHhCC-CeEeeee-cccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHHHHHhCCCCCEE
Confidence 344444444433 3555432 23444 5778899999999999999999998864321 11 12223443 57
Q ss_pred EeecccccHH-------HHHHHhcCCCcEEecccccceecc----ccC-CCcccHHHHHhcCCCEEecCCCCC----CCC
Q 025169 139 IGHACCFEEE-------EWRKLKSSKIPVEICLTSNIRTET----ISS-LDIHHFVDLYKAQHPLVLCTDDSG----VFS 202 (257)
Q Consensus 139 i~Hg~~l~~~-------~~~~l~~~~i~v~~cP~SN~~l~~----~~~-~~~~pi~~l~~~Gv~v~lgTD~~~----~~~ 202 (257)
++|+++++++ ++++++++|+.+++||.||+.++. .+. .+..|+++|+++|+++++|||++. .++
T Consensus 248 i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~ 327 (430)
T 1ra0_A 248 ASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLG 327 (430)
T ss_dssp EEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHHTTTTCCSSCCCCCCCHHHHHHTTCCEEECCBCSSBTTBSCC
T ss_pred EEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhhccccCCCCCcCCCCCHHHHHHCCCEEEEeCCCCcccCCCCC
Confidence 9999999764 899999999999999999987652 111 256789999999999999999874 333
Q ss_pred -CChHHHHHHHHHhCC----CCHHHHHHH-HHHHHHHcCCCh
Q 025169 203 -TSVSREYDLAASAFS----LGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 203 -~~l~~E~~~a~~~~~----ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
.++++|++.+....+ +++.+++++ +.|+++++++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~ 369 (430)
T 1ra0_A 328 TANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQD 369 (430)
T ss_dssp CCCHHHHHHHHHHHTTCCSHHHHHGGGGGGTHHHHHHTTCSS
T ss_pred CCCHHHHHHHHHHHHccCCcccHHHHHHHHHHHHHHHhCCCC
Confidence 699999998876554 478888887 689999998763
No 30
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.60 E-value=2.2e-15 Score=137.08 Aligned_cols=185 Identities=13% Similarity=0.073 Sum_probs=130.5
Q ss_pred hHhhcccCCCcEEEEEEEeeCC--CCHHHHHHHHHHHHhhCCC-ceE--EEeccCCCCCCChhcHHHHHHHHHHcCCcee
Q 025169 42 DACNGTRGKKIYVRLLLSIDRR--ETTEAAMETVKLALEMRDL-GVV--GIDLSGNPTKGEWTTFLPALKFAREQGLQIT 116 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r~--~~~e~~~~~~~~~~~~~~~-~vv--g~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~ 116 (257)
.+.++.++.|+|+.+...+... ...+...+..+....+.+. +.+ ++.+ ..++.++++.+.++++.|++.|++++
T Consensus 120 ~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~ 198 (406)
T 1p1m_A 120 WIAKAVRDFGMRALLTRGLVDSNGDDGGRLEENLKLYNEWNGFEGRIFVGFGP-HSPYLCSEEYLKRVFDTAKSLNAPVT 198 (406)
T ss_dssp HHHHHHHHHCCEEEEEEEECCBTTBCTTHHHHHHHHHHHHTTGGGTEEEEEEE-CCTTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCEEEEEcccccCCCCHHHHHHHHHHHHHHhhCCCCcEEEEEec-CccCcCCHHHHHHHHHHHHHCCCcEE
Confidence 3444455578888665544431 1122223333444445432 222 3333 23456788999999999999999999
Q ss_pred eecCCCC-CHhhHHH-----HHhcCC--cEEeecc---cccHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHH
Q 025169 117 LHCGEIP-NKEEIQS-----MLDFLP--QRIGHAC---CFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLY 185 (257)
Q Consensus 117 ~Ha~E~~-~~~~i~~-----~l~lg~--~ri~Hg~---~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~ 185 (257)
+|+.|+. ....+.+ ..+.|. ..+.|++ +++++++++++ .+||.+|++++. +..|+.+++
T Consensus 199 ~H~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~H~~~~~~~~~~~~~~~~------~~~p~~~~~~~~----~~~~~~~~~ 268 (406)
T 1p1m_A 199 IHLYETSKEEYDLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFV------SHNPASNLKLGN----GIAPVQRMI 268 (406)
T ss_dssp EEESCSTTCCCCTHHHHTTTTTTSCEEEEECTTCCGGGTTTTTTSSEEE------EECHHHHHHTTC----CCCCHHHHH
T ss_pred EEcCCCchHHHHHHHhhhCCHhHcCcceeEeeeccCcccCCHHHHHHHH------HhCcHHHhhcCC----CcCcHHHHH
Confidence 9998763 2223333 112344 6799999 99988887776 789999988765 567999999
Q ss_pred hcCCCEEecCCCCCCCC-CChHHHHHHHHH------hCCCCHHHHHHH-HHHHHHHcCCC
Q 025169 186 KAQHPLVLCTDDSGVFS-TSVSREYDLAAS------AFSLGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 186 ~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~------~~~ls~~~v~~~-~~n~~~~~~~~ 237 (257)
+.|+++++|||++..++ .++++|++.+.. ..++|+.+++++ +.|++++.+++
T Consensus 269 ~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 328 (406)
T 1p1m_A 269 EHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFK 328 (406)
T ss_dssp HTTCEEEECCCCTTTTSCCCHHHHHHHHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTCS
T ss_pred hCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 99999999999987654 699999988764 247999999998 58999999875
No 31
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=99.58 E-value=2e-14 Score=130.19 Aligned_cols=162 Identities=17% Similarity=0.215 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHhhCCCceEE-EeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCH--hhH----HHHHhcCC---
Q 025169 67 EAAMETVKLALEMRDLGVVG-IDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK--EEI----QSMLDFLP--- 136 (257)
Q Consensus 67 e~~~~~~~~~~~~~~~~vvg-~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~--~~i----~~~l~lg~--- 136 (257)
++..+.++.+.+...+ +++ ++. +..+..+++.++++++.|+++|+++++|+.|.... ..+ ..+.+.|.
T Consensus 167 ~~~~~~~~~~~~~g~~-~~~~~~p-~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~g~~~~ 244 (403)
T 2qt3_A 167 LESESLIRKSLDMGCD-LVGGVDP-ATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYSINRLAQKTIENGYKGR 244 (403)
T ss_dssp TTHHHHHHHHHHTTCS-EEECBCT-TTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred cchHHHHHHHHhcCCC-eEEEecC-CCCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccchhHHHHHHHHHHHHcCCCCC
Confidence 3345556655544333 443 322 22334556889999999999999999999887432 122 22223554
Q ss_pred cEEeecccccH-------HHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCC----CCC-CC
Q 025169 137 QRIGHACCFEE-------EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSG----VFS-TS 204 (257)
Q Consensus 137 ~ri~Hg~~l~~-------~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~----~~~-~~ 204 (257)
.++.|++++++ +++++++++|+.+++||.++ . +..|+++|+++|+++++|||++. .++ .+
T Consensus 245 ~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~~----~----~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~ 316 (403)
T 2qt3_A 245 VTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSST----P----PTMPVIKLLEAGINLGCASDNIRDFWVPFGNGD 316 (403)
T ss_dssp EEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTTC----C----TTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCC
T ss_pred eEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCCC----C----CCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCC
Confidence 68999999875 89999999999999999753 1 45799999999999999999873 344 48
Q ss_pred hHHHHHHHHHhCC----CCHHHHHHH-HHHHHHHcCCCh
Q 025169 205 VSREYDLAASAFS----LGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 205 l~~E~~~a~~~~~----ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
++++++.+....+ +++.+++++ +.|++++.++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~ 355 (403)
T 2qt3_A 317 MVQGALIETQRLELKTNRDLGLIWKMITSEGARVLGIEK 355 (403)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHTTHHHHHHHTCGG
T ss_pred HHHHHHHHHHHhCcCCccCHHHHHHHHHHHHHHhcCCCc
Confidence 9999988776555 467888887 689999999864
No 32
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=99.54 E-value=1.5e-13 Score=124.65 Aligned_cols=139 Identities=9% Similarity=0.071 Sum_probs=110.9
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceec---
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTE--- 171 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~--- 171 (257)
.++++.++++++.|++.|+++++|+.+ ...+..+++.|.++|.||++++++++++++++|+.++.||.++..+.
T Consensus 202 ~~~~~~l~~~~~~A~~~g~~v~~H~~~---~~~i~~~~~~g~~~i~H~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~ 278 (408)
T 3be7_A 202 QFTLEEMKAIVDEAHNHGMKVAAHAHG---LIGIKAAIKAGVDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEG 278 (408)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHHTCSEEEECTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHCCCEEeeeecHHHHhhhhc
Confidence 457889999999999999999999964 44677777889999999999999999999999998766654321110
Q ss_pred ---cccC-----------CCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCC
Q 025169 172 ---TISS-----------LDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFA 236 (257)
Q Consensus 172 ---~~~~-----------~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~ 236 (257)
.+++ ....|++.++++|+++++|||.+.....++..|++.+.+. ++|+.+++++ +.|++++.++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p~~~~~~~~~~~~~~-gls~~~al~~~T~n~A~~lgl 357 (408)
T 3be7_A 279 AKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHGDNAKQFAYMVEW-GMTPLEAIQASTIKTATLFGI 357 (408)
T ss_dssp TTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBCTTCGGGHHHHHHHT-TCCHHHHHHTTTHHHHHHHTC
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCchHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCC
Confidence 1110 0125789999999999999998753346788999888764 9999999998 6899999988
Q ss_pred C
Q 025169 237 N 237 (257)
Q Consensus 237 ~ 237 (257)
+
T Consensus 358 ~ 358 (408)
T 3be7_A 358 E 358 (408)
T ss_dssp S
T ss_pred C
Confidence 6
No 33
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.53 E-value=3.1e-14 Score=135.02 Aligned_cols=137 Identities=16% Similarity=0.184 Sum_probs=111.5
Q ss_pred CChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCC-----cEEeecccccHHHHHHHhcCCCcEEecccccce-
Q 025169 96 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP-----QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIR- 169 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~-----~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~- 169 (257)
+++++++++++.|+++|+++++|+. +...+..+++.+. .+|.||.+++++++++|++.|+.+++||+++..
T Consensus 326 ~~~e~l~~~v~~A~~~G~~v~~Ha~---gd~ai~~~l~a~~~~~~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~~~~~ 402 (534)
T 3icj_A 326 MNKDEIVEVIERAKPLGLDVAVHAI---GDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSD 402 (534)
T ss_dssp SCHHHHHHHHHHHTTTTCEEEEEEC---SHHHHHHHHHHHHHHTCCCEEEECCBCCHHHHHHHHHHTCEEEECTTHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc---ChHHHHHHHHHHHhccCCCEEEECCCCCHHHHHHHHHcCCeEEEccccccch
Confidence 4778999999999999999999995 3455555555433 799999999999999999999999999998752
Q ss_pred ------eccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHh------CCCCHHHHHHH-HHHHHHHcCC
Q 025169 170 ------TETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASA------FSLGRREMFQL-AKSAVKFIFA 236 (257)
Q Consensus 170 ------l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~------~~ls~~~v~~~-~~n~~~~~~~ 236 (257)
++.-..-+..|++.|+++ ++|++|||.|.. ..+++.+++.+... .++|+.+++++ |.|+++++++
T Consensus 403 ~~~~~~lg~~r~~~~~p~~~l~~~-v~valGSD~p~~-~~~p~~~~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~ 480 (534)
T 3icj_A 403 WWIVNRVGEERAKWAYRLKTLSSI-TKLGFSTDSPIE-PADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLA 480 (534)
T ss_dssp TTHHHHHHHHHGGGBTCHHHHHHH-SCEEECCTTTTS-CCCHHHHHHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTC
T ss_pred hHHHHhhCHHHHhccHHHHHHHHh-CCEEeecCCCCC-CCCHHHHHHHHHhccccCcccCCCHHHHHHHHHHHHHHHhCC
Confidence 221011145799999999 999999999854 46889998877653 47999999998 6899999987
Q ss_pred C
Q 025169 237 N 237 (257)
Q Consensus 237 ~ 237 (257)
+
T Consensus 481 e 481 (534)
T 3icj_A 481 E 481 (534)
T ss_dssp T
T ss_pred C
Confidence 6
No 34
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.45 E-value=2.5e-13 Score=123.43 Aligned_cols=135 Identities=12% Similarity=0.122 Sum_probs=102.6
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHH-hcCCc-EEeecccccHHHHHHHhcCCCcEEeccc----ccceecc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSML-DFLPQ-RIGHACCFEEEEWRKLKSSKIPVEICLT----SNIRTET 172 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l-~lg~~-ri~Hg~~l~~~~~~~l~~~~i~v~~cP~----SN~~l~~ 172 (257)
+...+.+..+.+.|+++.+|+.+..+.....+.+ ++|.+ +|+||+..++ +++++++.|+.+++||+ +|..+.
T Consensus 207 ~~~~e~l~~~~~~~~~v~iHa~~~~~i~~~~~~~~~~g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~~~~~- 284 (396)
T 3ooq_A 207 DLKMEVGEMVLRKKIPARMHAHRADDILTAIRIAEEFGFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTKLELK- 284 (396)
T ss_dssp CHHHHHHHHHHTTSSCEEEEECSHHHHHHHHHHHHHHTCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCSGGGT-
T ss_pred ChhHHHHHHHHcCCCcEEEEECchhHHHHHHHHHHHcCCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccchhHH-
Confidence 3445555666688999999997653222222222 36876 8999998875 59999999999999995 444332
Q ss_pred ccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 173 ISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 173 ~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
..+..|++.|+++|++|++|||+|.....++..++..+.. .+++.++++++ +.|+++++++++
T Consensus 285 --~~~~~~~~~l~~~Gv~v~lgtD~~~~~~~~l~~~~~~~~~-~gl~~~~al~~~T~n~A~~lg~~~ 348 (396)
T 3ooq_A 285 --DLTMETIAKLLKDGVLIALMCDHPVIPLEFATVQAATAMR-YGAKEEDLLKILTVNPAKILGLED 348 (396)
T ss_dssp --TCCTTHHHHHHHTTCCEEECCTTTTSCGGGHHHHHHHGGG-GTCCHHHHHHTTTHHHHHHTTCTT
T ss_pred --hhhhHHHHHHHHCCCEEEEEcCCCccCccHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 1256799999999999999999987655677777766654 69999999998 689999999875
No 35
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=99.43 E-value=2.4e-12 Score=118.88 Aligned_cols=139 Identities=13% Similarity=0.078 Sum_probs=110.3
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHh------cCCCcEEecccc--
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLK------SSKIPVEICLTS-- 166 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~------~~~i~v~~cP~S-- 166 (257)
.++++.+.++++.|+++|+++++|+.+ ...+..+++.|.+++.|+.+++++++++++ +.|+.+ ||++
T Consensus 223 ~~~~~~l~~~~~~a~~~g~~v~~H~~~---~~~i~~~~~~G~~~i~H~~~~~~~~~~~~~~~~~~~~~g~~v--~p~~~~ 297 (458)
T 2p9b_A 223 QMSVEQMRAICDEAHQYGVIVGAHAQS---PEGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSAL--IPTLSA 297 (458)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECS---HHHHHHHHHHTCSEEEECCCCCHHHHHHHHCCTTSTTSCCEE--ECCHHH
T ss_pred cCCHHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHcCCCEEEECCCCCHHHHHHHhcccccccCCeEE--Eeecch
Confidence 457788999999999999999999953 456777788899999999999999999999 999764 7887
Q ss_pred cce---ec----cccC-----------CCcccHHHHHhcCCCEEecCCCCCCC-C-CChHHHHHHHHHhCCCCHHHHHHH
Q 025169 167 NIR---TE----TISS-----------LDIHHFVDLYKAQHPLVLCTDDSGVF-S-TSVSREYDLAASAFSLGRREMFQL 226 (257)
Q Consensus 167 N~~---l~----~~~~-----------~~~~pi~~l~~~Gv~v~lgTD~~~~~-~-~~l~~E~~~a~~~~~ls~~~v~~~ 226 (257)
|.. +. .+++ ....|++.++++|+++++|||.+..+ . .++..|++.+.+..++|+.+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~e~~~~~~~~~ls~~~al~~ 377 (458)
T 2p9b_A 298 GLPLTLLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAYAGFSPAEALHA 377 (458)
T ss_dssp HHHHHHSCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCTTCHHHHHHHHHHHHCCCHHHHHHH
T ss_pred hhHHHhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCccccHHHHHHHHHHhcCCCHHHHHHH
Confidence 431 11 0110 11357889999999999999964322 2 578999988776569999999998
Q ss_pred -HHHHHHHcCCCh
Q 025169 227 -AKSAVKFIFANG 238 (257)
Q Consensus 227 -~~n~~~~~~~~~ 238 (257)
+.|+++++++++
T Consensus 378 ~T~~~A~~lgl~~ 390 (458)
T 2p9b_A 378 ATAVNASILGVDA 390 (458)
T ss_dssp HTHHHHHHTTCTT
T ss_pred HHHHHHHHhCCcC
Confidence 589999999864
No 36
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.34 E-value=5.3e-12 Score=113.62 Aligned_cols=135 Identities=8% Similarity=0.089 Sum_probs=107.1
Q ss_pred CChhcHHHHHHHHHHcCCceeeecCCCC----CHhhHHHHHhcCCcEEeeccc----ccHHHHHHHhcCCCcEEeccccc
Q 025169 96 GEWTTFLPALKFAREQGLQITLHCGEIP----NKEEIQSMLDFLPQRIGHACC----FEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~Ha~E~~----~~~~i~~~l~lg~~ri~Hg~~----l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
.+++.+.++++.|+++|+++++|+.|.. +.+.+..+++.|.+.+.|+.+ +++++++.++++|+.+..||. +
T Consensus 171 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~~~~~~G~~~i~H~~~~~~~~~~~~~~~~~~~g~~vl~~~~-~ 249 (386)
T 2vun_A 171 KNPEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVIKTKPDVVSHINGGPTAISVQEVDRIMDETDFAMEIVQ-C 249 (386)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHHHHCCSEEETTTCSSSCCCHHHHHHHHHHCCCEEEEES-S
T ss_pred CCHHHHHHHHHHHHHCCCeEEEecCCccccccCHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHcCCeEEEecc-C
Confidence 4788999999999999999999998542 234566777789999999998 899999999999998844443 1
Q ss_pred ceeccccCCCcccHHHHHhcCC--CEEecCCCC-CC--CC-CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCC
Q 025169 168 IRTETISSLDIHHFVDLYKAQH--PLVLCTDDS-GV--FS-TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFA 236 (257)
Q Consensus 168 ~~l~~~~~~~~~pi~~l~~~Gv--~v~lgTD~~-~~--~~-~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~ 236 (257)
-.... ...++++++++|+ ++++|||.| +. +. .++..|++.+.+ .+++.++++++ +.|+++..++
T Consensus 250 g~~~~----~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~~-~~ls~~~~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 250 GNPKI----ADYVARRAAEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIASM-SDIDPEVAVCMATGNSTAVYGL 320 (386)
T ss_dssp SCHHH----HHHHHHHHHHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHHH-SCCCHHHHHHHHTHHHHHHHTC
T ss_pred Ccccc----cHHHHHHHHHcCCCceeEEecCCCCCCCCCcchhHHHHHHHHhh-cCCCHHHHHHHHhHHHHHHcCC
Confidence 10111 3468999999999 999999986 32 22 467888887754 79999999998 5899999887
No 37
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=99.08 E-value=7.2e-09 Score=94.34 Aligned_cols=143 Identities=19% Similarity=0.169 Sum_probs=112.1
Q ss_pred CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh----------hHHHHHhc---CC-cEEeecccccHHHHHHHhcCC
Q 025169 92 NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE----------EIQSMLDF---LP-QRIGHACCFEEEEWRKLKSSK 157 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~----------~i~~~l~l---g~-~ri~Hg~~l~~~~~~~l~~~~ 157 (257)
.+...+.+.+.++...|++.|+++++|+.+..... .+...... +. ..+.|++++++.+++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 312 (479)
T 3hpa_A 233 SPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTG 312 (479)
T ss_dssp CTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHHhcCCeEEeecccchHHHHHHHHHcCCchHHHHhhhccccccceeeeeEecchhHHHHHHhcC
Confidence 34566788899999999999999999987653210 11111122 23 468999999999999999999
Q ss_pred CcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHHh-------CCCCHHHHHHH-HH
Q 025169 158 IPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAASA-------FSLGRREMFQL-AK 228 (257)
Q Consensus 158 i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~~-------~~ls~~~v~~~-~~ 228 (257)
+.+.+||.|+...+. +..|+..+++.|+++++|||+..+++ .....+++.+... .++|..+++++ +.
T Consensus 313 ~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~eal~~~T~ 388 (479)
T 3hpa_A 313 TGVAHCPCSNMRLAS----GIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATL 388 (479)
T ss_dssp CEEEECHHHHHHTTC----CCCCHHHHHHHTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTH
T ss_pred Cceeecccccccccc----CccchhHHHhcCCcEEeeccccccCCCccHHHHHHHHHHHHhhhccccCCCHHHHHHHHHH
Confidence 999999999988765 67899999999999999999887765 5677776554432 36999999998 68
Q ss_pred HHHHHcCCCh
Q 025169 229 SAVKFIFANG 238 (257)
Q Consensus 229 n~~~~~~~~~ 238 (257)
|+++..++++
T Consensus 389 ~~A~~lgl~~ 398 (479)
T 3hpa_A 389 GGAKVLNRDD 398 (479)
T ss_dssp HHHHHHTCSS
T ss_pred HHHHHhCCCC
Confidence 9999999853
No 38
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.07 E-value=8.2e-11 Score=106.06 Aligned_cols=134 Identities=10% Similarity=0.012 Sum_probs=99.3
Q ss_pred hcHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhcCCc--------------------------------EEeecccc
Q 025169 99 TTFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDFLPQ--------------------------------RIGHACCF 145 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~lg~~--------------------------------ri~Hg~~l 145 (257)
+.+.++++.|+++|+++++ |+.|+ .+.+..+++.|.+ .+.||+++
T Consensus 175 ~~~~~~~~~a~~~g~~v~~gH~~~~--~~~~~~~~~~G~~~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~ 252 (382)
T 1yrr_A 175 MVPAEVISKLANAGIVVSAGHSNAT--LKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHV 252 (382)
T ss_dssp GSCHHHHHHHHHTTCEEEECSCCCC--HHHHHHHHHHTCCEESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSS
T ss_pred CChHHHHHHHHHCCCEEEEECCCCC--HHHHHHHHHcCCCeeEECCCCCCccccCCcchhhHhhcCCcceeeecCccccc
Confidence 4456789999999999998 99876 4555555553321 56788889
Q ss_pred cHHHHHHHhcCC-CcEEecccccceeccccCCCc---ccHHHHHhcCCCE-EecCCCCCCCCCChHHHHHHHHHhCCCCH
Q 025169 146 EEEEWRKLKSSK-IPVEICLTSNIRTETISSLDI---HHFVDLYKAQHPL-VLCTDDSGVFSTSVSREYDLAASAFSLGR 220 (257)
Q Consensus 146 ~~~~~~~l~~~~-i~v~~cP~SN~~l~~~~~~~~---~pi~~l~~~Gv~v-~lgTD~~~~~~~~l~~E~~~a~~~~~ls~ 220 (257)
++++++++++.+ ..+.+||.++...+ ++.+. .+++.++++|+++ +.|||.+ ...++++||+.+....++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~d~~~~~g--~~~~~~~~~~~~~~~~~Gv~~~~~Gt~~g--~~~~~~~~~~~~~~~~g~~~ 328 (382)
T 1yrr_A 253 DYANIRNAKRLKGDKLCLVTDATAPAG--ANIEQFIFAGKTIYYRNGLCVDENGTLSG--SSLTMIEGVRNLVEHCGIAL 328 (382)
T ss_dssp CHHHHHHHHHHHGGGEEEECCBCTTTT--SCCSEEEETTEEEEECSSCEECTTCCEEE--BCCCHHHHHHHHHHHHCCCH
T ss_pred CHHHHHHHHHcCCCcEEEECcChHhcC--CCCceEEECCEEEEEECCEEEeCCCcCcC--CccCHHHHHHHHHHHhCCCH
Confidence 999999999887 67788887754433 11011 1256788999988 5566642 23589999999986679999
Q ss_pred HHHHHHH-HHHHHHcCCCh
Q 025169 221 REMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 221 ~~v~~~~-~n~~~~~~~~~ 238 (257)
.++++++ .|+++++++++
T Consensus 329 ~~al~~aT~~~A~~lg~~~ 347 (382)
T 1yrr_A 329 DEVLRMATLYPARAIGVEK 347 (382)
T ss_dssp HHHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 9999984 89999999875
No 39
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.00 E-value=6e-09 Score=93.09 Aligned_cols=147 Identities=14% Similarity=0.104 Sum_probs=108.4
Q ss_pred ceEEEeccCC---CCCCChhcHHHHHHHHHH-cCCceeeecCCCCC-HhhHHHHHhcCCcEEeecccccH----------
Q 025169 83 GVVGIDLSGN---PTKGEWTTFLPALKFARE-QGLQITLHCGEIPN-KEEIQSMLDFLPQRIGHACCFEE---------- 147 (257)
Q Consensus 83 ~vvg~~l~g~---~~~~~~~~~~~~~~~A~~-~gl~v~~Ha~E~~~-~~~i~~~l~lg~~ri~Hg~~l~~---------- 147 (257)
++.++..... ....+.+.++++++.|++ .|+++++|++++.. .+.+.++++.| +.+.|+....+
T Consensus 149 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~~~g-~~~~H~~~~~~~~~~~~s~~~ 227 (379)
T 2ics_A 149 FVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEKG-DVLTHCFNGKENGILDQATDK 227 (379)
T ss_dssp TEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCTT-CEEESTTCCSTTSSEETTTTE
T ss_pred cceEEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHhhcC-CeeeeccCCCccchhhccCHH
Confidence 4666554322 123566888999999999 99999999987643 34455555456 67888765433
Q ss_pred --HHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcC-CCEEecCCCCCC---C--CCChHHHHHHHHHhCCCC
Q 025169 148 --EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQ-HPLVLCTDDSGV---F--STSVSREYDLAASAFSLG 219 (257)
Q Consensus 148 --~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~G-v~v~lgTD~~~~---~--~~~l~~E~~~a~~~~~ls 219 (257)
++++.+++.|+.+++||.++.. +..++.++++.| +++++|||.+.. . ...+...+..+.. .++|
T Consensus 228 ~~~~~~~~~~~g~~~~~~p~~~~~-------~~~~~~~~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~~~-~~ls 299 (379)
T 2ics_A 228 IKDFAWQAYNKGVVFDIGHGTDSF-------NFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKLRV-VGYD 299 (379)
T ss_dssp ECHHHHHHHHTTCEEECCCTTTSC-------CHHHHHHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHHHH-HTCC
T ss_pred HHHHHHHHHHcCCEEEecCCCCCc-------CHHHHHHHHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHHHH-cCCC
Confidence 8888899999999999987643 335789999999 999999997522 1 1366666665544 4899
Q ss_pred HHHHHHH-HHHHHHHcCCCh
Q 025169 220 RREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 220 ~~~v~~~-~~n~~~~~~~~~ 238 (257)
.++++++ +.|+++..++++
T Consensus 300 ~~~~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 300 WPEIIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp HHHHHHTTTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 9999998 589999998864
No 40
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=98.99 E-value=2.9e-09 Score=96.93 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=100.0
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCC-HhhHHHHHhcCCcEEeecccccH-----------HHHHHHhcCCCcEEe
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPN-KEEIQSMLDFLPQRIGHACCFEE-----------EEWRKLKSSKIPVEI 162 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~-~~~i~~~l~lg~~ri~Hg~~l~~-----------~~~~~l~~~~i~v~~ 162 (257)
.++.+.+.++++.|++.|+++++|++++.. .+.+..++..| +.+.|+++..+ +++..++++|+.+.+
T Consensus 185 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l~~g-~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~ 263 (417)
T 2ogj_A 185 SWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEILGPG-DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDI 263 (417)
T ss_dssp TCTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHCCTT-CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEEC
T ss_pred cccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHhcCC-CEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEe
Confidence 456778889999999999999999987543 23333444445 78999987433 578888899999888
Q ss_pred cccccceeccccCCCcccHHHHHhcC-CCEEecCCCCCCC---C--CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcC
Q 025169 163 CLTSNIRTETISSLDIHHFVDLYKAQ-HPLVLCTDDSGVF---S--TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIF 235 (257)
Q Consensus 163 cP~SN~~l~~~~~~~~~pi~~l~~~G-v~v~lgTD~~~~~---~--~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~ 235 (257)
||.+.. ++..|+..++++| +++++|||.+ .. + ..+...+..+.. .++++.+++++ +.|+++..+
T Consensus 264 ~~~~~~-------~~~~~~~~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~~~-~~l~~~~al~~~T~n~A~~lg 334 (417)
T 2ogj_A 264 GHGGAS-------FSFKVAEAAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKLLS-VDMPFENVVEAVTRNPASVIR 334 (417)
T ss_dssp CBCSSS-------CCHHHHHHHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHHHH-TTCCHHHHHHTTTHHHHHHTT
T ss_pred cCCCcc-------ccchHHHHHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhC
Confidence 886432 2456899999999 9999999976 33 1 266666666554 68999999998 589999999
Q ss_pred CCh
Q 025169 236 ANG 238 (257)
Q Consensus 236 ~~~ 238 (257)
+++
T Consensus 335 l~~ 337 (417)
T 2ogj_A 335 LDM 337 (417)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 41
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=98.80 E-value=1.1e-08 Score=92.33 Aligned_cols=132 Identities=6% Similarity=-0.043 Sum_probs=96.9
Q ss_pred HHHHHHHHcCCceee-ecCCCCCHhhHHHHHhcCCc--------------------------------EEeecccccHHH
Q 025169 103 PALKFAREQGLQITL-HCGEIPNKEEIQSMLDFLPQ--------------------------------RIGHACCFEEEE 149 (257)
Q Consensus 103 ~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~lg~~--------------------------------ri~Hg~~l~~~~ 149 (257)
++.+.|+++|+++++ |+.|+ ...+..+++.|++ .+.||+++++++
T Consensus 186 ~~~~~a~~~g~~v~~gH~~~~--~~~~~~a~~~G~~~i~H~~~~~~~~~~~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~ 263 (396)
T 2vhl_A 186 ELIRHLKDESIIASMGHTDAD--SALLSDAAKAGASHMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLA 263 (396)
T ss_dssp HHHHHHHHTTCEEEECSBCCC--HHHHHHHHHTTCCEESSTTSSBCCCCSSSCHHHHHHHHCTTCEEEEECSSSSSCHHH
T ss_pred HHHHHHHHCCCEEeecccCCC--HHHHHHHHHcCCCEeEeCCccCcccccCCCCchhhhhcCCCcEEEEcCCccccCHHH
Confidence 667889999999999 99876 4555556655432 456788889999
Q ss_pred HHHHhcC-CC-cEEecccccceecccc-CCCcccHHHHHhcCCCEEecCCCCCCCC-CChHHHHHHHHHhCCCCHHHHHH
Q 025169 150 WRKLKSS-KI-PVEICLTSNIRTETIS-SLDIHHFVDLYKAQHPLVLCTDDSGVFS-TSVSREYDLAASAFSLGRREMFQ 225 (257)
Q Consensus 150 ~~~l~~~-~i-~v~~cP~SN~~l~~~~-~~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~E~~~a~~~~~ls~~~v~~ 225 (257)
++.+++. +. .+.+||.++...+..+ .+...|+..+.+.| ++.+ ||+...+. .+|..||+.+.+..++++.++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g-~~~~-~d~~~~g~~~~l~~~l~~~~~~~~~~~~~~l~ 341 (396)
T 2vhl_A 264 AKLAFLAKGSSKLILITDSMRAKGLKDGVYEFGGQSVTVRGR-TALL-SDGTLAGSILKMNEGARHMREFTNCSWTDIAN 341 (396)
T ss_dssp HHHHHHHHCTTSEEEECCBCTTTTSCSEEEEETTEEEEEETT-EEEC-TTSCBCSBCCCHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHhhcCCccEEEECcChhhcCCCCceEEECCeEEEEECC-EEEe-CCCcccccccCHHHHHHHHHHhcCCCHHHHHH
Confidence 9988887 76 5899999865322111 01123556677889 7888 87644433 69999999888766999999999
Q ss_pred H-HHHHHHHcCCCh
Q 025169 226 L-AKSAVKFIFANG 238 (257)
Q Consensus 226 ~-~~n~~~~~~~~~ 238 (257)
+ +.|++++.++++
T Consensus 342 ~aT~~~A~~lgl~~ 355 (396)
T 2vhl_A 342 ITSENAAKQLGIFD 355 (396)
T ss_dssp HHTHHHHHHHTCTT
T ss_pred HHHHHHHHHhCCcC
Confidence 8 489999998864
No 42
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=98.75 E-value=1.1e-08 Score=92.90 Aligned_cols=153 Identities=15% Similarity=0.131 Sum_probs=94.6
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh-------------------------hHH----HHHh-
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE-------------------------EIQ----SMLD- 133 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~-------------------------~i~----~~l~- 133 (257)
++++...+ ....+.+.+.++++.|+++|+++++|+.+..... .+. .+..
T Consensus 141 ~~~i~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~ 219 (426)
T 2z00_A 141 AVLLTDDG-RTNEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYA 219 (426)
T ss_dssp CCEEECTT-SCCCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCC-cCCCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCccchhcccccCChHHHHHHHHHHHHHHhhc
Confidence 45554322 3356789999999999999999999997642110 111 1112
Q ss_pred -----cCC-cEEeeccccc-HHHHHHHhcCCCcE--Eecccccceecc-ccCC-----Cccc---------HHHHHhcCC
Q 025169 134 -----FLP-QRIGHACCFE-EEEWRKLKSSKIPV--EICLTSNIRTET-ISSL-----DIHH---------FVDLYKAQH 189 (257)
Q Consensus 134 -----lg~-~ri~Hg~~l~-~~~~~~l~~~~i~v--~~cP~SN~~l~~-~~~~-----~~~p---------i~~l~~~Gv 189 (257)
.|. ..|.|+.... .+.++.++++|+.+ ++||.++..... .+.+ ...| +.++++.|+
T Consensus 220 ~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~ 299 (426)
T 2z00_A 220 LRRSPATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGT 299 (426)
T ss_dssp HHHCSSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTS
T ss_pred cccccCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 354 3688887543 46778888888665 569987654321 0000 1223 445666999
Q ss_pred CEEecCCC-CCCC------------C---CC--hHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCC
Q 025169 190 PLVLCTDD-SGVF------------S---TS--VSREYDLAASAFSLGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 190 ~v~lgTD~-~~~~------------~---~~--l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~ 237 (257)
++++|||. |... + .. +...+.......++|.++++++ +.|+++..+++
T Consensus 300 ~~~lgsD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~ 366 (426)
T 2z00_A 300 LDAIATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP 366 (426)
T ss_dssp SCEECCCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC
T ss_pred cEEEecCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC
Confidence 99999996 4321 1 01 1111222223346999999998 58999999874
No 43
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=98.72 E-value=3.2e-09 Score=98.06 Aligned_cols=128 Identities=12% Similarity=0.148 Sum_probs=90.0
Q ss_pred hhcHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHh---cC--C---cEEeecccccHHHHHHHhcCCCcEEecccccc
Q 025169 98 WTTFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLD---FL--P---QRIGHACCFEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~---lg--~---~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
.+.++++++.|++.|+++++ |++ + ...+..+.+ ++ + +...|++++++++++. .|+.+.+||. +
T Consensus 221 ~~~l~~~~~la~~~g~~v~i~H~~-~--~~~~~~~~~~~a~~~~~v~~~~~~h~~~l~~~~~~~---~g~~~~~~P~--l 292 (452)
T 2gwn_A 221 YRSSAEAVELAERMNARLHILHLS-T--EKELSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGR---LGNRIKWNPA--I 292 (452)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCC-C--TGGGGGSCCSSCGGGCSEEEEEEHHHHHCCGGGHHH---HGGGGCCSSC--C
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCC-C--HHHHHHHHHhhcccCCCeEEEEchHHhhcCHHHHhc---cCceEEECCC--C
Confidence 45678889999999999999 997 3 222222222 12 1 2234999999988876 6788889998 4
Q ss_pred eeccccCCCcccHHHHHhcCCCEEecCCCCCCCC----CChHH--------HHHH-----HHHhCCCCHHHHHHH-HHHH
Q 025169 169 RTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFS----TSVSR--------EYDL-----AASAFSLGRREMFQL-AKSA 230 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~----~~l~~--------E~~~-----a~~~~~ls~~~v~~~-~~n~ 230 (257)
+++. +..|+.+++++|+++++|||.++.+. .++++ |+++ .....+++..+++++ +.|+
T Consensus 293 r~~~----~~~~l~~~l~~Gv~~~lgTD~~~~~~~~k~~~~~~~~~g~~~~e~~~~~~~~~~~~~~ls~~~~l~~~T~~~ 368 (452)
T 2gwn_A 293 KKES----DREALRAAVRNGRIDIIATDHAPHLLREKEGSCLQAASGGPLVQHSLLALLELCNQGIFSIEEIVSKTAHIP 368 (452)
T ss_dssp CCHH----HHHHHHHHHHHSSSCEEECCBCCCCHHHHCSCTTTSCCCCCCTTTHHHHHHHHHHTTSSCHHHHHHHHTHHH
T ss_pred CCHH----HHHHHHHHHHCCCceEEEeCCCCCChHHhcCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHhH
Confidence 4433 45689999999999999999864432 23333 3222 222358999999998 5899
Q ss_pred HHHcCCC
Q 025169 231 VKFIFAN 237 (257)
Q Consensus 231 ~~~~~~~ 237 (257)
++..+++
T Consensus 369 A~~lgl~ 375 (452)
T 2gwn_A 369 ATLFAIE 375 (452)
T ss_dssp HHHHTBT
T ss_pred HHHcCCC
Confidence 9999875
No 44
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=98.69 E-value=2.1e-08 Score=92.84 Aligned_cols=142 Identities=13% Similarity=0.094 Sum_probs=85.6
Q ss_pred CCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---------------h---------HHHHHhc-C-CcEEeeccccc-
Q 025169 94 TKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---------------E---------IQSMLDF-L-PQRIGHACCFE- 146 (257)
Q Consensus 94 ~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---------------~---------i~~~l~l-g-~~ri~Hg~~l~- 146 (257)
...+++.++++++.|+++|+++++|+.+..... . +...+.+ . .....|+.+++
T Consensus 201 ~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~hi~H~~~ 280 (467)
T 1xrt_A 201 PVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHVHIQHVST 280 (467)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC--------------------CHHHHHHHHHHHHHHHCCEEEESCCCS
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHhcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 356788999999999999999999997642110 0 0001110 0 11234565553
Q ss_pred H---HHHHHHhcCC--CcEEecccccc-------------eecc-cc-CCCcccHHHHHhcCCCEEecCCCCCCCCC--C
Q 025169 147 E---EEWRKLKSSK--IPVEICLTSNI-------------RTET-IS-SLDIHHFVDLYKAQHPLVLCTDDSGVFST--S 204 (257)
Q Consensus 147 ~---~~~~~l~~~~--i~v~~cP~SN~-------------~l~~-~~-~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~--~ 204 (257)
+ +.++.++++| +.+++||.... ++.. .. .-...++.++++.|+++++|||.+..+.. +
T Consensus 281 ~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~~~ 360 (467)
T 1xrt_A 281 KLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKE 360 (467)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHHHHHHTCSCEECCCBCCCCC----
T ss_pred HHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCCCCCChhHhc
Confidence 2 3455555899 56778996422 2211 00 01234678899999999999997644321 2
Q ss_pred hHH---------------HHHHHHHhCC-CCHHHHHHH-HHHHHHHcCCC
Q 025169 205 VSR---------------EYDLAASAFS-LGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 205 l~~---------------E~~~a~~~~~-ls~~~v~~~-~~n~~~~~~~~ 237 (257)
++. .+. +.. .| +++.+++++ +.|++++.+++
T Consensus 361 ~~~~~~~g~~g~e~~l~~~l~-~~~-~g~ls~~~al~~aT~n~A~~lgl~ 408 (467)
T 1xrt_A 361 LVEFAMPGIIGLQTALPSALE-LYR-KGIISLKKLIEMFTINPARIIGVD 408 (467)
T ss_dssp -------CCCCGGGHHHHHHH-HHH-TTSSCHHHHHHHHTHHHHHHHTCS
T ss_pred ccccCCCCCccHHHHHHHHHH-HHH-cCCCCHHHHHHHhccCHHHHhCCC
Confidence 222 222 333 55 999999998 58999999874
No 45
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=98.67 E-value=2.5e-08 Score=90.13 Aligned_cols=128 Identities=9% Similarity=-0.034 Sum_probs=89.9
Q ss_pred HHHHHHHHcCCceee-ecCCCCCHhhHHHHHhcCC----------------------------c----EEeecccccHHH
Q 025169 103 PALKFAREQGLQITL-HCGEIPNKEEIQSMLDFLP----------------------------Q----RIGHACCFEEEE 149 (257)
Q Consensus 103 ~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~lg~----------------------------~----ri~Hg~~l~~~~ 149 (257)
++.+.|++.|+++++ |+.|+ .+.+.++++.|. + .+.||++++|++
T Consensus 172 ~~i~~A~~~g~~v~igH~~~~--~~~i~~a~~~G~~~itH~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~p~~ 249 (376)
T 1o12_A 172 ELLLRLVKRDIVLSAGHSIAT--FEEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREM 249 (376)
T ss_dssp GGGGGGGGGTCEEEECSBCCC--HHHHHHHHTTTCCEESSTTTTBCCCCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHH
T ss_pred HHHHHHHHCCCEEEeecCccC--HHHHHHHHHCCCCeEEecccCcCChhhcccchhhhhhcCCcceEEEeCCCcCcCHHH
Confidence 567889999999999 99876 455555554321 1 357888889999
Q ss_pred HHHHhcC-CCcEEecccccceeccccCCCcccHHHHHhcCCCEEe--c----CCCCCCC-CCChHHHHHHHHHhCCCCHH
Q 025169 150 WRKLKSS-KIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVL--C----TDDSGVF-STSVSREYDLAASAFSLGRR 221 (257)
Q Consensus 150 ~~~l~~~-~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~l--g----TD~~~~~-~~~l~~E~~~a~~~~~ls~~ 221 (257)
++++.+. +.. .+||.||..+.. +..|.. +...|+++.+ | +|+...+ ..+|..||+.++...++++.
T Consensus 250 ~~~~~~~~g~~-~~~~~sd~~~~~----g~~~g~-~~~~g~~~~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~~~~~~~ 323 (376)
T 1o12_A 250 VKLVYKVKKAN-GIVLVTDSISAA----GLKDGT-TTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSIT 323 (376)
T ss_dssp HHHHHHHHTGG-GEEEECCBCTTT----TSCSCE-EESSSSEEEEETTEEECTTSCBCCBCCCHHHHHHHHHHHHCCCHH
T ss_pred HHHHHhhCCCC-CEEEecCchhhc----CCCCee-EEECCeEEEEeCCeEEeCCCcccccccCHHHHHHHHHHHcCCCHH
Confidence 9998877 564 578888876443 222222 3344566666 3 4543333 36999999988876799999
Q ss_pred HHHHHH-HHHHHHcCCCh
Q 025169 222 EMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 222 ~v~~~~-~n~~~~~~~~~ 238 (257)
++++++ .|++++.++++
T Consensus 324 ~~l~~~T~~~A~~lgl~~ 341 (376)
T 1o12_A 324 ELAKVSSYNSCVELGLDD 341 (376)
T ss_dssp HHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999985 89999998864
No 46
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=98.66 E-value=6e-07 Score=82.20 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=88.7
Q ss_pred CCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHH----HHHhc-------------------------------CCcE
Q 025169 94 TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ----SMLDF-------------------------------LPQR 138 (257)
Q Consensus 94 ~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~----~~l~l-------------------------------g~~r 138 (257)
...+++.+.++++.|+++|+++++|+ |. ...+. .++.. |+.
T Consensus 158 ~~~~~~~l~~~~~~a~~~~~~v~~H~-e~--~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~- 233 (458)
T 1gkp_A 158 FGVDDGEMYQTLRLAKELGVIVTAHC-EN--AELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGAT- 233 (458)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEEE-SC--HHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCE-
T ss_pred cCCCHHHHHHHHHHHHhcCCEEEEEc-CC--HHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCC-
Confidence 45678899999999999999999999 54 22211 11112 222
Q ss_pred Eeeccccc----HHHHHHHhcCCCcE--Eeccc------ccceec----c----ccCCC----cccHHHHHhcCCCEEec
Q 025169 139 IGHACCFE----EEEWRKLKSSKIPV--EICLT------SNIRTE----T----ISSLD----IHHFVDLYKAQHPLVLC 194 (257)
Q Consensus 139 i~Hg~~l~----~~~~~~l~~~~i~v--~~cP~------SN~~l~----~----~~~~~----~~pi~~l~~~Gv~v~lg 194 (257)
.|.++++ .+.++.++++|+.+ ++||. ||+.+. . .++++ ..++.++++.|+++++|
T Consensus 234 -~~~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~g 312 (458)
T 1gkp_A 234 -GYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVG 312 (458)
T ss_dssp -EEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEE
T ss_pred -EEEEeCCCHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEE
Confidence 1344442 34688889999876 78998 887541 0 01111 11255799999999999
Q ss_pred CCCCCCCC-------CChHH--------HHHH------HHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 195 TDDSGVFS-------TSVSR--------EYDL------AASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 195 TD~~~~~~-------~~l~~--------E~~~------a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
||..+.+. .++.. |+.+ +....++|+.+++++ +.|+++..++++
T Consensus 313 tD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~ 378 (458)
T 1gkp_A 313 TDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFP 378 (458)
T ss_dssp CCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHHhCCCC
Confidence 99754321 01111 2222 111124999999998 589999999854
No 47
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=98.64 E-value=2.5e-08 Score=91.52 Aligned_cols=135 Identities=11% Similarity=0.009 Sum_probs=94.4
Q ss_pred hhcHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhcCC----cEEeecccccHHHHHHHhcCCCcEEecccccceecc
Q 025169 98 WTTFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDFLP----QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTET 172 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~lg~----~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~ 172 (257)
.+.++++++.|++.|+++++ |+......+.+..+-+.|. +.+.|++++++++++.+++.+..+.+||.+.. ..
T Consensus 216 ~~~~~~~~~~a~~~g~~~~~~H~~~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~--~~ 293 (457)
T 1nfg_A 216 AEATARALALAEIVNAPIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARA--KK 293 (457)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCC--HH
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCCcHHHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccccCceeEEcCCCCC--HH
Confidence 35677888999999999998 9852100122333223453 45789999999999888888888899998643 22
Q ss_pred ccCCCcccHHHHHhcCCCEEecCCCCCCCC--------CChHH--------HHH-----HHHHhCCCCHHHHHHH-HHHH
Q 025169 173 ISSLDIHHFVDLYKAQHPLVLCTDDSGVFS--------TSVSR--------EYD-----LAASAFSLGRREMFQL-AKSA 230 (257)
Q Consensus 173 ~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~--------~~l~~--------E~~-----~a~~~~~ls~~~v~~~-~~n~ 230 (257)
...++.++++.|+++++|||....+. .++.+ |+. ......+++..+++++ +.|+
T Consensus 294 ----~~~~~~~~~~~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~~~~~~l~~~~~l~~~T~~~ 369 (457)
T 1nfg_A 294 ----DHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRISLTQFVELVATRP 369 (457)
T ss_dssp ----HHHHHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHHHHTTSSCHHHHHHHHTHHH
T ss_pred ----HHHHHHHHHhCCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHhhhH
Confidence 34688999999999999999754331 12221 221 2223346999999998 5899
Q ss_pred HHHcCCCh
Q 025169 231 VKFIFANG 238 (257)
Q Consensus 231 ~~~~~~~~ 238 (257)
++..++++
T Consensus 370 A~~lgl~~ 377 (457)
T 1nfg_A 370 AKVFGMFP 377 (457)
T ss_dssp HHHTTCTT
T ss_pred HHHhCCCC
Confidence 99999864
No 48
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=98.58 E-value=5.5e-07 Score=82.34 Aligned_cols=142 Identities=10% Similarity=-0.049 Sum_probs=87.7
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCCCHhhH----------------------------HHHHh----cCCcEEeec
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEI----------------------------QSMLD----FLPQRIGHA 142 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i----------------------------~~~l~----lg~~ri~Hg 142 (257)
..+++.++++++.|+++|+++++|+.+....... .+++. .|. -.|.
T Consensus 160 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~g~--~~h~ 237 (458)
T 1gkr_A 160 AVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGC--RLIV 237 (458)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCC--EEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHhCC--CEEE
Confidence 4578899999999999999999998532110111 01111 122 2466
Q ss_pred cccc-HHHHHHHhc---CC--CcEEeccccccee-----------ccccCC----CcccHHHHHhcCCCEEecCCCCCCC
Q 025169 143 CCFE-EEEWRKLKS---SK--IPVEICLTSNIRT-----------ETISSL----DIHHFVDLYKAQHPLVLCTDDSGVF 201 (257)
Q Consensus 143 ~~l~-~~~~~~l~~---~~--i~v~~cP~SN~~l-----------~~~~~~----~~~pi~~l~~~Gv~v~lgTD~~~~~ 201 (257)
++++ ..+++.+++ .| +.+++||..+... ...+.+ ...++.++++.|+++++|||..+..
T Consensus 238 ~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD~~~~~ 317 (458)
T 1gkr_A 238 LHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHP 317 (458)
T ss_dssp CCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECCC
T ss_pred EeCCCHHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeCCCCCC
Confidence 6664 355666654 77 6678899743210 111111 1336788999999999999974432
Q ss_pred C-------CChHH--------H------HHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 202 S-------TSVSR--------E------YDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 202 ~-------~~l~~--------E------~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
. .+++. | +.......++|..+++++ +.|+++..++++
T Consensus 318 ~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~ 376 (458)
T 1gkr_A 318 VEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYP 376 (458)
T ss_dssp GGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred hHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCCC
Confidence 1 23332 2 221222237999999998 589999999864
No 49
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=98.54 E-value=2.5e-07 Score=88.25 Aligned_cols=193 Identities=9% Similarity=0.024 Sum_probs=113.0
Q ss_pred hhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCcee
Q 025169 37 TKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQIT 116 (257)
Q Consensus 37 ~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~ 116 (257)
++.++...++.++.+++..+...... ..+++..+.+ + .+.+++.+.. .+..+++.+.++++.|+++|++++
T Consensus 176 ~~~l~~~~~a~~~~~~~~~~~g~g~~-~~~~~l~e~~----~---~Ga~gik~~~-~~~~t~e~l~~~l~~A~~~g~~V~ 246 (569)
T 1e9y_B 176 RRNLKWMLRAAEEYSMNLGFLAKGNA-SNDASLADQI----E---AGAIGFKIHE-DWGTTPSAINHALDVADKYDVQVA 246 (569)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEEECCC-SCHHHHHHHH----H---TTCSEEEECG-GGCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhcccCceEEEECCCCc-CCHHHHHHHH----H---cCCCEEEecC-CCCCCHHHHHHHHHHHHHhCCEEE
Confidence 45566677777788888655422111 2344333222 2 2345665543 335688999999999999999999
Q ss_pred eecCCCCCHhhHHHHH--hcCC-cEEeeccccc----HHHHHHHhcCCC-cEEecccccceec--------------ccc
Q 025169 117 LHCGEIPNKEEIQSML--DFLP-QRIGHACCFE----EEEWRKLKSSKI-PVEICLTSNIRTE--------------TIS 174 (257)
Q Consensus 117 ~Ha~E~~~~~~i~~~l--~lg~-~ri~Hg~~l~----~~~~~~l~~~~i-~v~~cP~SN~~l~--------------~~~ 174 (257)
+|+.+......+.+.+ ..|. ..+.|..... ++++++++++|+ +.+.+|+..+... ..+
T Consensus 247 iHa~~~~e~g~~~~~la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~~~~~ptl~~t~~~~~~~~d~~~v~h~l~~ 326 (569)
T 1e9y_B 247 IHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDK 326 (569)
T ss_dssp ECCCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCS
T ss_pred EEcCCcccchHHHHHHHHHcCCCEEEEEcccCcccccHHHHHHHHHcCCeeEeeCCccccccchhhhhhchhhhhhhcCc
Confidence 9997532211222222 2453 3455555443 789999999997 3344555321100 000
Q ss_pred C-----------C---CcccHHHHHhcCCCEEecCCCCCCCCC-----ChH---HHHHHHHH--------hCCCCHHHHH
Q 025169 175 S-----------L---DIHHFVDLYKAQHPLVLCTDDSGVFST-----SVS---REYDLAAS--------AFSLGRREMF 224 (257)
Q Consensus 175 ~-----------~---~~~pi~~l~~~Gv~v~lgTD~~~~~~~-----~l~---~E~~~a~~--------~~~ls~~~v~ 224 (257)
+ . ...+...|.++|+++++|||.+..... +++ .++..... ..+++..+++
T Consensus 327 ~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~~~~~~~~~~~~G~l~~~~~~~~~ls~~~al 406 (569)
T 1e9y_B 327 SIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYL 406 (569)
T ss_dssp SCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHHHHHHHHHHHHCSCSSCCSSSCHHHHHHHH
T ss_pred ccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCcccccccchhhHHHHhHhhccCcchhhccccCCCHHHHH
Confidence 0 0 122345567799999999998765421 122 34432210 1246788888
Q ss_pred HH-HHHHHHHcCCCh
Q 025169 225 QL-AKSAVKFIFANG 238 (257)
Q Consensus 225 ~~-~~n~~~~~~~~~ 238 (257)
++ +.|++++.++++
T Consensus 407 ~~~T~npA~~lGl~~ 421 (569)
T 1e9y_B 407 SKYTINPAIAHGISE 421 (569)
T ss_dssp GGGTHHHHHHTTCTT
T ss_pred HHHhHHHHHHcCCCC
Confidence 87 689999999864
No 50
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.44 E-value=4.4e-06 Score=71.05 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=95.2
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cC-C--cEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL-P--QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg-~--~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
+.|.+.++.|+++|+|+.+|+++. ...+.+.++ .+ + ..+.|+..-+.+.++.+.+.|+.+.+++..+..
T Consensus 111 ~~~~~~~~~a~~~~~pv~iH~~~~--~~~~~~~l~~~~~p~~~~v~H~~~~~~~~~~~~~~~g~~~~~sg~~~~~----- 183 (265)
T 1yix_A 111 ESFIHHIQIGRELNKPVIVHTRDA--RADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFR----- 183 (265)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHHTTGGGTCEEETTCCSCHHHHHHHHTTTCEEEECGGGGST-----
T ss_pred HHHHHHHHHHHHhCCCEEEEecCc--hHHHHHHHHhcCCCCCCEEEEcCCCCHHHHHHHHHCCcEEEECCccccC-----
Confidence 458889999999999999999854 445555554 33 2 456799888888889998899999888743321
Q ss_pred CCCcccHHHHHhc-C-CCEEecCCCCCCCC----------CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCChH
Q 025169 175 SLDIHHFVDLYKA-Q-HPLVLCTDDSGVFS----------TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANGR 239 (257)
Q Consensus 175 ~~~~~pi~~l~~~-G-v~v~lgTD~~~~~~----------~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~~ 239 (257)
....+.++++. | -++.+|||.|-... ..+...+..+++..+++.+++.++ ..|+.+...++.+
T Consensus 184 --~~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~~~~~~~i~~~Na~rl~~l~~~ 259 (265)
T 1yix_A 184 --NAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDAS 259 (265)
T ss_dssp --TCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTTCCGG
T ss_pred --chHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCcChh
Confidence 11246677775 4 47999999875421 235556666666579999999997 4799998888664
No 51
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=98.30 E-value=6.9e-06 Score=78.02 Aligned_cols=144 Identities=8% Similarity=-0.021 Sum_probs=87.0
Q ss_pred CCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhH-HHHHhcCC-----------------------------cEEeecc
Q 025169 94 TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEI-QSMLDFLP-----------------------------QRIGHAC 143 (257)
Q Consensus 94 ~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i-~~~l~lg~-----------------------------~ri~Hg~ 143 (257)
..++.+.++++++.|+++|+++++|+.+....... ..++..|. ..-.|.+
T Consensus 174 ~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~la~~~g~~vhi~ 253 (559)
T 2fty_A 174 LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFV 253 (559)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 46688999999999999999999999532110100 01111110 1125666
Q ss_pred ccc-HHHHHHH---hcCCCcE--Eecccccceec------------------------------------------cccC
Q 025169 144 CFE-EEEWRKL---KSSKIPV--EICLTSNIRTE------------------------------------------TISS 175 (257)
Q Consensus 144 ~l~-~~~~~~l---~~~~i~v--~~cP~SN~~l~------------------------------------------~~~~ 175 (257)
+++ ++.++++ +++|+.| ++||. ++.+. ..|+
T Consensus 254 H~s~~~~~~~i~~ak~~G~~Vt~e~~p~-~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~Pp 332 (559)
T 2fty_A 254 HVSSPQAAEVIKQAQTKGLKVYAETCPQ-YALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPP 332 (559)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEEEECHH-HHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSC
T ss_pred cCCCHHHHHHHHHHHHcCCceEEeecCc-ccccCHHHhhccccccccccccccCccccccccccccCccccccCcEECCC
Confidence 663 3335554 4678766 88997 22221 0011
Q ss_pred C----CcccHHHHHhcCCCEEecCCCCCCCCC--------------------ChHH--------HHHHH------HHhCC
Q 025169 176 L----DIHHFVDLYKAQHPLVLCTDDSGVFST--------------------SVSR--------EYDLA------ASAFS 217 (257)
Q Consensus 176 ~----~~~pi~~l~~~Gv~v~lgTD~~~~~~~--------------------~l~~--------E~~~a------~~~~~ 217 (257)
+ ...++.++++.|+.++||||.++.+.. ++.+ |+++. .....
T Consensus 333 lR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l~~ll~~~v~~~~ 412 (559)
T 2fty_A 333 IRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGN 412 (559)
T ss_dssp CCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTS
T ss_pred CCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHHHHHHHHHHHcCC
Confidence 1 112478899999999999997543321 2222 32222 12235
Q ss_pred C-CHHHHHHH-HHHHHHHcCCCh
Q 025169 218 L-GRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 218 l-s~~~v~~~-~~n~~~~~~~~~ 238 (257)
+ +..+++++ +.|+++..++.+
T Consensus 413 l~~~~~~~~~~t~~~A~~lgl~~ 435 (559)
T 2fty_A 413 LTSMMKLVEIQCTNPAKVYGMYP 435 (559)
T ss_dssp SSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCCHHHHHHHHhHHHHHHhCCCC
Confidence 8 99999998 589999999843
No 52
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.26 E-value=6.3e-05 Score=63.75 Aligned_cols=129 Identities=13% Similarity=0.094 Sum_probs=90.7
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cC--CcEEeecccccHHHHHHHhcCCCcEEecccccceeccccC
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL--PQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISS 175 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg--~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~ 175 (257)
+.|++.++.|++.|+|+.+|++.. ...+.+.++ .+ ...+-||..-+.+.++.+.+.|+.+.+++.....
T Consensus 114 ~~f~~~~~~a~~~~~Pv~iH~~~a--~~~~~~il~~~~~~~~~i~H~~~g~~~~~~~~~~~g~~i~~~g~~~~~------ 185 (259)
T 1zzm_A 114 WLLDEQLKLAKRYDLPVILHSRRT--HDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYP------ 185 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESC--HHHHHHHHHHHCCTTCEEETTCCSCHHHHHHHHHTTCEEEECGGGGCT------
T ss_pred HHHHHHHHHHHHhCCcEEEEeccc--HHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHCCCEEEECceeecc------
Confidence 468888999999999999999754 444545553 34 3567899776778888888899998877543211
Q ss_pred CCcccHHHHHhcC--CCEEecCCCCCCC--------C--CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCC
Q 025169 176 LDIHHFVDLYKAQ--HPLVLCTDDSGVF--------S--TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFA 236 (257)
Q Consensus 176 ~~~~pi~~l~~~G--v~v~lgTD~~~~~--------~--~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~ 236 (257)
....++++++.. -++.++||.|-.. + ..+...+..++...|++.+++.+++ .|+.+...+
T Consensus 186 -~~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~Na~rl~~l 258 (259)
T 1zzm_A 186 -RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNV 258 (259)
T ss_dssp -TTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHCC
T ss_pred -ccHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence 112366666642 4689999987432 1 2345566667677899999998874 798886654
No 53
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=98.25 E-value=9.5e-06 Score=77.86 Aligned_cols=181 Identities=14% Similarity=0.071 Sum_probs=116.7
Q ss_pred hhhhHhhcccCCCcEEEEEE-EeeCC----------CCHHHHHHHHHHHHhhCCCceEEEeccCCCC--CCChhcHHHHH
Q 025169 39 NMNDACNGTRGKKIYVRLLL-SIDRR----------ETTEAAMETVKLALEMRDLGVVGIDLSGNPT--KGEWTTFLPAL 105 (257)
Q Consensus 39 ~~~~~~~a~~~~gir~~li~-~~~r~----------~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~--~~~~~~~~~~~ 105 (257)
.++...+..++.+++..+.. ++... .+.++..+. . ...++++++-..+.. ....+.+.+.+
T Consensus 135 ~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l----~--~~~~v~glgE~~~~~~v~~~d~~l~~~l 208 (608)
T 3nqb_A 135 GVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADL----L--SWPEIGGIAEIMNMRGVIERDPRMSGIV 208 (608)
T ss_dssp HHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHH----H--TSTTEEEEEEECCHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHH----H--hccCcceeeEeeccCCcCCCcHHHHHHH
Confidence 34445566677788776654 22211 122222221 1 224577876433211 12446788899
Q ss_pred HHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHH
Q 025169 106 KFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLY 185 (257)
Q Consensus 106 ~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~ 185 (257)
+.|++.|+++..|+.+.. ...+...+..|... .|+...+++.++.++ .|..+.+. .|..+. ...+.+.+
T Consensus 209 ~~A~~~g~pV~~Ha~~~~-~~~L~~~~~aGv~~-~H~~~~~eea~e~l~-~G~~i~i~-gs~~~~-------~~~l~~~i 277 (608)
T 3nqb_A 209 QAGLAAEKLVCGHARGLK-NADLNAFMAAGVSS-DHELVSGEDLMAKLR-AGLTIELR-GSHDHL-------LPEFVAAL 277 (608)
T ss_dssp HHHHHHTCEEEECCTTCC-HHHHHHHHHTTCCE-ECCCCSHHHHHHHHH-TTCEEEEE-SSSGGG-------HHHHHHHH
T ss_pred HHHHHcCCEEEEcCCCCC-HHHHHHHHHcCCCe-eeccCCHHHHHHHHH-CCCEEEEe-cccccc-------HHHHHHHH
Confidence 999999999999987542 33455555677765 899988888888876 68887765 332211 11233333
Q ss_pred ----hcCCCEEecCCCCCCC----CCChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCC
Q 025169 186 ----KAQHPLVLCTDDSGVF----STSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFAN 237 (257)
Q Consensus 186 ----~~Gv~v~lgTD~~~~~----~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~ 237 (257)
..|+++++|||+.... ..++..+++.+.. .|+++.++++++ .|++++.+++
T Consensus 278 ~~~~~~g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~~-~Gls~~eal~~aT~n~A~~lgl~ 337 (608)
T 3nqb_A 278 NTLGHLPQTVTLCTDDVFPDDLLQGGGLDDVVRRLVR-YGLKPEWALRAATLNAAQRLGRS 337 (608)
T ss_dssp HHHTSCCTTEEEECBSCCHHHHHHTCSHHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHTCT
T ss_pred HhHhhcCceEEEecCCCCCcchhhhcchHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCCC
Confidence 3899999999974322 2467778888876 599999999985 8999999874
No 54
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=98.23 E-value=2.7e-06 Score=80.87 Aligned_cols=193 Identities=15% Similarity=0.103 Sum_probs=112.4
Q ss_pred hhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCcee
Q 025169 37 TKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQIT 116 (257)
Q Consensus 37 ~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~ 116 (257)
.+.++...+++++.++...+...... ...++..+.++ .+++||.+..+ +..+++.+.++++.|++.|+++.
T Consensus 177 ~~~l~~~l~aa~~~~v~~~~~g~~~~-~~l~el~el~~-------aGa~gfK~~~~-~~~~~~~L~~aL~~A~~~g~~V~ 247 (570)
T 4ac7_C 177 PWNIEKMLKSTEGLPINVGILGKGHG-SSIAPIMEQID-------AGAAGLKIHED-WGATPASIDRSLTVADEADVQVA 247 (570)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEECCC-SSHHHHHHHHH-------HTCCEEEEEGG-GCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhhhCCeeEEEEeccCC-cCHHHHHHHHH-------cCCCeEeeccC-CCCCHHHHHHHHHHHHHcCCEEE
Confidence 34556566666777887766554332 23333222221 24667765432 24578899999999999999999
Q ss_pred eecCCCCCHhhHHHHHhcCCcEEeecccc-------cHHHHHHHhcCCCcEEe-cccccceecc----------------
Q 025169 117 LHCGEIPNKEEIQSMLDFLPQRIGHACCF-------EEEEWRKLKSSKIPVEI-CLTSNIRTET---------------- 172 (257)
Q Consensus 117 ~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l-------~~~~~~~l~~~~i~v~~-cP~SN~~l~~---------------- 172 (257)
+|+........+.++++....+..|..+. .|+.++.+.+.++.... .|+.......
T Consensus 248 iHae~l~e~g~Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~ 327 (570)
T 4ac7_C 248 IHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQ 327 (570)
T ss_dssp EECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCGGGSSCBTTHHHHHHHHHHHHTTCCT
T ss_pred EEcCCcchhhHHHHHHHHhCCCcceeEeeeccccccChHHHHHhccCCccccccCCCCCcccchhHHhhhheeeecccCc
Confidence 99874322222344444212233333332 27788888777765332 3432111000
Q ss_pred -cc-C-------C---CcccHHHHHhcCCCEEecCCCCCCCC--CChHHHHHHHHHh--------------CCCCHHHHH
Q 025169 173 -IS-S-------L---DIHHFVDLYKAQHPLVLCTDDSGVFS--TSVSREYDLAASA--------------FSLGRREMF 224 (257)
Q Consensus 173 -~~-~-------~---~~~pi~~l~~~Gv~v~lgTD~~~~~~--~~l~~E~~~a~~~--------------~~ls~~~v~ 224 (257)
.+ + + ...|.+.|++.|+.+++|||.|.+.. ..+..-+..+.+. .+++..+.+
T Consensus 328 ~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~~~~a~~~~~~rg~l~~~~~~~~~~~~~eal 407 (570)
T 4ac7_C 328 NIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYV 407 (570)
T ss_dssp TCHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHHHHHHHHHHHHHCSCTTCCTTCCHHHHHHHH
T ss_pred cccchhHHHHhhhhhhhcccccchhhcCCEEEEECcccccCCcCcccCcHHHHHHHHHHhcCCCCCccccccCCCHHHHH
Confidence 00 0 0 24577889999999999999987653 2233333332211 124567888
Q ss_pred HH-HHHHHHHcCCCh
Q 025169 225 QL-AKSAVKFIFANG 238 (257)
Q Consensus 225 ~~-~~n~~~~~~~~~ 238 (257)
++ +.|+++++++++
T Consensus 408 ~~~T~~~A~~lg~~~ 422 (570)
T 4ac7_C 408 SKYTINPAIAQGIAH 422 (570)
T ss_dssp HHHTHHHHHHHTCTT
T ss_pred HHHhHHHHHHhCCCC
Confidence 87 589999999875
No 55
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=98.21 E-value=3.2e-06 Score=73.17 Aligned_cols=134 Identities=13% Similarity=0.103 Sum_probs=93.3
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEe--------------
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEI-------------- 162 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~-------------- 162 (257)
..+.+.++++.|++.|.++++|... ...+...+..+.+.+.+.....................
T Consensus 205 ~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (403)
T 3mtw_A 205 TYEEMKAVVDEAHMAGIKVAAHAHG---ASGIREAVRAGVDTIEHASLVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKK 281 (403)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecc---chhHHHHHHhcccccccccccccchhhhhccccceeeeeeccchhhhhhhhc
Confidence 4577888999999999999999853 34445555567666665554444333333333322222
Q ss_pred -------cccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHc
Q 025169 163 -------CLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFI 234 (257)
Q Consensus 163 -------cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~ 234 (257)
++.++..... ...+++.+++.|+++++|||.+.....++..++..+.+ .|+|+.+++++ |.|++++.
T Consensus 282 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~gt~~~~~~~~~~~~~~~~~~~-~gls~~eal~~~T~npA~~l 356 (403)
T 3mtw_A 282 NGVLEDNLRKDRDIGEL----QRENFRKALKAGVKMVYGTDAGIYPHGDNAKQFAVMVR-YGATPLQAIQSATLTAAEAL 356 (403)
T ss_dssp HTCCHHHHHHHHHHHHH----HHHHHHHHHHHTCEEECCCCBTTBCTTCGGGHHHHHHH-TTCCHHHHHHHTTHHHHHHH
T ss_pred cccchhhcccccccccc----ccchhhHHHhcCCeEeeccCCcccccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHh
Confidence 2222111111 23467889999999999999887777788899888876 79999999998 58999999
Q ss_pred CCCh
Q 025169 235 FANG 238 (257)
Q Consensus 235 ~~~~ 238 (257)
++++
T Consensus 357 gl~~ 360 (403)
T 3mtw_A 357 GRSK 360 (403)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 9876
No 56
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=98.21 E-value=2.7e-06 Score=80.87 Aligned_cols=193 Identities=15% Similarity=0.105 Sum_probs=112.6
Q ss_pred hhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCcee
Q 025169 37 TKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQIT 116 (257)
Q Consensus 37 ~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~ 116 (257)
.+.++...+++++.++...+...... ...++..+.++ .+++||.+..+ +..+++.+.++++.|++.|+++.
T Consensus 177 ~~~l~~~l~aa~~~~v~~~~~g~~~~-~~l~el~el~~-------aGa~gfK~~~~-~~~~~~~L~~aL~~A~~~g~~V~ 247 (570)
T 4ubp_C 177 PWNIEKMLKSTEGLPINVGILGKGHG-SSIAPIMEQID-------AGAAGLKIHED-WGATPASIDRSLTVADEADVQVA 247 (570)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEECCC-SSHHHHHHHHH-------HTCCEEEEEGG-GCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhhhCCeeEEEEeccCC-cCHHHHHHHHH-------cCCCeEeeccC-CCCCHHHHHHHHHHHHHcCCEEE
Confidence 34556566666777887766554332 23333222221 24667765432 24578899999999999999999
Q ss_pred eecCCCCCHhhHHHHHhcCCcEEeecccc-------cHHHHHHHhcCCCcEEe-cccccceecc----------------
Q 025169 117 LHCGEIPNKEEIQSMLDFLPQRIGHACCF-------EEEEWRKLKSSKIPVEI-CLTSNIRTET---------------- 172 (257)
Q Consensus 117 ~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l-------~~~~~~~l~~~~i~v~~-cP~SN~~l~~---------------- 172 (257)
+|+........+.++++....+..|..+. .|+.++.+.+.++.... .|+.......
T Consensus 248 iHae~l~e~g~Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~ 327 (570)
T 4ubp_C 248 IHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQ 327 (570)
T ss_dssp EECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCT
T ss_pred EEcCCcchhhHHHHHHHHhCCCceeEEEecccccccChHHHHHhccCCccccccCCCCCcccchhHHhhhheeeecccCc
Confidence 99874322222344444212233333332 27788888777765332 3432111000
Q ss_pred -cc-C-------C---CcccHHHHHhcCCCEEecCCCCCCCC--CChHHHHHHHHHh---C-----------CCCHHHHH
Q 025169 173 -IS-S-------L---DIHHFVDLYKAQHPLVLCTDDSGVFS--TSVSREYDLAASA---F-----------SLGRREMF 224 (257)
Q Consensus 173 -~~-~-------~---~~~pi~~l~~~Gv~v~lgTD~~~~~~--~~l~~E~~~a~~~---~-----------~ls~~~v~ 224 (257)
.+ + + ...|.+.|++.|+.+++|||.|.+.. ..+..-+..+.+. . +++..+.+
T Consensus 328 ~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~~~~a~~~~~~rg~l~~~~~~~~~~~~~eal 407 (570)
T 4ubp_C 328 NIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYV 407 (570)
T ss_dssp TSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHHH
T ss_pred cccchhHHHHhhhhhhccccccchhhcCCEEEEECcccccCCcCcccCcHHHHHHHHHHhcCCCCCccccccCCCHHHHH
Confidence 00 0 0 24577889999999999999987653 2233333332211 1 24567888
Q ss_pred HH-HHHHHHHcCCCh
Q 025169 225 QL-AKSAVKFIFANG 238 (257)
Q Consensus 225 ~~-~~n~~~~~~~~~ 238 (257)
++ +.|+++++++++
T Consensus 408 ~~~T~~~A~~lg~~~ 422 (570)
T 4ubp_C 408 SKYTINPAIAQGIAH 422 (570)
T ss_dssp HTTTHHHHHHHTCTT
T ss_pred HHHhHHHHHHhCCCC
Confidence 87 689999999875
No 57
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=98.20 E-value=4.2e-05 Score=70.53 Aligned_cols=200 Identities=10% Similarity=0.035 Sum_probs=107.5
Q ss_pred CchhhhhhHhhc-ccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEec--cCC-CCCCChhcHHHHHHHHHH
Q 025169 35 VNTKNMNDACNG-TRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDL--SGN-PTKGEWTTFLPALKFARE 110 (257)
Q Consensus 35 ~~~~~~~~~~~a-~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l--~g~-~~~~~~~~~~~~~~~A~~ 110 (257)
+..+.++...+. .....+...+..++.. ...+...+..++..+ .++.++.+ ... ....+.+.+.++++.|++
T Consensus 100 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~---~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~ 175 (461)
T 3sfw_A 100 SLHSAIATWHEKARGKAVIDYGFHLMVSD-ANDHVLEELESVVNN---EGITSLKVFMAYKNVLMADDETLFKTLIRAKE 175 (461)
T ss_dssp CHHHHHHHHHHHHTTTCSSEEEEEEECSC-CCHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhcCcEEEEEEEEEEeC-CCHHHHHHHHHHHHh---CCCCEEEEEEecCCCcccCHHHHHHHHHHHHh
Confidence 344555554433 2334455544444432 334433333333321 23444433 221 134577899999999999
Q ss_pred cCCceeeecCCCCC----------------------------HhhHHHHHhc--CCcEEeecccccH----HHHHHHhcC
Q 025169 111 QGLQITLHCGEIPN----------------------------KEEIQSMLDF--LPQRIGHACCFEE----EEWRKLKSS 156 (257)
Q Consensus 111 ~gl~v~~Ha~E~~~----------------------------~~~i~~~l~l--g~~ri~Hg~~l~~----~~~~~l~~~ 156 (257)
+|+++.+|+..... ...+..++.+ ....-.|.++++. +.++.++++
T Consensus 176 ~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~s~~~~l~~i~~ak~~ 255 (461)
T 3sfw_A 176 LGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHVSCADAVRRIAEAREK 255 (461)
T ss_dssp HTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSCCSHHHHHHHHHHHHT
T ss_pred cCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcHHHHHHHHHHHhc
Confidence 99999999642110 0011122221 0112247777643 567778888
Q ss_pred CCcE--Eeccccccee--------------ccccCCC----cccHHHHHhcCCCEEecCCCCCCC-CC-------C----
Q 025169 157 KIPV--EICLTSNIRT--------------ETISSLD----IHHFVDLYKAQHPLVLCTDDSGVF-ST-------S---- 204 (257)
Q Consensus 157 ~i~v--~~cP~SN~~l--------------~~~~~~~----~~pi~~l~~~Gv~v~lgTD~~~~~-~~-------~---- 204 (257)
|+.+ ++||...... ...|+++ ...+.++++.|+..+||||..+.. .. +
T Consensus 256 G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~ 335 (461)
T 3sfw_A 256 GWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPFNFSGQKELGRRDFTKI 335 (461)
T ss_dssp TCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCCCTTTTGGGGTTCGGGS
T ss_pred CCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCCCchhhhhcccCCHhhC
Confidence 8776 7888421111 1111111 112477788899999999976543 11 0
Q ss_pred ------hHHHHHH----HHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 205 ------VSREYDL----AASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 205 ------l~~E~~~----a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
+-.-+.. +....+++..+++++ +.|+++..++++
T Consensus 336 ~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~ 380 (461)
T 3sfw_A 336 PNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKLFGMFP 380 (461)
T ss_dssp CCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCC
Confidence 0011212 222235999999998 589999999854
No 58
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=98.18 E-value=2.5e-05 Score=72.63 Aligned_cols=144 Identities=13% Similarity=0.021 Sum_probs=84.8
Q ss_pred CCCChhcHHHHHHHHHHcCCceeeecCCCCC-HhhH---------------------------HHHHh----cCC-cEEe
Q 025169 94 TKGEWTTFLPALKFAREQGLQITLHCGEIPN-KEEI---------------------------QSMLD----FLP-QRIG 140 (257)
Q Consensus 94 ~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~-~~~i---------------------------~~~l~----lg~-~ri~ 140 (257)
...+.+.++++++.|+++|+++++|+.+... .+.+ ...+. .|. ..+.
T Consensus 185 ~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~ 264 (501)
T 2vm8_A 185 FQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYIT 264 (501)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 3457789999999999999999999854210 0111 11111 222 2244
Q ss_pred eccccc-HHHHHHHhcCCCcEEeccccccee--------------c----cccCC-----CcccHHHHHhcCCCEEecCC
Q 025169 141 HACCFE-EEEWRKLKSSKIPVEICLTSNIRT--------------E----TISSL-----DIHHFVDLYKAQHPLVLCTD 196 (257)
Q Consensus 141 Hg~~l~-~~~~~~l~~~~i~v~~cP~SN~~l--------------~----~~~~~-----~~~pi~~l~~~Gv~v~lgTD 196 (257)
|+.... -+.++.+++.|+.+ +||+++..+ + ..+++ ...++.++++.|+++++|||
T Consensus 265 h~~~~~~~~~i~~~~~~G~~v-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD 343 (501)
T 2vm8_A 265 KVMSKSSAEVIAQARKKGTVV-YGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSA 343 (501)
T ss_dssp EECCHHHHHHHHHHHHTTCCE-EEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCC
T ss_pred eCCcHHHHHHHHHHHhCCCcE-EEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEec
Confidence 443211 23455557889887 477665221 0 00111 12346679999999999999
Q ss_pred CCCCCC-------------------C--ChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCCh
Q 025169 197 DSGVFS-------------------T--SVSREYDLAASAFSLGRREMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 197 ~~~~~~-------------------~--~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~ 238 (257)
.+.... . .+...+..+....+++..++++++ .|+++..++++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~ 407 (501)
T 2vm8_A 344 HCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYP 407 (501)
T ss_dssp BCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred CCCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCC
Confidence 754321 0 011112222222469999999985 89999999864
No 59
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=98.16 E-value=3.1e-05 Score=72.00 Aligned_cols=79 Identities=6% Similarity=-0.105 Sum_probs=47.8
Q ss_pred CcEEecccccceecccc------CCCcccHHH---HHhcCC-----------------CEEecCCCCCCCC-CChHHHHH
Q 025169 158 IPVEICLTSNIRTETIS------SLDIHHFVD---LYKAQH-----------------PLVLCTDDSGVFS-TSVSREYD 210 (257)
Q Consensus 158 i~v~~cP~SN~~l~~~~------~~~~~pi~~---l~~~Gv-----------------~v~lgTD~~~~~~-~~l~~E~~ 210 (257)
+.+.+|| +|..+.... ..+..|+.. +++.|+ ++++|||..+.++ ..+..++.
T Consensus 316 ~~v~~~p-~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~iGTD~~~~~~~~~~~~~~~ 394 (496)
T 1rk6_A 316 TLITWCK-PYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDERPHPRLWGT 394 (496)
T ss_dssp EEEEEES-SCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHH
T ss_pred eEEeccC-CCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEEecCCCCCCCCCCchhhcc
Confidence 6677788 665541100 014556654 556777 8999999865432 22222222
Q ss_pred HHHHh------CC-CCHHHHHHH-HHHHHHHcCCC
Q 025169 211 LAASA------FS-LGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 211 ~a~~~------~~-ls~~~v~~~-~~n~~~~~~~~ 237 (257)
+.... .+ ++..+++++ +.|+++..+++
T Consensus 395 ~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl~ 429 (496)
T 1rk6_A 395 FPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLA 429 (496)
T ss_dssp HHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCT
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCC
Confidence 22111 23 899999998 68999999885
No 60
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.13 E-value=0.00014 Score=62.09 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=90.5
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCC-cEEeecccccHHHHHHHhcCCCcEEecccccceeccccCC
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSL 176 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~ 176 (257)
+.|++.++.|++.|+|+.+|++.. ...+.+.++ .+. ..+-|+..-+.+.++.+.+.|+.+.+++.+..
T Consensus 126 ~~f~~~~~la~~~~lPv~iH~~~a--~~~~~~il~~~~~~~~v~H~~~g~~~~~~~~~~~g~~i~~~g~~~~-------- 195 (272)
T 2y1h_A 126 QVLIRQIQLAKRLNLPVNVHSRSA--GRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIR-------- 195 (272)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTC--HHHHHHHHHHTTCCSEEEETCCSCHHHHHHHHHTTCEEEECGGGGT--------
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCc--HHHHHHHHHhCCCCCEEEEccCCCHHHHHHHHHCCCEEEECCcccC--------
Confidence 468889999999999999999754 344444443 444 44669987777888888899999988876521
Q ss_pred CcccHHHHHhcC--CCEEecCCCCCCC------C--CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCC
Q 025169 177 DIHHFVDLYKAQ--HPLVLCTDDSGVF------S--TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 177 ~~~pi~~l~~~G--v~v~lgTD~~~~~------~--~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~ 237 (257)
. ..++++.+.. -++.++||.|-.. + ..+..-+..+++..|++.+++.++ ..|+.+...++
T Consensus 196 ~-~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 196 S-GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFPKL 266 (272)
T ss_dssp C-HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHSTTH
T ss_pred c-HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHhH
Confidence 1 1366666653 3689999998432 1 234445555666679999999887 57988876653
No 61
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.05 E-value=0.00038 Score=60.55 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=92.4
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCC---cEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP---QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~---~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
+.|++.+++|++.|+|+.+|+.+. ...+.+.++ .+. ..+.||..-+.++++.+.+.|..+.+.+..... .
T Consensus 114 ~~F~~ql~lA~e~~lPv~iH~r~a--~~~~l~il~~~~~~~~~~V~H~fsG~~e~a~~~l~~G~yis~~g~i~~~-k--- 187 (287)
T 3rcm_A 114 KALEAQLTLAAQLRLPVFLHERDA--SERLLAILKDYRDHLTGAVVHCFTGEREALFAYLDLDLHIGITGWICDE-R--- 187 (287)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHTTGGGCSCEEECSCCCCHHHHHHHHHTTCEEEECGGGGCT-T---
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCc--HHHHHHHHHHcCCCCCeEEEEeCCCCHHHHHHHHHCCcEEEECchhccc-c---
Confidence 568888999999999999999754 445555554 332 357899766888888888899988877532220 0
Q ss_pred CCCcccHHHHHhcC--CCEEecCCCCCCCC--------------CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCC
Q 025169 175 SLDIHHFVDLYKAQ--HPLVLCTDDSGVFS--------------TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFAN 237 (257)
Q Consensus 175 ~~~~~pi~~l~~~G--v~v~lgTD~~~~~~--------------~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~ 237 (257)
....++++++.. =++.+.||.|-... ..+..-+..++...|++.+++.+++ .|+.+...++
T Consensus 188 --~~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~lA~~~g~s~eev~~~~~~N~~rlf~l~ 265 (287)
T 3rcm_A 188 --RGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHRGESAEHTAAHTTATARDFFQLP 265 (287)
T ss_dssp --TCGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTTCC
T ss_pred --CHHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHCCC
Confidence 112356666552 35899999874321 1355556777677799999999885 7888877776
Q ss_pred hH
Q 025169 238 GR 239 (257)
Q Consensus 238 ~~ 239 (257)
+.
T Consensus 266 ~~ 267 (287)
T 3rcm_A 266 AE 267 (287)
T ss_dssp CC
T ss_pred hh
Confidence 53
No 62
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=97.88 E-value=6.7e-05 Score=67.20 Aligned_cols=136 Identities=12% Similarity=0.123 Sum_probs=89.5
Q ss_pred CCChhcHHHHHHHHHHcCC------ceeeecCCCCC-HhhHHHHHhcCCcEEe-----ecccccH----HHHHHHhcCCC
Q 025169 95 KGEWTTFLPALKFAREQGL------QITLHCGEIPN-KEEIQSMLDFLPQRIG-----HACCFEE----EEWRKLKSSKI 158 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl------~v~~Ha~E~~~-~~~i~~~l~lg~~ri~-----Hg~~l~~----~~~~~l~~~~i 158 (257)
..+.++++++.+.|+..++ .+++|++++.. .+.+.++.+.|...+. |. +.++ +.++.+++.+.
T Consensus 172 ~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~~~~~~~g~~~v~~l~~~h~-~~~~~~~~~~~~~~~~~~~ 250 (390)
T 1onw_A 172 APDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLENCDVPISKLLPTHV-NRNVPLFEQALEFARKGGT 250 (390)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHHHHHHHTCCCCGGGEEEECG-GGSHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHHHHHHhccCCceEEeecccc-ccCHHHHHHHHHHHhcCCc
Confidence 3566788888888776553 37889876532 2344555555543332 43 2233 45677777776
Q ss_pred cEEecccccceeccccCCCcccHHHHHhcCCC---EEecCCCCCCCC----------------CChHHHHHHHHHhCCCC
Q 025169 159 PVEICLTSNIRTETISSLDIHHFVDLYKAQHP---LVLCTDDSGVFS----------------TSVSREYDLAASAFSLG 219 (257)
Q Consensus 159 ~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~---v~lgTD~~~~~~----------------~~l~~E~~~a~~~~~ls 219 (257)
....||.++. . . ...++.++++.|++ |+++||..+... .++..+++.++...+++
T Consensus 251 ~~~~~~~~~~-~-~----~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 324 (390)
T 1onw_A 251 IDITSSIDEP-V-A----PAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFS 324 (390)
T ss_dssp EEEETTCCSS-S-C----HHHHHHHHHHTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHHHHHHCCC
T ss_pred cccccccCCC-C-c----CHHHHHHHHHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHHHHHHHHHHHcCCC
Confidence 6667775432 1 1 34578999999986 899999743211 15667777666556899
Q ss_pred HHHHHHH-HHHHHHHcCCC
Q 025169 220 RREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 220 ~~~v~~~-~~n~~~~~~~~ 237 (257)
..+++++ +.|+++..+++
T Consensus 325 ~~~~~~~~t~npA~~~gl~ 343 (390)
T 1onw_A 325 ISDALRPLTSSVAGFLNLT 343 (390)
T ss_dssp HHHHHGGGTHHHHHHTTCT
T ss_pred HHHHHHHHhHHHHHHhCCC
Confidence 9999998 58999999885
No 63
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=97.86 E-value=0.00039 Score=58.93 Aligned_cols=129 Identities=16% Similarity=0.169 Sum_probs=86.9
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cC---CcEEeecccccHHHHHHHhcCCCcEEeccccc-ceeccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL---PQRIGHACCFEEEEWRKLKSSKIPVEICLTSN-IRTETI 173 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg---~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN-~~l~~~ 173 (257)
+.|.+.++.|+++|+|+.+|+.+. ...+.+.++ .+ ...+.||..-+.+.++.+.+.|+.+.++.... ..
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a--~~~~~~il~~~~~~~~~~v~H~~~g~~~~~~~~~~~g~yi~~~g~~~~~~---- 185 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDA--HERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDER---- 185 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHGGGGGGSSCEEECSCCCCHHHHHHHHHTTCEEEECGGGGCTT----
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCc--hHHHHHHHHhcCCCCCcEEEEccCCCHHHHHHHHHCCeEEEECccccCCc----
Confidence 348889999999999999999754 444445453 33 24577987667788888888899888775321 10
Q ss_pred cCCCcccHHHHHhcCC--CEEecCCCCCCCC--------------CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCC
Q 025169 174 SSLDIHHFVDLYKAQH--PLVLCTDDSGVFS--------------TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFA 236 (257)
Q Consensus 174 ~~~~~~pi~~l~~~Gv--~v~lgTD~~~~~~--------------~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~ 236 (257)
....++++++..- ++.++||.|-... ..+..-+..++...|+|.+++.+++ .|+.+...+
T Consensus 186 ---~~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a~~~g~~~e~~~~~~~~Na~rl~~l 262 (264)
T 1xwy_A 186 ---RGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI 262 (264)
T ss_dssp ---TSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCC
T ss_pred ---CcHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence 1123566666532 6999999974321 1234455555566799999998885 788876544
No 64
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=97.78 E-value=0.00023 Score=61.95 Aligned_cols=133 Identities=13% Similarity=0.045 Sum_probs=81.3
Q ss_pred hcHHHHHHHHHHcCCceeeecCCC-CCHhhHHHHHh-cCC---c-EEeeccc-ccHHHHHHHhcCCCcEEecccccceec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEI-PNKEEIQSMLD-FLP---Q-RIGHACC-FEEEEWRKLKSSKIPVEICLTSNIRTE 171 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~-~~~~~i~~~l~-lg~---~-ri~Hg~~-l~~~~~~~l~~~~i~v~~cP~SN~~l~ 171 (257)
+.|+...+.|++.|+|+.+|++|. .....+.+.++ .|. . .+.|+.. .+.+.++.+.+.|..+.++..+.....
T Consensus 151 ~~~~~~~~lA~~~~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~ 230 (314)
T 2vc7_A 151 KVIRAAAIANKETKVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFL 230 (314)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTCTTTS
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCcccCC
Confidence 457788899999999999999751 11223333333 354 2 4789986 468888899999999888742211000
Q ss_pred cccCCCcccHHHHHhc--CCCEEecCCCCCCC-----------------CC-ChHHH-HHHHHHhCCCCHHHHHHHH-HH
Q 025169 172 TISSLDIHHFVDLYKA--QHPLVLCTDDSGVF-----------------ST-SVSRE-YDLAASAFSLGRREMFQLA-KS 229 (257)
Q Consensus 172 ~~~~~~~~pi~~l~~~--Gv~v~lgTD~~~~~-----------------~~-~l~~E-~~~a~~~~~ls~~~v~~~~-~n 229 (257)
.. .-...-+.+++++ +=++.++||.|... +. .+..+ +..+ ...|++.+++.+++ .|
T Consensus 231 ~~-~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~l-~~~g~~~e~~~~~~~~N 308 (314)
T 2vc7_A 231 PV-DKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTIPFL-KRNGVNEEVIATIFKEN 308 (314)
T ss_dssp CH-HHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHHHHH-HHTTCCHHHHHHHHTHH
T ss_pred CH-HHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHHHHH-HHcCCCHHHHHHHHHHC
Confidence 00 0011125566675 56789999986321 11 11222 2222 44699999998875 68
Q ss_pred HHHH
Q 025169 230 AVKF 233 (257)
Q Consensus 230 ~~~~ 233 (257)
+.+.
T Consensus 309 ~~rl 312 (314)
T 2vc7_A 309 PKKF 312 (314)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 65
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=97.70 E-value=0.00049 Score=58.87 Aligned_cols=132 Identities=12% Similarity=0.059 Sum_probs=82.8
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHH-hcCCc----EEeeccc-ccHHHHHHHhcCCCcEEecccccceecc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSML-DFLPQ----RIGHACC-FEEEEWRKLKSSKIPVEICLTSNIRTET 172 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l-~lg~~----ri~Hg~~-l~~~~~~~l~~~~i~v~~cP~SN~~l~~ 172 (257)
+.|++.++.|++.|+++.+|++.......+.+.+ +.|.. .+.|+.. .+.+.++.++++|..+.++..+ ....
T Consensus 138 ~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~--~~~~ 215 (291)
T 1bf6_A 138 KVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIG--KNSY 215 (291)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGCSHHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTT--CTTT
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCCChHHHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccCc--ccCC
Confidence 4588899999999999999996322122222333 34542 5789954 5778888889999888775331 0000
Q ss_pred ccC-CCcccHHHHHhcC--CCEEecCCCCCCC--------C-CChHH-HHHHHHHhCCCCHHHHHHHH-HHHHHH
Q 025169 173 ISS-LDIHHFVDLYKAQ--HPLVLCTDDSGVF--------S-TSVSR-EYDLAASAFSLGRREMFQLA-KSAVKF 233 (257)
Q Consensus 173 ~~~-~~~~pi~~l~~~G--v~v~lgTD~~~~~--------~-~~l~~-E~~~a~~~~~ls~~~v~~~~-~n~~~~ 233 (257)
.+. .....+.++++.| -++.++||.|... + ..+.. .+..+ ...|++.+++.+++ .|+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~N~~rl 289 (291)
T 1bf6_A 216 YPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQL-RQSGFSQADVDVMLRENPSQF 289 (291)
T ss_dssp SCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHHHHH-HHTTCCHHHHHHHHTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHHHHH-HHcCCCHHHHHHHHHHhHHHH
Confidence 110 0112367788888 6789999987431 1 12222 23333 44689999998885 687664
No 66
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=97.70 E-value=0.00033 Score=64.02 Aligned_cols=143 Identities=15% Similarity=0.106 Sum_probs=83.6
Q ss_pred CChhcHHHHHHHHHHcCCceeeecCCCCCH----------------------------hhHHHHHh----cCCc-EEeec
Q 025169 96 GEWTTFLPALKFAREQGLQITLHCGEIPNK----------------------------EEIQSMLD----FLPQ-RIGHA 142 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~----------------------------~~i~~~l~----lg~~-ri~Hg 142 (257)
.+.+.+.++++.|++.|+++.+|+.+.... ..+.+++. .|.. .+.|.
T Consensus 166 ~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~ 245 (448)
T 3hm7_A 166 SHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHV 245 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 367889999999999999999998542100 01222232 2443 34444
Q ss_pred ccc-cHHHHHHHhcCCCc--EEecccccceec-----------cccCCC----cccHHHHHhcCCCEEecCCCCCCCC--
Q 025169 143 CCF-EEEEWRKLKSSKIP--VEICLTSNIRTE-----------TISSLD----IHHFVDLYKAQHPLVLCTDDSGVFS-- 202 (257)
Q Consensus 143 ~~l-~~~~~~~l~~~~i~--v~~cP~SN~~l~-----------~~~~~~----~~pi~~l~~~Gv~v~lgTD~~~~~~-- 202 (257)
... .-+.++..+++|+. .++||....... ..|+++ ..++.++++.|+..++|||..+...
T Consensus 246 s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD~~p~~~~~ 325 (448)
T 3hm7_A 246 SSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLPQM 325 (448)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCCBCCCCGGG
T ss_pred CCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeCCCCCCHHH
Confidence 322 23456666677754 577774332211 111111 2246777888999999999543221
Q ss_pred -----------------CChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 203 -----------------TSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 203 -----------------~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
..+..-+..++...+++.++++++ +.|+++..++++
T Consensus 326 k~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~~ 379 (448)
T 3hm7_A 326 KTGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLYP 379 (448)
T ss_dssp GCCSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCTT
T ss_pred cccCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCCC
Confidence 011111111222458999999998 589999998844
No 67
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=97.63 E-value=0.0024 Score=55.44 Aligned_cols=129 Identities=13% Similarity=0.130 Sum_probs=88.1
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCC---cEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP---QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~---~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
+.|++.+++|++.|+|+.+|+.+. ...+.+.++ .+. ..+.||..-+.+.++.+.+.|+.+.++..+ .
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a--~~~~~~il~~~~~~~~~~i~H~f~g~~~~~~~~l~~g~yi~~~g~~-~------ 197 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNS--HAEFLDITKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCS-L------ 197 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESC--HHHHHHHHHHTGGGSSCEEETTCCCCHHHHHHHHHTTCEEEECGGG-S------
T ss_pred HHHHHHHHHHHHhCCcEEEEecCc--hHHHHHHHHhccCCCCcEEEEccCCCHHHHHHHHhcCcEEEEcccc-c------
Confidence 467888899999999999999754 444445554 332 458999776888888888899988876532 1
Q ss_pred CCCcccHHHHHhcC--CCEEecCCCCCCC-------------------------------C-CChHHHHHHHHHhCCCCH
Q 025169 175 SLDIHHFVDLYKAQ--HPLVLCTDDSGVF-------------------------------S-TSVSREYDLAASAFSLGR 220 (257)
Q Consensus 175 ~~~~~pi~~l~~~G--v~v~lgTD~~~~~-------------------------------~-~~l~~E~~~a~~~~~ls~ 220 (257)
......++++.. =++-++||.|-.. . ..+...+..+++..|++.
T Consensus 198 --~~~~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~~~~ia~l~g~~~ 275 (301)
T 2xio_A 198 --KTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDP 275 (301)
T ss_dssp --SSHHHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHHHHHHHHHHTCCH
T ss_pred --CChHHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHHHHHHHHHHCcCH
Confidence 111223555542 2589999997421 1 124455566666679999
Q ss_pred HHHHHHH-HHHHHHcCCCh
Q 025169 221 REMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 221 ~~v~~~~-~n~~~~~~~~~ 238 (257)
+++.+++ .|+.+..+++.
T Consensus 276 e~~~~~~~~Na~rlf~~~~ 294 (301)
T 2xio_A 276 LELANTLYNNTIKVFFPVI 294 (301)
T ss_dssp HHHHHHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHHHHHHhCchh
Confidence 9999885 78888776654
No 68
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=97.60 E-value=0.00018 Score=65.53 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=83.0
Q ss_pred CCCCChhcHHHHHHHHHHcCCceeeecCCCCC---------H----------------hhHHHHHh----cCCc-EEeec
Q 025169 93 PTKGEWTTFLPALKFAREQGLQITLHCGEIPN---------K----------------EEIQSMLD----FLPQ-RIGHA 142 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~---------~----------------~~i~~~l~----lg~~-ri~Hg 142 (257)
.+..+++.++++++.|+++|+++++|+.+... . ..+...+. .|.. .+.|.
T Consensus 152 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~ 231 (424)
T 3gri_A 152 VGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHV 231 (424)
T ss_dssp SCCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred cCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 34557788999999999999999999864320 0 01112222 2432 24444
Q ss_pred ccc-cHHHHHHHhcCCCc--EEecccccceec-----------cccCCC----cccHHHHHhcCCCEEecCCCCCC----
Q 025169 143 CCF-EEEEWRKLKSSKIP--VEICLTSNIRTE-----------TISSLD----IHHFVDLYKAQHPLVLCTDDSGV---- 200 (257)
Q Consensus 143 ~~l-~~~~~~~l~~~~i~--v~~cP~SN~~l~-----------~~~~~~----~~pi~~l~~~Gv~v~lgTD~~~~---- 200 (257)
... .-+.++..++.|+. .++||....... ..|+++ ...+.+.++.|+..+||||..+.
T Consensus 232 s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~~~~~ 311 (424)
T 3gri_A 232 STKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDE 311 (424)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCCCHHH
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHH
Confidence 321 12345555666755 577884322211 011211 12356678889999999996322
Q ss_pred ---------C---CCC--hHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCC
Q 025169 201 ---------F---STS--VSREYDLAASAFSLGRREMFQL-AKSAVKFIFA 236 (257)
Q Consensus 201 ---------~---~~~--l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~ 236 (257)
+ +.. +..-+..+....+++.++++++ +.|+++..++
T Consensus 312 k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~ 362 (424)
T 3gri_A 312 KAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL 362 (424)
T ss_dssp HTSCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC
T ss_pred ccCCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC
Confidence 1 111 1111212223357999999997 5899999887
No 69
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.60 E-value=0.0014 Score=58.88 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=92.0
Q ss_pred ceEEEeccCCCCCCCh---hcHHHHHHHHHHcCCceeeecCCCCCH-hhHHHHHhcCC--c--EEee-cccccHHHHHHH
Q 025169 83 GVVGIDLSGNPTKGEW---TTFLPALKFAREQGLQITLHCGEIPNK-EEIQSMLDFLP--Q--RIGH-ACCFEEEEWRKL 153 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~---~~~~~~~~~A~~~gl~v~~Ha~E~~~~-~~i~~~l~lg~--~--ri~H-g~~l~~~~~~~l 153 (257)
++++..... ...++ ..|++..+.|++.|+|+.+|..+.... +.+....+.|+ + .++| |..-+++..+.+
T Consensus 176 G~I~~~~~~--~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~ 253 (360)
T 3tn4_A 176 GVIKLASSK--GRITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKT 253 (360)
T ss_dssp SEEEEECBT--TBCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHH
T ss_pred eEEEEEccC--CCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHH
Confidence 466665332 22333 458888999999999999999765432 23333334565 3 4789 566688888999
Q ss_pred hcCCCcEEeccc-ccceeccccCC-CcccHHHHHhcCC--CEEecCCCCC-------C---------C--C-CChHHHHH
Q 025169 154 KSSKIPVEICLT-SNIRTETISSL-DIHHFVDLYKAQH--PLVLCTDDSG-------V---------F--S-TSVSREYD 210 (257)
Q Consensus 154 ~~~~i~v~~cP~-SN~~l~~~~~~-~~~pi~~l~~~Gv--~v~lgTD~~~-------~---------~--~-~~l~~E~~ 210 (257)
.+.|..+.+--. .+......++. ...-+.++.+.|- +|.|+||.+. . + + ..++.++.
T Consensus 254 l~~G~yl~fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~i 333 (360)
T 3tn4_A 254 LAYGVYIAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNII 333 (360)
T ss_dssp HTTTCEEEECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHH
T ss_pred HHcCCEEEEcccccccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHH
Confidence 999998876421 01111110000 1123778888885 6999999621 0 1 1 23444444
Q ss_pred HHHHhCCCCHHHHHHHH-HHHHHH
Q 025169 211 LAASAFSLGRREMFQLA-KSAVKF 233 (257)
Q Consensus 211 ~a~~~~~ls~~~v~~~~-~n~~~~ 233 (257)
-..+..|+|.++|-+++ .|..+.
T Consensus 334 p~L~~~Gvs~e~I~~i~~~NP~rl 357 (360)
T 3tn4_A 334 PALKNEGIRDEVLEQMFIGNPAAL 357 (360)
T ss_dssp HHHHHTTCCHHHHHHHHTHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHhHHHH
Confidence 44455799999999986 677654
No 70
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.58 E-value=0.00077 Score=60.57 Aligned_cols=138 Identities=11% Similarity=0.021 Sum_probs=91.0
Q ss_pred hcHHHHHHHHHHcCCceeeec-CCCCCHhhHHHHHh-cCC--cE--Eeeccc-c-cHHHHHHHhcCCCcEEeccccccee
Q 025169 99 TTFLPALKFAREQGLQITLHC-GEIPNKEEIQSMLD-FLP--QR--IGHACC-F-EEEEWRKLKSSKIPVEICLTSNIRT 170 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha-~E~~~~~~i~~~l~-lg~--~r--i~Hg~~-l-~~~~~~~l~~~~i~v~~cP~SN~~l 170 (257)
..|++..+.|++.|+||.+|+ +-.....++.+.++ .|. .+ +.||.. - +.+..+.+.+.|..+.+.-..-..
T Consensus 190 ~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~- 268 (364)
T 3k2g_A 190 KSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDF- 268 (364)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCC-
T ss_pred HHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCcccc-
Confidence 457888899999999999997 22122344444443 443 33 469984 5 888888888999988776432100
Q ss_pred ccccC--------C-CcccHHHHHhcCC--CEEecCCCCCC--------CC-CChHHHHHHHHHhCCCCHHHHHHHH-HH
Q 025169 171 ETISS--------L-DIHHFVDLYKAQH--PLVLCTDDSGV--------FS-TSVSREYDLAASAFSLGRREMFQLA-KS 229 (257)
Q Consensus 171 ~~~~~--------~-~~~pi~~l~~~Gv--~v~lgTD~~~~--------~~-~~l~~E~~~a~~~~~ls~~~v~~~~-~n 229 (257)
.+++ . ...-++++.++|. ++.|+||.|.. ++ ..+..++...+...|++.+++.+++ .|
T Consensus 269 -~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~~~~~l~~~Gis~eei~~~~~~N 347 (364)
T 3k2g_A 269 -FYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFLPRLRRHGLDDAALETLMVTN 347 (364)
T ss_dssp -EETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHHHHHHHTTCCHHHHHHHHTHH
T ss_pred -cccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 0110 0 1124778888884 79999998632 22 3444555545556899999999985 79
Q ss_pred HHHHcCCCh
Q 025169 230 AVKFIFANG 238 (257)
Q Consensus 230 ~~~~~~~~~ 238 (257)
+.+...++.
T Consensus 348 p~rlf~l~~ 356 (364)
T 3k2g_A 348 PRRVFDASI 356 (364)
T ss_dssp HHHHHCTTS
T ss_pred HHHHhCCCc
Confidence 988877665
No 71
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=97.57 E-value=0.00023 Score=64.61 Aligned_cols=153 Identities=13% Similarity=0.075 Sum_probs=89.0
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCC---------------------H----hhHHHHHh----c
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPN---------------------K----EEIQSMLD----F 134 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~---------------------~----~~i~~~l~----l 134 (257)
.+++...+ .+..+++.+.++++.|++.|+++++|+.+..- . ..+...+. .
T Consensus 145 ~~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~ 223 (428)
T 3mpg_A 145 AFAFTDDG-VGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAA 223 (428)
T ss_dssp CCCEECTT-SCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCC-cCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 44443322 33457789999999999999999999976410 0 11222222 3
Q ss_pred CCc-EEeecccc-cHHHHHHHhcCCCcE--Eeccccccee-----------ccccCCC----cccHHHHHhcCCCEEecC
Q 025169 135 LPQ-RIGHACCF-EEEEWRKLKSSKIPV--EICLTSNIRT-----------ETISSLD----IHHFVDLYKAQHPLVLCT 195 (257)
Q Consensus 135 g~~-ri~Hg~~l-~~~~~~~l~~~~i~v--~~cP~SN~~l-----------~~~~~~~----~~pi~~l~~~Gv~v~lgT 195 (257)
|.. .+.|+... .-+.++..+++|+.+ ++||...... ...|+++ ..++.+++..|+..++||
T Consensus 224 g~~~~i~H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~t 303 (428)
T 3mpg_A 224 DCHYHVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIAT 303 (428)
T ss_dssp TCCEEECSCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEc
Confidence 442 34555432 224566667777655 5577422111 1111111 224677888899999999
Q ss_pred CCCCCCC----------------C--ChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCC
Q 025169 196 DDSGVFS----------------T--SVSREYDLAASAFSLGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 196 D~~~~~~----------------~--~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~ 237 (257)
|..+... . .+..-+.......+++..+++++ +.|+++..+++
T Consensus 304 Dh~p~~~~~k~~~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 304 DHAPHTAEEKAQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLE 364 (428)
T ss_dssp CBCCCCTTGGGSCTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTCS
T ss_pred CCCCCCHHHcccCHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC
Confidence 9654321 1 12222222223346999999997 58999998874
No 72
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=97.55 E-value=0.00066 Score=60.01 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=83.8
Q ss_pred hcHHHHHHHHHHcCCceeeecCC-CCCHhhHHHHHh-cCC--c--EEeecc-cccHHHHHHHhcCCCcEEec--ccccce
Q 025169 99 TTFLPALKFAREQGLQITLHCGE-IPNKEEIQSMLD-FLP--Q--RIGHAC-CFEEEEWRKLKSSKIPVEIC--LTSNIR 169 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E-~~~~~~i~~~l~-lg~--~--ri~Hg~-~l~~~~~~~l~~~~i~v~~c--P~SN~~ 169 (257)
+.|+...+.|++.|+|+.+|++- .....++.+.++ .|. . .+.||. ..+.+..+.+.+.|..+.+. ....+.
T Consensus 148 ~~f~~q~~lA~~~glPv~iH~~~~~r~a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G~~tf~ 227 (330)
T 2ob3_A 148 LVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIG 227 (330)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCGGGTHHHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCCTT
T ss_pred HHHHHHHHHHHHhCCeEEEECCCCCCCHHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeCCCcccccc
Confidence 34788899999999999999851 111113333332 354 2 378998 46888899999999988776 221110
Q ss_pred ecc----------ccC-CCcccHHHHHhcC--CCEEecCCCCC-CCCC--------------Ch---HHHH-HHHHHhCC
Q 025169 170 TET----------ISS-LDIHHFVDLYKAQ--HPLVLCTDDSG-VFST--------------SV---SREY-DLAASAFS 217 (257)
Q Consensus 170 l~~----------~~~-~~~~pi~~l~~~G--v~v~lgTD~~~-~~~~--------------~l---~~E~-~~a~~~~~ 217 (257)
.+. .++ -....++++.+.| -++.|+||.|. .... .. ..++ ..+.. .|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~~~n~pn~~~~~~~~~ia~l~~-~G 306 (330)
T 2ob3_A 228 LEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLRE-KG 306 (330)
T ss_dssp CTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHHHHCTTGGGHHHHTHHHHHHH-TT
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCcccccCCCCcchHHHHHHHHHHH-cC
Confidence 000 000 0112378889999 78999999874 2110 11 2232 22222 79
Q ss_pred CCHHHHHHHH-HHHHHHc
Q 025169 218 LGRREMFQLA-KSAVKFI 234 (257)
Q Consensus 218 ls~~~v~~~~-~n~~~~~ 234 (257)
++.+++.+++ .|+++..
T Consensus 307 ~~~eev~~~~t~N~~rlf 324 (330)
T 2ob3_A 307 VPQETLAGITVTNPARFL 324 (330)
T ss_dssp CCHHHHHHHHTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 9999999986 6887754
No 73
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=97.50 E-value=0.0035 Score=58.35 Aligned_cols=198 Identities=10% Similarity=0.009 Sum_probs=108.3
Q ss_pred CCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEec--cC-CCCCCChhcHHHHHHHHHH
Q 025169 34 PVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDL--SG-NPTKGEWTTFLPALKFARE 110 (257)
Q Consensus 34 ~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l--~g-~~~~~~~~~~~~~~~~A~~ 110 (257)
.+..++++...+..+...+...+...+.. ...+...+..++..+ .++.++.+ .. .....+.+.+.++++.|++
T Consensus 97 ~~~~~~~~~~~~~a~~~~~d~~~~~~~~~-~~~~~l~el~~l~~~---~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~ 172 (490)
T 3dc8_A 97 QSLLEALTMWDNKSTRANCDYSFHMAITW-WGEQVFNEMETIVKD---KGINTFKHFMAYKGALMVDDDEMFSSFQRCAA 172 (490)
T ss_dssp CCHHHHHHHHHHHTTTCSSEEEEEEECCS-CSHHHHHHHHHHHHH---SCCCEEEEESCSTTTTBCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhhcccceeeeEEEEec-CcHHHHHHHHHHHHh---CCCCEEEEEecCCCCccCCHHHHHHHHHHHHh
Confidence 34456666666555566677766666554 233333344333322 23444433 22 2334577899999999999
Q ss_pred cCCceeeecCCCCCH-----------------------------hhHHHHHh----cCCcEEeeccccc-H---HHHHHH
Q 025169 111 QGLQITLHCGEIPNK-----------------------------EEIQSMLD----FLPQRIGHACCFE-E---EEWRKL 153 (257)
Q Consensus 111 ~gl~v~~Ha~E~~~~-----------------------------~~i~~~l~----lg~~ri~Hg~~l~-~---~~~~~l 153 (257)
.|+++++|+ |.... ..+..++. .|+. .|.++++ . +.++..
T Consensus 173 ~g~~v~~Ha-E~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~--lhi~HvSt~~~~~li~~a 249 (490)
T 3dc8_A 173 LGALPLVHA-ENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCP--VYIVHTSCEQAHEAIRRA 249 (490)
T ss_dssp HTCEEEEEC-SCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCC--EEESSCCSHHHHHHHHHH
T ss_pred cCCEEEEec-CChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCc--EEEEeCCCHHHHHHHHHH
Confidence 999999995 43210 01112222 2322 4555553 3 345666
Q ss_pred hcCCCcE--Eecccccceec---------------cccCCC----cccHHHHHhcCCCEEecCCCCCCC-----------
Q 025169 154 KSSKIPV--EICLTSNIRTE---------------TISSLD----IHHFVDLYKAQHPLVLCTDDSGVF----------- 201 (257)
Q Consensus 154 ~~~~i~v--~~cP~SN~~l~---------------~~~~~~----~~pi~~l~~~Gv~v~lgTD~~~~~----------- 201 (257)
+++|+.+ ++||-...... .-|+++ ...+.+.++.|...+|+||.....
T Consensus 250 k~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~~~~K~~g~~~f 329 (490)
T 3dc8_A 250 RAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQKRFGVGDF 329 (490)
T ss_dssp HHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCG
T ss_pred HHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCCHHHhhccCCCh
Confidence 6777665 56763211110 011111 112556678899999999954321
Q ss_pred --------CC-C-hHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 202 --------ST-S-VSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 202 --------~~-~-l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
+. . +.--+...+...+++..+++++ +.|+++..++.+
T Consensus 330 ~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~ 377 (490)
T 3dc8_A 330 TRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNIYP 377 (490)
T ss_dssp GGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred hhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 10 1 1111122233357999999997 589999998843
No 74
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.49 E-value=0.0016 Score=57.92 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=89.1
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCC--cE--Eeecc-cccHHHHHHHhcCCCcEEecccc-cceec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QR--IGHAC-CFEEEEWRKLKSSKIPVEICLTS-NIRTE 171 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~--~r--i~Hg~-~l~~~~~~~l~~~~i~v~~cP~S-N~~l~ 171 (257)
..|++..+.|++.|+||.+|++-.....+..+.++ .|. .+ +.||. .-+.+..+.+.+.|..+.+.-.. +.+..
T Consensus 173 ~~f~aq~~lA~~~glPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g~~t~~~~~ 252 (339)
T 3gtx_A 173 LFFRAAARVQRETGVPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVG 252 (339)
T ss_dssp HHHHHHHHHHHHHCCCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTT
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEccCccccccC
Confidence 45778889999999999999964333323344443 343 33 57998 46788888889999888775432 11100
Q ss_pred cccCC-CcccHHHHHhcCC--CEEecCCCCCC------------------CC-CChHHHHHHHHHhCCCCHHHHHHHH-H
Q 025169 172 TISSL-DIHHFVDLYKAQH--PLVLCTDDSGV------------------FS-TSVSREYDLAASAFSLGRREMFQLA-K 228 (257)
Q Consensus 172 ~~~~~-~~~pi~~l~~~Gv--~v~lgTD~~~~------------------~~-~~l~~E~~~a~~~~~ls~~~v~~~~-~ 228 (257)
.-.++ ...-+++++++|. ++.|+||.|.+ ++ ..+...+...++..|++.+++.+++ .
T Consensus 253 ~p~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~ 332 (339)
T 3gtx_A 253 TPTDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDLRRRGITEEQVGQMTVG 332 (339)
T ss_dssp CCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTH
T ss_pred CCchHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 00000 1123678888876 69999998853 11 2345666667777899999999986 7
Q ss_pred HHHHH
Q 025169 229 SAVKF 233 (257)
Q Consensus 229 n~~~~ 233 (257)
|+.+.
T Consensus 333 Np~rl 337 (339)
T 3gtx_A 333 NPARL 337 (339)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87664
No 75
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=97.43 E-value=0.00078 Score=57.52 Aligned_cols=129 Identities=13% Similarity=0.104 Sum_probs=84.3
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cC--C-cEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL--P-QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg--~-~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
+.|.+.++.|+++|+|+.+|+++. ...+.+.++ .+ . ..|-||..-+.+.++.+.+.|+.+.+.......
T Consensus 120 ~~f~~~~~~a~~~~lPv~iH~~~~--~~~~~~il~~~p~~~~~~I~H~~~g~~~~~~~~~~~g~y~~~sg~~~~~----- 192 (268)
T 1j6o_A 120 RVFVEQIELAGKLNLPLVVHIRDA--YSEAYEILRTESLPEKRGVIHAFSSDYEWAKKFIDLGFLLGIGGPVTYP----- 192 (268)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHHSCCCSSCEEETTCCSCHHHHHHHHHHTEEEEECGGGGCT-----
T ss_pred HHHHHHHHHHHHhCCCEEEEeCch--HHHHHHHHHhcCCCCCCEEEEcCCCCHHHHHHHHHCCCeEEeccccccc-----
Confidence 568889999999999999999753 445555554 44 2 446698777778888887778777665432211
Q ss_pred CCCcccHHHHHhc-C-CCEEecCCCCCCCC----------CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCC
Q 025169 175 SLDIHHFVDLYKA-Q-HPLVLCTDDSGVFS----------TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFA 236 (257)
Q Consensus 175 ~~~~~pi~~l~~~-G-v~v~lgTD~~~~~~----------~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~ 236 (257)
....++++++. | =++-+|||.|-... ..+..-+..++...+++.+++.+++ .|+.+...+
T Consensus 193 --~~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~la~~~~~~~e~~~~i~~~Na~rlf~l 265 (268)
T 1j6o_A 193 --KNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLGVPEAKVDEATTENARRIFLE 265 (268)
T ss_dssp --TCHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHS
T ss_pred --chHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCc
Confidence 11235566654 3 37999999874321 1233334444444689999998875 788776544
No 76
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.42 E-value=0.0014 Score=58.81 Aligned_cols=137 Identities=11% Similarity=0.039 Sum_probs=91.4
Q ss_pred hcHHHHHHHHHHc-CCceeeec-CCCCCHhhHHHHHh-c-CC--cE--Eeecc-c-ccHHHHHHHhcCCCcEEecccccc
Q 025169 99 TTFLPALKFAREQ-GLQITLHC-GEIPNKEEIQSMLD-F-LP--QR--IGHAC-C-FEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 99 ~~~~~~~~~A~~~-gl~v~~Ha-~E~~~~~~i~~~l~-l-g~--~r--i~Hg~-~-l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
..|++..+.|++. |+||.+|. +......++.+.+. . |. .+ +.||. . -+.+....+.+.|..+.+.-..-.
T Consensus 179 ~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~ 258 (365)
T 3rhg_A 179 NSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLD 258 (365)
T ss_dssp HHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCC
T ss_pred HHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCcc
Confidence 5578888999999 99999998 52222334444443 3 54 23 57998 4 577888888899999887643100
Q ss_pred eeccccC--------CCcccHHHHHhcCC--CEEecCCCCCCC--------C-CChHHHHHHHHHhCCCCHHHHHHHH-H
Q 025169 169 RTETISS--------LDIHHFVDLYKAQH--PLVLCTDDSGVF--------S-TSVSREYDLAASAFSLGRREMFQLA-K 228 (257)
Q Consensus 169 ~l~~~~~--------~~~~pi~~l~~~Gv--~v~lgTD~~~~~--------~-~~l~~E~~~a~~~~~ls~~~v~~~~-~ 228 (257)
. .+++ -...-++++.++|. ++.|+||.|... + ..+...+...++..|++.+++.+++ .
T Consensus 259 ~--tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~~~~~~~~~~~Gis~e~i~~~~~~ 336 (365)
T 3rhg_A 259 I--SFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVPNVFLSLLAQRGIDKTIIDKLCID 336 (365)
T ss_dssp C--BCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHHHTHHHHHHHTTCCHHHHHHHTTH
T ss_pred c--cccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0 0110 01123778888885 799999987533 1 2445556666677899999999985 7
Q ss_pred HHHHHcCCC
Q 025169 229 SAVKFIFAN 237 (257)
Q Consensus 229 n~~~~~~~~ 237 (257)
|+++...++
T Consensus 337 Np~rlf~l~ 345 (365)
T 3rhg_A 337 NPANLLAAE 345 (365)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHCCC
Confidence 988876554
No 77
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=97.39 E-value=0.005 Score=51.75 Aligned_cols=131 Identities=16% Similarity=0.106 Sum_probs=82.6
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cC---CcEEeecccccHHHHHHHhc-CCCcEEecccccceeccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL---PQRIGHACCFEEEEWRKLKS-SKIPVEICLTSNIRTETI 173 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg---~~ri~Hg~~l~~~~~~~l~~-~~i~v~~cP~SN~~l~~~ 173 (257)
+.|.+.++.|+++|+++.+|++.. ...+.+.++ .+ ...+.|+..-+.+.+..+.+ .|+.+.++......
T Consensus 109 ~~~~~~~~~a~~~~~pv~iH~~~~--~~~~~~~l~~~p~~~~~~i~H~~~g~~~~~~~~l~~~~~y~~~sg~~~~~---- 182 (265)
T 2gzx_A 109 EVFRKQIALAKRLKLPIIIHNREA--TQDCIDILLEEHAEEVGGIMHSFSGSPEIADIVTNKLNFYISLGGPVTFK---- 182 (265)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHHTTGGGTCEEETTCCSCHHHHHHHHHTSCCEEEECGGGGCS----
T ss_pred HHHHHHHHHHHHcCCcEEEEeccc--HHHHHHHHHhcCCCCCcEEEEcCCCCHHHHHHHHHHCCceEEecceeecC----
Confidence 458899999999999999999754 444444443 44 24577876545555555545 78888776443211
Q ss_pred cCCCcccHHHHHhc-C-CCEEecCCCCCCCC---------CChHHH-HHHHHHhCCCCHHHHHHHH-HHHHHHcCCCh
Q 025169 174 SSLDIHHFVDLYKA-Q-HPLVLCTDDSGVFS---------TSVSRE-YDLAASAFSLGRREMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 174 ~~~~~~pi~~l~~~-G-v~v~lgTD~~~~~~---------~~l~~E-~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~ 238 (257)
....+.++++. | =++-+|||.|-... ...... +..++...+++.+++.++. .|+.+...+++
T Consensus 183 ---~~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~Na~rl~~~~~ 257 (265)
T 2gzx_A 183 ---NAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFNLNS 257 (265)
T ss_dssp ---SCCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHC---
T ss_pred ---CcHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCch
Confidence 11246666664 3 47999999874321 122222 3344444799999998885 79988776654
No 78
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=97.38 E-value=0.0039 Score=58.57 Aligned_cols=144 Identities=11% Similarity=-0.018 Sum_probs=83.0
Q ss_pred CCCCChhcHHHHHHHHHHcCCceeeecCCCCCH--hhHHHHHhcCCc-----------------------------EEee
Q 025169 93 PTKGEWTTFLPALKFAREQGLQITLHCGEIPNK--EEIQSMLDFLPQ-----------------------------RIGH 141 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~--~~i~~~l~lg~~-----------------------------ri~H 141 (257)
.+..+.+.+.++++.|+++|+++++|+ |.... ..+..+.+.|.. .-.|
T Consensus 189 ~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~~ 267 (541)
T 2vr2_A 189 LYMVTDLELYEAFSRCKEIGAIAQVHA-ENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCPLY 267 (541)
T ss_dssp TTBCCHHHHHHHHHHHHHHTCEEEEEC-SCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEc-CCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCCEE
Confidence 345678899999999999999999998 43210 011111111110 1113
Q ss_pred cccc-cH---HHHHHHhcCCCcEEecccccceeccc------cCC-------Cccc----------HHHHHhcCCCEEec
Q 025169 142 ACCF-EE---EEWRKLKSSKIPVEICLTSNIRTETI------SSL-------DIHH----------FVDLYKAQHPLVLC 194 (257)
Q Consensus 142 g~~l-~~---~~~~~l~~~~i~v~~cP~SN~~l~~~------~~~-------~~~p----------i~~l~~~Gv~v~lg 194 (257)
.+++ ++ +.++.+++.|+.+ .|++.+..+..- +++ ...| +.+++..|+..++|
T Consensus 268 ~~h~ss~~~~~~i~~ar~~G~~v-~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~g 346 (541)
T 2vr2_A 268 IVHVMSKSAAKVIADARRDGKVV-YGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTG 346 (541)
T ss_dssp EEEECCHHHHHHHHHHHHTTCCE-EEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCCB
T ss_pred EEeCCCHHHHHHHHHHHHcCCeE-EEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEEE
Confidence 3333 22 3345567788765 467665544210 000 0122 45578999999999
Q ss_pred CCCCCCC-------------------C--CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCCh
Q 025169 195 TDDSGVF-------------------S--TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 195 TD~~~~~-------------------~--~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~ 238 (257)
||..... + ..+...+..+....+++..++++++ .|+++..++++
T Consensus 347 tD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~ 412 (541)
T 2vr2_A 347 TDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYP 412 (541)
T ss_dssp CCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred eCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCC
Confidence 9964321 1 1122223333333469999999985 89999998864
No 79
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=97.35 E-value=0.0037 Score=58.40 Aligned_cols=145 Identities=10% Similarity=-0.035 Sum_probs=86.1
Q ss_pred CCCCChhcHHHHHHHHHHcCCceeeecCCCCC-HhhHHHHHhcCC-----------------------------cEEeec
Q 025169 93 PTKGEWTTFLPALKFAREQGLQITLHCGEIPN-KEEIQSMLDFLP-----------------------------QRIGHA 142 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~-~~~i~~~l~lg~-----------------------------~ri~Hg 142 (257)
....+.+.++++++.|+++|+++++|+.+... ...+..+.+.|. ..-.|.
T Consensus 166 ~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi 245 (521)
T 2ftw_A 166 SFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYI 245 (521)
T ss_dssp TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 34568899999999999999999999843210 011111111111 011233
Q ss_pred cccc----HHHHHHHhcCCCcEEecccccceeccc-----c-C------C-Cccc----------HHHHHhcCCCEEecC
Q 025169 143 CCFE----EEEWRKLKSSKIPVEICLTSNIRTETI-----S-S------L-DIHH----------FVDLYKAQHPLVLCT 195 (257)
Q Consensus 143 ~~l~----~~~~~~l~~~~i~v~~cP~SN~~l~~~-----~-~------~-~~~p----------i~~l~~~Gv~v~lgT 195 (257)
.+++ -+.++.+++.|+.+ .|++++..+..- + . + ..+| +.+++..|+..++||
T Consensus 246 ~h~ss~~~~~~i~~~r~~G~~v-~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gs 324 (521)
T 2ftw_A 246 VHVQSIGAADVICKHRKEGVRV-YGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGT 324 (521)
T ss_dssp CSCCCHHHHHHHHHHHHTTCCE-EECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBC
T ss_pred EecCcHHHHHHHHHHHHcCCeE-EEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEe
Confidence 3442 23566778889885 577766544210 0 0 0 0112 344889999999999
Q ss_pred CCCCC-------------------CC--CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCCh
Q 025169 196 DDSGV-------------------FS--TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 196 D~~~~-------------------~~--~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~ 238 (257)
|.... .+ +.|...+..+....+++..++++++ .|+++..++++
T Consensus 325 D~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~ 389 (521)
T 2ftw_A 325 DNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYP 389 (521)
T ss_dssp CBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCCCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCC
Confidence 95321 11 1233344444444579999999985 89999998864
No 80
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=97.35 E-value=0.0009 Score=60.13 Aligned_cols=153 Identities=12% Similarity=0.105 Sum_probs=94.2
Q ss_pred ceEEEeccCCCCC-CChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCC--cE--Eeeccc-ccHHHHHHHh-
Q 025169 83 GVVGIDLSGNPTK-GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QR--IGHACC-FEEEEWRKLK- 154 (257)
Q Consensus 83 ~vvg~~l~g~~~~-~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~--~r--i~Hg~~-l~~~~~~~l~- 154 (257)
|++++++.....+ .-...|++..+.|++.|+||.+|.+......++.+.++ .|. .+ +.|+.. -+.+..+.+.
T Consensus 152 G~ikig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~ 231 (363)
T 3ovg_A 152 GIIKAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIK 231 (363)
T ss_dssp CEEEEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 4666655421111 11255888899999999999999975432223444443 343 33 568774 4555556666
Q ss_pred cCCCcEEecccccceeccccCC-CcccHHHHHhcCC--CEEecCCCCCC--------------CC-CChHHHHHHHHHhC
Q 025169 155 SSKIPVEICLTSNIRTETISSL-DIHHFVDLYKAQH--PLVLCTDDSGV--------------FS-TSVSREYDLAASAF 216 (257)
Q Consensus 155 ~~~i~v~~cP~SN~~l~~~~~~-~~~pi~~l~~~Gv--~v~lgTD~~~~--------------~~-~~l~~E~~~a~~~~ 216 (257)
+.|..+.+.-.. .....++. ...-++++.++|. ++.|+||.|.. ++ ..+...+..+++..
T Consensus 232 ~~G~yI~f~g~~--~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~~~~~~~a~~r 309 (363)
T 3ovg_A 232 ETGVTLCFDGPD--RVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLPLLKQV 309 (363)
T ss_dssp HHCCEEEECCTT--CTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHHHHHHH
T ss_pred HCCcEEEECCee--ccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHHHHHHHHHHHc
Confidence 788887765221 11111100 1124778888885 69999999832 12 23455666666667
Q ss_pred CCCHHHHHHHH-HHHHHHcCCC
Q 025169 217 SLGRREMFQLA-KSAVKFIFAN 237 (257)
Q Consensus 217 ~ls~~~v~~~~-~n~~~~~~~~ 237 (257)
|++.+++.+++ .|+.+...++
T Consensus 310 Gis~eei~~it~~Np~rlf~l~ 331 (363)
T 3ovg_A 310 GVSKEAIFDILVNNPKRVLAFD 331 (363)
T ss_dssp TCCHHHHHHHHTHHHHHHTSCC
T ss_pred CCCHHHHHHHHHHHHHHHHCCC
Confidence 99999999986 7988887654
No 81
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.34 E-value=0.003 Score=55.99 Aligned_cols=136 Identities=10% Similarity=0.054 Sum_probs=85.9
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCC--cE--Eeecc-cccHHHHHHHhcCCCcEEecccccceecc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QR--IGHAC-CFEEEEWRKLKSSKIPVEICLTSNIRTET 172 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~--~r--i~Hg~-~l~~~~~~~l~~~~i~v~~cP~SN~~l~~ 172 (257)
..|++..+.|++.|+||.+|........+..+.++ .|. .+ +.||. .-+.+..+.+.+.|..+.+.-..... .
T Consensus 168 ~~f~aq~~~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t~~--~ 245 (330)
T 3pnz_A 168 KTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIK--Y 245 (330)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGCCHHHHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTCTT--T
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCcChHHHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcccC--C
Confidence 55888899999999999999975322222334443 444 33 56986 45777888888999888776321110 0
Q ss_pred ccCC-CcccHHHHHhcCC--CEEecCCCCCCC---------C-CChHHHH----HHHHHhCCCCHHH-HHHHH-HHHHHH
Q 025169 173 ISSL-DIHHFVDLYKAQH--PLVLCTDDSGVF---------S-TSVSREY----DLAASAFSLGRRE-MFQLA-KSAVKF 233 (257)
Q Consensus 173 ~~~~-~~~pi~~l~~~Gv--~v~lgTD~~~~~---------~-~~l~~E~----~~a~~~~~ls~~~-v~~~~-~n~~~~ 233 (257)
.++. ...-+.++.++|. ++.|+||.|... + ..+..++ ..+++..|++.++ +.+++ .|+.+.
T Consensus 246 ~~~~~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rl 325 (330)
T 3pnz_A 246 APESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARC 325 (330)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHHHH
Confidence 0000 1123777888884 699999987311 1 1222332 2224668999998 98885 788877
Q ss_pred cCC
Q 025169 234 IFA 236 (257)
Q Consensus 234 ~~~ 236 (257)
..+
T Consensus 326 f~l 328 (330)
T 3pnz_A 326 FTF 328 (330)
T ss_dssp SSC
T ss_pred hcC
Confidence 654
No 82
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=97.25 E-value=0.0026 Score=58.83 Aligned_cols=141 Identities=16% Similarity=0.120 Sum_probs=83.9
Q ss_pred CCChhcHHHHHHHHHHcCCceeeecCCCC------------------------CH----hhHHHHHh----cCCcEEeec
Q 025169 95 KGEWTTFLPALKFAREQGLQITLHCGEIP------------------------NK----EEIQSMLD----FLPQRIGHA 142 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~------------------------~~----~~i~~~l~----lg~~ri~Hg 142 (257)
..+.+.+.++++.|++.|+++.+|+.+.. +. ..+..++. .|.. .|.
T Consensus 183 ~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~--lhi 260 (473)
T 3e74_A 183 DVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCR--LHV 260 (473)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCC--EEE
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCc--EEE
Confidence 34677899999999999999999986431 00 01222222 2422 344
Q ss_pred cccc-H---HHHHHHhcCCCcE--Eeccccccee-----------ccccCCC----cccHHHHHhcCCCEEecCCCCCCC
Q 025169 143 CCFE-E---EEWRKLKSSKIPV--EICLTSNIRT-----------ETISSLD----IHHFVDLYKAQHPLVLCTDDSGVF 201 (257)
Q Consensus 143 ~~l~-~---~~~~~l~~~~i~v--~~cP~SN~~l-----------~~~~~~~----~~pi~~l~~~Gv~v~lgTD~~~~~ 201 (257)
.+++ . +.++..+++|+.+ ++||...... ...|+++ ..++.+.++.|+.++||||.....
T Consensus 261 ~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tDh~p~~ 340 (473)
T 3e74_A 261 CHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCP 340 (473)
T ss_dssp CSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCCBCCCC
T ss_pred EeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeCCCCCC
Confidence 4442 2 4566667777555 6677322211 1112222 123667788999999999965332
Q ss_pred -------------C-CChHHHHHH----HHHhCCCCHHHHHHH-HHHHHHHcCCC
Q 025169 202 -------------S-TSVSREYDL----AASAFSLGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 202 -------------~-~~l~~E~~~----a~~~~~ls~~~v~~~-~~n~~~~~~~~ 237 (257)
+ ..+-..+.. +....+++..+++++ +.|+++..+++
T Consensus 341 ~~~k~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~ 395 (473)
T 3e74_A 341 PEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ 395 (473)
T ss_dssp TTTTCSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTCT
T ss_pred HHHcccChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC
Confidence 1 112122222 223468999999998 58999999886
No 83
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=97.08 E-value=0.034 Score=46.98 Aligned_cols=141 Identities=11% Similarity=0.019 Sum_probs=80.3
Q ss_pred CceEEEeccCCCCCCChhcHHHHHHHHHHc-CCceeeecCCCCCH---hhHHHHHhcCC-cEEeecc--cc-cHHHHHHH
Q 025169 82 LGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNK---EEIQSMLDFLP-QRIGHAC--CF-EEEEWRKL 153 (257)
Q Consensus 82 ~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~-gl~v~~Ha~E~~~~---~~i~~~l~lg~-~ri~Hg~--~l-~~~~~~~l 153 (257)
.+++|++..|.... ..+.|.+.++.|.++ |+++.+|++...+. ..+...++-.+ .++.|+. .. ..+.++++
T Consensus 114 ~g~~gi~~~g~~~~-~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p~l~iv~~H~G~~~~~~~~~~~ 192 (272)
T 3cjp_A 114 NKLVGIGELTPASG-QIKSLKPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELA 192 (272)
T ss_dssp TTCSEEEEECCCTT-CGGGGHHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHH
T ss_pred cCceEEEecCCCCC-ccHHHHHHHHHHHhccCCcEEEeCCCCCccccHHHHHHHHHHCCCceEEEECCCCccHHHHHHHH
Confidence 45677765543222 456899999999999 99999999753222 23333443223 3455432 22 22344545
Q ss_pred hc-CCCcEEecccccceeccccCCCcccHHHHHh-cCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHH-HHH
Q 025169 154 KS-SKIPVEICLTSNIRTETISSLDIHHFVDLYK-AQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLA-KSA 230 (257)
Q Consensus 154 ~~-~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~-~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~ 230 (257)
++ .|+.+.++.... ...+..+++ .|=++-+|||.|-.. .......+ ...+++.+++.++. .|+
T Consensus 193 ~~~~~~y~~~s~~~~----------~~~~~~~~~~~~dril~gSD~P~~~---~~~~~~~~-~~~~l~~~~~~~i~~~Na 258 (272)
T 3cjp_A 193 KEIQNLYLDTSAYFS----------TFVLKIVINELPLKCIFGTDMPFGD---LQLSIEAI-KKMSNDSYVANAVLGDNI 258 (272)
T ss_dssp HHCTTEEEECTTCSC----------HHHHHHHHHHSTTTEECCCCTTSSC---HHHHHHHH-HHHCSSHHHHHHHHTHHH
T ss_pred HhCCCEEEEeccccc----------HHHHHHHHHhCCCeEEEeCCCCCCC---hHHHHHHH-HhcCCCHHHHHHHHHHHH
Confidence 44 344444332111 112444443 356899999998532 22222222 33689999998875 788
Q ss_pred HHHcCCC
Q 025169 231 VKFIFAN 237 (257)
Q Consensus 231 ~~~~~~~ 237 (257)
.+...++
T Consensus 259 ~rl~~l~ 265 (272)
T 3cjp_A 259 SRLLNIE 265 (272)
T ss_dssp HHHHTC-
T ss_pred HHHhCcc
Confidence 8876654
No 84
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=97.00 E-value=0.0085 Score=51.03 Aligned_cols=128 Identities=15% Similarity=0.093 Sum_probs=88.0
Q ss_pred hcHHHHHHHHHHcCCcee-eecCCCCCHhhHHHHHh-cCC--cEEeecccccHHHHHHHhcCCCcEEecccccceecccc
Q 025169 99 TTFLPALKFAREQGLQIT-LHCGEIPNKEEIQSMLD-FLP--QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETIS 174 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~-~Ha~E~~~~~~i~~~l~-lg~--~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~ 174 (257)
+.|++.+++|++.|+|+. +|+.+. .+.+.+.++ .+. ..+-||..-+.+.++.+.+.|..+.+.+... ..
T Consensus 104 ~~F~~ql~lA~e~~lPviSiH~r~a--~~~~~~il~~~~~~~~~v~H~fsG~~e~a~~~l~~G~yis~~g~~~---~~-- 176 (254)
T 3gg7_A 104 AVFQHILRRCEDHGGRILSIHSRRA--ESEVLNCLEANPRSGTPILHWYSGSVTELRRAISLGCWFSVGPTMV---RT-- 176 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTC--HHHHHHHHHHCGGGEEEEEETCCSCHHHHHHHHHTTCEEEECHHHH---TS--
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCc--HHHHHHHHHHcCCCCcEEEEeCCCCHHHHHHHHcCCcEEEECcccC---ch--
Confidence 457888999999999997 999754 445555553 332 3377998778888898889999888776433 11
Q ss_pred CCCcccHHHHHhc-C-CCEEecCCCCCCC------C-CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCC
Q 025169 175 SLDIHHFVDLYKA-Q-HPLVLCTDDSGVF------S-TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFAN 237 (257)
Q Consensus 175 ~~~~~pi~~l~~~-G-v~v~lgTD~~~~~------~-~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~ 237 (257)
..++++.+. + =++-+.||.|-.. . ..+..-+..++...|++.+++.+.+ .|+.+...++
T Consensus 177 ----~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~~~iA~~~g~~~ee~~~~~~~N~~~lf~~~ 245 (254)
T 3gg7_A 177 ----QKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLSKIWQIPASEVERIVKENVSRLLGTV 245 (254)
T ss_dssp ----HHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHC-
T ss_pred ----HHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHCCC
Confidence 124555544 2 2589999997421 1 3455556677777899999998875 6777665544
No 85
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=96.60 E-value=0.01 Score=49.04 Aligned_cols=130 Identities=6% Similarity=-0.032 Sum_probs=82.6
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccc------cHHHHHHHhcCCCcEEeccccccee
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF------EEEEWRKLKSSKIPVEICLTSNIRT 170 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l------~~~~~~~l~~~~i~v~~cP~SN~~l 170 (257)
+++.+.+.....+ +.+ +.+|-+ +......+++-.+|.|+|--.. +.+.++..+++|+.+|+|-.+-...
T Consensus 63 ~~~~l~~~~~~~r-~di-~~v~~~---~~~~n~~a~~~~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~ 137 (212)
T 1v77_A 63 KPSLVRDTVQKFK-SYL-IYVESN---DLRVIRYSIEKGVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYS 137 (212)
T ss_dssp CHHHHHHHHHHCS-SSE-EEEECS---CHHHHHHHHHTTCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHS
T ss_pred CHHHHHHHHHhcC-cEE-EEEEeC---CHHHHHHHHhCCCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcC
Confidence 4455666555444 565 467753 2444455665578999996433 6788999999999999987662211
Q ss_pred cc-ccCCCccc----HHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHH
Q 025169 171 ET-ISSLDIHH----FVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQL-AKSAV 231 (257)
Q Consensus 171 ~~-~~~~~~~p----i~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~ 231 (257)
.. ...-...| +....+.|+||.+|||.-..+..--+++...++..+|++.+++... +.|+-
T Consensus 138 ~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~~G~~~e~~~~~l~~~~~ 204 (212)
T 1v77_A 138 NPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVIGMEIPQAKASISMYPE 204 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHTTCCHHHHHHTTTHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 10 00000122 2334567999999999866666444566666667799999998885 34543
No 86
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.42 E-value=0.14 Score=43.91 Aligned_cols=146 Identities=12% Similarity=0.163 Sum_probs=83.7
Q ss_pred ceEEEeccC----CCCCCChhcHHHHHHHHHHcCCceeeecCCCCC-------HhhHHHHHhcCC--c-EEeeccccc-H
Q 025169 83 GVVGIDLSG----NPTKGEWTTFLPALKFAREQGLQITLHCGEIPN-------KEEIQSMLDFLP--Q-RIGHACCFE-E 147 (257)
Q Consensus 83 ~vvg~~l~g----~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~-------~~~i~~~l~lg~--~-ri~Hg~~l~-~ 147 (257)
+++|+.+.. .........|.+.++.|.++|++|.+|.+...+ +..+...++--+ . .+.||-... +
T Consensus 118 g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~~~~~p~~~~~v~~~~P~l~ivl~H~G~~~~~ 197 (291)
T 3irs_A 118 GIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDFPDLTVVSSHGNWPWVQ 197 (291)
T ss_dssp TCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHCTTCCEEEEGGGTTCHH
T ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCCCCCccCCHHHHHHHHHHCCCCEEEeecCCcccHH
Confidence 466666541 122223467999999999999999999987532 234444444223 3 368976432 3
Q ss_pred HHHHHHhc-CCCcEEecccccceeccccCCCcccHHHHHh-cCC-CEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHH
Q 025169 148 EEWRKLKS-SKIPVEICLTSNIRTETISSLDIHHFVDLYK-AQH-PLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMF 224 (257)
Q Consensus 148 ~~~~~l~~-~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~-~Gv-~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~ 224 (257)
+.++++.+ .++.+. + |..... .+ ...++.++++ .|. +|-+|||-|-. +....+..+.. .+++.++..
T Consensus 198 ~~~~l~~~~~nvy~~--~-Sg~~~~-~~--~~~~~~~~~~~~g~drllfgSD~P~~---~~~~~~~~~~~-l~l~~e~~~ 267 (291)
T 3irs_A 198 EIIHVAFRRPNLYLS--P-DMYLYN-LP--GHADFIQAANSFLADRMLFGTAYPMC---PLKEYTEWFLT-LPIKPDAME 267 (291)
T ss_dssp HHHHHHHHCTTEEEE--C-GGGGSS-ST--THHHHHHHHTTGGGGTBCCCCCBTSS---CHHHHHHHHHT-SSCCHHHHH
T ss_pred HHHHHHhHCCCeEec--H-HHHhcc-CC--CHHHHHHHHHHhCcceEEEecCCCCC---CHHHHHHHHHH-CCCCHHHHH
Confidence 44554422 344332 2 222110 11 1124545444 243 68999998754 33334444433 589999998
Q ss_pred HHH-HHHHHHcCCCh
Q 025169 225 QLA-KSAVKFIFANG 238 (257)
Q Consensus 225 ~~~-~n~~~~~~~~~ 238 (257)
++. .|+.+...++.
T Consensus 268 ~i~~~NA~rl~~~~~ 282 (291)
T 3irs_A 268 KILHGNAERLLAQAG 282 (291)
T ss_dssp HHHTHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCccc
Confidence 885 78887765544
No 87
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=96.36 E-value=0.033 Score=49.12 Aligned_cols=126 Identities=13% Similarity=0.146 Sum_probs=87.9
Q ss_pred hcHHHHHHHHHH-cCCceeeecCCCCCHhhHHHHHh-cCC---cEEeecccccHHHHHHHhcCCCcEEecccccceeccc
Q 025169 99 TTFLPALKFARE-QGLQITLHCGEIPNKEEIQSMLD-FLP---QRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETI 173 (257)
Q Consensus 99 ~~~~~~~~~A~~-~gl~v~~Ha~E~~~~~~i~~~l~-lg~---~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~ 173 (257)
+.|++-+++|++ .++|+.+|+-+. .+.+.+.++ .+. ..+-||+.=+.++++.+.+.|..+.+.+.+ ++ .
T Consensus 154 ~~F~~ql~lA~e~~~lPviiH~r~A--~~d~l~iL~~~~~~~~~gViH~FsGs~e~a~~~l~lG~yis~~G~~-~k--~- 227 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPFFFHCRKS--WSDLCQLNKELGYNGCKGVVHCFDGTEEEMNQILNEGWDIGVTGNS-LQ--S- 227 (325)
T ss_dssp HHHHHTHHHHHHCTTCCEEEEEESC--HHHHHHHHHHTTCTTSCEEECSCCCCHHHHHHHHHTTCEEEECSGG-GS--S-
T ss_pred HHHHHHHHHHHHhhCCeEEEEeCch--HHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHhcCcEEeeCccc-cC--c-
Confidence 457788899999 999999999754 445555554 332 357899888999999999999988887742 11 1
Q ss_pred cCCCcccHHHHHhcCCC---EEecCCCCCCC--------------------------------C--CChHHHHHHHHHhC
Q 025169 174 SSLDIHHFVDLYKAQHP---LVLCTDDSGVF--------------------------------S--TSVSREYDLAASAF 216 (257)
Q Consensus 174 ~~~~~~pi~~l~~~Gv~---v~lgTD~~~~~--------------------------------~--~~l~~E~~~a~~~~ 216 (257)
....++.+ -+| +-|-||.|-+. | ..+..-+..++...
T Consensus 228 -----~~~~~~v~-~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~~~iA~l~ 301 (325)
T 3ipw_A 228 -----IELLNVMK-QIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMSSIK 301 (325)
T ss_dssp -----HHHHHHHT-TSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHHHHHHHHH
T ss_pred -----HHHHHHHH-hCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHHHHHHHhh
Confidence 11224333 344 89999987431 1 24556677777778
Q ss_pred CCCHHHHHHHH-HHHHHHcCC
Q 025169 217 SLGRREMFQLA-KSAVKFIFA 236 (257)
Q Consensus 217 ~ls~~~v~~~~-~n~~~~~~~ 236 (257)
|++.+++.+.+ .|+.+.-+.
T Consensus 302 g~~~eeva~~t~~Na~~lF~~ 322 (325)
T 3ipw_A 302 HISLFEFVNKVYSNSMNMYFP 322 (325)
T ss_dssp TCCHHHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHHHHHHHHHhCc
Confidence 99999999875 677766554
No 88
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=96.36 E-value=0.072 Score=45.17 Aligned_cols=155 Identities=16% Similarity=0.087 Sum_probs=85.7
Q ss_pred ceEEEeccCCC---CCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCc-EEeeccccc---------HH
Q 025169 83 GVVGIDLSGNP---TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ-RIGHACCFE---------EE 148 (257)
Q Consensus 83 ~vvg~~l~g~~---~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~-ri~Hg~~l~---------~~ 148 (257)
+++|+.+.... .....+.|.+.++.|.++|++|.+|++.. ....+...++ +... .+.|+-... -+
T Consensus 105 g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~-~~~~~~~~~~~~pl~~vi~H~g~~~~~~~~~~~~~~ 183 (288)
T 2ffi_A 105 GVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA-DIPVLVRALQPYGLDIVIDHFGRPDARRGLGQPGFA 183 (288)
T ss_dssp TCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT-THHHHHHHHTTTTCCEEESGGGSCCTTSCTTCTTHH
T ss_pred CCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh-hHHHHHHHHHHCCCCEEEECCCCCCCCCCCCChhHH
Confidence 57777654321 12233679999999999999999999754 2334444443 3422 247986543 23
Q ss_pred HHHHHhcC-CCcEEecccccceeccccCCC-c-ccHHHHHhc-CC-CEEecCCCCCCCC---CChHHHHHHHHHhCCCCH
Q 025169 149 EWRKLKSS-KIPVEICLTSNIRTETISSLD-I-HHFVDLYKA-QH-PLVLCTDDSGVFS---TSVSREYDLAASAFSLGR 220 (257)
Q Consensus 149 ~~~~l~~~-~i~v~~cP~SN~~l~~~~~~~-~-~pi~~l~~~-Gv-~v~lgTD~~~~~~---~~l~~E~~~a~~~~~ls~ 220 (257)
.+..+.+. ++.+.++......-....++. . ..+..+++. |. ++-+|||-|-... .+....+..+.. .+++.
T Consensus 184 ~~~~l~~~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~~~~-~~~~~ 262 (288)
T 2ffi_A 184 ELLTLSGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQFEA-LGCSA 262 (288)
T ss_dssp HHTTCCCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHHHHH-HCCCH
T ss_pred HHHHHHhCCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHHHHH-HCCCH
Confidence 33333332 444333221100000000000 0 125566665 64 7999999886542 344333344433 45688
Q ss_pred HHHHHHH-HHHHHHcCCChH
Q 025169 221 REMFQLA-KSAVKFIFANGR 239 (257)
Q Consensus 221 ~~v~~~~-~n~~~~~~~~~~ 239 (257)
+++.++. .|+.+...++.+
T Consensus 263 ~~~~~i~~~NA~rl~~l~~~ 282 (288)
T 2ffi_A 263 QLRQALLLDTARALFGFELE 282 (288)
T ss_dssp HHHHHHHTHHHHHHTTCCCC
T ss_pred HHHHHHHHHCHHHHhCcccc
Confidence 8888875 899888777654
No 89
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=96.31 E-value=0.013 Score=50.18 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=87.0
Q ss_pred hhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceecc-----
Q 025169 98 WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTET----- 172 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~----- 172 (257)
..........+.+.+.....|.. ...........+.....+.............+.+.....++........
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (426)
T 3mkv_A 214 EDEIRAIVAEAQGRGTYVLAHAY---TPAAIARAVRCGVRTIEHGNLIDDETARLVAEHGAYVVPTLVTYDALASEGEKY 290 (426)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEC---SHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHTCEEECCHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhcccceeehhh---hhhhHHHHHhhccccccccccccchhhhhhhhcCccccccccchhhhhhhhhhc
Confidence 34455556666677777777663 2334444555666666666655555555555556655555443221100
Q ss_pred ------------ccCCCcccHHHHHhcCCCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 173 ------------ISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 173 ------------~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
....+..+...+...|+++.+|||.++........++..+. .++|+.|++++ |.|++++.++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~d~~~~~~~~~~~~~~~~~--~gls~~eal~~~T~~pA~~lgl~~ 367 (426)
T 3mkv_A 291 GLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRLQSDEFRILA--EVLSPAEVIASATIVSAEVLGMQD 367 (426)
T ss_dssp TCCHHHHTTHHHHHTTHHHHHHHHHHHTCCBCCCCCCCGGGGGGTTHHHHHHH--TTSCHHHHHHHTTHHHHHHTTCBT
T ss_pred cccccccccccccccccchhhHHhhhcCceeeeccCCcccccchHHHHHHHHH--hCCCHHHHHHHHHHHHHHHhCCCC
Confidence 00123456788999999999999987765555556665554 58999999998 689999999876
No 90
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=95.84 E-value=0.22 Score=45.75 Aligned_cols=174 Identities=10% Similarity=0.037 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecc--CCCC-CCChhcHHHHHHHHHHcCCceeeecCCCCC--HhhHHHHHh----cC
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLS--GNPT-KGEWTTFLPALKFAREQGLQITLHCGEIPN--KEEIQSMLD----FL 135 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~--g~~~-~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~--~~~i~~~l~----lg 135 (257)
..++..+..++..+....+.+|+... ..+. ..+.+++.++++.++++|.++.+|+..... .+.+.+++. .|
T Consensus 162 ~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~a~~e~i~la~~~g 241 (480)
T 3gip_A 162 TAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAIGRGTG 241 (480)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSSTTHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccccHHHHHHHHHHHHHHhC
Confidence 34444444444332222345555433 2211 235678888899999999999999853221 133444444 35
Q ss_pred Cc-EEeecccc-------cHH---HHHHHhcCCCcE--Eecccccceecc-c-----------------cCC--------
Q 025169 136 PQ-RIGHACCF-------EEE---EWRKLKSSKIPV--EICLTSNIRTET-I-----------------SSL-------- 176 (257)
Q Consensus 136 ~~-ri~Hg~~l-------~~~---~~~~l~~~~i~v--~~cP~SN~~l~~-~-----------------~~~-------- 176 (257)
+. .+.|.... +++ .++..+++|+.+ ++||.....+.. + +++
T Consensus 242 ~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~i 321 (480)
T 3gip_A 242 CATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADI 321 (480)
T ss_dssp CEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHH
T ss_pred CCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHH
Confidence 43 35565421 133 455556777554 567755433210 0 111
Q ss_pred ----CcccHH--------------------HHHhcCCCEEecCCCCCCCCCC---hHHHHHHHHH-----hCCCCHHHHH
Q 025169 177 ----DIHHFV--------------------DLYKAQHPLVLCTDDSGVFSTS---VSREYDLAAS-----AFSLGRREMF 224 (257)
Q Consensus 177 ----~~~pi~--------------------~l~~~Gv~v~lgTD~~~~~~~~---l~~E~~~a~~-----~~~ls~~~v~ 224 (257)
+..|.. ..+..+-...+|||+....+.. +..-+-.... ..+++.++++
T Consensus 322 a~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 401 (480)
T 3gip_A 322 AARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMVGSDGLPNDARPHPRLWGSFTRVLGRYVREARLMTLEQAV 401 (480)
T ss_dssp HHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHHHHHHHHCCCCCTCSSCHHHHH
T ss_pred HHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCCCeEEecCCcccCCCCChhhhhhHHHHHHHHhhhcCCCCHHHHH
Confidence 012221 2233455688999986543321 2222222222 1248999998
Q ss_pred HH-HHHHHHHcCCCh
Q 025169 225 QL-AKSAVKFIFANG 238 (257)
Q Consensus 225 ~~-~~n~~~~~~~~~ 238 (257)
++ +.|+++..++++
T Consensus 402 ~~~t~~~a~~~g~~~ 416 (480)
T 3gip_A 402 ARMTALPARVFGFAE 416 (480)
T ss_dssp HHHTHHHHHHHTCTT
T ss_pred HHHHHHHHHHcCCCC
Confidence 87 589999998854
No 91
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=95.72 E-value=0.069 Score=45.61 Aligned_cols=164 Identities=14% Similarity=0.053 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCC--CCCChhcHHHHHHHHHHcCCceeeecCCCCCH---------h-------
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNP--TKGEWTTFLPALKFAREQGLQITLHCGEIPNK---------E------- 126 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~--~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~---------~------- 126 (257)
+++.+.+.++.+.+ ..+++|+-+..+. .....+.|.+.++.|.++|++|.+|.+..... .
T Consensus 101 ~~~~~~~el~~~~~--~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
T 2f6k_A 101 YELDAVKTVQQALD--QDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFM 178 (307)
T ss_dssp CHHHHHHHHHHHHH--TSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHh--ccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchH
Confidence 34544444444332 2245555433211 11223679999999999999999999865421 0
Q ss_pred -hHH--------HHHhcCC--c-EEeecccccHHHHHHHh------cCCCcEEecccccceeccccCC-CcccHHHHHhc
Q 025169 127 -EIQ--------SMLDFLP--Q-RIGHACCFEEEEWRKLK------SSKIPVEICLTSNIRTETISSL-DIHHFVDLYKA 187 (257)
Q Consensus 127 -~i~--------~~l~lg~--~-ri~Hg~~l~~~~~~~l~------~~~i~v~~cP~SN~~l~~~~~~-~~~pi~~l~~~ 187 (257)
... ..++--+ . .+.|+-..-|.....+. .........| |++++. +.. ....+..+++.
T Consensus 179 ~~~~~~~~l~~~~~~~~~P~l~~v~~H~gg~~p~~~~~~~~~~~~~~~~~~~~~~~--n~y~~~-s~~~~~~~l~~~~~~ 255 (307)
T 2f6k_A 179 DTTMTFINMLKYHFFEKYPNIKVIIPHAGAFLGIVDDRIAQYAQKVYQVDVYDVMH--HVYFDV-AGAVLPRQLPTLMSL 255 (307)
T ss_dssp HHHHHHHHHHHTTHHHHCTTCEEEESGGGTTHHHHHHHHHHHHHHHHCCCHHHHHH--HSEEEC-CSSCTTTHHHHHTTT
T ss_pred HHHHHHHHHHhcCccccCCCCeEEccCCCccchhhHHHHHhhccccCcccHHHHHh--heEEec-cCCCCHHHHHHHHHh
Confidence 000 1222122 2 36787432122222110 0011111222 433321 000 11236666665
Q ss_pred -CC-CEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHH-HHHHHH
Q 025169 188 -QH-PLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLA-KSAVKF 233 (257)
Q Consensus 188 -Gv-~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~ 233 (257)
|. +|-+|||.|-........-+..+....+++.+++.++. .|+.+.
T Consensus 256 ~g~drll~gSD~P~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~Na~rl 304 (307)
T 2f6k_A 256 AQPEHLLYGSDIPYTPLDGSRQLGHALATTDLLTNEQKQAIFYDNAHRL 304 (307)
T ss_dssp SCGGGEECCCCTTTSCHHHHHHHHHHHHHCTTSCHHHHHHHHTHHHHHH
T ss_pred cCcccEEEecCCCCCCchhHHHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 43 79999999854322111212222222388988888875 777654
No 92
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=95.41 E-value=0.64 Score=39.80 Aligned_cols=184 Identities=14% Similarity=0.174 Sum_probs=91.2
Q ss_pred ccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCC--------CCCChhcHHHHHHHHHHcCCceeee
Q 025169 47 TRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNP--------TKGEWTTFLPALKFAREQGLQITLH 118 (257)
Q Consensus 47 ~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~--------~~~~~~~~~~~~~~A~~~gl~v~~H 118 (257)
+++.+-|.....++. ...++.+.+.++.+.+ ..+++|+.+..+. .....+.|.+.++.|.++|++|.+|
T Consensus 88 ~~~~p~r~~~~~~v~-p~~~~~~~~el~~~~~--~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 164 (327)
T 2dvt_A 88 CAKRPDRFLAFAALP-LQDPDAATEELQRCVN--DLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLH 164 (327)
T ss_dssp HHHCTTTEEEEECCC-TTSHHHHHHHHHHHHH--TTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEE
T ss_pred HhhCCCceEEEeecC-cCCHHHHHHHHHHHHh--cCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEEC
Confidence 344443443333333 2345544444444332 2245555443221 1223467999999999999999999
Q ss_pred cCCCCCHh-------------------h-HH--------HHHhcCC--c-EEeecccccHHHHHHHhc--------CCCc
Q 025169 119 CGEIPNKE-------------------E-IQ--------SMLDFLP--Q-RIGHACCFEEEEWRKLKS--------SKIP 159 (257)
Q Consensus 119 a~E~~~~~-------------------~-i~--------~~l~lg~--~-ri~Hg~~l~~~~~~~l~~--------~~i~ 159 (257)
.+...... + .. ..++--+ . .+.|+-..-|..+..+.. ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~P~l~~v~~H~gg~~p~~~~~~~~~~~~~~~~~~~~ 244 (327)
T 2dvt_A 165 PRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLNIILGHMGEGLPYMMWRIDHRNAWVKLPPRYP 244 (327)
T ss_dssp CCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGGTTHHHHHHHHHHTTTTCCSCCSSS
T ss_pred CCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHhhCCCCeEEEecccccHHHHHHHHHhhhhhccccccCC
Confidence 97543210 0 00 1222122 2 368974322333222221 0000
Q ss_pred EEecc----cccceeccccCCCcccHHHHHhc-C-CCEEecCCCCCCCCCChHHHHHHHHHhCCCCHHHHHHHH-HHHHH
Q 025169 160 VEICL----TSNIRTETISSLDIHHFVDLYKA-Q-HPLVLCTDDSGVFSTSVSREYDLAASAFSLGRREMFQLA-KSAVK 232 (257)
Q Consensus 160 v~~cP----~SN~~l~~~~~~~~~pi~~l~~~-G-v~v~lgTD~~~~~~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~ 232 (257)
+.-.| ..|+++..-..+....+..+++. | =+|-+|||-|-. +.......+.. .+++.+++.++. .|+.+
T Consensus 245 ~~~~~~~~~~~n~y~~~sg~~~~~~~~~~~~~~g~dril~gSD~P~~---~~~~~~~~~~~-~~l~~~~~~~i~~~Na~r 320 (327)
T 2dvt_A 245 AKRRFMDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFE---NIDHASDWFNA-TSIAEADRVKIGRTNARR 320 (327)
T ss_dssp CSSCHHHHHHHHEEEECTTCCCHHHHHHHHTTTCGGGEECCCCTTTS---CHHHHHHHHHH-SSSCHHHHHHHHTHHHHH
T ss_pred CCCCHHHHHhhcEEEeccCCCCHHHHHHHHHHhCcccEEEecCCCCc---cHHHHHHHHHH-CCCCHHHHHHHHHHhHHH
Confidence 00001 12444332100112235666654 4 379999998842 33333333333 589999998885 78888
Q ss_pred HcCCC
Q 025169 233 FIFAN 237 (257)
Q Consensus 233 ~~~~~ 237 (257)
...++
T Consensus 321 l~~l~ 325 (327)
T 2dvt_A 321 LFKLD 325 (327)
T ss_dssp HTTCC
T ss_pred HhCCC
Confidence 76654
No 93
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=95.01 E-value=0.89 Score=40.74 Aligned_cols=195 Identities=17% Similarity=0.076 Sum_probs=102.5
Q ss_pred hhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhh---CCCceEEEeccCCC------------CC--CChh
Q 025169 37 TKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEM---RDLGVVGIDLSGNP------------TK--GEWT 99 (257)
Q Consensus 37 ~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~---~~~~vvg~~l~g~~------------~~--~~~~ 99 (257)
.+.++...++....|+...+-..+.. +++...+.++...++ ....+.|+.+-|+- +- .+++
T Consensus 77 ~e~l~~~~~a~~~~GvTt~l~t~~T~--~~e~l~~al~~~~~~~~~~~~~ilGiHlEGPfis~~~~Ga~~~~~i~~p~~~ 154 (381)
T 3iv8_A 77 AETIDTMHKANLKSGCTSFLPTLITS--SDENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVMKKGIHSVDFIRPSDDT 154 (381)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEESC--CHHHHHHHHHHHHHHHHHCSSSBCCEEEECSSCCGGGCTTSCTTTCCCCCHH
T ss_pred HHHHHHHHHHHHhCCccccccccCCC--CHHHHHHHHHHHHHHHhcCCCceeEeeccCcccCHhhcCCCCHHHcCCCCHH
Confidence 45677777777788988877755543 566555555444333 22347777764421 01 1235
Q ss_pred cHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCC-cEEeecccccHHHHHHHhcCCCcE-Eecccccce--------
Q 025169 100 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP-QRIGHACCFEEEEWRKLKSSKIPV-EICLTSNIR-------- 169 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~-~ri~Hg~~l~~~~~~~l~~~~i~v-~~cP~SN~~-------- 169 (257)
++++..+.+ .++++...+.|..+.+-++.+.+.|. -.++|-.. +-++.....+.|+.. +|.- |..
T Consensus 155 ~~~~~~~~~--~~i~~vTlAPE~~~~~~i~~l~~~gi~vs~GHs~A-~~e~~~~a~~~Ga~~~THlf--NaM~~~~hR~P 229 (381)
T 3iv8_A 155 MIDTICANS--DVIAKVTLAPENNKPEHIEKLVKAGIVVSIGHTNA-TYSEARKSFESGITFATHLF--NAMTPMVGREP 229 (381)
T ss_dssp HHHHHHHTT--TSEEEEEECCTTSCHHHHHHHHHTTCEEEECSBCC-CHHHHHHHHHTTCCEESSTT--SSBCCCBTTBC
T ss_pred HHHHHHhcc--CCeEEEEECCCCCcHHHHHHHHHCCCEEEecCCCC-CHHHHHHHHHcCCCEeeeCC--CCCCCccCCCC
Confidence 555554432 25777778888765433333333444 24555432 223333333334332 2210 100
Q ss_pred -------------eccc-cCCCccc--HHHHHh-cCCCEEecCC------------------------------CCCCCC
Q 025169 170 -------------TETI-SSLDIHH--FVDLYK-AQHPLVLCTD------------------------------DSGVFS 202 (257)
Q Consensus 170 -------------l~~~-~~~~~~p--i~~l~~-~Gv~v~lgTD------------------------------~~~~~~ 202 (257)
...+ +..-.|| ++-+++ +|-++.+-|| +....+
T Consensus 230 G~vga~l~~~~~~~elI~DG~Hv~p~~~~~~~~~~g~~~~lvTDam~a~G~~dg~y~lgg~~v~v~~g~~~l~~g~lAGs 309 (381)
T 3iv8_A 230 GVVGAIYDTPEVYAGIIADGFHVDYANIRIAHKIKGEKLVLVTDATAPAGAEMDYFIFVGKKVYYRDGKCVDENGTLGGS 309 (381)
T ss_dssp HHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHGGGEEEECCBCTTTTSCCSEEESSSCEEEEETTEEECTTCCBCSB
T ss_pred chHHHHhcCCCcEEEEEcCCccCCHHHHHHHHHhcCCEEEEEeCcccccCCCCCeeecCCeEEEEECCEEEcCCCCccCh
Confidence 0000 0111223 111111 2233444444 222222
Q ss_pred -CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCCh
Q 025169 203 -TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 203 -~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~ 238 (257)
.+|.++++.+.+..+++..++++++ .|++++.++++
T Consensus 310 ~l~l~~~v~~~v~~~g~~~~~al~~aT~~pA~~lg~~~ 347 (381)
T 3iv8_A 310 ALTMIEAVQNTVEHVGIALDEALRMATLYPAKAIGVDE 347 (381)
T ss_dssp CCCHHHHHHHHHHTTCCCHHHHHHHHTHHHHHHHTCTT
T ss_pred hhhHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhCCCC
Confidence 5899999999987899999999985 89999999865
No 94
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=94.76 E-value=0.12 Score=45.63 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=79.3
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCH------hh--HHHHH----h--cCCcEEeecccc-cHHHHHHHhcCC--Cc
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNK------EE--IQSML----D--FLPQRIGHACCF-EEEEWRKLKSSK--IP 159 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~------~~--i~~~l----~--lg~~ri~Hg~~l-~~~~~~~l~~~~--i~ 159 (257)
+.+.+.++++.+++.|+++.+|+....+. +. +...+ . .|.. .|-+++ +.+.++++++.+ |.
T Consensus 118 ~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la~~~~~~--~hi~Hvst~~~~~~i~~ak~~Vt 195 (347)
T 2z26_A 118 SVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALK--VVFEHITTKDAADYVRDGNERLA 195 (347)
T ss_dssp CGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHHHSTTCC--EEECSCCSHHHHHHHHTSCTTEE
T ss_pred CHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHHhhcCCc--EEEEECCcHHHHHHHHHhCCCce
Confidence 45789999999999999999999754311 11 22212 1 1322 366665 567788887654 66
Q ss_pred EEecccccce-------------eccccCCCcc----cHHHHHhcCCC-EEecCCCCCC--------------CC-CChH
Q 025169 160 VEICLTSNIR-------------TETISSLDIH----HFVDLYKAQHP-LVLCTDDSGV--------------FS-TSVS 206 (257)
Q Consensus 160 v~~cP~SN~~-------------l~~~~~~~~~----pi~~l~~~Gv~-v~lgTD~~~~--------------~~-~~l~ 206 (257)
.++||--=.. ...-|+++.. -+.+.+..|.. +.|+||-... ++ ..++
T Consensus 196 ~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~~~g~~Gi~~~e~~l 275 (347)
T 2z26_A 196 ATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL 275 (347)
T ss_dssp EEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSSSSBCCCCCCTTTHH
T ss_pred EeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcCCCCCCCcCcHHHHH
Confidence 6778753111 0111122111 13444556644 3899996221 11 1222
Q ss_pred HHHHHHHHhCCCCHHHHHHH-HHHHHHHcCCC
Q 025169 207 REYDLAASAFSLGRREMFQL-AKSAVKFIFAN 237 (257)
Q Consensus 207 ~E~~~a~~~~~ls~~~v~~~-~~n~~~~~~~~ 237 (257)
.-+..+.. .+++.+++.++ +.|.++..+++
T Consensus 276 ~l~~~~~~-~~~sl~~~v~~~s~nPAki~gl~ 306 (347)
T 2z26_A 276 GSYATVFE-EMNALQHFEAFCSVNGPQFYGLP 306 (347)
T ss_dssp HHHHHHHH-HTTCGGGHHHHHHTHHHHHHTCC
T ss_pred HHHHHHhh-cCCCHHHHHHHHhHhHHHHhCCC
Confidence 33332222 37899999886 68999998885
No 95
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=94.42 E-value=0.58 Score=40.38 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=68.3
Q ss_pred CCCchhhhhh---HhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHH
Q 025169 33 RPVNTKNMND---ACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAR 109 (257)
Q Consensus 33 ~~~~~~~~~~---~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~ 109 (257)
|.|.+|.++. +++.+++.|+++.+.....-..+++...+.++.+.+...+.+.=.|..| ..+|..+.++++..+
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G---~~~P~~v~~lv~~l~ 189 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVG---YTNPTEFGQLFQDLR 189 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSS---CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC---CCCHHHHHHHHHHHH
Confidence 5677777654 4466778898887655422225778778888777776554332223333 347788888888776
Q ss_pred Hc-C----CceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 110 EQ-G----LQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 110 ~~-g----l~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+. + +++.+|+.-+.+- .+...+++.|++++.
T Consensus 190 ~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd 227 (293)
T 3ewb_X 190 REIKQFDDIIFASHCHDDLGMATANALAAIENGARRVE 227 (293)
T ss_dssp HHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEE
Confidence 63 2 6788888766543 355677888998763
No 96
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=94.36 E-value=0.064 Score=45.71 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=72.7
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCC---HhhHHHHHh-cCCc----EEeecccccHHHHHHHhcCCCcEEec--ccccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPN---KEEIQSMLD-FLPQ----RIGHACCFEEEEWRKLKSSKIPVEIC--LTSNI 168 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~---~~~i~~~l~-lg~~----ri~Hg~~l~~~~~~~l~~~~i~v~~c--P~SN~ 168 (257)
+.|++.+++|++.|+|+.+|+....+ .+.+.+.++ .+.. .+.|| +.+.++.+.+.|..+.+. |.. +
T Consensus 110 ~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~---~~~~a~~~l~~G~yis~~~~pg~-~ 185 (261)
T 3guw_A 110 EVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV---NFETLDMVLETEYWIGLTVQPGK-L 185 (261)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC---CTTTHHHHHTSSSEEEEECC-----
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC---CHHHHHHHHhCCEEEEecCCCCc-c
Confidence 56888999999999999999965321 234444453 3432 35698 677888888899888765 321 1
Q ss_pred eeccccCCCcccHHHHHh-cC-CCEEecCCCCCCCC--CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCCh
Q 025169 169 RTETISSLDIHHFVDLYK-AQ-HPLVLCTDDSGVFS--TSVSREYDLAASAFSLGRREMFQLA-KSAVKFIFANG 238 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~l~~-~G-v~v~lgTD~~~~~~--~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~ 238 (257)
. + .. ..++.+ -+ =++-+.||.|-..+ ..+...+..++...|++. +.+.+ .|+.+...+++
T Consensus 186 t---~---~~--~~~~v~~ipldrlLlETD~P~~pn~P~~v~~~~~~la~~~g~~~--v~~~~~~Na~rlf~~~~ 250 (261)
T 3guw_A 186 S---A---ED--AARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREE--MEKVARENARKFLRVLE 250 (261)
T ss_dssp ---------C--CTTGGGGCC-CCEEEECCCCCC------CCCCTTHHHHHCTTGG--GGHHHHSSHHHHTTC--
T ss_pred c---H---HH--HHHHHHhCCcceEEEecCCCCCCCCHHHHHHHHHHHHhhCChhH--HHHHHHHHHHHHHCCCc
Confidence 0 0 00 112222 22 25899999975221 123333444445467775 66654 67777666544
No 97
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=94.34 E-value=0.35 Score=41.37 Aligned_cols=150 Identities=10% Similarity=0.066 Sum_probs=82.4
Q ss_pred ceEEEeccCC--C-CCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCc-EEeeccccc---------HH
Q 025169 83 GVVGIDLSGN--P-TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ-RIGHACCFE---------EE 148 (257)
Q Consensus 83 ~vvg~~l~g~--~-~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~-ri~Hg~~l~---------~~ 148 (257)
+++|+.+... . .....+.|.+.++.|+++|++|.+|++... ...+.+.+. +... .+.|+-... -+
T Consensus 118 gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~~-l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~ 196 (294)
T 4i6k_A 118 GIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPPKY-LVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQ 196 (294)
T ss_dssp TEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCHHH-HHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHH
T ss_pred CCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCcch-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHH
Confidence 6888776431 1 122346799999999999999999996321 123333333 3433 356765421 12
Q ss_pred HHHHHhcC-CCcEEecccccceeccccC---C-CcccHHHHHh-cCC-CEEecCCCCCCCC---CChHHHHHHHHHhCCC
Q 025169 149 EWRKLKSS-KIPVEICLTSNIRTETISS---L-DIHHFVDLYK-AQH-PLVLCTDDSGVFS---TSVSREYDLAASAFSL 218 (257)
Q Consensus 149 ~~~~l~~~-~i~v~~cP~SN~~l~~~~~---~-~~~pi~~l~~-~Gv-~v~lgTD~~~~~~---~~l~~E~~~a~~~~~l 218 (257)
.+..+++. |+.+.++ -.....-.. . ....+.++++ .|. ++-+|||-|-... .+....+..+.. .++
T Consensus 197 ~~~~l~~~~nv~~k~S---g~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~~~l~~-~~~ 272 (294)
T 4i6k_A 197 KFLSLLNVKQHWIKVS---GFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAIKAFKQ-IVF 272 (294)
T ss_dssp HHHHHCCTTTEEEECC---CGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHHHHHHH-HCC
T ss_pred HHHHHHhCCCEEEEec---ccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHHHHHHH-HCC
Confidence 33333433 5544432 111110000 0 0123555554 344 6999999886553 244443444444 468
Q ss_pred CHHHHHHHH-HHHHHHcCCC
Q 025169 219 GRREMFQLA-KSAVKFIFAN 237 (257)
Q Consensus 219 s~~~v~~~~-~n~~~~~~~~ 237 (257)
+.++..++. .|+.+...++
T Consensus 273 ~~~~~~~i~~~NA~rl~~l~ 292 (294)
T 4i6k_A 273 DKHEQCLILNQNPTELFGFS 292 (294)
T ss_dssp CHHHHHHHHTHHHHHHHTC-
T ss_pred CHHHHHHHHHHCHHHHhCCC
Confidence 999998875 7888876654
No 98
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=94.24 E-value=1.1 Score=38.85 Aligned_cols=163 Identities=14% Similarity=0.147 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEec--cCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh----h----------
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDL--SGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE----E---------- 127 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l--~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~----~---------- 127 (257)
..++.+.+.++.+... +++|+-+ .+.......+.+.++++.|.++|+++.+|.+...+.. .
T Consensus 124 ~~~~~a~~el~~~~~~---g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~p~ 200 (334)
T 2hbv_A 124 QDLDLACKEASRAVAA---GHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWDMMGGQRMKKWMLPWLVAMPA 200 (334)
T ss_dssp TSHHHHHHHHHHHHHH---TCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCSCSCTTTTCSTTHHHHTHHHH
T ss_pred cCHHHHHHHHHHHHHc---CCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCCCCCCcchhhhhhhhhhhcHH
Confidence 3455454444444432 3444333 2222222346799999999999999999998643210 0
Q ss_pred ----------HHHHHhcCCc----EEeecccccHHHHHHHh----c-----CC---CcEEecccccceeccccCCCcccH
Q 025169 128 ----------IQSMLDFLPQ----RIGHACCFEEEEWRKLK----S-----SK---IPVEICLTSNIRTETISSLDIHHF 181 (257)
Q Consensus 128 ----------i~~~l~lg~~----ri~Hg~~l~~~~~~~l~----~-----~~---i~v~~cP~SN~~l~~~~~~~~~pi 181 (257)
+...++--++ .+.|+-..-+..+.++. . .. .+....+ |++..+ ..+....+
T Consensus 201 ~~~~~~~~l~~~~v~~~~P~~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~y~ds-~~~~~~~l 277 (334)
T 2hbv_A 201 ETQLAILSLILSGAFERIPKSLKICFGHGGGSFAFLLGRVDNAWRHRDIVREDCPRPPSEYVD--RFFVDS-AVFNPGAL 277 (334)
T ss_dssp HHHHHHHHHHHTTGGGTSCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHTTCCSCGGGGGG--GCEEEC-CCSSHHHH
T ss_pred HHHHHHHHHHHcCchhhCCCcceEEeecccchHHHHHHHHHhhhhcccccccccCCCHHHHHh--hhEEEe-ccCCHHHH
Confidence 0011111222 26797432222222221 0 10 0111111 444432 11122235
Q ss_pred HHHHhc-CC-CEEecCCCCCCCCC-ChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCC
Q 025169 182 VDLYKA-QH-PLVLCTDDSGVFST-SVSREYDLAASAFSLGRREMFQLA-KSAVKFIFA 236 (257)
Q Consensus 182 ~~l~~~-Gv-~v~lgTD~~~~~~~-~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~ 236 (257)
..+++. |. +|-+|||-|-..+. +.. ..+ ...+++.++..++. .|+.+...+
T Consensus 278 ~~~~~~~g~drilfGSD~P~~~~~~~~~---~~l-~~~~l~~~~~~~i~~~NA~rl~~l 332 (334)
T 2hbv_A 278 ELLVSVMGEDRVMLGSDYPFPLGEQKIG---GLV-LSSNLGESAKDKIISGNASKFFNI 332 (334)
T ss_dssp HHHHHHHCGGGEECCCCBTSTTSCSSTT---HHH-HTSSCCHHHHHHHHTHHHHHHHTC
T ss_pred HHHHHHhCcccEEEeCCCCCCCCCcCHh---hHh-hhcCCCHHHHHHHHhHHHHHHhCC
Confidence 555544 53 79999999864332 221 222 34689999988875 788776544
No 99
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=94.20 E-value=1.1 Score=39.16 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=59.4
Q ss_pred cHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeecc---------cccHHHHHHHhcCCCcEEeccccc
Q 025169 100 TFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHAC---------CFEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg~---------~l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
.=+++++...+.|+.+-+ |++ +....+++++ .|-.+.|.. .++++.++.++++|-.+-+|-.+.
T Consensus 140 ~G~~vV~emnrlGmivDlSH~s----~~~~~dvl~~s~~Pvi~SHsn~~al~~h~RNl~De~irala~~GGvigv~~~~~ 215 (325)
T 2i5g_A 140 FGREIVAEMNRVGIMCDLSHVG----SKTSEEVILESKKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFVGVTMFAP 215 (325)
T ss_dssp HHHHHHHHHHHHTCEEECTTBC----HHHHHHHHHHCSSCCEEEEECBTTTCCCTTSBCHHHHHHHHHTTCEEEECCCGG
T ss_pred HHHHHHHHHHHcCcEEEcCcCC----HHHHHHHHHHhCCCEEEeCCCccccCCCCCCCCHHHHHHHHHcCCeEEEeecch
Confidence 457788888888988765 553 5566777775 445667763 457899999999998887776655
Q ss_pred ceeccccCCCcccHHHHHh--------cCC-CEEecCCC
Q 025169 168 IRTETISSLDIHHFVDLYK--------AQH-PLVLCTDD 197 (257)
Q Consensus 168 ~~l~~~~~~~~~pi~~l~~--------~Gv-~v~lgTD~ 197 (257)
+.... ....+..+.+ .|+ .|+||||-
T Consensus 216 fl~~~----~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf 250 (325)
T 2i5g_A 216 FLKKG----IDSTIDDYAEAIEYVMNIVGEDAIGIGTDF 250 (325)
T ss_dssp GSSSG----GGCBHHHHHHHHHHHHHHHCTTSEEECCCB
T ss_pred hcCCC----CCCCHHHHHHHHHHHHHhcCCceEEECCcC
Confidence 43211 1122333222 365 69999995
No 100
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=94.18 E-value=0.61 Score=41.68 Aligned_cols=127 Identities=15% Similarity=0.113 Sum_probs=78.3
Q ss_pred cHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeecc---------cccHHHHHHHhcCCCcEEeccccc
Q 025169 100 TFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHAC---------CFEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg~---------~l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
.=+++++...+.|+.|-+ |++ ....+++++. .|-.+.|.. .++++.++.++++|-.+-+|-.+.
T Consensus 179 ~G~~vV~emnrlGmivDlSH~s----~~~~~dvl~~s~~PviaSHSn~ral~~h~RNl~De~l~~la~~GGvigv~~~~~ 254 (369)
T 1itu_A 179 FGQRVVKELNRLGVLIDLAHVS----VATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNN 254 (369)
T ss_dssp HHHHHHHHHHHHTCEEECTTBC----HHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHTCEEEECCCHH
T ss_pred hHHHHHHHHHHcCCEEEcCCCC----HHHHHHHHHhcCCCEEEeCCChhhcCCCCCCCCHHHHHHHHHcCCeEEEEechh
Confidence 347788888889988754 664 4566778774 344555652 568999999999997776665443
Q ss_pred ceeccccCCCcccHHHHHh--------cCC-CEEecCCCCCC-------CCCChHHHHHHHHHhCCCCHHHHHHHH-HHH
Q 025169 168 IRTETISSLDIHHFVDLYK--------AQH-PLVLCTDDSGV-------FSTSVSREYDLAASAFSLGRREMFQLA-KSA 230 (257)
Q Consensus 168 ~~l~~~~~~~~~pi~~l~~--------~Gv-~v~lgTD~~~~-------~~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~ 230 (257)
+.... +...+..+.+ .|+ .|+||||-.+. -+.+-+..+.......|+|.+++.+++ .|.
T Consensus 255 fl~~~----~~~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~L~~~G~se~~i~ki~g~N~ 330 (369)
T 1itu_A 255 YISCT----NKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNL 330 (369)
T ss_dssp HHTSS----SCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHTTCCHHHHHHHHTHHH
T ss_pred hcCCC----CCCCHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHhHhH
Confidence 32111 1123333333 376 49999994222 122222333333344799999999986 676
Q ss_pred HHHc
Q 025169 231 VKFI 234 (257)
Q Consensus 231 ~~~~ 234 (257)
++..
T Consensus 331 lRvl 334 (369)
T 1itu_A 331 LRVF 334 (369)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 101
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=94.05 E-value=1.1 Score=38.82 Aligned_cols=168 Identities=13% Similarity=0.128 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecc--CCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---------------
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDLS--GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE--------------- 126 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l~--g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~--------------- 126 (257)
..++.+.+.++.+.+ ..+++|+.+. +.......+.|.++++.|.++|++|.+|.+...+..
T Consensus 120 ~~~~~a~~el~~~~~--~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~ 197 (336)
T 2wm1_A 120 QAPELAVKEMERCVK--ELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPA 197 (336)
T ss_dssp TSHHHHHHHHHHHHH--TSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCSCCCSGGGSSTTHHHHTHHHH
T ss_pred cCHHHHHHHHHHHHH--ccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCCCCccccccccchHHHhccHH
Confidence 345545444444432 2245666442 211122346799999999999999999998643211
Q ss_pred ----h-----HHHHHhcCC--c-EEeecccccHHHHHHH----------hcCCCcEEeccc---ccceeccccCCCcccH
Q 025169 127 ----E-----IQSMLDFLP--Q-RIGHACCFEEEEWRKL----------KSSKIPVEICLT---SNIRTETISSLDIHHF 181 (257)
Q Consensus 127 ----~-----i~~~l~lg~--~-ri~Hg~~l~~~~~~~l----------~~~~i~v~~cP~---SN~~l~~~~~~~~~pi 181 (257)
. +...++--+ . .+.||-..-|..+.++ ... .+..+|. .|+++.+ ..+....+
T Consensus 198 ~~~~~~~~l~~~~v~~~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~--~l~~~p~~~~~~~~~ds-~~~~~~~l 274 (336)
T 2wm1_A 198 ETTIAICSMIMGGVFEKFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQ--DNPMNPKKYLGSFYTDA-LVHDPLSL 274 (336)
T ss_dssp HHHHHHHHHHHTTHHHHCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSS--SCCSCGGGGTTSSEEEC-CCCSHHHH
T ss_pred HHHHHHHHHHHcCchhhCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhc--cCCCCHHHHHHhhEEEe-cccCHHHH
Confidence 0 001111123 2 3789842222222211 101 1112231 1443332 11122235
Q ss_pred HHHHhc-C-CCEEecCCCCCCCCC-ChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCChH
Q 025169 182 VDLYKA-Q-HPLVLCTDDSGVFST-SVSREYDLAASAFSLGRREMFQLA-KSAVKFIFANGR 239 (257)
Q Consensus 182 ~~l~~~-G-v~v~lgTD~~~~~~~-~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~~~~~ 239 (257)
..+++. | =+|-+|||-|-..+. +.. ..+....+++.++..++. .|+.+...++.+
T Consensus 275 ~~~i~~~g~drilfGSD~P~~~~~~~~~---~~l~~~~~l~~~~~~~i~~~NA~rl~~l~~~ 333 (336)
T 2wm1_A 275 KLLTDVIGKDKVILGTDYPFPLGELEPG---KLIESMEEFDEETKNKLKAGNALAFLGLERK 333 (336)
T ss_dssp HHHHHHHCTTSEECCCCBTSTTSCSSTT---HHHHTCTTSCHHHHHHHHTHHHHHHHTCCC-
T ss_pred HHHHHHhCCccEEEeCCCCCCcCCcCHH---HHHHhccCCCHHHHHHHHHHHHHHHhCcCcc
Confidence 555443 5 379999998864432 221 222223589999998885 899888777543
No 102
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=93.66 E-value=0.92 Score=38.84 Aligned_cols=162 Identities=15% Similarity=0.083 Sum_probs=85.6
Q ss_pred hCCCceEEEeccCCCCC-----CChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-c-CCc-EEeeccccc--H-
Q 025169 79 MRDLGVVGIDLSGNPTK-----GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-F-LPQ-RIGHACCFE--E- 147 (257)
Q Consensus 79 ~~~~~vvg~~l~g~~~~-----~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-l-g~~-ri~Hg~~l~--~- 147 (257)
+...+++|+.+...... ...+.|.+.++.++++|+++.+|+... ....+.+.+. + +.. .++|+-... .
T Consensus 97 l~~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~-~l~~l~~ll~~~P~l~iVi~H~G~p~~~~~ 175 (303)
T 4do7_A 97 WRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFER-QLPDVQAFCARHDAHWLVLDHAGKPALAEF 175 (303)
T ss_dssp CCSSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG-GHHHHHHHHHHCCSSCEEEGGGGCCCGGGC
T ss_pred HhhcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHH-HHHHHHHHHHHCCCCCEEEeCCCCCCcccc
Confidence 33456888887532111 122468899999999999999999643 2234444443 3 233 478875431 1
Q ss_pred -----------HHHHHHhcC-CCcEEecccccceeccc-c----CCC---ccc-HHHHHhc-CC-CEEecCCCCCCCC-C
Q 025169 148 -----------EEWRKLKSS-KIPVEICLTSNIRTETI-S----SLD---IHH-FVDLYKA-QH-PLVLCTDDSGVFS-T 203 (257)
Q Consensus 148 -----------~~~~~l~~~-~i~v~~cP~SN~~l~~~-~----~~~---~~p-i~~l~~~-Gv-~v~lgTD~~~~~~-~ 203 (257)
+.+..|++. ++.+- +|-+..... . .+. ..| +..+++. |. +|-.|||-|.... .
T Consensus 176 ~~~~~~~~~w~~~l~~la~~~nv~~k---lSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~~~~~ 252 (303)
T 4do7_A 176 DRDDTALARWRAALRELAALPHVVCK---LSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAA 252 (303)
T ss_dssp C---CHHHHHHHHHHHHHTSTTEEEE---ECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGGGGTC
T ss_pred ccccchHHHHHHHHHHHHhCCCEEEE---eCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCCcCcC
Confidence 245555543 33332 232211110 0 000 012 3344443 43 7999999886543 3
Q ss_pred ChHHHHHHHHH--hCCCCHHHHHHHH-HHHHHHcCCChHHHHHH
Q 025169 204 SVSREYDLAAS--AFSLGRREMFQLA-KSAVKFIFANGRVKEDL 244 (257)
Q Consensus 204 ~l~~E~~~a~~--~~~ls~~~v~~~~-~n~~~~~~~~~~~k~~l 244 (257)
+..+-...+.. ..+++.++..++. .|+.+...++...+.++
T Consensus 253 ~~~~~~~~~~~~~~~~l~~~~~~~i~~~Na~rl~~l~~~~~~~~ 296 (303)
T 4do7_A 253 SYDEVASLVERWAESRLSAAERSALWGGTAARCYALPEPADARL 296 (303)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHTTCC-------
T ss_pred CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCcchhhH
Confidence 33222222221 1368999998885 89999999887665443
No 103
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=93.59 E-value=1.2 Score=39.78 Aligned_cols=131 Identities=10% Similarity=-0.059 Sum_probs=80.1
Q ss_pred HHHHHHHhhccceeeeecc---Ccccc--ccCCCchhhhhh---HhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHh
Q 025169 7 MDAVVEGLRAVSAVDVDFA---SRSID--VRRPVNTKNMND---ACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALE 78 (257)
Q Consensus 7 ~~~~~~~~~~v~y~E~r~~---p~~~~--~~~~~~~~~~~~---~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~ 78 (257)
++..+++++....-+++++ ...|. .-|.|.+++++. +++.+++.|..+.+.....-..+++...+.++.+.+
T Consensus 89 i~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~ 168 (370)
T 3rmj_A 89 IRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIE 168 (370)
T ss_dssp HHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHH
Confidence 4455565554333334433 12233 236778888776 446678888887654332223578888888888877
Q ss_pred hCCCceEEEeccCCCCCCChhcHHHHHHHHHHc-C----CceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 79 MRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-G----LQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 79 ~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~-g----l~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
...+.+.=.|..| ..+|..+.++++..++. + +++.+|+.-+.+- .+...+++.|++++.
T Consensus 169 ~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd 234 (370)
T 3rmj_A 169 AGATTINIPDTVG---YSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVE 234 (370)
T ss_dssp HTCCEEEEECSSS---CCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEecCccC---CcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEE
Confidence 7655333234433 34677888888776653 3 7899999766543 345677788998763
No 104
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.38 E-value=0.74 Score=40.59 Aligned_cols=117 Identities=10% Similarity=-0.054 Sum_probs=74.8
Q ss_pred hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCce
Q 025169 39 NMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQI 115 (257)
Q Consensus 39 ~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v 115 (257)
.+...++.+++.|+.+.+.++..-..+++...+..+.+..+....+.=.|..| ..+|..+.+.++..++. ++++
T Consensus 121 ~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G---~~~P~~v~~lv~~l~~~~~~~~pi 197 (345)
T 1nvm_A 121 VSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGG---AMSMNDIRDRMRAFKAVLKPETQV 197 (345)
T ss_dssp GGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTC---CCCHHHHHHHHHHHHHHSCTTSEE
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcC---ccCHHHHHHHHHHHHHhcCCCceE
Confidence 34455566777788887776544345788888888888877544232233444 23578888888877664 6899
Q ss_pred eeecCCCCCH--hhHHHHHhcCCcEEeecc---------cccHHHHHHHhcCCC
Q 025169 116 TLHCGEIPNK--EEIQSMLDFLPQRIGHAC---------CFEEEEWRKLKSSKI 158 (257)
Q Consensus 116 ~~Ha~E~~~~--~~i~~~l~lg~~ri~Hg~---------~l~~~~~~~l~~~~i 158 (257)
.+|+.-+.+- .+...+++.|++++.=.+ -..++.+..|...|+
T Consensus 198 ~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~~g~ 251 (345)
T 1nvm_A 198 GMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAERLGW 251 (345)
T ss_dssp EEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHTC
T ss_pred EEEECCCccHHHHHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHHHhcCC
Confidence 9999876653 355677888998763221 113555666665443
No 105
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=93.21 E-value=0.98 Score=39.55 Aligned_cols=105 Identities=12% Similarity=0.052 Sum_probs=67.6
Q ss_pred CCCchhhhh---hHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHH
Q 025169 33 RPVNTKNMN---DACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAR 109 (257)
Q Consensus 33 ~~~~~~~~~---~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~ 109 (257)
|.|.+|.++ ++++.+++.|+++.+.....-..+++...+.++.+.+...+.+.=.|..| ..+|..+.++++..+
T Consensus 114 ~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G---~~~P~~v~~lv~~l~ 190 (325)
T 3eeg_A 114 RSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTG---YMLPWQYGERIKYLM 190 (325)
T ss_dssp -CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSS---CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccC---CcCHHHHHHHHHHHH
Confidence 567777765 45566788898876543322235788888888877766554221122223 347788888888776
Q ss_pred Hc-C----CceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 110 EQ-G----LQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 110 ~~-g----l~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+. + +++.+|+.-+.+- .+...+++.|++++.
T Consensus 191 ~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd 228 (325)
T 3eeg_A 191 DNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVE 228 (325)
T ss_dssp HHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEE
T ss_pred HhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEE
Confidence 53 4 8899999866553 345677788998763
No 106
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.20 E-value=2.5 Score=38.88 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=68.6
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeC--CCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHH-cCCc
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDR--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-QGLQ 114 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r--~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~-~gl~ 114 (257)
..+..+++.+++.|.++...+++.. ..+++...+.++.+.+...+.+.=.|..| ...|....++++..++ .+++
T Consensus 127 ~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G---~~~P~~v~~lv~~l~~~~~~~ 203 (464)
T 2nx9_A 127 RNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAG---ILTPYAAEELVSTLKKQVDVE 203 (464)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTS---CCCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCC---CcCHHHHHHHHHHHHHhcCCe
Confidence 4556677788888998876666544 24678888888877776655333345555 3467778877777655 4899
Q ss_pred eeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 115 ITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 115 v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+.+|+.-+.+- .+...+++.|++.+.
T Consensus 204 i~~H~Hnd~GlAvAN~laAv~AGa~~VD 231 (464)
T 2nx9_A 204 LHLHCHSTAGLADMTLLKAIEAGVDRVD 231 (464)
T ss_dssp EEEEECCTTSCHHHHHHHHHHTTCSEEE
T ss_pred EEEEECCCCChHHHHHHHHHHhCCCEEE
Confidence 99999866553 355677888998763
No 107
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.07 E-value=0.45 Score=41.94 Aligned_cols=121 Identities=7% Similarity=-0.059 Sum_probs=74.7
Q ss_pred CCCchhhhhh---HhhcccCCCcEEEEEEEe---eCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHH
Q 025169 33 RPVNTKNMND---ACNGTRGKKIYVRLLLSI---DRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALK 106 (257)
Q Consensus 33 ~~~~~~~~~~---~~~a~~~~gir~~li~~~---~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~ 106 (257)
|.|.++.++. +++.+++.|+++.+.... .-..+++...+.++.+.+...+.+.=.|..| ..+|..+.++++
T Consensus 129 ~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~v~~lv~ 205 (337)
T 3ble_A 129 GKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLG---VLSPEETFQGVD 205 (337)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTC---CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCC---CcCHHHHHHHHH
Confidence 5666666654 446678889988765432 1123566666777766665544332223434 346788888888
Q ss_pred HHHHc--CCceeeecCCCCCH--hhHHHHHhcCCcEEeecc---------cccHHHHHHHhcC
Q 025169 107 FAREQ--GLQITLHCGEIPNK--EEIQSMLDFLPQRIGHAC---------CFEEEEWRKLKSS 156 (257)
Q Consensus 107 ~A~~~--gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~Hg~---------~l~~~~~~~l~~~ 156 (257)
..++. ++++.+|+.-+.+- .+...+++.|++++.=.+ -..++.+..|...
T Consensus 206 ~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 206 SLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp HHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 77654 78999999876553 355678888998764221 1245666666555
No 108
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=92.97 E-value=3 Score=37.63 Aligned_cols=124 Identities=19% Similarity=0.190 Sum_probs=81.0
Q ss_pred hcHHHHHHHHHHc----CCceeeecCCCCCHhhHHHHHh-c--C---------------------------CcEEeeccc
Q 025169 99 TTFLPALKFAREQ----GLQITLHCGEIPNKEEIQSMLD-F--L---------------------------PQRIGHACC 144 (257)
Q Consensus 99 ~~~~~~~~~A~~~----gl~v~~Ha~E~~~~~~i~~~l~-l--g---------------------------~~ri~Hg~~ 144 (257)
+.|++-+++|++. ++|+.+|+-+. .+.+.+.++ . + ...+-||+.
T Consensus 179 ~~F~~QL~LA~e~~~~~~lPv~IH~R~A--~~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~H~Fs 256 (401)
T 3e2v_A 179 VFFEEQLKISCLNDKLSSYPLFLHMRSA--CDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVHSFT 256 (401)
T ss_dssp HHHHHHHHHTTSSHHHHTSCEEEEEESC--HHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCEEECSCC
T ss_pred HHHHHHHHHHHhhhccCCCeEEEEecch--HHHHHHHHHHhhccccccccccccccccccccccccccCCCCcEEEEcCC
Confidence 4577788999999 99999999654 344444442 1 1 235889998
Q ss_pred ccHHHHHHHhcCC--CcEEecccccceeccccCCCcccHHHHHhcCCC---EEecCCCCC--------------------
Q 025169 145 FEEEEWRKLKSSK--IPVEICLTSNIRTETISSLDIHHFVDLYKAQHP---LVLCTDDSG-------------------- 199 (257)
Q Consensus 145 l~~~~~~~l~~~~--i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~---v~lgTD~~~-------------------- 199 (257)
-+.++++.+.+.| ..+.+.+.+ ++. ....++.+ -|| +-|=||.|=
T Consensus 257 Gs~e~a~~~l~lG~~~yis~~g~~-~k~--------~~~~e~v~-~iPldrLLlETDaP~~~i~~~h~~~~yL~p~p~~~ 326 (401)
T 3e2v_A 257 GSAIDLQKLLNLSPNIFIGVNGCS-LRT--------EENLAVVK-QIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVR 326 (401)
T ss_dssp CCHHHHHHHHHHCTTEEEEECGGG-GSS--------HHHHHHHH-TSCGGGEEECCCTTSCCCCTTSTTHHHHHHHHHHS
T ss_pred CCHHHHHHHHhCCCCEEEEeCCEe-cCC--------HHHHHHHH-hCCchhEEEecCCCCcccccccccccccCCCcccc
Confidence 8999998888888 777776642 211 11123322 244 677777771
Q ss_pred -----------------------------CCC-CChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHc
Q 025169 200 -----------------------------VFS-TSVSREYDLAASAFSLGRREMFQLA-KSAVKFI 234 (257)
Q Consensus 200 -----------------------------~~~-~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~ 234 (257)
-|. ..+..-...++...|++.+++.+.+ .|+.+.-
T Consensus 327 ~~~~~p~r~~kk~k~~~~~~~~~~~~~~~rNEP~~v~~Va~~iA~lkg~~~eeva~~t~~Na~~lf 392 (401)
T 3e2v_A 327 DFEYPAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIF 392 (401)
T ss_dssp CCCSSSSEEECGGGSGGGTTSSSCEEETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhccccccccccccCCCCccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 111 2455556777777899999999886 6776544
No 109
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=92.48 E-value=3.6 Score=38.54 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=67.7
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeC--CCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHH-c--C
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDR--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-Q--G 112 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r--~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~-~--g 112 (257)
+.+...++.+++.|.++...++... ..+++...+.++.+.+...+.+.=-|..| ...|..+.++++..++ . +
T Consensus 144 ~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p~~ 220 (539)
T 1rqb_A 144 RNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAA---LLKPQPAYDIIKAIKDTYGQK 220 (539)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCC---CcCHHHHHHHHHHHHHhcCCC
Confidence 4456677778888998876666544 24678888888877776555333334544 3467777777777655 4 6
Q ss_pred CceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 113 LQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 113 l~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+++.+|+.-+.+- .+...+++.|++++.
T Consensus 221 i~I~~H~Hnd~GlAvAN~laAveAGa~~VD 250 (539)
T 1rqb_A 221 TQINLHCHSTTGVTEVSLMKAIEAGVDVVD 250 (539)
T ss_dssp CCEEEEEBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred ceEEEEeCCCCChHHHHHHHHHHhCCCEEE
Confidence 8999999866553 345677888998764
No 110
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.32 E-value=1.4 Score=37.77 Aligned_cols=97 Identities=10% Similarity=0.027 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecc----CCCCCCChhcHHHH---HHHHHHcCCceeeecCCCCCHhhHHHHHhcCCc
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLS----GNPTKGEWTTFLPA---LKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQ 137 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~----g~~~~~~~~~~~~~---~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ 137 (257)
+++.+.+..+...+...+ ++.++.. |.+.....+++.++ ++..++.++++.++. ..++-++.+++.|++
T Consensus 27 ~~~~a~~~a~~~v~~GAd-iIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT---~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAG-IVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDT---MRADVARAALQNGAQ 102 (280)
T ss_dssp SHHHHHHHHHHHHHTTCS-EEEEECC--------------HHHHHHHHHHHHHTTCCEEEEC---SCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCC-EEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeC---CCHHHHHHHHHcCCC
Confidence 466665554444443333 5555432 11111223555544 444444599999987 467778899999999
Q ss_pred EEeecccc--cHHHHHHHhcCCCcEEeccc
Q 025169 138 RIGHACCF--EEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 138 ri~Hg~~l--~~~~~~~l~~~~i~v~~cP~ 165 (257)
.|-+-... +++.++++++.|+++++.+.
T Consensus 103 iINdvsg~~~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 103 MVNDVSGGRADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp EEEETTTTSSCTTHHHHHHHHTCCEEEECC
T ss_pred EEEECCCCCCCHHHHHHHHHhCCeEEEEcC
Confidence 88776533 67889999999999988764
No 111
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=92.29 E-value=2.7 Score=38.14 Aligned_cols=120 Identities=18% Similarity=0.049 Sum_probs=70.5
Q ss_pred ccceeeeecc-Cccccc--cCCCchhhhhh---HhhcccCCCcEEEEEEE-eeCCCCHHHHHHHHHHHHhhCCCceEEEe
Q 025169 16 AVSAVDVDFA-SRSIDV--RRPVNTKNMND---ACNGTRGKKIYVRLLLS-IDRRETTEAAMETVKLALEMRDLGVVGID 88 (257)
Q Consensus 16 ~v~y~E~r~~-p~~~~~--~~~~~~~~~~~---~~~a~~~~gir~~li~~-~~r~~~~e~~~~~~~~~~~~~~~~vvg~~ 88 (257)
.+..+-+.++ ...|.. -|.+.+++++. +++.+++.|+++++... ..| .+++...+.++.+.+...+.+.=.|
T Consensus 123 G~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r-~d~~~~~~v~~~~~~~Ga~~i~l~D 201 (423)
T 3ivs_A 123 GVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFR-SDLVDLLSLYKAVDKIGVNRVGIAD 201 (423)
T ss_dssp TCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGG-SCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred CCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcC-CCHHHHHHHHHHHHHhCCCccccCC
Confidence 3555555544 223332 35666777664 44667888999887644 233 4677777888877777655333334
Q ss_pred ccCCCCCCChhcHHHHHHHHHH-cCCceeeecCCCCCH--hhHHHHHhcCCcEE
Q 025169 89 LSGNPTKGEWTTFLPALKFARE-QGLQITLHCGEIPNK--EEIQSMLDFLPQRI 139 (257)
Q Consensus 89 l~g~~~~~~~~~~~~~~~~A~~-~gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri 139 (257)
..| ..+|..+.++++..++ .++++.+|+.-+.+- .+...+++.|++++
T Consensus 202 TvG---~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 202 TVG---CATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp TTS---CCCHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred ccC---cCCHHHHHHHHHHHHhhcCCeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 444 3467777777766554 488999999766542 34556777888776
No 112
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=92.15 E-value=0.82 Score=40.96 Aligned_cols=120 Identities=11% Similarity=0.059 Sum_probs=73.5
Q ss_pred cceeeeeccC-cccc-ccCCCchhhhh---hHhhcccCCC--cEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEec
Q 025169 17 VSAVDVDFAS-RSID-VRRPVNTKNMN---DACNGTRGKK--IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDL 89 (257)
Q Consensus 17 v~y~E~r~~p-~~~~-~~~~~~~~~~~---~~~~a~~~~g--ir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l 89 (257)
+..+.+.++. ..|. .-|.|.+++++ ..++.+++.| +++.+.+...-..+++...+.++.+.+. .+.+.=.|.
T Consensus 88 ~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT 166 (382)
T 2ztj_A 88 VQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLADT 166 (382)
T ss_dssp CSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEEET
T ss_pred CCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEecCC
Confidence 4455554441 2222 23456666654 4456677788 8888776533335788888888888777 553333345
Q ss_pred cCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 90 SGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
.| ...|..+.++++..++. ++++.+|+.-+.+- .+...+++.|++++.
T Consensus 167 ~G---~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd 219 (382)
T 2ztj_A 167 VG---VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVD 219 (382)
T ss_dssp TS---CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CC---CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 44 23677777777776654 68899998766542 345577778887763
No 113
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.97 E-value=1.2 Score=38.58 Aligned_cols=105 Identities=13% Similarity=0.081 Sum_probs=68.3
Q ss_pred CCCchhhhhh---HhhcccCCCcEEEEEEEee------CCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHH
Q 025169 33 RPVNTKNMND---ACNGTRGKKIYVRLLLSID------RRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLP 103 (257)
Q Consensus 33 ~~~~~~~~~~---~~~a~~~~gir~~li~~~~------r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~ 103 (257)
|.|.+|.++. +++.+++.|++++..++.. -..+++...+.++.+.+...+.+.=.|..| ..+|..+.+
T Consensus 114 ~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~v~~ 190 (307)
T 1ydo_A 114 NKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIG---AANPAQVET 190 (307)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSC---CCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC---CcCHHHHHH
Confidence 4566776654 4466777888876554432 124678888888877777655333334444 346888888
Q ss_pred HHHHHHHc--CCceeeecCCCCC--HhhHHHHHhcCCcEEe
Q 025169 104 ALKFAREQ--GLQITLHCGEIPN--KEEIQSMLDFLPQRIG 140 (257)
Q Consensus 104 ~~~~A~~~--gl~v~~Ha~E~~~--~~~i~~~l~lg~~ri~ 140 (257)
+++..++. ++++.+|+.-+.+ ..+...+++.|++++.
T Consensus 191 lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd 231 (307)
T 1ydo_A 191 VLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFD 231 (307)
T ss_dssp HHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEE
Confidence 88887764 5788889865543 2345677778987763
No 114
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=91.95 E-value=4.1 Score=35.06 Aligned_cols=186 Identities=11% Similarity=0.020 Sum_probs=90.3
Q ss_pred cccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCC--CCCCChhcHHHHHHHHHHcCCceeeecCCCC
Q 025169 46 GTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGN--PTKGEWTTFLPALKFAREQGLQITLHCGEIP 123 (257)
Q Consensus 46 a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~--~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~ 123 (257)
.+++.+=|.+..+++....+++.+.+.++.+.+ ..+++|+-+... ........+.++++.+.++|++|.+|.+...
T Consensus 89 ~~~~~p~rf~g~~a~vp~~~~~~a~~el~r~~~--~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~~~ 166 (312)
T 3ij6_A 89 LVDQHPGKFAGAVAILPMNNIESACKVISSIKD--DENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFDA 166 (312)
T ss_dssp HHHHCTTTEEEEEEECCTTCHHHHHHHHHHHHH--CTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCCCT
T ss_pred HHHhCCCceeeeEEecCccCHHHHHHHHHHHHH--hCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCCCC
Confidence 334444344322344443456666555554432 235777766432 1112336799999999999999999997542
Q ss_pred C-H----------h---hHHHHHhcC-----C--c-EEeecccccHHHHHHHhcC-C-CcEEecccccceeccccCCCcc
Q 025169 124 N-K----------E---EIQSMLDFL-----P--Q-RIGHACCFEEEEWRKLKSS-K-IPVEICLTSNIRTETISSLDIH 179 (257)
Q Consensus 124 ~-~----------~---~i~~~l~lg-----~--~-ri~Hg~~l~~~~~~~l~~~-~-i~v~~cP~SN~~l~~~~~~~~~ 179 (257)
. + + .+...+.-| | . .++|+-..-|-.++++... . -+.+.+ .|+++...--....
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~li~~gv~~rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~--~nvy~dts~~~~~~ 244 (312)
T 3ij6_A 167 RKPDNNLVFSWEYELSQAMLQLVQSDLFQDYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDF--KKFYVDTAILGNTP 244 (312)
T ss_dssp TSSSCCTTTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHG--GGCEEECCSSSCHH
T ss_pred CCCCcccccccHHHHHHHHHHHHHcChHhhCCCCeEEecCCcccHHHHHHHHHHhcccchHHHc--CeEEEeCCCCCCHH
Confidence 1 1 0 111111112 2 2 3688742111111111100 0 000111 13333210000112
Q ss_pred cHHHHHh-cCC-CEEecCCCCCCC-CCChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcC
Q 025169 180 HFVDLYK-AQH-PLVLCTDDSGVF-STSVSREYDLAASAFSLGRREMFQLA-KSAVKFIF 235 (257)
Q Consensus 180 pi~~l~~-~Gv-~v~lgTD~~~~~-~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~ 235 (257)
.+..+++ .|. +|-+|||-|-.. ......+........+++.++..++. .|+.+...
T Consensus 245 ~l~~~~~~~g~drilfgSD~P~~~~p~~~~~~~~~~l~~l~l~~~~~~~i~~~NA~rl~~ 304 (312)
T 3ij6_A 245 ALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIITQAINDLTISDKDKQKIFHDNYYSLIK 304 (312)
T ss_dssp HHHHHHHHHCGGGEECCCCBTSSSTTTCSHHHHHHHHHTSSSCHHHHHHHHTHHHHHHHC
T ss_pred HHHHHHHhCCCCeEEEeCCCCCCcCCCcchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 2444443 353 799999988653 22222333333334589999998886 78776543
No 115
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=91.77 E-value=2 Score=38.93 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeecc---------cccHHHHHHHhcCCCcEEeccc
Q 025169 100 TFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHAC---------CFEEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg~---------~l~~~~~~~l~~~~i~v~~cP~ 165 (257)
.=+++++...+.|+.|-+ |++ ....+++++. .|-.+.|.. .++++.++.++++|-.+-+|..
T Consensus 210 ~G~~vV~eMnrlGmivDlSH~s----~~t~~dvl~~s~~PvIaSHSnaral~~hpRNl~De~l~~la~~GGvigv~f~ 283 (417)
T 2rag_A 210 LGLRWLAEANRLGIVIDVSHAS----DDVVDQSVALSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSI 283 (417)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBC----HHHHHHHHHHCSSCCEEEEEEETTTSCCTTEECHHHHHHHHHTTCEEEECSS
T ss_pred hHHHHHHHHHHcCCEEECCCCC----HHHHHHHHHhcCCCeEEecCchHhhCCCCCCCCHHHHHHHHHcCCEEEEEEE
Confidence 347788888888988754 654 4566788875 444566753 4689999999999977766654
No 116
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=91.36 E-value=1.9 Score=37.01 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=66.3
Q ss_pred CCCchhhhhh---HhhcccCCCcEEEEEEEee-------CCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHH
Q 025169 33 RPVNTKNMND---ACNGTRGKKIYVRLLLSID-------RRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFL 102 (257)
Q Consensus 33 ~~~~~~~~~~---~~~a~~~~gir~~li~~~~-------r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~ 102 (257)
+.+.++.++. +++.+++.|+++...++.. | .+++...+.++.+.+...+.+.=.|..| ..+|..+.
T Consensus 113 ~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~ 188 (298)
T 2cw6_A 113 NCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGK-ISPAKVAEVTKKFYSMGCYEISLGDTIG---VGTPGIMK 188 (298)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBS-CCHHHHHHHHHHHHHTTCSEEEEEETTS---CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCC-CCHHHHHHHHHHHHHcCCCEEEecCCCC---CcCHHHHH
Confidence 4566666554 4466677888876655422 3 4678888888877777655333334444 34677888
Q ss_pred HHHHHHHHc--CCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 103 PALKFAREQ--GLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 103 ~~~~~A~~~--gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
++++..++. ++++.+|+.-+.+- .+...+++.|++.+.
T Consensus 189 ~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd 230 (298)
T 2cw6_A 189 DMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVD 230 (298)
T ss_dssp HHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEE
Confidence 887776654 47788888655442 345567778887754
No 117
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=91.26 E-value=1.8 Score=37.22 Aligned_cols=105 Identities=11% Similarity=-0.034 Sum_probs=63.1
Q ss_pred CCCchhhhhh---HhhcccCCCcEEEEEEEee------CCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHH
Q 025169 33 RPVNTKNMND---ACNGTRGKKIYVRLLLSID------RRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLP 103 (257)
Q Consensus 33 ~~~~~~~~~~---~~~a~~~~gir~~li~~~~------r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~ 103 (257)
|.|.+|.++. +++.+++.|+.+..-++.. -..+++.+.+.++.+.+...+.+.=.|..|. ..|....+
T Consensus 116 ~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~ 192 (302)
T 2ftp_A 116 NCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRR 192 (302)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHH
Confidence 4667776654 3456677787765444332 0146777777777666665443222244442 36777777
Q ss_pred HHHHHHHc--CCceeeecCCCCC--HhhHHHHHhcCCcEEe
Q 025169 104 ALKFAREQ--GLQITLHCGEIPN--KEEIQSMLDFLPQRIG 140 (257)
Q Consensus 104 ~~~~A~~~--gl~v~~Ha~E~~~--~~~i~~~l~lg~~ri~ 140 (257)
+++..++. ++++.+|+.-+.+ ..+...+++.|++.+.
T Consensus 193 lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd 233 (302)
T 2ftp_A 193 LIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFD 233 (302)
T ss_dssp HHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 77766553 4788888865443 3455677778887653
No 118
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=91.07 E-value=2.1 Score=36.77 Aligned_cols=96 Identities=11% Similarity=0.135 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhhCCCceEEEeccCC-CC--CCC-hhcHH---HHHHHHHHc-CCceeeecCCCCCHhhHHHHHhcCCc
Q 025169 66 TEAAMETVKLALEMRDLGVVGIDLSGN-PT--KGE-WTTFL---PALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQ 137 (257)
Q Consensus 66 ~e~~~~~~~~~~~~~~~~vvg~~l~g~-~~--~~~-~~~~~---~~~~~A~~~-gl~v~~Ha~E~~~~~~i~~~l~lg~~ 137 (257)
++.+.+..+...+...+ ++.++..+. |. ..+ .++++ ++++..++. ++++.++. ..++.++.+++.|++
T Consensus 37 ~~~a~~~a~~~v~~GAd-iIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT---~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 37 LIDAVKHANLMINAGAT-IIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDT---SKPEVIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC---CCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCC-EEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeC---CCHHHHHHHHHcCCC
Confidence 45555444444444443 655554321 22 122 34444 444444443 99999997 467778899999999
Q ss_pred EEeeccc-ccHHHHHHHhcCCCcEEeccc
Q 025169 138 RIGHACC-FEEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 138 ri~Hg~~-l~~~~~~~l~~~~i~v~~cP~ 165 (257)
.|-+... .+++.++++++.|+++++.+.
T Consensus 113 iINdvsg~~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 113 IINDIRSLSEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEEETTTTCSTTHHHHHHHHTCCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHhCCeEEEEcc
Confidence 9887654 467888999999999988765
No 119
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=90.68 E-value=3.2 Score=36.89 Aligned_cols=130 Identities=12% Similarity=0.076 Sum_probs=74.6
Q ss_pred cHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeec---------ccccHHHHHHHhcCCCcEEeccccc
Q 025169 100 TFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHA---------CCFEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg---------~~l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
.=+++++...+.|+.|-+ |++ ....+++++. .|-.+.|. -.++++.++.++++|=.|-+|..+.
T Consensus 193 ~G~~vV~emnrlGmivDlSH~s----~~t~~dvl~~s~~PviaSHSnaral~~h~RNl~De~l~ala~~GGvigv~f~~~ 268 (364)
T 3ly0_A 193 AGRRLVAECNRLKIMLDLSHLN----EKGFDDVARLSDAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVGLNFATS 268 (364)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBC----HHHHHHHHHHCSSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTTCEEEECCCHH
T ss_pred HHHHHHHHHHHcCCEEEcCCCC----HHHHHHHHHhcCCCeEEeCCchhhcCCCCCCCCHHHHHHHHHcCcEEEEeccHh
Confidence 347788888889988764 764 4566778774 34455554 3468999999999996666655443
Q ss_pred ceeccccCCCccc-------HHHHHh-cCC-CEEecCCCCCCCC----CCh--HHHHHHHHHhCCCCHHHHHHHH-HHHH
Q 025169 168 IRTETISSLDIHH-------FVDLYK-AQH-PLVLCTDDSGVFS----TSV--SREYDLAASAFSLGRREMFQLA-KSAV 231 (257)
Q Consensus 168 ~~l~~~~~~~~~p-------i~~l~~-~Gv-~v~lgTD~~~~~~----~~l--~~E~~~a~~~~~ls~~~v~~~~-~n~~ 231 (257)
+....-..-...+ |..+.+ .|+ .|+||||=.+... .+. +-.+.......|+|.+|+.++. .|-+
T Consensus 269 fl~~~~~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~gl~d~s~~p~L~~~L~~rG~se~~i~ki~g~N~l 348 (364)
T 3ly0_A 269 FLREDGRRSAEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQGIADVTGLPALQAAMRAHGYDEPLMRKLCHENWY 348 (364)
T ss_dssp HHSTTCCCCSCCCSHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTTTCSGGGHHHHHHHHHHHTCCHHHHHHHHTHHHH
T ss_pred hhcCCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHhHhHH
Confidence 2211000000112 222222 476 5999999322211 121 2222222233599999999986 6655
Q ss_pred HH
Q 025169 232 KF 233 (257)
Q Consensus 232 ~~ 233 (257)
+.
T Consensus 349 Rv 350 (364)
T 3ly0_A 349 GL 350 (364)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 120
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=88.98 E-value=2.9 Score=35.74 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=65.3
Q ss_pred CCCchhhhhh---HhhcccCCCcEEEEEEE--e-----eCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHH
Q 025169 33 RPVNTKNMND---ACNGTRGKKIYVRLLLS--I-----DRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFL 102 (257)
Q Consensus 33 ~~~~~~~~~~---~~~a~~~~gir~~li~~--~-----~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~ 102 (257)
+.+.++.++. +++.+++.|+.+..-++ + .| .+++.+.+.++.+.+...+.+.=.|..|. .+|....
T Consensus 112 ~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~-~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~ 187 (295)
T 1ydn_A 112 NCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGP-VTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVA 187 (295)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEE-CCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCC-CCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHH
Confidence 5667777655 45667788888763333 2 23 46888888888777776553322244442 4677777
Q ss_pred HHHHHHHHc-C-CceeeecCCCCC--HhhHHHHHhcCCcEEe
Q 025169 103 PALKFAREQ-G-LQITLHCGEIPN--KEEIQSMLDFLPQRIG 140 (257)
Q Consensus 103 ~~~~~A~~~-g-l~v~~Ha~E~~~--~~~i~~~l~lg~~ri~ 140 (257)
++++..++. . +++.+|+.-+.+ ..+...+++.|++.+.
T Consensus 188 ~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd 229 (295)
T 1ydn_A 188 AMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFD 229 (295)
T ss_dssp HHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEE
Confidence 777776654 3 678888765444 2455677778887653
No 121
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=88.95 E-value=8.9 Score=31.77 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=53.7
Q ss_pred cHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEee--cccc-cHHHHHHHhcCCCcEEecccccceeccccCC
Q 025169 100 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH--ACCF-EEEEWRKLKSSKIPVEICLTSNIRTETISSL 176 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~H--g~~l-~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~ 176 (257)
.-.++.+.++++|+++..=+. .+.++..++++|++.+.= +-.+ .++.++.++.-=-.+-+||+.-+
T Consensus 115 ~~~~vi~~~~~~gi~~ipGv~---TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~ptGGI-------- 183 (232)
T 4e38_A 115 FNPNTVRACQEIGIDIVPGVN---NPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLMPTGGI-------- 183 (232)
T ss_dssp CCHHHHHHHHHHTCEEECEEC---SHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEEEBSSC--------
T ss_pred CCHHHHHHHHHcCCCEEcCCC---CHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCCCeeeEcCC--------
Confidence 445667778889999877553 578888999999987641 1112 24666776653223556776433
Q ss_pred CcccHHHHHhcCCCEEe
Q 025169 177 DIHHFVDLYKAQHPLVL 193 (257)
Q Consensus 177 ~~~pi~~l~~~Gv~v~l 193 (257)
....+.++++.|.-.+.
T Consensus 184 ~~~n~~~~l~aGa~~~v 200 (232)
T 4e38_A 184 TPSNIDNYLAIPQVLAC 200 (232)
T ss_dssp CTTTHHHHHTSTTBCCE
T ss_pred CHHHHHHHHHCCCeEEE
Confidence 22468999999854433
No 122
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=88.58 E-value=6 Score=33.37 Aligned_cols=156 Identities=13% Similarity=0.059 Sum_probs=83.4
Q ss_pred cceeeeeccCccccccCCCchh-hhhhHhhcccCCCcEEEEEEEeeCCC------CHHHH---HHHHHHHHhhCCCceEE
Q 025169 17 VSAVDVDFASRSIDVRRPVNTK-NMNDACNGTRGKKIYVRLLLSIDRRE------TTEAA---METVKLALEMRDLGVVG 86 (257)
Q Consensus 17 v~y~E~r~~p~~~~~~~~~~~~-~~~~~~~a~~~~gir~~li~~~~r~~------~~e~~---~~~~~~~~~~~~~~vvg 86 (257)
..-+|+=-. ....|++-+- .++.+.+.. .|. +..+.|.+ +.++. .+-++.+.+...+|+|
T Consensus 22 AdRIELc~~---L~~GGlTPS~g~i~~~~~~~---~ip---v~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV- 91 (256)
T 1twd_A 22 ADRVELCAA---PKEGGLTPSLGVLKSVRQRV---TIP---VHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLV- 91 (256)
T ss_dssp CSEEEECBC---GGGTCBCCCHHHHHHHHHHC---CSC---EEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEE-
T ss_pred CCEEEEcCC---cccCCCCCCHHHHHHHHHHc---CCc---eEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEE-
Confidence 444555432 2456777554 344444332 333 23445642 34443 3444455555545432
Q ss_pred EeccCCCCCCChhcHHHHHHHHHHcCCceeeecC--CCCCH-hhHHHHHhcCCcE-Eeeccccc----HHHHHHHh-cCC
Q 025169 87 IDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG--EIPNK-EEIQSMLDFLPQR-IGHACCFE----EEEWRKLK-SSK 157 (257)
Q Consensus 87 ~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~--E~~~~-~~i~~~l~lg~~r-i~Hg~~l~----~~~~~~l~-~~~ 157 (257)
|+.--.....+.+.++++.+.|+ |+++|+|-+ +..++ +.+...+++|.+| +-||-..+ -+.++.|. ..+
T Consensus 92 ~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~ 169 (256)
T 1twd_A 92 TGVLDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRD 169 (256)
T ss_dssp ECCBCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTSSS
T ss_pred EeeECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHhhC
Confidence 12212233446677888888775 899999965 22333 3455666789987 57775432 23455544 345
Q ss_pred CcEEecccccceeccccCCCcccHHHHHhcCCCEEe
Q 025169 158 IPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVL 193 (257)
Q Consensus 158 i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~l 193 (257)
.+++-|.+-+ ....+.+++.-|+.-.=
T Consensus 170 -~i~Im~GgGv--------~~~Ni~~l~~tGv~e~H 196 (256)
T 1twd_A 170 -APIIMAGAGV--------RAENLHHFLDAGVLEVH 196 (256)
T ss_dssp -CCEEEEESSC--------CTTTHHHHHHHTCSEEE
T ss_pred -CcEEEecCCc--------CHHHHHHHHHcCCCeEe
Confidence 6677675532 23456777777876433
No 123
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=88.39 E-value=1.8 Score=36.50 Aligned_cols=89 Identities=11% Similarity=-0.090 Sum_probs=55.1
Q ss_pred HhcC-CcEEeeccc-----ccHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCC--CC
Q 025169 132 LDFL-PQRIGHACC-----FEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVF--ST 203 (257)
Q Consensus 132 l~lg-~~ri~Hg~~-----l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~--~~ 203 (257)
...| ...|+|-.. -+++.++.+++.|+.++++-.|.. +...+........+++.|+.+++|||.=... +.
T Consensus 126 ~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~~iEiN~~s~~--g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~~r~~ 203 (262)
T 3qy7_A 126 QLKGYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSLA--GIFGKQLKAFSLRLVEANLIHFVASDAHNVKTRNF 203 (262)
T ss_dssp HHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTCEEEEEHHHHH--TTTCHHHHHHHHHHHHTTCCCEEECCBCSSSSSCC
T ss_pred HHCCCcEEEECCCccccccccHHHHHHHHHCCCEEEEECCccC--cccchHHHHHHHHHHhCCCeEEEEccCCCCCCCCc
Confidence 3344 467888531 145778999999999988765532 1110001223677889999999999953333 34
Q ss_pred ChHHHHHHHHHhCCCCHHH
Q 025169 204 SVSREYDLAASAFSLGRRE 222 (257)
Q Consensus 204 ~l~~E~~~a~~~~~ls~~~ 222 (257)
.+.+-+..+.+.+|.....
T Consensus 204 ~~~~a~~~l~~~~G~~~a~ 222 (262)
T 3qy7_A 204 HTQEALYVLEKEFGSELPY 222 (262)
T ss_dssp CHHHHHHHHHHHHCSHHHH
T ss_pred hHHHHHHHHHHHhCHHHHH
Confidence 6666566665556665433
No 124
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=88.13 E-value=3.7 Score=37.16 Aligned_cols=60 Identities=13% Similarity=0.219 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeecc---------cccHHHHHHHhcCCCcEEec
Q 025169 100 TFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHAC---------CFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg~---------~l~~~~~~~l~~~~i~v~~c 163 (257)
.=+++++...+.|+.|-+ |++ ....++++++ .|-.+.|.. .++++.++.|+++|-.|-+|
T Consensus 194 ~G~~vV~eMNrlGmiVDlSH~s----~~t~~dvl~~s~~PVIaSHSnaral~~hpRNl~De~l~~la~~GGVIgv~ 265 (417)
T 3b40_A 194 LGKQAVERLNDLGVIIDVSQMS----TKALEQVAALSRAPIVASHSAPRALVDIKRNLSDHEMQLIKDSGGVIQVV 265 (417)
T ss_dssp HHHHHHHHHHHHTCEEECTTBC----HHHHHHHHHHCSSCEEEEEECBTTTSCCTTSBCHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHcCCEEECCCCC----HHHHHHHHHhcCCCEEEeCCchhhcCCCCCCCCHHHHHHHHHcCCEEEEE
Confidence 347788888889988754 664 4567788875 344556753 56899999999999666555
No 125
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=87.93 E-value=9.2 Score=33.72 Aligned_cols=141 Identities=9% Similarity=-0.012 Sum_probs=80.0
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCC-----HhhHHHHHhc---CCcEEeecccc-cHHHHHHHhcC-CCcEEecccc
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPN-----KEEIQSMLDF---LPQRIGHACCF-EEEEWRKLKSS-KIPVEICLTS 166 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~-----~~~i~~~l~l---g~~ri~Hg~~l-~~~~~~~l~~~-~i~v~~cP~S 166 (257)
+.+.+.++++.+++.|.++.+|+....- ...+..++.+ -+..=.|-+++ +.+.++++++. .|..++||--
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A~~VtaEv~phh 213 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDYENLYATITLHH 213 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSCGGGTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHCTTEEEEECSGG
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchHhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhcCCceEEEechh
Confidence 5578999999999999999999853321 1123333322 11222466666 56778888774 6778999842
Q ss_pred cce-------------eccccCCCcc----cHHHHHhcCCC-EEecCCCCC-----------CCC-CChHH---HHHHHH
Q 025169 167 NIR-------------TETISSLDIH----HFVDLYKAQHP-LVLCTDDSG-----------VFS-TSVSR---EYDLAA 213 (257)
Q Consensus 167 N~~-------------l~~~~~~~~~----pi~~l~~~Gv~-v~lgTD~~~-----------~~~-~~l~~---E~~~a~ 213 (257)
=.. ...-|+++.. -+.+.+..|.. +.|+||-.+ .+| .++.. =+....
T Consensus 214 L~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~~~g~~Gi~~~~~~L~l~~~~~ 293 (359)
T 3pnu_A 214 LIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKECCGCAAGVFSAPVILPVLAELF 293 (359)
T ss_dssp GTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC------CCCSCBCCGGGHHHHHHHHH
T ss_pred hEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCCCCCCCChhhHHHHHHHHHHHH
Confidence 110 0111122111 13444556754 489999432 223 12211 111112
Q ss_pred HhCCCCHHHHHHH-HHHHHHHcCCCh
Q 025169 214 SAFSLGRREMFQL-AKSAVKFIFANG 238 (257)
Q Consensus 214 ~~~~ls~~~v~~~-~~n~~~~~~~~~ 238 (257)
. -+++.+++.++ +.|.++..+++.
T Consensus 294 ~-~~~~l~~lv~~~s~nPAki~gL~~ 318 (359)
T 3pnu_A 294 K-QNSSEENLQKFLSDNTCKIYDLKF 318 (359)
T ss_dssp H-HHSCHHHHHHHHTHHHHHHHTCCC
T ss_pred h-hcCCHHHHHHHHHHhHHHHhCCCC
Confidence 2 23688898886 589999988864
No 126
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=87.06 E-value=5.2 Score=33.01 Aligned_cols=95 Identities=12% Similarity=0.137 Sum_probs=52.8
Q ss_pred cC-CcEEeecccc-----cHHHHHHHhcCCCcEEecccccceeccccCCCcc---cHHHHHhcCCCEEecCCCCCCC--C
Q 025169 134 FL-PQRIGHACCF-----EEEEWRKLKSSKIPVEICLTSNIRTETISSLDIH---HFVDLYKAQHPLVLCTDDSGVF--S 202 (257)
Q Consensus 134 lg-~~ri~Hg~~l-----~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~---pi~~l~~~Gv~v~lgTD~~~~~--~ 202 (257)
.| .+.|+|--.. .++.++.+++.|+.++++-.|-...+...+.... -...+++.|+++++|||.=... +
T Consensus 132 ~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GSDaH~~~~~~ 211 (247)
T 2wje_A 132 LGITPVIAHIERYDALENNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRP 211 (247)
T ss_dssp TTCEEEETTGGGCGGGTTCHHHHHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEECCBCCSSSSC
T ss_pred CCCcEEEEehhhHHHHhhCHHHHHHHHHCCCEEEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEeCCCCCcccC
Confidence 44 4788986321 4678999999999999876543001111000011 1344568999999999953333 2
Q ss_pred CChHHHHHHHHHhCCCCHHHHHHHH-HHH
Q 025169 203 TSVSREYDLAASAFSLGRREMFQLA-KSA 230 (257)
Q Consensus 203 ~~l~~E~~~a~~~~~ls~~~v~~~~-~n~ 230 (257)
..+.+-+..+.+.+| .+.+..+. .|+
T Consensus 212 ~~~~~a~~~l~~~~G--~~~~~~l~~~n~ 238 (247)
T 2wje_A 212 PHMAEAYDLVTQKYG--EAKAQELFIDNP 238 (247)
T ss_dssp CCHHHHHHHHHHHHC--HHHHHHHHTHHH
T ss_pred hhHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 344333444434455 44444432 454
No 127
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=86.67 E-value=7 Score=34.01 Aligned_cols=124 Identities=10% Similarity=0.146 Sum_probs=74.5
Q ss_pred HHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeecc---------cccHHHHHHHhcCCCcEEecccccc
Q 025169 101 FLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHAC---------CFEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 101 ~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg~---------~l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
=+++++...+.|+.|-+ |++ ....++++++ .| ...|.. .++++.++.++++|=.+=+|..+.+
T Consensus 156 G~~vV~eMnrlGmivDlSH~s----~~t~~dvl~~s~~P-iaSHSnaral~~h~RNl~D~~l~ala~~GGvigv~~~~~f 230 (318)
T 3neh_A 156 GKDIIHLLNERKVFTDVSHLS----VKAFWETLEQAEFV-IASHSNAKAICSHPRNLDDEQIKAMIEHDAMIHVVFYPLF 230 (318)
T ss_dssp HHHHHHHHHHHTCEEECTTBC----HHHHHHHHHHCSSE-EESSCCBTTTSCCTTSBCHHHHHHHHHTTCEEEECCCHHH
T ss_pred hHHHHHHHHHcCCeEEcCCCC----HHHHHHHHHhcCCC-cccccchhhcCCCCCCCCHHHHHHHHHcCCEEEEEeeHHh
Confidence 47788888888988764 764 4466788875 56 666753 4588999999999855444433222
Q ss_pred eeccccCCCcccHHH-------HHh-cCC-CEEecCCCCCCC----C-CCh--HHHHHHHHHhCCCCHHHHHHHH-HHHH
Q 025169 169 RTETISSLDIHHFVD-------LYK-AQH-PLVLCTDDSGVF----S-TSV--SREYDLAASAFSLGRREMFQLA-KSAV 231 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~-------l~~-~Gv-~v~lgTD~~~~~----~-~~l--~~E~~~a~~~~~ls~~~v~~~~-~n~~ 231 (257)
.... +..++.. +.+ .|+ .|+||||=-+.. + .+. +-.+...... |+|.+++.++. .|.+
T Consensus 231 l~~~----~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~gl~d~s~~p~L~~~L~~-g~se~~i~ki~g~N~l 305 (318)
T 3neh_A 231 TTNN----GVADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGKYQSFLETLEK-HYTKEEIEGFASRNFL 305 (318)
T ss_dssp HCTT----SCCBHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBTBSSGGGHHHHHHHHTT-TSCHHHHHHHHTHHHH
T ss_pred hCCC----CCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHhHhHH
Confidence 1111 1223333 333 355 599999932211 1 122 2222333334 89999999986 7776
Q ss_pred HHc
Q 025169 232 KFI 234 (257)
Q Consensus 232 ~~~ 234 (257)
+..
T Consensus 306 Rv~ 308 (318)
T 3neh_A 306 NHL 308 (318)
T ss_dssp HTC
T ss_pred HHH
Confidence 654
No 128
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=86.22 E-value=10 Score=36.79 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=67.5
Q ss_pred hhhhhHhhcccCCCcEEEEEEEee----C----CCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHH
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSID----R----RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAR 109 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~----r----~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~ 109 (257)
+.+...++.+++.|..+....+.. + ..+++...+.++.+.+...+.+.=.|..| ...|..+.++++..+
T Consensus 224 ~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G---~~~P~~v~~lV~~lk 300 (718)
T 3bg3_A 224 PNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAG---LLKPTACTMLVSSLR 300 (718)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTS---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCC---CcCHHHHHHHHHHHH
Confidence 355566677778888887766654 1 12677778888877777655333334544 346778888877766
Q ss_pred H-c-CCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 110 E-Q-GLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 110 ~-~-gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+ . ++++.+|+.-+.+- .+...|++.|++++.
T Consensus 301 ~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD 335 (718)
T 3bg3_A 301 DRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVD 335 (718)
T ss_dssp HHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEE
T ss_pred HhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEE
Confidence 5 3 78999999876653 345677888998764
No 129
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=85.77 E-value=6.2 Score=34.03 Aligned_cols=65 Identities=9% Similarity=0.033 Sum_probs=48.1
Q ss_pred hhcHHHHH---HHHHH-cCCceeeecCCCCCHhhHHHHHhcCCcEEeecccc--cHHHHHHHhcCCCcEEeccc
Q 025169 98 WTTFLPAL---KFARE-QGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--EEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 98 ~~~~~~~~---~~A~~-~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l--~~~~~~~l~~~~i~v~~cP~ 165 (257)
.++++++. +..++ .++++.+.. ..++-++.+++.|++.|..-... +++.++.+++.|+++++.+.
T Consensus 97 ~eE~~RvvpvI~~l~~~~~vpiSIDT---~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 97 EEEIKRVVPMIQAVSKEVKLPISIDT---YKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCEEEEC---SCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEeC---CCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 35555444 55554 499999987 45677788888999988765543 67778999999999887664
No 130
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=85.46 E-value=14 Score=30.41 Aligned_cols=151 Identities=15% Similarity=0.159 Sum_probs=79.3
Q ss_pred ccCCCchh-hhhhHh-hcccCCCcEEEEEEEeeCCC------CHHHH---HHHHHHHHhhCCCceEEEeccCCCCCCChh
Q 025169 31 VRRPVNTK-NMNDAC-NGTRGKKIYVRLLLSIDRRE------TTEAA---METVKLALEMRDLGVVGIDLSGNPTKGEWT 99 (257)
Q Consensus 31 ~~~~~~~~-~~~~~~-~a~~~~gir~~li~~~~r~~------~~e~~---~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~ 99 (257)
..|++-+- .++.+. + ++...|.++ .+.|.+ +.++. .+-++.+.+...+++| |+.--.....+.+
T Consensus 33 ~GGlTPS~g~i~~~~~~-~~~~~ipV~---vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV-~G~Lt~dg~iD~~ 107 (224)
T 2bdq_A 33 VGGTTPSYGVIKEANQY-LHEKGISVA---VMIRPRGGNFVYNDLELRIMEEDILRAVELESDALV-LGILTSNNHIDTE 107 (224)
T ss_dssp GTCBCCCHHHHHHHHHH-HHHTTCEEE---EECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEE-ECCBCTTSSBCHH
T ss_pred cCCcCCCHHHHHHHHHh-hhhcCCceE---EEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEE-EeeECCCCCcCHH
Confidence 45666543 344332 1 233445543 345542 34443 3344455555545432 1221223344667
Q ss_pred cHHHHHHHHHHcCCceeeecC--CC--CCH-hhHHHHHhcCCcE-Eeeccccc------HHHHHHH-hcCCCcEEecccc
Q 025169 100 TFLPALKFAREQGLQITLHCG--EI--PNK-EEIQSMLDFLPQR-IGHACCFE------EEEWRKL-KSSKIPVEICLTS 166 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~Ha~--E~--~~~-~~i~~~l~lg~~r-i~Hg~~l~------~~~~~~l-~~~~i~v~~cP~S 166 (257)
.++++.+.|+ |+++|+|-+ +. .++ +.+...+++|.+| +-||-..+ -+.++.| ...+-.+++-|.+
T Consensus 108 ~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~Gg 185 (224)
T 2bdq_A 108 AIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGG 185 (224)
T ss_dssp HHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECS
T ss_pred HHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCC
Confidence 7888888775 899999964 22 223 3455666789988 56775443 1233333 3223345566654
Q ss_pred cceeccccCCCcccHHHHH-hcCCCEEecCC
Q 025169 167 NIRTETISSLDIHHFVDLY-KAQHPLVLCTD 196 (257)
Q Consensus 167 N~~l~~~~~~~~~pi~~l~-~~Gv~v~lgTD 196 (257)
-+ ....+.+++ .-|+.-.=+|.
T Consensus 186 GV--------~~~Ni~~l~~~tGv~e~H~s~ 208 (224)
T 2bdq_A 186 GV--------TAENYQYICQETGVKQAHGTR 208 (224)
T ss_dssp SC--------CTTTHHHHHHHHTCCEEEETT
T ss_pred CC--------CHHHHHHHHHhhCCCEEcccc
Confidence 22 234577777 46887555554
No 131
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=85.24 E-value=2.3 Score=36.91 Aligned_cols=77 Identities=21% Similarity=0.158 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecc-CCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecc
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHAC 143 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~-g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~ 143 (257)
++++..+.++.+.+..-. .+.+. |.+...+.+.+.++++.+++.++.+++..+.. .++.+....+.|.+++.+++
T Consensus 85 s~eei~~~i~~~~~~g~~---~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~l-~~e~l~~L~~ag~~~v~i~l 160 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAK---TIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGEW-PREYYEKWKEAGADRYLLRH 160 (348)
T ss_dssp CHHHHHHHHHHHHHTTCS---EEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCCC-CHHHHHHHHHHTCCEEECCC
T ss_pred CHHHHHHHHHHHHHCCCC---EEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCCC-CHHHHHHHHHhCCCEEeeee
Confidence 566666666655443322 23333 33234455778889999988888888777654 35555555567888877665
Q ss_pred cc
Q 025169 144 CF 145 (257)
Q Consensus 144 ~l 145 (257)
..
T Consensus 161 et 162 (348)
T 3iix_A 161 ET 162 (348)
T ss_dssp BC
T ss_pred ee
Confidence 43
No 132
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=84.04 E-value=15 Score=32.11 Aligned_cols=83 Identities=13% Similarity=0.124 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEeccC-CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeec
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDLSG-NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHA 142 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l~g-~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg 142 (257)
.++++..+.++...+..-.. +.+...+ .+...+.+.+.++++.+++.|+.+++..|- ..++.+....+.|.+++.++
T Consensus 99 ~s~eei~~~~~~~~~~g~~~-i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~-l~~e~l~~L~~aGvd~v~i~ 176 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTR-FCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT-LSESQAQRLANAGLDYYNHN 176 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSE-EEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS-CCHHHHHHHHHHCCCEEECC
T ss_pred CCHHHHHHHHHHHHHcCCcE-EEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC-CCHHHHHHHHHCCCCEEeec
Confidence 35666666666554433222 2232222 122345678899999999999988876654 24555556566899999888
Q ss_pred ccccHH
Q 025169 143 CCFEEE 148 (257)
Q Consensus 143 ~~l~~~ 148 (257)
+..+++
T Consensus 177 les~~e 182 (369)
T 1r30_A 177 LDTSPE 182 (369)
T ss_dssp CBSCHH
T ss_pred CcCCHH
Confidence 766544
No 133
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=83.33 E-value=3.3 Score=36.19 Aligned_cols=141 Identities=10% Similarity=-0.013 Sum_probs=83.0
Q ss_pred hhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCC----CceEEEeccCCCC-CCChh-cHHHHHHHHHHcCC
Q 025169 40 MNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRD----LGVVGIDLSGNPT-KGEWT-TFLPALKFAREQGL 113 (257)
Q Consensus 40 ~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~----~~vvg~~l~g~~~-~~~~~-~~~~~~~~A~~~gl 113 (257)
++++++.+++.|+...++.++ +++...+.++++.+|.+ .....+|+.+... ..+.+ .+..+.+.+.+..-
T Consensus 54 ~~~vl~rA~~aGV~~ii~~g~----~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 54 IDVVLQRAERNGLSHIIITSG----CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp HHHHHHHHHHTTEEEEEECCC----SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHcCCcEEEEccC----CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 344445555678887766554 36777888888888863 2233444432110 11222 46666666654211
Q ss_pred ceeeecCCCC---------CHh--------hHHHHHh-cCCcEEeecccccHHHHHHHhcCCC----cEEecccccceec
Q 025169 114 QITLHCGEIP---------NKE--------EIQSMLD-FLPQRIGHACCFEEEEWRKLKSSKI----PVEICLTSNIRTE 171 (257)
Q Consensus 114 ~v~~Ha~E~~---------~~~--------~i~~~l~-lg~~ri~Hg~~l~~~~~~~l~~~~i----~v~~cP~SN~~l~ 171 (257)
++. =.||.+ +.+ .+.-|.+ ++.-.+-|+....++.+++|++.+. .|.||=+.+.
T Consensus 130 ~vv-AIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~~d~l~iL~~~~~~~~~gViH~FsGs~--- 205 (325)
T 3ipw_A 130 KVV-AIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSWSDLCQLNKELGYNGCKGVVHCFDGTE--- 205 (325)
T ss_dssp GEE-EEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCHHHHHHHHHHTTCTTSCEEECSCCCCH---
T ss_pred CEE-EEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchHHHHHHHHHhcCCCCCcEEEEECCCCH---
Confidence 111 124432 111 1334556 7777899999888899999987652 3667744322
Q ss_pred cccCCCcccHHHHHhcCCCEEecC
Q 025169 172 TISSLDIHHFVDLYKAQHPLVLCT 195 (257)
Q Consensus 172 ~~~~~~~~pi~~l~~~Gv~v~lgT 195 (257)
.-..++++.|.-+++|.
T Consensus 206 -------e~a~~~l~lG~yis~~G 222 (325)
T 3ipw_A 206 -------EEMNQILNEGWDIGVTG 222 (325)
T ss_dssp -------HHHHHHHHTTCEEEECS
T ss_pred -------HHHHHHHhcCcEEeeCc
Confidence 23578899999999986
No 134
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=83.12 E-value=5.5 Score=32.74 Aligned_cols=89 Identities=8% Similarity=0.012 Sum_probs=58.0
Q ss_pred CCChhcHHHHHHHHHHcCC------ceeeecCCCCCHhhHHHHHhcCCcEEee--cccc-cHHHHHHHhcCCCcEEeccc
Q 025169 95 KGEWTTFLPALKFAREQGL------QITLHCGEIPNKEEIQSMLDFLPQRIGH--ACCF-EEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl------~v~~Ha~E~~~~~~i~~~l~lg~~ri~H--g~~l-~~~~~~~l~~~~i~v~~cP~ 165 (257)
..+|....++.+.|+++|+ ++..=+ ..+.++..++++|++.+-= +-.+ .++.++.++.-=-.+.+||+
T Consensus 89 ivsP~~~~evi~~~~~~~v~~~~~~~~~PG~---~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i~~~pt 165 (217)
T 3lab_A 89 IVSPGLTPELIEKAKQVKLDGQWQGVFLPGV---ATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQFCPT 165 (217)
T ss_dssp EEESSCCHHHHHHHHHHHHHCSCCCEEEEEE---CSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEEB
T ss_pred EEeCCCcHHHHHHHHHcCCCccCCCeEeCCC---CCHHHHHHHHHcCCCEEEECccccccCHHHHHHHHhhhcCceEEEe
Confidence 3455556678888999999 888766 3578888899999987631 1111 24566666543223566776
Q ss_pred ccceeccccCCCcccHHHHHhcCCCEEec
Q 025169 166 SNIRTETISSLDIHHFVDLYKAQHPLVLC 194 (257)
Q Consensus 166 SN~~l~~~~~~~~~pi~~l~~~Gv~v~lg 194 (257)
--. ....+.++++.|.-+++|
T Consensus 166 GGI--------~~~N~~~~l~aGa~~~vg 186 (217)
T 3lab_A 166 GGI--------SKDNYKEYLGLPNVICAG 186 (217)
T ss_dssp SSC--------CTTTHHHHHHSTTBCCEE
T ss_pred CCC--------CHHHHHHHHHCCCEEEEE
Confidence 432 224689999999755544
No 135
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=82.71 E-value=5.9 Score=37.34 Aligned_cols=87 Identities=15% Similarity=0.084 Sum_probs=52.3
Q ss_pred HHHhcC-CcEEeeccc----------cc-HHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCC
Q 025169 130 SMLDFL-PQRIGHACC----------FE-EEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDD 197 (257)
Q Consensus 130 ~~l~lg-~~ri~Hg~~----------l~-~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~ 197 (257)
.++..| .+.++|-.. .+ ++.++.+++.|+.++++-.+.. .+ ....-+..+.+ |+++++|||.
T Consensus 444 ~ai~~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g~~lEIN~~~~r-~~----~~~~~~~~a~e-Gl~i~igSDA 517 (578)
T 2w9m_A 444 RAVSHPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANGTVVEINANAAR-LD----LDWREALRWRE-RLKFAINTDA 517 (578)
T ss_dssp HHHTCSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHTCEEEEECSTTT-CB----SCHHHHHHHTT-TCCEEEECCC
T ss_pred HHHhcCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCCCEEEEECCCCC-cC----cHHHHHHHHHc-CCEEEEECCC
Confidence 344333 578888642 22 3478888899999999766532 11 11222455667 9999999996
Q ss_pred CCCCCCChHHHHHHHHHhCCCCHHH
Q 025169 198 SGVFSTSVSREYDLAASAFSLGRRE 222 (257)
Q Consensus 198 ~~~~~~~l~~E~~~a~~~~~ls~~~ 222 (257)
=.......+++....++..|++..+
T Consensus 518 H~~~~~~~~~~~~~~~~~~g~~~~~ 542 (578)
T 2w9m_A 518 HVPGGLRDARYGVMQARKAGLTPAH 542 (578)
T ss_dssp SSGGGGGGHHHHHHHHHHTTCCGGG
T ss_pred CChhhcchHHHHHHHHHHcCCCHHH
Confidence 5444332255555555556654433
No 136
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=82.02 E-value=8.8 Score=33.22 Aligned_cols=142 Identities=12% Similarity=0.153 Sum_probs=74.1
Q ss_pred hcccCCCcEEEEEEEeeCCCCHHHHHHHHHH-HHhhCCCc--eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCC
Q 025169 45 NGTRGKKIYVRLLLSIDRRETTEAAMETVKL-ALEMRDLG--VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE 121 (257)
Q Consensus 45 ~a~~~~gir~~li~~~~r~~~~e~~~~~~~~-~~~~~~~~--vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E 121 (257)
.++++.++-+.|=+.-- .+.+.+.+.++. ..+...++ -|-+|.+.-+..-..+..+++++.|+..|+.|-.=.|.
T Consensus 76 ~~A~~~~VPVaLHlDHg--~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~ 153 (306)
T 3pm6_A 76 SACRAASVPITLHLDHA--QDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGR 153 (306)
T ss_dssp HHHHHCSSCEEEEEEEE--CCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSB
T ss_pred HHHHHCCCCEEEEcCCC--CCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeee
Confidence 34445566554443322 245555555442 11112223 24444443232223466778899999998888765543
Q ss_pred CC-----------------CHhhHHHHHhcCCcEE------eecccc------cHHHHHHHhcC---CCcEEecccccce
Q 025169 122 IP-----------------NKEEIQSMLDFLPQRI------GHACCF------EEEEWRKLKSS---KIPVEICLTSNIR 169 (257)
Q Consensus 122 ~~-----------------~~~~i~~~l~lg~~ri------~Hg~~l------~~~~~~~l~~~---~i~v~~cP~SN~~ 169 (257)
.. +|++..+.++.|+|.+ .||.|- +.+.++.+.+. ++++++==.|
T Consensus 154 igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgS--- 230 (306)
T 3pm6_A 154 IEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGAD--- 230 (306)
T ss_dssp CCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCT---
T ss_pred eccccCCccccccccccCCCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCC---
Confidence 32 2334444445677765 488763 44555555543 4555433222
Q ss_pred eccccCCCcccHHHHHhcCC-CEEecCC
Q 025169 170 TETISSLDIHHFVDLYKAQH-PLVLCTD 196 (257)
Q Consensus 170 l~~~~~~~~~pi~~l~~~Gv-~v~lgTD 196 (257)
+....-|++..+.|| +|-++||
T Consensus 231 -----G~p~e~i~~ai~~GV~KiNi~Td 253 (306)
T 3pm6_A 231 -----PFTKEIFEKCIERGVAKVNVNRA 253 (306)
T ss_dssp -----TCCHHHHHHHHHTTEEEEEESHH
T ss_pred -----CCCHHHHHHHHHcCCeEEEeChH
Confidence 223345788888887 4777776
No 137
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=81.88 E-value=19 Score=29.22 Aligned_cols=92 Identities=10% Similarity=0.005 Sum_probs=62.7
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCC
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTK 95 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~ 95 (257)
.+.++|++.... ..+.+ ++-+++..+..++.|+++..+..... ...+...+.++.+.....+.++. .. +
T Consensus 43 G~~~vEl~~~~~---~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~-~p-~---- 111 (257)
T 3lmz_A 43 DIHYLCIKDFHL---PLNST-DEQIRAFHDKCAAHKVTGYAVGPIYM-KSEEEIDRAFDYAKRVGVKLIVG-VP-N---- 111 (257)
T ss_dssp TCCEEEECTTTS---CTTCC-HHHHHHHHHHHHHTTCEEEEEEEEEE-CSHHHHHHHHHHHHHHTCSEEEE-EE-C----
T ss_pred CCCEEEEecccC---CCCCC-HHHHHHHHHHHHHcCCeEEEEecccc-CCHHHHHHHHHHHHHhCCCEEEe-cC-C----
Confidence 478999987611 11122 33455666777889998765544332 45677788888888887765553 21 1
Q ss_pred CChhcHHHHHHHHHHcCCceeeecC
Q 025169 96 GEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
.+.++++.+.|+++|+.+.+|..
T Consensus 112 --~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 112 --YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp --GGGHHHHHHHHHHHTCEEEEECC
T ss_pred --HHHHHHHHHHHHHcCCEEEEecC
Confidence 46789999999999999888865
No 138
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=80.35 E-value=12 Score=33.72 Aligned_cols=132 Identities=13% Similarity=0.128 Sum_probs=78.2
Q ss_pred cHHHHHHHHHHcCCceee-ecCCCCCHhhHHHHHhc--CCcEEeecc---------cccHHHHHHHhcCCCcEEeccccc
Q 025169 100 TFLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDF--LPQRIGHAC---------CFEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 100 ~~~~~~~~A~~~gl~v~~-Ha~E~~~~~~i~~~l~l--g~~ri~Hg~---------~l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
.=+++++...+.|+.|-+ |++ ....++++++ .|-.+.|.. .++++.++.++++|=.|-+|-.+.
T Consensus 172 fG~~vV~eMNrlGmiVDlSH~s----~~t~~dvl~~S~~PvIaSHSnaral~~hpRNl~De~lkala~~GGVIgvnf~~~ 247 (400)
T 3id7_A 172 FGREVVREMNREGMLVDLSHVA----ATTMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPK 247 (400)
T ss_dssp HHHHHHHHHHHHTCEEECTTBC----HHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHTTHHHHTCEEEECCCHH
T ss_pred HHHHHHHHHHHcCCeEEcCCCC----HHHHHHHHHhCCCCEEEecCCccccCCCCCCCCHHHHHHHHHcCCEEEEecchh
Confidence 347788888888988764 664 4566788874 344555653 468999999999986665554433
Q ss_pred ceecc----------------ccC-------------------CCcccHHHHHh--------cCC-CEEecCCCCCC---
Q 025169 168 IRTET----------------ISS-------------------LDIHHFVDLYK--------AQH-PLVLCTDDSGV--- 200 (257)
Q Consensus 168 ~~l~~----------------~~~-------------------~~~~pi~~l~~--------~Gv-~v~lgTD~~~~--- 200 (257)
+.... .++ ....++..+.+ .|+ .|+||||=.+.
T Consensus 248 Fl~~~~~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~atl~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~ 327 (400)
T 3id7_A 248 FVLQAAVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRPVATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFT 327 (400)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTCCTTCCSHHHHHHHHHHHHHSCCCCCBHHHHHHHHHHHHHHHCGGGEEECCCBTTCSCC
T ss_pred hccCcccchhhhhhhhhhhccccccccchhhhhhhhhhhhccCCCCCCHHHHHHHHHHHHHhcCCceEEECCCCCCCCCC
Confidence 22100 000 01233444433 477 59999993221
Q ss_pred ----CCCChHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcC
Q 025169 201 ----FSTSVSREYDLAASAFSLGRREMFQLA-KSAVKFIF 235 (257)
Q Consensus 201 ----~~~~l~~E~~~a~~~~~ls~~~v~~~~-~n~~~~~~ 235 (257)
.+.+-+-.+.......|+|.+|+.++. .|-++..-
T Consensus 328 P~gl~dvs~~p~L~~~L~~rG~se~di~ki~g~N~lRvl~ 367 (400)
T 3id7_A 328 PDGLGDVSGYPNLIAELLDRGWSQSDLAKLTWKNAVRVLD 367 (400)
T ss_dssp CBTCSSTTCHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHhHHHHHH
Confidence 121112222222233699999999986 78877664
No 139
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=80.34 E-value=2.8 Score=35.99 Aligned_cols=188 Identities=9% Similarity=-0.029 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHH-HHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE-eec
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLP-ALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI-GHA 142 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~-~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~Hg 142 (257)
+.+.++..++.+.+.+.+.++.+...+..+. ..+.+.. +...|++.++||.+|..=..+.+.+..+++.|-+.+ -=|
T Consensus 27 n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~-g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDg 105 (286)
T 1gvf_A 27 NAETIQAILEVCSEMRSPVILAGTPGTFKHI-ALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDG 105 (286)
T ss_dssp SHHHHHHHHHHHHHHTCCCEEEECTTHHHHS-CHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCEEEECC
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhhc-CHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCCeEEECC
Confidence 4677788888888888776777654322222 3344444 345567789999999854445678888998887653 112
Q ss_pred ccc--------cHHHHHHHhcCCCcEEecccccce--ecc----ccCCCccc--HHHHH-hcCCC---EEecCCCCCCC-
Q 025169 143 CCF--------EEEEWRKLKSSKIPVEICLTSNIR--TET----ISSLDIHH--FVDLY-KAQHP---LVLCTDDSGVF- 201 (257)
Q Consensus 143 ~~l--------~~~~~~~l~~~~i~v~~cP~SN~~--l~~----~~~~~~~p--i~~l~-~~Gv~---v~lgTD~~~~~- 201 (257)
-.+ +.+.+++....|+.||--...=-. -+. -...-+.| ..++. +-||- |++||==...-
T Consensus 106 S~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~ 185 (286)
T 1gvf_A 106 SHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSK 185 (286)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSCCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccCcCC
Confidence 222 345678888889998764432100 000 00011334 44555 34653 55555422111
Q ss_pred ----CCChHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHh
Q 025169 202 ----STSVSREYDLAASA-------FSLGRREMFQLAKSAVKFIFANGRVKEDLKEIFDLAEK 253 (257)
Q Consensus 202 ----~~~l~~E~~~a~~~-------~~ls~~~v~~~~~n~~~~~~~~~~~k~~l~~~~~~~~~ 253 (257)
+.+++++++..... .|++.+++.+...+|+.=.-++.+.+..+.+.+.+.+.
T Consensus 186 ~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~ 248 (286)
T 1gvf_A 186 TPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFA 248 (286)
T ss_dssp CCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHH
Confidence 12444555444321 25777777777777776666677766666666655543
No 140
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=80.00 E-value=5.5 Score=35.29 Aligned_cols=134 Identities=13% Similarity=0.159 Sum_probs=67.9
Q ss_pred cHHH--HH---HHHHHcCCceeeecCCCC--------CHhhHHHHHh--cCC---cEEeecccccHHHHHHHhc--CCCc
Q 025169 100 TFLP--AL---KFAREQGLQITLHCGEIP--------NKEEIQSMLD--FLP---QRIGHACCFEEEEWRKLKS--SKIP 159 (257)
Q Consensus 100 ~~~~--~~---~~A~~~gl~v~~Ha~E~~--------~~~~i~~~l~--lg~---~ri~Hg~~l~~~~~~~l~~--~~i~ 159 (257)
.+.. ++ +.|.++|+++.+|.+... .+..+...++ -.+ -.+.||.....+ +..+.+ .++.
T Consensus 205 ~~~p~~l~~~~e~a~e~glpv~iH~g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~Hg~~~~~~-~~~l~~~~~nvy 283 (376)
T 2qpx_A 205 PLIDYMLYHVAPFIIAQDMPLQFHVGYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLHCYPYHRE-AGYLASVFPNLY 283 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEESCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEECTTCHHH-HHHHHHHSTTEE
T ss_pred hHhHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEECCCccHHH-HHHHHHhCCCEE
Confidence 4555 55 999999999999998631 1233444444 222 347896533333 444443 3444
Q ss_pred EEecccccceeccccCCCcccHHHHHhcC--CCEEecCCCCCCCCCC-h-HHHH-HHHHHh---CCCCHHH-----HHHH
Q 025169 160 VEICLTSNIRTETISSLDIHHFVDLYKAQ--HPLVLCTDDSGVFSTS-V-SREY-DLAASA---FSLGRRE-----MFQL 226 (257)
Q Consensus 160 v~~cP~SN~~l~~~~~~~~~pi~~l~~~G--v~v~lgTD~~~~~~~~-l-~~E~-~~a~~~---~~ls~~~-----v~~~ 226 (257)
+..+. .... . ++-....+..+++.. =++-+|||.|...... + ...+ +..... .+++..+ +.++
T Consensus 284 ~d~s~-~~~~-~--~~~~~~~l~~l~~~~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~~~~~ls~~~~~~~~~~~I 359 (376)
T 2qpx_A 284 FDISL-LDNL-G--PSGASRVFNEAVELAPYTRILFASDASTYPEMYGLAARQFKQALVAHFNQLPFVDLAQKKAWINAI 359 (376)
T ss_dssp EECTT-HHHH-S--GGGHHHHHHHHTSSSCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred Eeccc-cccc-C--hhhHHHHHHHHHHhcCCCCEEEECCCCccchhhcccHHHHHHHHHHHHcccCcchhhcCHHHHHHH
Confidence 43322 1100 0 000012355665553 3688999998632000 1 1111 111222 4676555 6666
Q ss_pred H-HHHHHHcCCCh
Q 025169 227 A-KSAVKFIFANG 238 (257)
Q Consensus 227 ~-~n~~~~~~~~~ 238 (257)
. .|+.+...++.
T Consensus 360 ~~~NA~rlf~l~~ 372 (376)
T 2qpx_A 360 CWQTSAKLYHQER 372 (376)
T ss_dssp HTHHHHHHTTCGG
T ss_pred HHHhHHHHhCCCC
Confidence 4 78888776643
No 141
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=79.62 E-value=19 Score=29.35 Aligned_cols=108 Identities=10% Similarity=0.043 Sum_probs=67.3
Q ss_pred ccceeeeeccCc---ccc----ccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEe
Q 025169 16 AVSAVDVDFASR---SID----VRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGID 88 (257)
Q Consensus 16 ~v~y~E~r~~p~---~~~----~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~ 88 (257)
.+.++|++..+. .|. ....+ ++-+++..+..++.|+++..+..... ...+...+.++.+.....+.++. .
T Consensus 35 G~~~vEl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~-~ 111 (262)
T 3p6l_A 35 GLKYIEIYPGHKLGGKWGDKVFDFNLD-AQTQKEIKELAASKGIKIVGTGVYVA-EKSSDWEKMFKFAKAMDLEFITC-E 111 (262)
T ss_dssp TCCEEEECTTEECCGGGTTCEESTTCC-HHHHHHHHHHHHHTTCEEEEEEEECC-SSTTHHHHHHHHHHHTTCSEEEE-C
T ss_pred CCCEEeecCCcccccccccccccccCC-HHHHHHHHHHHHHcCCeEEEEeccCC-ccHHHHHHHHHHHHHcCCCEEEe-c
Confidence 478999987632 110 11122 33455666778889999866654433 34566778888888776654433 2
Q ss_pred ccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCC----CHhhHHHHHh
Q 025169 89 LSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP----NKEEIQSMLD 133 (257)
Q Consensus 89 l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~----~~~~i~~~l~ 133 (257)
. ..+.++.+.+.|+++|+.+.+|..-.. .++.+.+.++
T Consensus 112 ~-------~~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~ 153 (262)
T 3p6l_A 112 P-------ALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAIS 153 (262)
T ss_dssp C-------CGGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHT
T ss_pred C-------CHHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHH
Confidence 1 136789999999999999888864221 2344555554
No 142
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=79.43 E-value=14 Score=31.26 Aligned_cols=59 Identities=12% Similarity=0.172 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEee--cccccHHHHHHHhcCCCcEEec
Q 025169 102 LPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH--ACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 102 ~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~H--g~~l~~~~~~~l~~~~i~v~~c 163 (257)
.++++..++.++++.+-. ..++-.+.+++.|++.|-- |-..+|+-++.+++.+++++++
T Consensus 71 ~pvi~~l~~~~v~iSIDT---~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlM 131 (270)
T 4hb7_A 71 LPVVEAIVGFDVKISVDT---FRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILM 131 (270)
T ss_dssp HHHHHHHTTSSSEEEEEC---SCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhhcCCCeEEEEC---CCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEe
Confidence 345666666788888765 4566667889999988753 4455889999999999998765
No 143
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=79.08 E-value=25 Score=28.77 Aligned_cols=85 Identities=14% Similarity=-0.024 Sum_probs=47.9
Q ss_pred hhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe---eccc-------ccHHHHHHHhcCCCcEEeccccc
Q 025169 98 WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG---HACC-------FEEEEWRKLKSSKIPVEICLTSN 167 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~---Hg~~-------l~~~~~~~l~~~~i~v~~cP~SN 167 (257)
|+.+.+.++.+++.|+.+..=+ ...++...+.++|++.|+ ||+. .+-+.++.+++.++++. ..+.
T Consensus 115 p~~l~~~i~~~~~~g~~v~~~v---~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvI--A~GG 189 (229)
T 3q58_A 115 PVDIDSLLTRIRLHGLLAMADC---STVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVI--AEGR 189 (229)
T ss_dssp SSCHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEE--EESS
T ss_pred hHHHHHHHHHHHHCCCEEEEec---CCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEE--EECC
Confidence 4577778888888887766533 346666677778888774 4431 12345566665554443 2221
Q ss_pred ceeccccCCCcccHHHHHhcCCC-EEec
Q 025169 168 IRTETISSLDIHHFVDLYKAQHP-LVLC 194 (257)
Q Consensus 168 ~~l~~~~~~~~~pi~~l~~~Gv~-v~lg 194 (257)
... ...+.++++.|.. |.+|
T Consensus 190 I~t-------~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 190 YNT-------PALAANAIEHGAWAVTVG 210 (229)
T ss_dssp CCS-------HHHHHHHHHTTCSEEEEC
T ss_pred CCC-------HHHHHHHHHcCCCEEEEc
Confidence 111 1236777777654 3444
No 144
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=78.55 E-value=32 Score=29.70 Aligned_cols=167 Identities=13% Similarity=0.034 Sum_probs=91.0
Q ss_pred cCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHH-------hhCCCceEEEeccCCCCCCC---h---
Q 025169 32 RRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLAL-------EMRDLGVVGIDLSGNPTKGE---W--- 98 (257)
Q Consensus 32 ~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~-------~~~~~~vvg~~l~g~~~~~~---~--- 98 (257)
-|-+.+++++.+.+ ..+.|+++.+=+..---.+.+++.+..+... +.....-+.+.+.+-....+ +
T Consensus 38 aGet~~ea~~~~~~-l~~~G~~~~ld~lGE~~~~~~eA~~~~~~yl~~i~~i~~~~~~~~vSvKlSalg~~~~~~~~~~~ 116 (312)
T 4h6q_A 38 AGESIESAIQAVQA-LERDGIAGNLDLLGEFIDSPAKCTEFADDVIKLIEAAHAAGIKPYVSIKLSSVGQGKDENGEDLG 116 (312)
T ss_dssp CCSSHHHHHHHHHH-HHHTTCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGTTTTCEETTEEHH
T ss_pred CcCCHHHHHHHHHH-HHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEehhhcccccCcccHHHH
Confidence 46677777755443 3445887444332222235555544333222 11222356666653211122 2
Q ss_pred -hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-----cCCcEEeeccc--c--cHHHHHHHhcCCCcEEecccccc
Q 025169 99 -TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-----FLPQRIGHACC--F--EEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 99 -~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-----lg~~ri~Hg~~--l--~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
+.+.++++.|++.|+.+++-+.|+...+.+.+... ++-..++=-++ + ++++++.+.+.++.+=+|-..++
T Consensus 117 ~~~l~~i~~~A~~~~v~v~iDaEe~~~~~~tl~~~~~l~~~~~~~~vg~t~QaYlkrt~~~l~~l~~~~~~vRLVKGAY~ 196 (312)
T 4h6q_A 117 LTNARRIIAKAKEYGGFICLDMEDHTRVDVTLEQFRTLVGEFGAEHVGTVLQSYLYRSLGDRASLDDLRPNIRMVKGAYL 196 (312)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCSGGGHHHHHHHHHHHHHHHCTTTEEEEEETTBTTHHHHHHHTGGGCCCEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCEEEEccCcccchHHHHHHHHHHHHHcCCCcEEEEeehhccccHHHHHHHHhcCCCeEEecCccc
Confidence 44778899999999999999877643333222221 13233332222 2 57888888887777666655554
Q ss_pred eecc--ccCCC------cccHHHHHhcCCCEEecCCCCC
Q 025169 169 RTET--ISSLD------IHHFVDLYKAQHPLVLCTDDSG 199 (257)
Q Consensus 169 ~l~~--~~~~~------~~pi~~l~~~Gv~v~lgTD~~~ 199 (257)
-... +++.. ..-+..+++.++.+.++|-|+-
T Consensus 197 e~E~~~~~~k~~tD~~Y~~~~~~ll~~~~~~~vATHN~~ 235 (312)
T 4h6q_A 197 EPATVAYPDKADVDQNYRRLVFQHLKAGNYTNVATHDER 235 (312)
T ss_dssp CCTTTBCSSHHHHHHHHHHHHHHHHHTTCCEEEECCCHH
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHhCCCceeEecCCHH
Confidence 3221 00000 1126778889999999998864
No 145
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=78.27 E-value=1.9 Score=36.78 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=33.0
Q ss_pred HHHHHHhcCCCcEEecccccceecccc-CC-CcccHHHHHhcCCCEEecCCC
Q 025169 148 EEWRKLKSSKIPVEICLTSNIRTETIS-SL-DIHHFVDLYKAQHPLVLCTDD 197 (257)
Q Consensus 148 ~~~~~l~~~~i~v~~cP~SN~~l~~~~-~~-~~~pi~~l~~~Gv~v~lgTD~ 197 (257)
+.++.++++|+.++++-.|-.. .... .+ ...-++.+.+.|+++++|||.
T Consensus 209 ~il~~~~~~g~~lEiN~~~l~~-~~~~~~yp~~~~~~~~~~~g~~i~igSDA 259 (283)
T 3dcp_A 209 VILALVKKRDYELDFNTAGLFK-PLCGETYPPKKIVTLASELQIPFVYGSDS 259 (283)
T ss_dssp HHHHHHHHHTCEEEEECGGGGS-TTCCSCBSCHHHHHHHHHTTCCEEEECCB
T ss_pred HHHHHHHHcCCEEEEechHhcC-CCCCCcCCHHHHHHHHHHcCCCEEEEcCC
Confidence 4578889999999998766332 1000 00 111256678999999999995
No 146
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=78.13 E-value=19 Score=36.88 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=65.5
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC--------CCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHH
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR--------ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAR 109 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~--------~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~ 109 (257)
+.+...++.+++.|..+...+|+.-+ .+++...+.++.+.+...+.+.=-|..| ...|..+.++++..+
T Consensus 672 ~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~ 748 (1165)
T 2qf7_A 672 ENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAG---LLKPAAAKVLFKALR 748 (1165)
T ss_dssp GGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccC---CcCHHHHHHHHHHHH
Confidence 35555666667778777766654421 3567777777777766555343345555 346777777777765
Q ss_pred H-cCCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 110 E-QGLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 110 ~-~gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+ .++++.+|+.-+.+- .+...+++.|++.+.
T Consensus 749 ~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd 782 (1165)
T 2qf7_A 749 EATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVD 782 (1165)
T ss_dssp HHCSSCEEEEECBTTSCHHHHHHHHHHTTCSEEE
T ss_pred HhcCCeEEEEECCCCCHHHHHHHHHHHhCCCEEE
Confidence 5 489999999876653 345677888988763
No 147
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=76.28 E-value=5 Score=34.49 Aligned_cols=185 Identities=9% Similarity=0.011 Sum_probs=110.3
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHH-HHH--HcCCceeeecCCCCCHhhHHHHHhcCCcEE-e
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALK-FAR--EQGLQITLHCGEIPNKEEIQSMLDFLPQRI-G 140 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~-~A~--~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~ 140 (257)
+.+.++..++.+.+.+.+.++.+...+..+....+.+..++. .|+ +.++||.+|..=..+.+.+..+++.|-+.+ -
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMi 109 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMI 109 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEE
Confidence 467777888888887777677765433233223445555544 566 679999999854445678888998887653 1
Q ss_pred ecccc--------cHHHHHHHhcCCCcEEecccccceecccc-------CCCccc--HHHHH-hcCCC---EEecCCCCC
Q 025169 141 HACCF--------EEEEWRKLKSSKIPVEICLTSNIRTETIS-------SLDIHH--FVDLY-KAQHP---LVLCTDDSG 199 (257)
Q Consensus 141 Hg~~l--------~~~~~~~l~~~~i~v~~cP~SN~~l~~~~-------~~~~~p--i~~l~-~~Gv~---v~lgTD~~~ 199 (257)
=|-.+ +.+.+++....|+.||--... ++... ..-+.| ..++. +-||- |++||==..
T Consensus 110 DgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~---vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~ 186 (288)
T 3q94_A 110 DASHHPFEENVETTKKVVEYAHARNVSVEAELGT---VGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGP 186 (288)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESB---CBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSC
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeee---eccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCC
Confidence 12222 345678888899988754321 11100 012234 45555 35663 666664211
Q ss_pred CC-----CCChHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 025169 200 VF-----STSVSREYDLAASA-------FSLGRREMFQLAKSAVKFIFANGRVKEDLKEIFDLAE 252 (257)
Q Consensus 200 ~~-----~~~l~~E~~~a~~~-------~~ls~~~v~~~~~n~~~~~~~~~~~k~~l~~~~~~~~ 252 (257)
.- +.+++++++..... .|++.+++.+...+|+.=.-++.+.+..+.+.+.+.+
T Consensus 187 Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~ 251 (288)
T 3q94_A 187 YKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVL 251 (288)
T ss_dssp CSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHHH
Confidence 11 12455565555431 3678888888877777777777777777666666554
No 148
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=75.99 E-value=15 Score=36.31 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=43.0
Q ss_pred hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeee
Q 025169 39 NMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLH 118 (257)
Q Consensus 39 ~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~H 118 (257)
.+.....+...+++...+....... .++...+.. +. +..++.... .+..++..+..+++.|+++|..+.+|
T Consensus 449 ~~~~~l~a~~~~~vn~g~~~~~~~~-~~~~L~el~----~a---Ga~g~K~~~-~~~~t~~~i~~aL~~A~e~g~~V~ih 519 (840)
T 4gy7_A 449 QMRLMLQSTDDLPLNFGFTGKGSSS-KPDELHEII----KA---GAMGLKLHE-DWGSTPAAIDNCLTIAEHHDIQINIH 519 (840)
T ss_dssp HHHHHHHHTTTSSSEEEEEEECCCS-SSHHHHHHH----HH---TCSEEEEET-TTCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhhhhcceeEEEEeCCCCcc-cHHHHHHhh----hc---eeeEEEecc-ccCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 3444556666777766554333332 223222221 11 234444433 23446788999999999999999999
Q ss_pred cCC
Q 025169 119 CGE 121 (257)
Q Consensus 119 a~E 121 (257)
...
T Consensus 520 ~e~ 522 (840)
T 4gy7_A 520 TDT 522 (840)
T ss_dssp CCT
T ss_pred ccC
Confidence 753
No 149
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=75.52 E-value=4.4 Score=33.47 Aligned_cols=50 Identities=12% Similarity=0.047 Sum_probs=31.8
Q ss_pred HHHHHHhcCCCcEEecccccceeccccCCC-cccHHHHHhcCCCEEecCCCC
Q 025169 148 EEWRKLKSSKIPVEICLTSNIRTETISSLD-IHHFVDLYKAQHPLVLCTDDS 198 (257)
Q Consensus 148 ~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~-~~pi~~l~~~Gv~v~lgTD~~ 198 (257)
+.++.+++.|+.++++-.+... ..-..+. ..-+..+.+.|+++++|||.=
T Consensus 176 ~~l~~~~~~g~~iEvn~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~gSDaH 226 (267)
T 2yxo_A 176 PALRAVAEAGLFLDVNTAGLRR-PAKEVYPAPALLRRARELGIGLVLGSDAH 226 (267)
T ss_dssp HHHHHHHHHTCEEEEEGGGGGS-TTCSCBSCHHHHHHHHHHTCCEEEECCBS
T ss_pred HHHHHHHHcCCEEEEEchHhcC-CCCCCCCCHHHHHHHHHcCCCEEEecCCC
Confidence 4577888899999997655321 1000001 112556778999999999953
No 150
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=75.03 E-value=40 Score=29.05 Aligned_cols=142 Identities=17% Similarity=0.151 Sum_probs=76.9
Q ss_pred EEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCC----------------HhhHHHHHh-cCCcEE------ee
Q 025169 85 VGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPN----------------KEEIQSMLD-FLPQRI------GH 141 (257)
Q Consensus 85 vg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~----------------~~~i~~~l~-lg~~ri------~H 141 (257)
|-+|.+.-++.-..+..+++++.|+..|+.|-.=.|...+ |++..+.++ .|+|.+ .|
T Consensus 101 VMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~H 180 (307)
T 3n9r_A 101 VMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSH 180 (307)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCS
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcc
Confidence 4455443332223466788999999999988876654432 333334343 588876 59
Q ss_pred cccc-------cHHHHHHHhcC-CCcEEecccc----------cceecccc---CCCcccHHHHHhcCC-CEEecCCCCC
Q 025169 142 ACCF-------EEEEWRKLKSS-KIPVEICLTS----------NIRTETIS---SLDIHHFVDLYKAQH-PLVLCTDDSG 199 (257)
Q Consensus 142 g~~l-------~~~~~~~l~~~-~i~v~~cP~S----------N~~l~~~~---~~~~~pi~~l~~~Gv-~v~lgTD~~~ 199 (257)
|.|- +.+.++.+++. ++++++==.| |..-+.++ +....-|++..+.|| +|-++||-..
T Consensus 181 G~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~ 260 (307)
T 3n9r_A 181 GAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRI 260 (307)
T ss_dssp SSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred cccCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEechHHHH
Confidence 9763 45556655433 5777665555 11111111 223334788888887 5778887321
Q ss_pred CCCCChHHHHHHHHHh--CCCCHHHHHHHHHHH
Q 025169 200 VFSTSVSREYDLAASA--FSLGRREMFQLAKSA 230 (257)
Q Consensus 200 ~~~~~l~~E~~~a~~~--~~ls~~~v~~~~~n~ 230 (257)
.++..++..... -.+++..+++-++.+
T Consensus 261 ----a~~~~vr~~~~~~~~~~dpr~~~~~~~~a 289 (307)
T 3n9r_A 261 ----AFIAEVRKVANEDKSQFDLRKFFSPAQLA 289 (307)
T ss_dssp ----HHHHHHHHHHHHCTTCCCHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCCCcCCHHHHHHHHHHH
Confidence 122223222221 135666666655544
No 151
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=74.92 E-value=3.5 Score=33.70 Aligned_cols=86 Identities=13% Similarity=0.057 Sum_probs=48.0
Q ss_pred CCcEEeecccc-----cHHHHHHHhcCCCcEEecccccceeccccCCCccc----HHHHHhcCCCEEecCCCCCCCC-CC
Q 025169 135 LPQRIGHACCF-----EEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHH----FVDLYKAQHPLVLCTDDSGVFS-TS 204 (257)
Q Consensus 135 g~~ri~Hg~~l-----~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~p----i~~l~~~Gv~v~lgTD~~~~~~-~~ 204 (257)
+...++|-... .++.++.+++.|+.++++-.+... +... ...| +..+.+.|+++++|||.=.... ..
T Consensus 125 ~~~vlaHp~~~~~~~~~~~~~~~~~~~g~~iEvn~~~~~~-~~~g--~~~~~~~~~~~~~~~g~~~~~gSDaH~~~~~g~ 201 (245)
T 1m65_A 125 NVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLH-SRKG--SEDNCREVAAAVRDAGGWVALGSDSHTAFTMGE 201 (245)
T ss_dssp CCSEECCTTCTTSCCCHHHHHHHHHHHTCEEEEETTC-------------CHHHHHHHHHHHTCCEEEECCBSSGGGTTC
T ss_pred CCCEEECCCCccchhHHHHHHHHHHHcCCEEEEECCCCcc-cCCC--CCCchHHHHHHHHHcCCEEEEECCCCChHHHhh
Confidence 34678886431 246688889999999987665421 1100 0122 3445678999999999533322 23
Q ss_pred hHHHHHHHHHhCCCCHHHHH
Q 025169 205 VSREYDLAASAFSLGRREMF 224 (257)
Q Consensus 205 l~~E~~~a~~~~~ls~~~v~ 224 (257)
+ .+....++.+|++...++
T Consensus 202 ~-~~~~~~~~~~g~~~~~i~ 220 (245)
T 1m65_A 202 F-EECLKILDAVDFPPERIL 220 (245)
T ss_dssp C-HHHHHHHHHTTCCGGGBG
T ss_pred H-HHHHHHHHHCCCCeEEEE
Confidence 3 333333555666555443
No 152
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=74.75 E-value=39 Score=28.82 Aligned_cols=164 Identities=12% Similarity=0.128 Sum_probs=85.0
Q ss_pred HHHHHhh-ccceeeeeccCccccccCCCchh-hhhhHhhcccCCCcEEEEEEEeeCCC------CHHHH---HHHHHHHH
Q 025169 9 AVVEGLR-AVSAVDVDFASRSIDVRRPVNTK-NMNDACNGTRGKKIYVRLLLSIDRRE------TTEAA---METVKLAL 77 (257)
Q Consensus 9 ~~~~~~~-~v~y~E~r~~p~~~~~~~~~~~~-~~~~~~~a~~~~gir~~li~~~~r~~------~~e~~---~~~~~~~~ 77 (257)
.+..+.+ ...-+|+.- .+...|++-+- .++.+.+.. .|.+. .+.|.. +.++. .+-++.+.
T Consensus 51 ~a~~A~~gGAdRIELc~---~l~~GGlTPS~g~i~~a~~~~---~ipV~---vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 51 SAVNAERGGADRIELCS---GLSEGGTTPSMGVLQVVKQSV---QIPVF---VMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp HHHHHHHHTCSEEEECB---CGGGTCBCCCHHHHHHHHTTC---CSCEE---EECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECC---CCCCCCCCCCHHHHHHHHHhc---CCCeE---EEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 3444444 366788882 34467777653 455444432 34433 334532 33443 34445555
Q ss_pred hhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC--CCCCH-hhHHHHHhcCCcE-Eeeccccc----HHH
Q 025169 78 EMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG--EIPNK-EEIQSMLDFLPQR-IGHACCFE----EEE 149 (257)
Q Consensus 78 ~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~--E~~~~-~~i~~~l~lg~~r-i~Hg~~l~----~~~ 149 (257)
+...+++| |+.--.+...+.+..+++.+.|+ ++++|+|-+ +..++ ..+...+++|.+| +-+|-..+ -+.
T Consensus 122 ~~GAdGvV-fG~L~~dg~iD~~~~~~Li~~a~--~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a~~Gl~~ 198 (287)
T 3iwp_A 122 LYGADGLV-FGALTEDGHIDKELCMSLMAICR--PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSALEGLPL 198 (287)
T ss_dssp HTTCSEEE-ECCBCTTSCBCHHHHHHHHHHHT--TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSSTTTTHHH
T ss_pred HcCCCEEE-EeeeCCCCCcCHHHHHHHHHHcC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCChHHhHHH
Confidence 55444422 22111233446677788888765 689999965 33333 3455666789987 56775332 123
Q ss_pred HHHHh-cCCCcEEecccccceeccccCCCcccHHHHHh-cCCCEE
Q 025169 150 WRKLK-SSKIPVEICLTSNIRTETISSLDIHHFVDLYK-AQHPLV 192 (257)
Q Consensus 150 ~~~l~-~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~-~Gv~v~ 192 (257)
++.|. ..+-.+++.|.+-+ ....+.++++ .|+.-.
T Consensus 199 Lk~Lv~~a~~rI~ImaGGGV--------~~~Ni~~l~~~tG~~~~ 235 (287)
T 3iwp_A 199 IKRLIEQAKGRIVVMPGGGI--------TDRNLQRILEGSGATEF 235 (287)
T ss_dssp HHHHHHHHTTSSEEEECTTC--------CTTTHHHHHHHHCCSEE
T ss_pred HHHHHHHhCCCCEEEECCCc--------CHHHHHHHHHhhCCCEE
Confidence 33333 23334455564422 2345677766 676543
No 153
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=73.10 E-value=37 Score=27.71 Aligned_cols=92 Identities=10% Similarity=0.040 Sum_probs=51.0
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCC---------CCH-------HHHHHHHHHHHhh
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRR---------ETT-------EAAMETVKLALEM 79 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~---------~~~-------e~~~~~~~~~~~~ 79 (257)
.+.++|++. |.. .-++++.+..++.|+++..+.+.... .++ +...+.++.+...
T Consensus 36 G~~~vEl~~-~~~---------~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~l 105 (269)
T 3ngf_A 36 GFGGVEFLF-PYD---------FDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALAL 105 (269)
T ss_dssp TCSEEECSC-CTT---------SCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEecC-Ccc---------CCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHc
Confidence 477899876 431 12445556778889987655432110 011 2334555666665
Q ss_pred CCCceEEEeccCCCCCCC--------hhcHHHHHHHHHHcCCceeeec
Q 025169 80 RDLGVVGIDLSGNPTKGE--------WTTFLPALKFAREQGLQITLHC 119 (257)
Q Consensus 80 ~~~~vvg~~l~g~~~~~~--------~~~~~~~~~~A~~~gl~v~~Ha 119 (257)
..+ .+.+.. |.+...+ .+.++++.+.|++.|+.+.+|.
T Consensus 106 Ga~-~v~~~~-g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 106 DCR-TLHAMS-GITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp TCC-EEECCB-CBCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred CCC-EEEEcc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 554 333222 2222222 1345667788889999999984
No 154
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=73.01 E-value=22 Score=31.42 Aligned_cols=138 Identities=13% Similarity=0.141 Sum_probs=73.3
Q ss_pred eeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEee---C-------CCCH----HHHHHHHHHHHhhCCCceEEE
Q 025169 22 VDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID---R-------RETT----EAAMETVKLALEMRDLGVVGI 87 (257)
Q Consensus 22 ~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~---r-------~~~~----e~~~~~~~~~~~~~~~~vvg~ 87 (257)
+|+.|-..- -.+.++++++++++.|+-+|+..-.- + ...+ +.+.+.++.+.++.-+.++ +
T Consensus 109 lRINPGNig-----~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iv-i 182 (366)
T 3noy_A 109 IRINPGNIG-----KEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYK-V 182 (366)
T ss_dssp EEECHHHHS-----CHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEE-E
T ss_pred EEECCcccC-----chhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEE-E
Confidence 677765332 14567788888888998888874322 1 0123 3344555555554322222 2
Q ss_pred eccCCCCCCChhcHHHHH-HHHHHcCCceeeecCCCCCHh--hHHHHHhcCC---cEEeecccc----cH-HHH----HH
Q 025169 88 DLSGNPTKGEWTTFLPAL-KFAREQGLQITLHCGEIPNKE--EIQSMLDFLP---QRIGHACCF----EE-EEW----RK 152 (257)
Q Consensus 88 ~l~g~~~~~~~~~~~~~~-~~A~~~gl~v~~Ha~E~~~~~--~i~~~l~lg~---~ri~Hg~~l----~~-~~~----~~ 152 (257)
.+-. .++.....++ .++++.+.|+|+-+.|..... -++.++.+|. +-||-.+.+ +| +++ ++
T Consensus 183 S~K~----S~v~~~i~ayr~la~~~dyPLHlGvTEAG~~~~G~ikSsigiG~LL~dGIGDTIRVSLt~~p~~Ev~va~~I 258 (366)
T 3noy_A 183 SIKG----SDVLQNVRANLIFAERTDVPLHIGITEAGMGTKGIIKSSVGIGILLYMGIGDTVRVSLTDDPVVEVETAYEI 258 (366)
T ss_dssp EEEC----SSHHHHHHHHHHHHHHCCCCEEECCSSCCSHHHHHHHHHHHHHHHHHTTCCSEECCCCSSCHHHHHHHHHHH
T ss_pred eeec----CChHHHHHHHHHHHhccCCCEEEccCCCCCCcceeeehHHHHHHHHHhcccceEEEeCCCCcHHHHHHHHHH
Confidence 2222 1223333444 456677999988887875432 2344444332 233333322 22 222 22
Q ss_pred -----HhcCCCcEEecccccce
Q 025169 153 -----LKSSKIPVEICLTSNIR 169 (257)
Q Consensus 153 -----l~~~~i~v~~cP~SN~~ 169 (257)
++.+|+-++.||+.-..
T Consensus 259 LqslglR~~g~~~ISCPtCGRt 280 (366)
T 3noy_A 259 LKSLGLRRRGVEIVACPTCGRI 280 (366)
T ss_dssp HHHTTSCCSSCEEEECCCCTTC
T ss_pred HHhcCCCcCCCEEEECCCCCCc
Confidence 24568899999997543
No 155
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=72.84 E-value=32 Score=27.83 Aligned_cols=86 Identities=16% Similarity=0.104 Sum_probs=42.2
Q ss_pred ccccccCCCchhhhhhHhhcccCCCcEEEEEEEe------------eCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCC
Q 025169 27 RSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSI------------DRRETTEAAMETVKLALEMRDLGVVGIDLSGNPT 94 (257)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~------------~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~ 94 (257)
++++..+.+.++.++.+ ++.|+...=+... ....+++...+..+...++.= .+.++.....
T Consensus 15 ~~~~~~~~~~~~~l~~~----~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-~i~~~~~~~~-- 87 (262)
T 3p6l_A 15 QSYSFHLFPLTEALDKT----QELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGI-KIVGTGVYVA-- 87 (262)
T ss_dssp EGGGGTTSCHHHHHHHH----HHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTC-EEEEEEEECC--
T ss_pred EecccCCCCHHHHHHHH----HHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCC-eEEEEeccCC--
Confidence 44444555555555433 3455555433321 112345445555444443321 1333332221
Q ss_pred CCChhcHHHHHHHHHHcCCc-eeeecC
Q 025169 95 KGEWTTFLPALKFAREQGLQ-ITLHCG 120 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~gl~-v~~Ha~ 120 (257)
.+.+.+++.++.|++.|.+ +.+|.+
T Consensus 88 -~~~~~~~~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 88 -EKSSDWEKMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp -SSTTHHHHHHHHHHHTTCSEEEECCC
T ss_pred -ccHHHHHHHHHHHHHcCCCEEEecCC
Confidence 2446788888888888865 555643
No 156
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=72.14 E-value=38 Score=34.64 Aligned_cols=96 Identities=13% Similarity=-0.055 Sum_probs=61.0
Q ss_pred hHhhcccCCCcEEEEEEEeeC---------CCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHH-c
Q 025169 42 DACNGTRGKKIYVRLLLSIDR---------RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-Q 111 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r---------~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~-~ 111 (257)
..++..++.|..+....|..+ ..+++...+.++.+.+...+.+.=-|..| ..+|....++++..++ .
T Consensus 658 ~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G---~~~P~~~~~lv~~l~~~~ 734 (1150)
T 3hbl_A 658 VANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAG---LLKPKAAYELIGELKSAV 734 (1150)
T ss_dssp HHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccC---CCCHHHHHHHHHHHHHhc
Confidence 344555666766665555552 13456667777776666555333335555 3467777777776655 4
Q ss_pred CCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 112 GLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 112 gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
++++++|+.-+.+- .+...+++.|++++.
T Consensus 735 ~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD 765 (1150)
T 3hbl_A 735 DLPIHLHTHDTSGNGLLTYKQAIDAGVDIID 765 (1150)
T ss_dssp CSCEEEEECBTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEE
Confidence 89999999877653 345677788998763
No 157
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=71.90 E-value=5.5 Score=34.49 Aligned_cols=188 Identities=11% Similarity=0.007 Sum_probs=114.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhc--------CC
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF--------LP 136 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~l--------g~ 136 (257)
+.+.++..++.+.+.+.+.++.+.-.+..+. ....+..+...|++.++||.+|..=..+.+.+..++++ |-
T Consensus 36 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~-g~~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GF 114 (306)
T 3pm6_A 36 NLEGILAIIRAAEHKRSPAMILLFPWAIQYA-DSLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSETHEPGF 114 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHH-TTHHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC------CCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhc-cHHHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCC
Confidence 5677788888888877776766653322221 22345566677888999999998544456778888887 65
Q ss_pred cEE-eecccc--------cHHHHHHHhcCCCcEEecccccce--eccc-----cCCCccc--HHHHHhcCCC---EEecC
Q 025169 137 QRI-GHACCF--------EEEEWRKLKSSKIPVEICLTSNIR--TETI-----SSLDIHH--FVDLYKAQHP---LVLCT 195 (257)
Q Consensus 137 ~ri-~Hg~~l--------~~~~~~~l~~~~i~v~~cP~SN~~--l~~~-----~~~~~~p--i~~l~~~Gv~---v~lgT 195 (257)
+.+ -=|-++ +.+.+++....|+.||.-...=-- -+.. ...-+.| ..++.+-||. |++||
T Consensus 115 tSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LAvaiGt 194 (306)
T 3pm6_A 115 DSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLAPAFGN 194 (306)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEECCCSSC
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEEEEEcCc
Confidence 542 112122 345678888999999865432100 0000 0112334 5667777864 66666
Q ss_pred CCCCC----C--CCChHHHHHHHHH--h-------CCCCHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHh
Q 025169 196 DDSGV----F--STSVSREYDLAAS--A-------FSLGRREMFQLAKSAVKFIFANGRVKEDLKEIFDLAEK 253 (257)
Q Consensus 196 D~~~~----~--~~~l~~E~~~a~~--~-------~~ls~~~v~~~~~n~~~~~~~~~~~k~~l~~~~~~~~~ 253 (257)
==... . +.+++++++.... . .|++.+++.+...+|+.=.-++.+.+..+.+.+.+...
T Consensus 195 ~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~~r~~~~ 267 (306)
T 3pm6_A 195 VHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREKAG 267 (306)
T ss_dssp CSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEESHHHHHHHHHHHHHHTT
T ss_pred cccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHhc
Confidence 52111 1 1355677766552 1 36888888888887777666777777766666655443
No 158
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=71.63 E-value=5.1 Score=34.90 Aligned_cols=45 Identities=13% Similarity=-0.059 Sum_probs=31.7
Q ss_pred CChhcHHHHHHHHHH-cCCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 96 GEWTTFLPALKFARE-QGLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~-~gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
.+|..+.++++..++ .++++.+|+.-+.+- .+...+++.|++++.
T Consensus 169 ~~P~~~~~lv~~l~~~~~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd 216 (320)
T 3dxi_A 169 ITPKEVKNLLKEVRKYTHVPVGFHGHDNLQLGLINSITAIDDGIDFID 216 (320)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEECBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCCCccHHHHHHHHHHhCCCEEE
Confidence 367777777776655 478999998766543 345567778988764
No 159
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=71.29 E-value=24 Score=30.18 Aligned_cols=63 Identities=5% Similarity=0.011 Sum_probs=45.1
Q ss_pred hcHHH---HHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe--ecccccHHHHHHHhcCCCcEEeccc
Q 025169 99 TTFLP---ALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG--HACCFEEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 99 ~~~~~---~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~--Hg~~l~~~~~~~l~~~~i~v~~cP~ 165 (257)
+++.+ +++..++.++++.+-. ..++-++.+++.|++.|- .|.. +++.++.+++.|+++++.+.
T Consensus 81 eE~~Rv~pvi~~l~~~~vpiSIDT---~~~~Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 81 EELARVIPLVEALRPLNVPLSIDT---YKPAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp HHHHHHHHHHHHHGGGCSCEEEEC---CCHHHHHHHHHHTCSEEEETTTTC-STTHHHHHSSSSCEEEEECC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEC---CCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCCEEEECC
Confidence 44544 4555554589998865 456777888989997764 2333 67788999999999988775
No 160
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=71.08 E-value=41 Score=27.46 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=25.8
Q ss_pred hhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 98 WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
|+.+.++++.+++.|+.+..=+ ...++...+.++|++.|+
T Consensus 115 p~~l~~~i~~~~~~g~~v~~~v---~t~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 115 PVAVEALLARIHHHHLLTMADC---SSVDDGLACQRLGADIIG 154 (232)
T ss_dssp SSCHHHHHHHHHHTTCEEEEEC---CSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeC---CCHHHHHHHHhCCCCEEE
Confidence 3567777777777777665433 345566666677777764
No 161
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=70.87 E-value=20 Score=31.94 Aligned_cols=109 Identities=12% Similarity=0.146 Sum_probs=66.9
Q ss_pred EEEEEeeCC-CCHHHHHHHHHHHHhhCCCceEEEeccCCCC--CCChhcHHHHHHHHHHcCCceeeecCCCCC------H
Q 025169 55 RLLLSIDRR-ETTEAAMETVKLALEMRDLGVVGIDLSGNPT--KGEWTTFLPALKFAREQGLQITLHCGEIPN------K 125 (257)
Q Consensus 55 ~li~~~~r~-~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~--~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~------~ 125 (257)
++++++--. ...++..+.++.+.++.-..+.. .|...+. ..-.+.|+++.+.|+++|+.+.+-.+-..- .
T Consensus 28 ~LGiSvYp~~~~~~~~~~Yi~~a~~~Gf~~IFT-SL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~ 106 (385)
T 1x7f_A 28 KLGISLYPEHSTKEKDMAYISAAARHGFSRIFT-CLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISY 106 (385)
T ss_dssp EEEEEECGGGSCHHHHHHHHHHHHTTTEEEEEE-EECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------C
T ss_pred heEEEEcCCCCCHHHHHHHHHHHHHCCCCEEEc-cCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCH
Confidence 455565543 34566678888887765443322 2322222 123477999999999999999998863321 1
Q ss_pred hhHHHHHhcCCc--EEeecccccHHHHHHHhcC--CCcEEecccc
Q 025169 126 EEIQSMLDFLPQ--RIGHACCFEEEEWRKLKSS--KIPVEICLTS 166 (257)
Q Consensus 126 ~~i~~~l~lg~~--ri~Hg~~l~~~~~~~l~~~--~i~v~~cP~S 166 (257)
..+....++|.+ |+..|+ +.+++..|... |+.|+++.+.
T Consensus 107 ~dl~~f~~lGi~gLRLD~Gf--~~~eia~ls~n~~glkIeLNASt 149 (385)
T 1x7f_A 107 SDLSFFAELGADGIRLDVGF--DGLTEAKMTNNPYGLKIELNVSN 149 (385)
T ss_dssp CCTHHHHHHTCSEEEESSCC--SSHHHHHHTTCTTCCEEEEETTS
T ss_pred HHHHHHHHcCCCEEEEcCCC--CHHHHHHHhcCCCCCEEEEeCcC
Confidence 233344457875 788877 55677777665 5888887655
No 162
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=69.89 E-value=47 Score=27.77 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc-CCceeeecCCCCCHhhHHHHHhc--CCcEEee
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDF--LPQRIGH 141 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~-gl~v~~Ha~E~~~~~~i~~~l~l--g~~ri~H 141 (257)
+++.+.+..+...+...+ ++.++. |.+.....+++++++...++. ++|+.+-. ..++-+..+++. |++.|--
T Consensus 23 ~~~~a~~~a~~~v~~GAd-iIDIg~-g~~~v~~~ee~~rvv~~i~~~~~~pisIDT---~~~~v~~aAl~a~~Ga~iINd 97 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGAR-ALDLNV-GPAVQDKVSAMEWLVEVTQEVSNLTLCLDS---TNIKAIEAGLKKCKNRAMINS 97 (262)
T ss_dssp CHHHHHHHHHHHHHHTCS-EEEEBC-C----CHHHHHHHHHHHHHTTCCSEEEEEC---SCHHHHHHHHHHCSSCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCc-EEEECC-CCCCCChHHHHHHHHHHHHHhCCCeEEEeC---CCHHHHHHHHhhCCCCCEEEE
Confidence 344444443333333333 554443 222223457788877776665 77877754 345666777776 7766532
Q ss_pred cccc-cH--HHHHHHhcCCCcEEeccc
Q 025169 142 ACCF-EE--EEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 142 g~~l-~~--~~~~~l~~~~i~v~~cP~ 165 (257)
-... ++ +.++.+++.|+++++.+.
T Consensus 98 vs~~~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 98 TNAEREKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCcccHHHHHHHHHHhCCcEEEEcC
Confidence 2212 32 556777888888776554
No 163
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=69.82 E-value=52 Score=28.11 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=62.3
Q ss_pred HHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe--ecccccHHHHHHHhcCCCcEEecccc-----cceeccc
Q 025169 101 FLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG--HACCFEEEEWRKLKSSKIPVEICLTS-----NIRTETI 173 (257)
Q Consensus 101 ~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~--Hg~~l~~~~~~~l~~~~i~v~~cP~S-----N~~l~~~ 173 (257)
+.++++..++.++++.+-. ..++-++.+++.|++.|- -|. .+++.++.+++.|+++++.+.. +++. .
T Consensus 92 v~pvI~~l~~~~vpiSIDT---~~~~Va~aAl~aGa~iINdVsg~-~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~--~ 165 (294)
T 2dqw_A 92 LLPVLEAVLSLGVPVSVDT---RKPEVAEEALKLGAHLLNDVTGL-RDERMVALAARHGVAAVVMHMPVPDPATMMA--H 165 (294)
T ss_dssp HHHHHHHHHTTCSCEEEEC---SCHHHHHHHHHHTCSEEECSSCS-CCHHHHHHHHHHTCEEEEECCSSSCTTTGGG--G
T ss_pred HHHHHHHHHhCCCeEEEEC---CCHHHHHHHHHhCCCEEEECCCC-CChHHHHHHHHhCCCEEEEcCCCCCCccccc--c
Confidence 3445555555589988865 456777888989998653 233 4778889999999999887753 1110 1
Q ss_pred cCCC----------cccHHHHHhcCCCEEecCCCCCCCCCChHHHHH
Q 025169 174 SSLD----------IHHFVDLYKAQHPLVLCTDDSGVFSTSVSREYD 210 (257)
Q Consensus 174 ~~~~----------~~pi~~l~~~Gv~v~lgTD~~~~~~~~l~~E~~ 210 (257)
+.|. ..-+..+.++||+ -|-=|-.-.|+.+....+.
T Consensus 166 ~~y~dv~~ev~~~l~~~i~~a~~~Gi~-~IilDPG~Gf~kt~~~n~~ 211 (294)
T 2dqw_A 166 ARYRDVVAEVKAFLEAQARRALSAGVP-QVVLDPGFGFGKLLEHNLA 211 (294)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHTTCS-CEEEECCTTSSCCHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHHHHHCCCC-cEEEcCCCCcccCHHHHHH
Confidence 1111 1125667789998 4444522234444443333
No 164
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=67.70 E-value=27 Score=28.85 Aligned_cols=57 Identities=11% Similarity=-0.034 Sum_probs=31.9
Q ss_pred CCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCE
Q 025169 123 PNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPL 191 (257)
Q Consensus 123 ~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v 191 (257)
...+.++.+++.|++-+. .-.++++.++..++.|+++. |... ....+.+.++.|..+
T Consensus 94 lt~~~a~~Ai~AGA~fIv-sP~~~~~vi~~~~~~gi~~i--pGv~---------TptEi~~A~~~Gad~ 150 (232)
T 4e38_A 94 LNGEQALAAKEAGATFVV-SPGFNPNTVRACQEIGIDIV--PGVN---------NPSTVEAALEMGLTT 150 (232)
T ss_dssp CSHHHHHHHHHHTCSEEE-CSSCCHHHHHHHHHHTCEEE--CEEC---------SHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHcCCCEEE-eCCCCHHHHHHHHHcCCCEE--cCCC---------CHHHHHHHHHcCCCE
Confidence 345566667777776653 33456677777776666542 3210 112356677777753
No 165
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=66.74 E-value=4.2 Score=22.47 Aligned_cols=22 Identities=14% Similarity=0.199 Sum_probs=19.6
Q ss_pred CChhcHHHHHHHHHHcCCceee
Q 025169 96 GEWTTFLPALKFAREQGLQITL 117 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~ 117 (257)
.+|++++++-+.|++.++++++
T Consensus 12 gtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCB
T ss_pred CCHHHHHHHHHHHHhccEEEEe
Confidence 3689999999999999999876
No 166
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=66.57 E-value=7.4 Score=33.73 Aligned_cols=97 Identities=10% Similarity=-0.023 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHH--cCCceeeecCCCCCHhhHHHHHhcCCcEE-ee
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE--QGLQITLHCGEIPNKEEIQSMLDFLPQRI-GH 141 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~--~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~H 141 (257)
+.+.++..++.+.+.+.+.++.+.-....+ ...+.+..+++.+.+ .++||.+|..=..+.+.+.++++.|-+.+ -=
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~y-~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFtSVMiD 104 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIKY-MGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMID 104 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHHH-HCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhhh-CCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCCcEEEE
Confidence 456666677777766666555554321111 133455566655544 57888888743334566667777665442 11
Q ss_pred cccc--------cHHHHHHHhcCCCcEEe
Q 025169 142 ACCF--------EEEEWRKLKSSKIPVEI 162 (257)
Q Consensus 142 g~~l--------~~~~~~~l~~~~i~v~~ 162 (257)
|-++ +.+.+++....|+.||-
T Consensus 105 gS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 133 (307)
T 3n9r_A 105 ASHHAFEENLELTSKVVKMAHNAGVSVEA 133 (307)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 1111 23445666666666654
No 167
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=66.19 E-value=32 Score=30.27 Aligned_cols=39 Identities=5% Similarity=-0.051 Sum_probs=26.8
Q ss_pred CChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCc
Q 025169 96 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQ 137 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ 137 (257)
.+.+.++.+++.+++.|+++..=. .+..++....++|++
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~---fD~~svd~l~~~~v~ 113 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTP---FDEESVDLIEAHGIE 113 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEE---CSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEecc---CCHHHHHHHHHcCCC
Confidence 466788899999999999987654 445555443344544
No 168
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=66.09 E-value=6.5 Score=34.05 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE-eecc
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI-GHAC 143 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~Hg~ 143 (257)
+.+.++..++.+.+.+.+.++.+.-.+..+. ..+.+..++..+.+.++||.+|..=..+.+.+.++++.|-+.+ -=|-
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~-g~~~~~~~v~~~a~~~VPValHlDHg~~~e~~~~ai~~GFtSVMiDgS 104 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILALSEGAMKYG-GRALTLMAVELAKEARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKS 104 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHH-HHHHHHHHHHHHHHCSSCEEEEEEEECSHHHHHHHHHTTCSEEEECCT
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhhC-CHHHHHHHHHHHHhCCCcEEEECCCCCCHHHHHHHHHcCCCeeeeCCC
Confidence 4566666666666666655555443221111 2234444444443377888888743334566667776665442 1111
Q ss_pred cc--------cHHHHHHHhcCCCcEEe
Q 025169 144 CF--------EEEEWRKLKSSKIPVEI 162 (257)
Q Consensus 144 ~l--------~~~~~~~l~~~~i~v~~ 162 (257)
++ +.+.+++....|+.||-
T Consensus 105 ~~p~eENi~~Tk~vv~~ah~~gvsVEa 131 (305)
T 1rvg_A 105 HEDFETNVRETRRVVEAAHAVGVTVEA 131 (305)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 11 23445566666666654
No 169
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=66.08 E-value=10 Score=32.81 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=68.3
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCHh-----------hHH--------HHHhcCC--c-EEeecccccHHHH---H
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNKE-----------EIQ--------SMLDFLP--Q-RIGHACCFEEEEW---R 151 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~-----------~i~--------~~l~lg~--~-ri~Hg~~l~~~~~---~ 151 (257)
..+.|.+.++.|.++|++|.+|.+....+. ... ..++--+ . .+.||-..-|..+ +
T Consensus 157 ~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~~~P~l~~vi~H~Gg~~p~~~~r~~ 236 (350)
T 2gwg_A 157 TDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFKDFPELKFVIPHGGGAVPYHWGRFR 236 (350)
T ss_dssp TSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHHHCTTCCEEESGGGTTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccccCCCCcEEeccCCCcchhhHHHHH
Confidence 346799999999999999999998653210 111 1111112 2 3689852212111 1
Q ss_pred H----HhcCCCcEEecccccceeccccCCCcccHHHHHhc-CC-CEEecCCCCCCCCC------ChHHHH-HHHHHhCCC
Q 025169 152 K----LKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKA-QH-PLVLCTDDSGVFST------SVSREY-DLAASAFSL 218 (257)
Q Consensus 152 ~----l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~-Gv-~v~lgTD~~~~~~~------~l~~E~-~~a~~~~~l 218 (257)
. +++ ..+...-..|+++.. ..+....+..+++. |. +|-+|||-|-..+. ....+. .......++
T Consensus 237 ~~~~~~~~--~~l~~~~~~n~y~d~-s~~~~~~l~~l~~~~g~dril~gSD~P~~~~~~~p~~~~~~~~~~~~l~~~~~l 313 (350)
T 2gwg_A 237 GLAQEMKK--PLLEDHVLNNIFFDT-CVYHQPGIDLLNTVIPVDNVLFASEMIGAVRGIDPRTGFYYDDTKRYIEASTIL 313 (350)
T ss_dssp HHHHHTTC--CCHHHHTTTTEEEEC-CCCSHHHHHHHHHHSCGGGEECCCCCSSSCCCEETTTTEETTCTHHHHHHCSSS
T ss_pred HHHHhccC--CCcHHHHhhcEEEEe-cccCcHHHHHHHHHhCcccEEEecCCCCCcccCCcccccchhhHHHHHHhccCC
Confidence 1 211 000000112444322 11222235555554 43 79999998854220 011111 222232389
Q ss_pred CHHHHHHHH-HHHHHHcC
Q 025169 219 GRREMFQLA-KSAVKFIF 235 (257)
Q Consensus 219 s~~~v~~~~-~n~~~~~~ 235 (257)
+.++..++. .|+.+...
T Consensus 314 ~~~~~~~i~~~NA~rl~~ 331 (350)
T 2gwg_A 314 TPEEKQQIYEGNARRVYP 331 (350)
T ss_dssp CHHHHHHHHTHHHHHHCH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999998886 78887664
No 170
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=65.98 E-value=65 Score=27.80 Aligned_cols=61 Identities=13% Similarity=0.171 Sum_probs=42.8
Q ss_pred HHHHHHHHHH-cCCceeeecCCCCCHhhHHHHHhcCCcEEee--cccccHHHHHHHhcCCCcEEeccc
Q 025169 101 FLPALKFARE-QGLQITLHCGEIPNKEEIQSMLDFLPQRIGH--ACCFEEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 101 ~~~~~~~A~~-~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~H--g~~l~~~~~~~l~~~~i~v~~cP~ 165 (257)
+.++++..++ .++++.+-. ..++-++.+++.|++.|-= |.. +++.++.+++.|+++++++.
T Consensus 93 v~pvI~~l~~~~~vpISIDT---~~~~Va~aAl~aGa~iINDVsg~~-~~~m~~v~a~~g~~vVlMh~ 156 (314)
T 3tr9_A 93 LLPVIDAIKKRFPQLISVDT---SRPRVMREAVNTGADMINDQRALQ-LDDALTTVSALKTPVCLMHF 156 (314)
T ss_dssp HHHHHHHHHHHCCSEEEEEC---SCHHHHHHHHHHTCCEEEETTTTC-STTHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHhhCCCeEEEeC---CCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCeEEEECC
Confidence 3445555544 488988865 4567778889889876632 222 56778899999999987764
No 171
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=65.55 E-value=13 Score=32.47 Aligned_cols=97 Identities=11% Similarity=0.080 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHH-H-cCCceeeecCCCCCHhhHHHHHhcCCcEE-ee
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAR-E-QGLQITLHCGEIPNKEEIQSMLDFLPQRI-GH 141 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~-~-~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~H 141 (257)
+.+.++..++.+.+.+.+.++.+.-....+. ..+.+..++..+. + .++||.+|..=..+.+.+..+++.|-+.+ -=
T Consensus 27 n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~-g~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD 105 (323)
T 2isw_A 27 NMEQIQGIMKAVVQLKSPVILQCSRGALKYS-DMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMID 105 (323)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHT-TTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHHhC-CHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEec
Confidence 4566677777777766665555543221222 2344555555443 3 57888888743334556667777665442 11
Q ss_pred cccc--------cHHHHHHHhcCCCcEEe
Q 025169 142 ACCF--------EEEEWRKLKSSKIPVEI 162 (257)
Q Consensus 142 g~~l--------~~~~~~~l~~~~i~v~~ 162 (257)
|-++ +.+.+++....|+.||-
T Consensus 106 gS~~p~eENi~~Tk~vv~~ah~~gvsVEa 134 (323)
T 2isw_A 106 ASHHPFDENVRITKEVVAYAHARSVSVEA 134 (323)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 1111 23445556666666643
No 172
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=63.03 E-value=58 Score=26.21 Aligned_cols=100 Identities=8% Similarity=-0.100 Sum_probs=56.0
Q ss_pred ccceeeeecc-CccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCC--CCH---HHHHHHHHHHHhhCCCceEEEec
Q 025169 16 AVSAVDVDFA-SRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRR--ETT---EAAMETVKLALEMRDLGVVGIDL 89 (257)
Q Consensus 16 ~v~y~E~r~~-p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~--~~~---e~~~~~~~~~~~~~~~~vvg~~l 89 (257)
.+.++|++.. |..+... .+-+++..+..++.|+++.-+.+...- .++ +...+.++.+.....+.++. ..
T Consensus 32 G~~~vEl~~~~~~~~~~~----~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~-~~ 106 (272)
T 2q02_A 32 EFNKVELRNDMPSGSVTD----DLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVL-CP 106 (272)
T ss_dssp TCCEEEEETTSTTSSTTT----TCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEE-CC
T ss_pred CCCEEEeecccccccccc----ccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEE-cc
Confidence 5789999875 3212111 123445556677889988555432221 112 33456667776666653432 21
Q ss_pred cCC-CCCC--C-hhcHHHHHHHHHHcCCceeeecC
Q 025169 90 SGN-PTKG--E-WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 90 ~g~-~~~~--~-~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
... .... - .+.++++.+.|+++|+.+.+|..
T Consensus 107 g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 141 (272)
T 2q02_A 107 LNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPL 141 (272)
T ss_dssp CCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 111 1111 1 45567788889999999999864
No 173
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=62.75 E-value=22 Score=28.29 Aligned_cols=115 Identities=15% Similarity=0.104 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCC--CHhhHHHHHhcCCcEEeec
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP--NKEEIQSMLDFLPQRIGHA 142 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~--~~~~i~~~l~lg~~ri~Hg 142 (257)
++++..+.++....+.+.++.++.+.|.++...++.+.++++.+++.|+.+++...-.. ..+.+....+. .+++.-+
T Consensus 51 ~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~is 129 (245)
T 3c8f_A 51 TVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLD 129 (245)
T ss_dssp CHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEE
T ss_pred CHHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEe
Confidence 45555555543333321112334444444444555578999999999998888774333 34444444444 5666655
Q ss_pred ccc-cHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCC
Q 025169 143 CCF-EEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTD 196 (257)
Q Consensus 143 ~~l-~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD 196 (257)
+.- +++..+.+.. . ++-. -..-+..+.+.|+++.+.+.
T Consensus 130 ld~~~~~~~~~~~~--~-------~~~~-------~~~~i~~l~~~g~~v~i~~~ 168 (245)
T 3c8f_A 130 LKQMNDEIHQNLVG--V-------SNHR-------TLEFAKYLANKNVKVWIRYV 168 (245)
T ss_dssp CCCSSHHHHHHHHS--S-------CSHH-------HHHHHHHHHHHTCCEEEEEE
T ss_pred CCCCCHHHhhhccC--C-------CHHH-------HHHHHHHHHhcCCEEEEEEe
Confidence 554 5666666642 1 1111 11246777788888887765
No 174
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=61.08 E-value=72 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=19.0
Q ss_pred HHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE
Q 025169 106 KFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI 139 (257)
Q Consensus 106 ~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri 139 (257)
+..+..++|+.+|-|-..+.+.++.++.+|..-+
T Consensus 200 ~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 233 (288)
T 3q94_A 200 QVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKI 233 (288)
T ss_dssp HHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred HHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEE
Confidence 3333346777777654444556666666665443
No 175
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=60.77 E-value=40 Score=29.19 Aligned_cols=64 Identities=8% Similarity=-0.083 Sum_probs=45.3
Q ss_pred hhcHHHH---HHHHHHc--CCceeeecCCCCCHhhHHHHHhcCCcEEe--ecccccHHHHHHHhcCCCcEEeccc
Q 025169 98 WTTFLPA---LKFAREQ--GLQITLHCGEIPNKEEIQSMLDFLPQRIG--HACCFEEEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 98 ~~~~~~~---~~~A~~~--gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~--Hg~~l~~~~~~~l~~~~i~v~~cP~ 165 (257)
.++++++ ++..++. ++++.+-. ..++-++.+++.|++.|- .|.. +++.++.+++.|+++++.+.
T Consensus 98 ~eEl~Rv~pvI~~l~~~~~~vpISIDT---~~~~VaeaAl~aGa~iINDVsg~~-d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 98 DTEITRLVPFIEWLRGAYPDQLISVDT---WRAQVAKAACAAGADLINDTWGGV-DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEC---SCHHHHHHHHHHTCCEEEETTSSS-STTHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHhhCCCCeEEEeC---CCHHHHHHHHHhCCCEEEECCCCC-chHHHHHHHHhCCCEEEECC
Confidence 3555544 5555544 88988865 456777889989998664 2223 67888999999999988774
No 176
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=59.33 E-value=28 Score=30.90 Aligned_cols=107 Identities=11% Similarity=0.086 Sum_probs=64.1
Q ss_pred EEEEeeCCC-CHHHHHHHHHHHHhhCCCceEEEeccCCCCC--CChhcHHHHHHHHHHcCCceeeecCCCC------CHh
Q 025169 56 LLLSIDRRE-TTEAAMETVKLALEMRDLGVVGIDLSGNPTK--GEWTTFLPALKFAREQGLQITLHCGEIP------NKE 126 (257)
Q Consensus 56 li~~~~r~~-~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~--~~~~~~~~~~~~A~~~gl~v~~Ha~E~~------~~~ 126 (257)
+++++--.. ..++..+.++.+.++.-..+.. .|...+.. .-.+.|+++.+.|+++|+.+.+-.+-.. ...
T Consensus 5 lGiSvY~~~~~~~~~~~yi~~a~~~Gf~~IFT-SL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~ 83 (372)
T 2p0o_A 5 YGISVFLGEEITNDTIIYIKKMKALGFDGIFT-SLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFD 83 (372)
T ss_dssp EEEECCTTSCCCHHHHHHHHHHHHTTCCEEEE-EECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHCCCCEEEc-cCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHH
Confidence 445544332 3456678888888887665433 23222221 2247789999999999999999874110 011
Q ss_pred hHHHHHhcCCc--EEeecccccHHHHHHHhcCCCcEEecccc
Q 025169 127 EIQSMLDFLPQ--RIGHACCFEEEEWRKLKSSKIPVEICLTS 166 (257)
Q Consensus 127 ~i~~~l~lg~~--ri~Hg~~l~~~~~~~l~~~~i~v~~cP~S 166 (257)
.+....++|.+ |+..|+ +.+++..|... +.++++.+.
T Consensus 84 dl~~~~~lGi~glRLD~Gf--~~~eia~ls~n-lkIeLNASt 122 (372)
T 2p0o_A 84 ELEPLIELGVTGLRMDYGI--TIEQMAHASHK-IDIGLNAST 122 (372)
T ss_dssp BCHHHHHHTCCEEEECSSC--CHHHHHHHHTT-SEEEEETTT
T ss_pred HHHHHHHcCCCEEEEcCCC--CHHHHHHHhcC-CEEEEECcc
Confidence 22333446775 777776 55666777655 777776543
No 177
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=59.32 E-value=20 Score=31.64 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=43.4
Q ss_pred hcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCC--CCCCChhcHHHHHHHHHHcCCceeeecCCC
Q 025169 45 NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGN--PTKGEWTTFLPALKFAREQGLQITLHCGEI 122 (257)
Q Consensus 45 ~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~--~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~ 122 (257)
+.++..+=|.+...++. ...++.+.+.++.+.+- .|++|+-+... ........+.++++.+.++|++|.+|.+..
T Consensus 138 ~~~~~~P~Rf~g~a~v~-~~~~~~a~~EL~r~~~~--~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 138 DACQKYPDRFIGMGTVA-PQDPEWSAREIHRGARE--LGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHSTTTEEECBCCC-TTSHHHHHHHHHHHHHT--SCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHhCCCEEEEEEecC-CCCHHHHHHHHHHHHhh--cCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 33344443444333333 33455554444444321 24556555432 112234679999999999999999999865
Q ss_pred C
Q 025169 123 P 123 (257)
Q Consensus 123 ~ 123 (257)
.
T Consensus 215 ~ 215 (373)
T 4inf_A 215 P 215 (373)
T ss_dssp C
T ss_pred C
Confidence 4
No 178
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=59.24 E-value=21 Score=31.17 Aligned_cols=74 Identities=18% Similarity=0.121 Sum_probs=42.2
Q ss_pred cccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCC--CCCChhcHHHHHHHHHHcCCceeeecCCC
Q 025169 46 GTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNP--TKGEWTTFLPALKFAREQGLQITLHCGEI 122 (257)
Q Consensus 46 a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~--~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~ 122 (257)
.+++.+=|.+...++. ...++.+.+.++.+.+ ..|++|+.+.+.. .......+.++++.+.++|++|.+|.+..
T Consensus 121 ~~~~~P~Rf~g~a~v~-~~~~~~a~~El~r~~~--~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 121 YIAQYPNRFVGFATLP-INEPEAAAREFERCIN--DLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHSTTTEEECBCCC-TTSHHHHHHHHHHHHH--TTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHhCCCEEEEEEeCC-CCCHHHHHHHHHHHHh--hcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 3334443443333332 2345555555554432 2345555554221 12234679999999999999999999864
No 179
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=58.84 E-value=6.5 Score=36.96 Aligned_cols=85 Identities=18% Similarity=0.085 Sum_probs=52.0
Q ss_pred CcEEeeccc----------cc-HHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCCCCC
Q 025169 136 PQRIGHACC----------FE-EEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVFSTS 204 (257)
Q Consensus 136 ~~ri~Hg~~----------l~-~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~ 204 (257)
.+.++|-.. .+ ++.++.+++.|+.++++..+- ..+ ....-+..+.+.|+++++|||.=......
T Consensus 463 v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~g~~lEIN~~~~-~~~----~~~~~~~~a~e~G~~~vigSDAH~~~~~~ 537 (575)
T 3b0x_A 463 VHVLAHPTARLLGRRAPIEADWEAVFQKAKEKGVAVEIDGYYD-RMD----LPDDLARMAYGMGLWISLSTDAHQTDHLR 537 (575)
T ss_dssp CCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHTCEEEEECCTT-TCB----SCHHHHHHHHHTTCCEEEECCBSSGGGGG
T ss_pred CeEEECCchhhcCCCcCchHHHHHHHHHHHHcCCEEEEeCCCC-cCC----chHHHHHHHHHcCCeEEEECCCCChHHhh
Confidence 467888641 12 346788888999999976552 111 12223566788999999999964333322
Q ss_pred hHHHHHHHHHhCCCCHHHHHH
Q 025169 205 VSREYDLAASAFSLGRREMFQ 225 (257)
Q Consensus 205 l~~E~~~a~~~~~ls~~~v~~ 225 (257)
-+++....+...|++..+++.
T Consensus 538 ~~~~~~~~~~~~g~~~~~v~n 558 (575)
T 3b0x_A 538 FMELAVGTAQRAWIGPERVLN 558 (575)
T ss_dssp GHHHHHHHHHHTTCCSTTBGG
T ss_pred hHHHHHHHHHHcCCCHHHeec
Confidence 345544445556766555443
No 180
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=58.38 E-value=42 Score=27.42 Aligned_cols=142 Identities=8% Similarity=0.011 Sum_probs=72.6
Q ss_pred hhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCC-CC------CChhcHHHHHHHHHHc-
Q 025169 40 MNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNP-TK------GEWTTFLPALKFAREQ- 111 (257)
Q Consensus 40 ~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~-~~------~~~~~~~~~~~~A~~~- 111 (257)
.+++++.+++.|+...+..+.. ++.....++++.++....+.++++.+.. .. .+.+.+..+.+.+.+.
T Consensus 22 ~~~~l~~~~~~Gv~~~v~~~~~----~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 97 (272)
T 2y1h_A 22 LDDVLEKAKKANVVALVAVAEH----SGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYK 97 (272)
T ss_dssp HHHHHHHHHHTTEEEEEECCSS----GGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHCCCCEEEEeCCC----HHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCC
Confidence 3444555567788876665432 3334556666666654323344443211 11 2234455555554432
Q ss_pred ---------CCceeeecCCCCCHhh---------HHHHHhcCCcEEeecccccHHHHHHHhcCC--CcEEecccccceec
Q 025169 112 ---------GLQITLHCGEIPNKEE---------IQSMLDFLPQRIGHACCFEEEEWRKLKSSK--IPVEICLTSNIRTE 171 (257)
Q Consensus 112 ---------gl~v~~Ha~E~~~~~~---------i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~--i~v~~cP~SN~~l~ 171 (257)
|+....+......+.. +.-+.++|.-.+-|+....++.++++++.+ -.+.||-+.+.
T Consensus 98 ~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~~~~~~il~~~~~~~~v~H~~~g~~--- 174 (272)
T 2y1h_A 98 DRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRP--- 174 (272)
T ss_dssp GGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHHHHHHHTTCCSEEEETCCSCH---
T ss_pred CCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHHHHHHHHhCCCCCEEEEccCCCH---
Confidence 2222111100000111 122333677888998877778888888764 12446643211
Q ss_pred cccCCCcccHHHHHhcCCCEEecC
Q 025169 172 TISSLDIHHFVDLYKAQHPLVLCT 195 (257)
Q Consensus 172 ~~~~~~~~pi~~l~~~Gv~v~lgT 195 (257)
.-+.++++.|+-++++.
T Consensus 175 -------~~~~~~~~~g~~i~~~g 191 (272)
T 2y1h_A 175 -------SVAMEGVRAGYFFSIPP 191 (272)
T ss_dssp -------HHHHHHHHTTCEEEECG
T ss_pred -------HHHHHHHHCCCEEEECC
Confidence 23577889999888873
No 181
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=57.52 E-value=71 Score=26.79 Aligned_cols=94 Identities=12% Similarity=-0.005 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc-CCceeeecCCCCCHhhHHHHHhc--CCcEEeecc
Q 025169 67 EAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDF--LPQRIGHAC 143 (257)
Q Consensus 67 e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~-gl~v~~Ha~E~~~~~~i~~~l~l--g~~ri~Hg~ 143 (257)
+.+.+..+...+...+ ++.++....+ ....+.+.++++..++. ++|+.+-. ..++-+..+++. |++.|---.
T Consensus 34 ~~a~~~a~~~v~~GAd-iIDIg~~s~~-~eE~~rv~~vi~~l~~~~~~pisIDT---~~~~v~~aal~a~~Ga~iINdvs 108 (271)
T 2yci_X 34 RPIQEWARRQAEKGAH-YLDVNTGPTA-DDPVRVMEWLVKTIQEVVDLPCCLDS---TNPDAIEAGLKVHRGHAMINSTS 108 (271)
T ss_dssp HHHHHHHHHHHHTTCS-EEEEECCSCS-SCHHHHHHHHHHHHHHHCCCCEEEEC---SCHHHHHHHHHHCCSCCEEEEEC
T ss_pred HHHHHHHHHHHHCCCC-EEEEcCCcCc-hhHHHHHHHHHHHHHHhCCCeEEEeC---CCHHHHHHHHHhCCCCCEEEECC
Confidence 4444443333333333 5554443211 12345677777776665 89988865 456667788887 887664222
Q ss_pred cc-c--HHHHHHHhcCCCcEEeccc
Q 025169 144 CF-E--EEEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 144 ~l-~--~~~~~~l~~~~i~v~~cP~ 165 (257)
.. + ++.++.+++.|++++..+.
T Consensus 109 ~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 109 ADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp SCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred CCccccHHHHHHHHHcCCCEEEEec
Confidence 22 3 5677888889988877665
No 182
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=56.60 E-value=1.1e+02 Score=27.24 Aligned_cols=70 Identities=14% Similarity=0.142 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEeccC-----CC----C-----------------CCChhcHHHHHHHHHHcCCceee
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDLSG-----NP----T-----------------KGEWTTFLPALKFAREQGLQITL 117 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l~g-----~~----~-----------------~~~~~~~~~~~~~A~~~gl~v~~ 117 (257)
.+.+.+.+.++.+.+...+ .+-+...- .+ + ..+.+.++.+++.+++.|+++..
T Consensus 41 Gsle~A~~li~~Ak~aGAd-avKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~s 119 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGAD-AVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLS 119 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCS-EEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEEC
T ss_pred ccHHHHHHHHHHHHHhCCC-EEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEE
Confidence 4678888888887765544 22222110 01 1 13668899999999999999865
Q ss_pred ecCCCCCHhhHHHHHhcCCc
Q 025169 118 HCGEIPNKEEIQSMLDFLPQ 137 (257)
Q Consensus 118 Ha~E~~~~~~i~~~l~lg~~ 137 (257)
= ..+..++....+++++
T Consensus 120 t---pfD~~svd~l~~~~vd 136 (385)
T 1vli_A 120 T---VCDEGSADLLQSTSPS 136 (385)
T ss_dssp B---CCSHHHHHHHHTTCCS
T ss_pred c---cCCHHHHHHHHhcCCC
Confidence 3 3455555443344443
No 183
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=56.55 E-value=1.2e+02 Score=28.96 Aligned_cols=133 Identities=11% Similarity=0.009 Sum_probs=70.6
Q ss_pred HHHHHHHhhccceee--eecc-Cccccc--cCCCchhhhhhHhhc-------ccCC-CcEEEEEEEee---CCCCHHHHH
Q 025169 7 MDAVVEGLRAVSAVD--VDFA-SRSIDV--RRPVNTKNMNDACNG-------TRGK-KIYVRLLLSID---RRETTEAAM 70 (257)
Q Consensus 7 ~~~~~~~~~~v~y~E--~r~~-p~~~~~--~~~~~~~~~~~~~~a-------~~~~-gir~~li~~~~---r~~~~e~~~ 70 (257)
++..++++.....-+ +..+ ...|.. -|.|.+++++.+.+. .+++ +.....-++.. | .+++.+.
T Consensus 151 id~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasr-td~dfl~ 229 (644)
T 3hq1_A 151 IERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTG-TELEYAK 229 (644)
T ss_dssp HHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGG-SCHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCC-CCHHHHH
Confidence 455666666544333 3333 233333 367788887754321 1221 22222223322 3 4678888
Q ss_pred HHHHHHHhhC---CCceEEEeccCCCCCCChhcHHHHHHHHHHc-----CCceeeecCCCCCH--hhHHHHHhcCCcEEe
Q 025169 71 ETVKLALEMR---DLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-----GLQITLHCGEIPNK--EEIQSMLDFLPQRIG 140 (257)
Q Consensus 71 ~~~~~~~~~~---~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~-----gl~v~~Ha~E~~~~--~~i~~~l~lg~~ri~ 140 (257)
+.++.+.+.. .+..+-+.+.-.-...+|..+...++..++. ++++.+|+.-..+- .+...+++.|++++.
T Consensus 230 ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vd 309 (644)
T 3hq1_A 230 QVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIE 309 (644)
T ss_dssp HHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEE
Confidence 8888776642 2222233333211234677777766655443 57888888755442 345577778998875
No 184
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=56.10 E-value=51 Score=26.59 Aligned_cols=95 Identities=15% Similarity=0.102 Sum_probs=52.6
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCC--CCH-------HHHHHHHHHHHhhCCCceEE
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRR--ETT-------EAAMETVKLALEMRDLGVVG 86 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~--~~~-------e~~~~~~~~~~~~~~~~vvg 86 (257)
.+.++|+...+. .+.-+++..+..++.|+++..+.....- .++ +...+.++.+.....+.++
T Consensus 31 G~~~vEl~~~~~--------~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~- 101 (275)
T 3qc0_A 31 GITAIAPWRDQV--------AAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV- 101 (275)
T ss_dssp TCCEEECBHHHH--------HHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE-
T ss_pred CCCEEEeccccc--------cccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE-
Confidence 477899876431 1223445556677788887544332221 122 2334555666655555333
Q ss_pred EeccCCCC-CCC--------hhcHHHHHHHHHHcCCceeeec
Q 025169 87 IDLSGNPT-KGE--------WTTFLPALKFAREQGLQITLHC 119 (257)
Q Consensus 87 ~~l~g~~~-~~~--------~~~~~~~~~~A~~~gl~v~~Ha 119 (257)
+.....+. ..+ .+.++++.+.|+++|+.+.+|.
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 143 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP 143 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE
Confidence 33222221 112 1446677888999999999995
No 185
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=56.09 E-value=40 Score=28.33 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=53.4
Q ss_pred ccceeeeecc-Ccc-----ccccCCCchhhhhhHhhcccCCCcEEEEEEEee--CCCC-------HHHHHHHHHHHHhhC
Q 025169 16 AVSAVDVDFA-SRS-----IDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID--RRET-------TEAAMETVKLALEMR 80 (257)
Q Consensus 16 ~v~y~E~r~~-p~~-----~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~--r~~~-------~e~~~~~~~~~~~~~ 80 (257)
.+.++|++.. |.. +.....+ .+-++++.+..++.|+++..+.... ...+ .+...+.++.+....
T Consensus 49 G~~~VEl~~~~~~~~~~~~~~p~~~~-~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG 127 (305)
T 3obe_A 49 GYTDLEIFGYREDTGKFGDYNPKNTT-FIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELG 127 (305)
T ss_dssp TCCEEEECCBCTTTCCBCCC----CC-CBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEecccccccccccCcCccccc-ccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcC
Confidence 4889999864 211 1111111 1134555567788899876543211 1111 123455666666666
Q ss_pred CCceEEEeccCCCCCCCh-------hcHHHHHHHHHHcCCceeeec
Q 025169 81 DLGVVGIDLSGNPTKGEW-------TTFLPALKFAREQGLQITLHC 119 (257)
Q Consensus 81 ~~~vvg~~l~g~~~~~~~-------~~~~~~~~~A~~~gl~v~~Ha 119 (257)
.+.++ +. +.+...+. +.++++.+.|+++|+.+.+|-
T Consensus 128 ~~~v~-~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 170 (305)
T 3obe_A 128 VSCMV-QP--SLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHN 170 (305)
T ss_dssp CSEEE-EC--CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred CCEEE-eC--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 66444 32 21211222 446677888899999988874
No 186
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=55.47 E-value=63 Score=26.09 Aligned_cols=28 Identities=29% Similarity=0.442 Sum_probs=13.3
Q ss_pred CCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 112 GLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 112 gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
.+||.. +|-....+...+.++.|++++|
T Consensus 175 ~ipVia-~GGI~t~~da~~~l~aGA~~iG 202 (225)
T 1mzh_A 175 RIKVKA-SGGIRDLETAISMIEAGADRIG 202 (225)
T ss_dssp SSEEEE-ESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCcEEE-ECCCCCHHHHHHHHHhCchHHH
Confidence 355444 2322334444555556666653
No 187
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=54.79 E-value=29 Score=31.19 Aligned_cols=184 Identities=12% Similarity=0.068 Sum_probs=92.1
Q ss_pred hccc-CCC-cEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCC-------CCCCChhcHHHHHHHHHHcCCce
Q 025169 45 NGTR-GKK-IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGN-------PTKGEWTTFLPALKFAREQGLQI 115 (257)
Q Consensus 45 ~a~~-~~g-ir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~-------~~~~~~~~~~~~~~~A~~~gl~v 115 (257)
+..+ ..+ =|.+-..++. -.+++.+.+.++.+.+. |+.|+-+... ........+.++++.+.++|++|
T Consensus 152 e~~~~~~P~~Rf~g~a~v~-~~d~~~a~~EL~r~~~~---G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV 227 (423)
T 4dzi_A 152 EDWGFDRPDHRIIAAPIVS-LADPTRAVEEVDFVLAR---GAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPV 227 (423)
T ss_dssp HHTCSSCTTCCEEECCBCC-CSSHHHHHHHHHHHHHT---TCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCE
T ss_pred HHHHhhCCCCcEEEEEeCC-ccCHHHHHHHHHHHHHc---CCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeE
Confidence 3444 454 4544433333 23566666666655543 4555555311 11123367999999999999999
Q ss_pred eeecCCCCCHh----------------------------h----HHHHHhcC-----Cc---EEeecc-cccHHHHHHHh
Q 025169 116 TLHCGEIPNKE----------------------------E----IQSMLDFL-----PQ---RIGHAC-CFEEEEWRKLK 154 (257)
Q Consensus 116 ~~Ha~E~~~~~----------------------------~----i~~~l~lg-----~~---ri~Hg~-~l~~~~~~~l~ 154 (257)
.+|.+...... . +...+.-| |+ .++|+= ..-+..+.++.
T Consensus 228 ~iH~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Li~sGvf~RfP~Lkiil~h~Gg~wlP~~l~Rld 307 (423)
T 4dzi_A 228 GFHLSDSGYLHIAAAWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFTRHPKLKAVSIENGSYFVHRLIKRLK 307 (423)
T ss_dssp EEECCCCSTHHHHHHTTCC-------CCCHHHHHHHTTHHHHHHHHHHHHTTHHHHCTTCCEEEESSCSTHHHHHHHHHH
T ss_pred EEeCCCCCccccccccccccccccccccchhHHHhccchHHHHHHHHHHHcCchhhCCCCeEEEeCCCcchHHHHHHHHH
Confidence 99998753210 0 00111112 21 245653 21233333221
Q ss_pred ----cCCCcEEecccc----cceeccccCCCcccHHHHHhc-CC-CEEecCCCCCCCCC-ChHHHHHHHHHhCCCCHHHH
Q 025169 155 ----SSKIPVEICLTS----NIRTETISSLDIHHFVDLYKA-QH-PLVLCTDDSGVFST-SVSREYDLAASAFSLGRREM 223 (257)
Q Consensus 155 ----~~~i~v~~cP~S----N~~l~~~~~~~~~pi~~l~~~-Gv-~v~lgTD~~~~~~~-~l~~E~~~a~~~~~ls~~~v 223 (257)
...-.+..-|+. |++... +....+..+++. |. +|..|||-|-..+. +. .++ .....+++.++.
T Consensus 308 ~~~~~~~~~~~~~Pse~~r~n~y~t~---~~~~~l~~~~~~~G~drilfgSDyP~~~~~~~~-~~~--~~~l~~l~~~~~ 381 (423)
T 4dzi_A 308 KAANTQPQYFPEDPVEQLRNNVWIAP---YYEDDLPELARVIGVDKILFGSDWPHGEGLASP-VSF--TAELKGFSESDI 381 (423)
T ss_dssp HHHHHCGGGCSSCHHHHHHHHEEECC---CTTSCHHHHHHHHCGGGBCCCCCBTSTTSCSSG-GGG--GGGCTTSCHHHH
T ss_pred HHHHhCccccCCCHHHHHhhCeEEee---cChHHHHHHHHHcCcceEEEecCCCCccCccCH-HHH--HHHhcCCCHHHH
Confidence 111011111211 333221 223456666554 54 79999998864332 11 111 111238999999
Q ss_pred HHHH-HHHHHHcCCCh
Q 025169 224 FQLA-KSAVKFIFANG 238 (257)
Q Consensus 224 ~~~~-~n~~~~~~~~~ 238 (257)
.++. .|+.+...++.
T Consensus 382 ~~I~~~NA~rl~~l~~ 397 (423)
T 4dzi_A 382 RKIMRDNALDLLGVQV 397 (423)
T ss_dssp HHHHTHHHHHHHC---
T ss_pred HHHHHHHHHHHHCCCc
Confidence 9985 89999888765
No 188
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=54.70 E-value=68 Score=26.24 Aligned_cols=203 Identities=11% Similarity=0.005 Sum_probs=98.7
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeC-----CCCHH-------HHHHHHHHHHhhCCCc
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDR-----RETTE-------AAMETVKLALEMRDLG 83 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r-----~~~~e-------~~~~~~~~~~~~~~~~ 83 (257)
.+.++|++..+.. .. .++-+++..+..++.|+++..+.+... ..+++ ...+.++.+.....+.
T Consensus 30 G~~~vEl~~~~~~----~~-~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~ 104 (294)
T 3vni_A 30 GFDILEIAASPLP----FY-SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHL 104 (294)
T ss_dssp TCSEEEEESTTGG----GC-CHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEecCcccC----Cc-CHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 4789999976421 11 133455666777889998876443321 11222 2344556666666554
Q ss_pred eEEEecc-CCC--C--CCC--------hhcHHHHHHHHHHcCCceeeecC---CCC---CHhhHHHHHh-cCCcE-----
Q 025169 84 VVGIDLS-GNP--T--KGE--------WTTFLPALKFAREQGLQITLHCG---EIP---NKEEIQSMLD-FLPQR----- 138 (257)
Q Consensus 84 vvg~~l~-g~~--~--~~~--------~~~~~~~~~~A~~~gl~v~~Ha~---E~~---~~~~i~~~l~-lg~~r----- 138 (257)
+++ .+. +.+ + ..+ .+.++++.+.|+++|+.+.+|.. +.. ..+.+.+.++ .+...
T Consensus 105 v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~vg~~~ 183 (294)
T 3vni_A 105 IGG-ALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQVDHNNVKVML 183 (294)
T ss_dssp EEE-STTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHHCCTTEEEEE
T ss_pred eec-cccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCEEEEE
Confidence 433 121 111 1 112 13466777888999999999864 221 2334444443 34322
Q ss_pred -Eeecccc--cH-HHHHHHhcCCCcEEecccccceeccccCCCcccHHH----HHhcCC--CEEecCCCCCCCCCChHHH
Q 025169 139 -IGHACCF--EE-EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVD----LYKAQH--PLVLCTDDSGVFSTSVSRE 208 (257)
Q Consensus 139 -i~Hg~~l--~~-~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~----l~~~Gv--~v~lgTD~~~~~~~~l~~E 208 (257)
++|.... ++ +.++.+.. .+..+|.=-++. ..++-|..++.. +.+.|. ++++=..++. ..+
T Consensus 184 D~~h~~~~g~d~~~~l~~~~~-~i~~vHl~D~~r---~~pG~G~id~~~~~~~L~~~gy~g~~~lE~~~~~------~~~ 253 (294)
T 3vni_A 184 DTFHMNIEEDSIGGAIRTAGS-YLGHLHTGECNR---KVPGRGRIPWVEIGEALADIGYNGSVVMEPFVRM------GGT 253 (294)
T ss_dssp EHHHHHHHCSCHHHHHHHHGG-GEEEEEECCTTS---CCTTSSSCCHHHHHHHHHHTTCCSCEEECCCCCC------CHH
T ss_pred EhhhhHHcCCCHHHHHHHhhh-hEeEEEeCCCCC---CCCCCCCcCHHHHHHHHHHhCCCCcEEEEeccCC------Ccc
Confidence 3565543 32 44666653 355555433221 223335555443 334443 3555444321 122
Q ss_pred HHHHHHhC-----CCCHHHHHHHHHHHHHHc
Q 025169 209 YDLAASAF-----SLGRREMFQLAKSAVKFI 234 (257)
Q Consensus 209 ~~~a~~~~-----~ls~~~v~~~~~n~~~~~ 234 (257)
+......+ +-..+.+.+++++|+.++
T Consensus 254 ~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~l 284 (294)
T 3vni_A 254 VGSNIKVWRDISNGADEKMLDREAQAALDFS 284 (294)
T ss_dssp HHHHHTCCSCTTCSCCHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhcccCCcchhhHHHHHHHHHHHH
Confidence 22222211 122345566677776653
No 189
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=54.55 E-value=1e+02 Score=26.25 Aligned_cols=114 Identities=13% Similarity=0.062 Sum_probs=64.9
Q ss_pred EEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcC--CcEEeecccc-cHHHHHHHhcCCCcEE
Q 025169 85 VGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL--PQRIGHACCF-EEEEWRKLKSSKIPVE 161 (257)
Q Consensus 85 vg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg--~~ri~Hg~~l-~~~~~~~l~~~~i~v~ 161 (257)
+.+...|.| ...+ .+.++++.+++.|+.+++...-.. ++.+....+.| .+++.-++.. +++..+.+....
T Consensus 145 v~~sggGEP-ll~~-~l~~ll~~~~~~g~~i~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~---- 217 (342)
T 2yx0_A 145 AAISLSGEP-MLYP-YMGDLVEEFHKRGFTTFIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPM---- 217 (342)
T ss_dssp EEECSSSCG-GGST-THHHHHHHHHHTTCEEEEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBS----
T ss_pred EEEcCCCcc-cchh-hHHHHHHHHHHCCCcEEEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCC----
Confidence 444333444 3334 788999999999998888875443 44444555566 7788777765 677777765311
Q ss_pred ecccccceeccccCCCcccHHHHHhcCCCEEecCC-CCCCCCCChHHHHHHHHH
Q 025169 162 ICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTD-DSGVFSTSVSREYDLAAS 214 (257)
Q Consensus 162 ~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD-~~~~~~~~l~~E~~~a~~ 214 (257)
-+.+.-. -..-+..+.+.|+++.+.+. .++.+..+ .+++...+.
T Consensus 218 -~~~~~~~-------~~~~i~~l~~~g~~v~i~~~l~~g~n~~~-~~~l~~~l~ 262 (342)
T 2yx0_A 218 -IPDGWER-------ILRFLELMRDLPTRTVVRLTLVKGENMHS-PEKYAKLIL 262 (342)
T ss_dssp -SSCHHHH-------HHHHHHHHTTCSSEEEEEEEECTTTTCCC-HHHHHHHHH
T ss_pred -cccHHHH-------HHHHHHHHHhCCCCEEEEEEEECCccHHH-HHHHHHHHH
Confidence 0111100 01236677778888877775 33333344 455544444
No 190
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=54.38 E-value=86 Score=25.43 Aligned_cols=96 Identities=10% Similarity=-0.022 Sum_probs=51.0
Q ss_pred HHHHHHHHhhCCCceEEEecc-CC---CCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE-eeccc
Q 025169 70 METVKLALEMRDLGVVGIDLS-GN---PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI-GHACC 144 (257)
Q Consensus 70 ~~~~~~~~~~~~~~vvg~~l~-g~---~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~Hg~~ 144 (257)
.+.++...+...+ .+.+|+- |. ..++.+..++.+.+.. ..++++.+|.-=......+..+.+.|++.+ .|+-.
T Consensus 20 ~~~i~~l~~~g~d-~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~-~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea 97 (228)
T 3ovp_A 20 GAECLRMLDSGAD-YLHLDVMDGHFVPNITFGHPVVESLRKQL-GQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEA 97 (228)
T ss_dssp HHHHHHHHHTTCS-CEEEEEEBSSSSSCBCBCHHHHHHHHHHH-CSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHcCCC-EEEEEecCCCcCcccccCHHHHHHHHHhh-CCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCC
Confidence 3444444444433 5566643 21 1233444344332211 025666666542222346777778899864 68754
Q ss_pred cc--HHHHHHHhcCCC--cEEeccccc
Q 025169 145 FE--EEEWRKLKSSKI--PVEICLTSN 167 (257)
Q Consensus 145 l~--~~~~~~l~~~~i--~v~~cP~SN 167 (257)
.+ .+.++.+++.|+ .++++|...
T Consensus 98 ~~~~~~~i~~i~~~G~k~gval~p~t~ 124 (228)
T 3ovp_A 98 TENPGALIKDIRENGMKVGLAIKPGTS 124 (228)
T ss_dssp CSCHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred chhHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 32 357888888775 556676554
No 191
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=53.66 E-value=77 Score=27.25 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=41.9
Q ss_pred HHHHHHHHHc-CCceeeecCCCCCHhhHHHHHhcCCcEEe--ecccccHHHHHHHhcCCCcEEec
Q 025169 102 LPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRIG--HACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 102 ~~~~~~A~~~-gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~--Hg~~l~~~~~~~l~~~~i~v~~c 163 (257)
.++++..++. ++++.+-. ..++-++.+++.|++.|- .|...+++.++.+++.|+++++.
T Consensus 74 ~pvI~~l~~~~~vpiSIDT---~~~~Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvlm 135 (314)
T 2vef_A 74 VPVIKAIRKESDVLISIDT---WKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIM 135 (314)
T ss_dssp HHHHHHHHHHCCCEEEEEC---SCHHHHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHhhCCceEEEeC---CCHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEEE
Confidence 3445555544 89988865 456777889999998774 33334678888999999888765
No 192
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=52.43 E-value=1.2e+02 Score=26.52 Aligned_cols=69 Identities=10% Similarity=0.004 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEeccC-----CC----C----------------CCChhcHHHHHHHHHHcCCceeee
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDLSG-----NP----T----------------KGEWTTFLPALKFAREQGLQITLH 118 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l~g-----~~----~----------------~~~~~~~~~~~~~A~~~gl~v~~H 118 (257)
.+.+.+.+.++.+.+...+ .+-+...- .+ + ..+.+.++.+++.+++.|+++..=
T Consensus 32 gs~e~a~~li~~ak~aGad-avKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st 110 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAE-VVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFIST 110 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCS-EEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCC-EEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 4678888888888776655 33333110 01 1 145677899999999999998765
Q ss_pred cCCCCCHhhHHHHHhcCC
Q 025169 119 CGEIPNKEEIQSMLDFLP 136 (257)
Q Consensus 119 a~E~~~~~~i~~~l~lg~ 136 (257)
. .+..++....++++
T Consensus 111 ~---~d~~svd~l~~~~v 125 (349)
T 2wqp_A 111 L---FSRAAALRLQRMDI 125 (349)
T ss_dssp E---CSHHHHHHHHHHTC
T ss_pred e---CCHHHHHHHHhcCC
Confidence 4 44444433333333
No 193
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=52.38 E-value=19 Score=31.89 Aligned_cols=87 Identities=14% Similarity=0.065 Sum_probs=48.0
Q ss_pred CChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHH----HhcCC-cEEeeccccc----H----HHHHHHhcCCCcEEe
Q 025169 96 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSM----LDFLP-QRIGHACCFE----E----EEWRKLKSSKIPVEI 162 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~----l~lg~-~ri~Hg~~l~----~----~~~~~l~~~~i~v~~ 162 (257)
.+.+.+.++++.+++.|.++++|+ |. ...+... ...|. +.+.|..... + +.+++.++.|+.+.+
T Consensus 159 ~~~~~~~~~~~~a~~~~~~v~~H~-e~--~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~ 235 (457)
T 1nfg_A 159 IDDVTLLKTLDKAVKTGSLVMVHA-EN--GDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYI 235 (457)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEC-CC--HHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeC-CC--HHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEE
Confidence 456778888899999999999998 33 3333222 33565 4566764322 1 233444566766543
Q ss_pred cccccceeccccCCCcccHHHHHhcCCCEE
Q 025169 163 CLTSNIRTETISSLDIHHFVDLYKAQHPLV 192 (257)
Q Consensus 163 cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~ 192 (257)
+=.+|.. ....+.++.+.|++|.
T Consensus 236 ~H~~~~~-------~~~~~~~~~~~G~~v~ 258 (457)
T 1nfg_A 236 VHVTCEE-------SLEEVMRAKSRGVRAL 258 (457)
T ss_dssp CCCCSHH-------HHHHHHHHHHHTCCEE
T ss_pred EeCCcHH-------HHHHHHHHHHcCCeEE
Confidence 3323211 1123444555676653
No 194
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=52.28 E-value=32 Score=30.35 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=25.1
Q ss_pred EEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCC
Q 025169 85 VGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP 123 (257)
Q Consensus 85 vg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~ 123 (257)
+-+|.+..++.-..+..+++++.|+..|+.|-+=.|...
T Consensus 141 VMiDgS~~p~eENI~~Tkevv~~ah~~gvsVEaELG~vG 179 (358)
T 1dos_A 141 HMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTG 179 (358)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred EeecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecccc
Confidence 445544333222346678899999999988877766443
No 195
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=51.34 E-value=1e+02 Score=26.41 Aligned_cols=129 Identities=12% Similarity=0.079 Sum_probs=65.0
Q ss_pred EEEEeeCCC-CHHHHHHHHHHHHhhCCCceEEEeccCC--CC---------CCChhcH----HHHHHHHHHcCCceeeec
Q 025169 56 LLLSIDRRE-TTEAAMETVKLALEMRDLGVVGIDLSGN--PT---------KGEWTTF----LPALKFAREQGLQITLHC 119 (257)
Q Consensus 56 li~~~~r~~-~~e~~~~~~~~~~~~~~~~vvg~~l~g~--~~---------~~~~~~~----~~~~~~A~~~gl~v~~Ha 119 (257)
++..+.-.+ +++.+.+.++...+ .|+.|+.+-+. +. -.|.+++ +.+.+.+++.|..+.+-+
T Consensus 91 viaD~d~Gyg~~~~v~~~v~~l~~---aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~A 167 (307)
T 3lye_A 91 LIADMDTGYGGPIMVARTVEHYIR---SGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIA 167 (307)
T ss_dssp EEEECTTCSSSHHHHHHHHHHHHH---TTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHHH---cCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 444444432 46666666665554 24555555321 11 1244443 333333344465555544
Q ss_pred C-CCCCHhhHHHHH-------hcCCcE-EeecccccHHHHHHHhcC--CCcEEecccccceeccccCCCcccHHHHHhcC
Q 025169 120 G-EIPNKEEIQSML-------DFLPQR-IGHACCFEEEEWRKLKSS--KIPVEICLTSNIRTETISSLDIHHFVDLYKAQ 188 (257)
Q Consensus 120 ~-E~~~~~~i~~~l-------~lg~~r-i~Hg~~l~~~~~~~l~~~--~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~G 188 (257)
- +......+.+++ +.|+|- ..||.. ++++++.+.+. ++++..+.+.. +.. ...+..+|.+.|
T Consensus 168 RTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~-~~~~~~~i~~~~~~~Pv~~n~~~~---g~~---p~~t~~eL~~lG 240 (307)
T 3lye_A 168 RTDALQSLGYEECIERLRAARDEGADVGLLEGFR-SKEQAAAAVAALAPWPLLLNSVEN---GHS---PLITVEEAKAMG 240 (307)
T ss_dssp EECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCS-CHHHHHHHHHHHTTSCBEEEEETT---SSS---CCCCHHHHHHHT
T ss_pred echhhhccCHHHHHHHHHHHHHCCCCEEEecCCC-CHHHHHHHHHHccCCceeEEeecC---CCC---CCCCHHHHHHcC
Confidence 2 111111222222 369985 567763 67777777654 45553332211 111 234678999999
Q ss_pred CCEEec
Q 025169 189 HPLVLC 194 (257)
Q Consensus 189 v~v~lg 194 (257)
+++.+.
T Consensus 241 v~~v~~ 246 (307)
T 3lye_A 241 FRIMIF 246 (307)
T ss_dssp CSEEEE
T ss_pred CeEEEE
Confidence 998864
No 196
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=51.04 E-value=98 Score=25.10 Aligned_cols=143 Identities=7% Similarity=-0.005 Sum_probs=72.0
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeC---CCCH----HHHHHHHHHHHhhCCCceEEEe
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDR---RETT----EAAMETVKLALEMRDLGVVGID 88 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r---~~~~----e~~~~~~~~~~~~~~~~vvg~~ 88 (257)
.+.++|++.. ........ -++-+++..+..++.|+++..+-.... .... +...+.++.+.....+.++. .
T Consensus 28 G~~~vEl~~~-~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~-~ 104 (286)
T 3dx5_A 28 GFEGIELWGT-HAQNLYMQ-EYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRT-F 104 (286)
T ss_dssp TCCEEEEEHH-HHHHHHHH-CHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEE-C
T ss_pred CCCEEEEccc-cccccccc-CHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEE-c
Confidence 4789999652 10000000 123455566778888998766533221 1112 23345666666666553432 2
Q ss_pred ccCCCC-CCC-------hhcHHHHHHHHHHcCCceeeecCCCC---CHhhHHHHHh-cCCcE------Eeecccc--cH-
Q 025169 89 LSGNPT-KGE-------WTTFLPALKFAREQGLQITLHCGEIP---NKEEIQSMLD-FLPQR------IGHACCF--EE- 147 (257)
Q Consensus 89 l~g~~~-~~~-------~~~~~~~~~~A~~~gl~v~~Ha~E~~---~~~~i~~~l~-lg~~r------i~Hg~~l--~~- 147 (257)
....+. ..+ .+.+.++.+.|+++|+.+.+|..... .+..+...++ .+... ++|.... ++
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~~D~~h~~~~g~d~~ 184 (286)
T 3dx5_A 105 AGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDHPNLKINLDFLHIWESGADPV 184 (286)
T ss_dssp SCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTTEEEEEEHHHHHHTTCCHH
T ss_pred CCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCCCCeEEEeccccHhhcCCCHH
Confidence 211111 112 14466778889999999999875432 2334444443 34322 3566543 32
Q ss_pred HHHHHHhcCCCcEEe
Q 025169 148 EEWRKLKSSKIPVEI 162 (257)
Q Consensus 148 ~~~~~l~~~~i~v~~ 162 (257)
+.++.+.. .+..+|
T Consensus 185 ~~l~~~~~-~i~~vH 198 (286)
T 3dx5_A 185 DSFQQLRP-WIQHYH 198 (286)
T ss_dssp HHHHHHGG-GEEEEE
T ss_pred HHHHHHHh-HheEEE
Confidence 34555553 344444
No 197
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=50.63 E-value=88 Score=25.22 Aligned_cols=95 Identities=11% Similarity=0.031 Sum_probs=57.0
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEee--C-CCCH-HHHHHHHHHHHhhCCCceEEEeccC
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID--R-RETT-EAAMETVKLALEMRDLGVVGIDLSG 91 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~--r-~~~~-e~~~~~~~~~~~~~~~~vvg~~l~g 91 (257)
.+.++|++..... . .+ -++++.+..++.|+++..+.... . .... +...+.++.+.....+.++ +....
T Consensus 36 G~~~vEl~~~~~~--~----~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~-~~~g~ 107 (264)
T 1yx1_A 36 GAQRVELREELFA--G----PP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLK-VSLGL 107 (264)
T ss_dssp TCSEEEEEGGGCS--S----CC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEE-EEEEC
T ss_pred CCCEEEEEHHhcC--C----CH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEE-EecCC
Confidence 5889999865211 0 11 34455566778888875443211 1 1122 4567788888877766433 22221
Q ss_pred CCCCCChhcHHHHHHHHHHcCCceeeecCC
Q 025169 92 NPTKGEWTTFLPALKFAREQGLQITLHCGE 121 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E 121 (257)
.. +...++++.+.|++.|+.+.+|...
T Consensus 108 ~~---~~~~l~~l~~~a~~~Gv~l~lEn~~ 134 (264)
T 1yx1_A 108 LP---EQPDLAALGRRLARHGLQLLVENDQ 134 (264)
T ss_dssp CC---SSCCHHHHHHHHTTSSCEEEEECCS
T ss_pred CC---cHHHHHHHHHHHHhcCCEEEEecCC
Confidence 11 1237899999999999999998753
No 198
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=49.84 E-value=1.1e+02 Score=25.40 Aligned_cols=55 Identities=18% Similarity=0.072 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCC-------hhcHHHHHHHHHHcCCceeeecC
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGE-------WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~-------~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
.+.+.+.+.++.+.+...+ ++-+... .+.+.+ .+.++.+.+.+++.|+++..=.-
T Consensus 34 ~~~e~a~~~a~~l~~~Ga~-~vk~~~f-kprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~ 95 (262)
T 1zco_A 34 ESREQIMKVAEFLAEVGIK-VLRGGAF-KPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVM 95 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCC-EEECBSS-CCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCC-EEEEEec-ccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeC
Confidence 4688888888887775544 4433332 122211 56688888889999999876553
No 199
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=49.42 E-value=1e+02 Score=24.74 Aligned_cols=99 Identities=10% Similarity=-0.024 Sum_probs=54.0
Q ss_pred ccceeeee-ccC-ccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCC--CCH-------HHHHHHHHHHHhhCCCce
Q 025169 16 AVSAVDVD-FAS-RSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRR--ETT-------EAAMETVKLALEMRDLGV 84 (257)
Q Consensus 16 ~v~y~E~r-~~p-~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~--~~~-------e~~~~~~~~~~~~~~~~v 84 (257)
.+.++|++ ... ..+.. +.-+++..+..++.|+++..+.+...- .++ +...+.++.+.....+.+
T Consensus 27 G~~~vEl~~~~~~~~~~~-----~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v 101 (278)
T 1i60_A 27 GYDYIEIRTMDKLPEYLK-----DHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYV 101 (278)
T ss_dssp TCSEEEEETTTHHHHHTT-----SSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEccHHHHHHHhc-----cCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 57899999 542 11111 123445556778899997644333221 122 233455566666665544
Q ss_pred EEEeccCCCCCCC--------hhcHHHHHHHHHHcCCceeeecC
Q 025169 85 VGIDLSGNPTKGE--------WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 85 vg~~l~g~~~~~~--------~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+. .....+...+ .+.++++.+.|+++|+.+.+|..
T Consensus 102 ~~-~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 144 (278)
T 1i60_A 102 VA-VPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFV 144 (278)
T ss_dssp EE-ECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred EE-ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 33 2211111122 13456677888899999998865
No 200
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=49.32 E-value=1e+02 Score=24.79 Aligned_cols=99 Identities=12% Similarity=-0.030 Sum_probs=53.0
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHH--------HHHHHHHHHHhhCCCceEEE
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTE--------AAMETVKLALEMRDLGVVGI 87 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e--------~~~~~~~~~~~~~~~~vvg~ 87 (257)
.+.++|++..+... ...+.-+++..+..++.|+++..+.....-.+++ ...+.++.+.....+.++.
T Consensus 29 G~~~vEl~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~- 103 (281)
T 3u0h_A 29 GYRYVDVPFHWLEA----EAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTA- 103 (281)
T ss_dssp TCSEECCCHHHHHH----HHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEE-
T ss_pred CCCEEEecHHHHHH----HhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEE-
Confidence 47889998873210 0012234556677888999875433221111221 1234555566555554442
Q ss_pred eccCCCCCCC--------hhcHHHHHHHHHHcCCceeeecC
Q 025169 88 DLSGNPTKGE--------WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 88 ~l~g~~~~~~--------~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
.+.+.. ..+ .+.+.++.+.|+++|+.+.+|..
T Consensus 104 ~~~p~~-~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 143 (281)
T 3u0h_A 104 FLWPSM-DEEPVRYISQLARRIRQVAVELLPLGMRVGLEYV 143 (281)
T ss_dssp ECCSEE-SSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred eecCCC-CCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 222110 111 14466777888999999999864
No 201
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=49.09 E-value=67 Score=29.00 Aligned_cols=25 Identities=36% Similarity=0.522 Sum_probs=17.6
Q ss_pred hcHHHHHHHHHHcCCceee-ec-CCCC
Q 025169 99 TTFLPALKFAREQGLQITL-HC-GEIP 123 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~-Ha-~E~~ 123 (257)
.+..++.+.|+.+|+++.+ |. +|+.
T Consensus 350 tea~~ia~lA~~~g~~~~~sh~~gEt~ 376 (439)
T 2akz_A 350 TEAIQACKLAQENGWGVMVSHRSGETE 376 (439)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHCCCeEEeecCCCccH
Confidence 4456677888889998655 85 5764
No 202
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=48.04 E-value=85 Score=29.35 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=52.5
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHc-CCceeeecCCCCCHhhHHHHHhc--CCcEEeecccc-c--HHHHHHHhcCC
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDF--LPQRIGHACCF-E--EEEWRKLKSSK 157 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~-gl~v~~Ha~E~~~~~~i~~~l~l--g~~ri~Hg~~l-~--~~~~~~l~~~~ 157 (257)
++.+++ |.+.....+++++++...++. ++|+.+-. ..++-++.+++. |++.|.--... + ++.++++++.|
T Consensus 356 iIDIgp-g~~~v~~~ee~~rvv~~i~~~~~vpisIDT---~~~~v~eaal~~~~G~~iINdis~~~~~~~~~~~~~~~~g 431 (566)
T 1q7z_A 356 VLDVNF-GIESQIDVRYVEKIVQTLPYVSNVPLSLDI---QNVDLTERALRAYPGRSLFNSAKVDEEELEMKINLLKKYG 431 (566)
T ss_dssp EEEEEC-SSGGGSCHHHHHHHHHHHHHHTCSCEEEEC---CCHHHHHHHHHHCSSCCEEEEEESCHHHHHHHHHHHHHHC
T ss_pred EEEECC-CCCCCCHHHHHHHHHHHHHhhCCceEEEeC---CCHHHHHHHHHhcCCCCEEEECCcchhhHHHHHHHHHHhC
Confidence 666664 333234567888887776554 89998865 456777788887 88765321112 3 56688889999
Q ss_pred CcEEecccc
Q 025169 158 IPVEICLTS 166 (257)
Q Consensus 158 i~v~~cP~S 166 (257)
.++++.+..
T Consensus 432 ~~vV~m~~~ 440 (566)
T 1q7z_A 432 GTLIVLLMG 440 (566)
T ss_dssp CEEEEESCS
T ss_pred CeEEEEeCC
Confidence 998877653
No 203
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=46.68 E-value=1.1e+02 Score=24.36 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=51.8
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeC-------CC--C-------HHHHHHHHHHHHhh
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDR-------RE--T-------TEAAMETVKLALEM 79 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r-------~~--~-------~e~~~~~~~~~~~~ 79 (257)
.+.++|+.+ |. +.+ +++..+..++.|+++..+.+... .. + .+...+.++.+...
T Consensus 28 G~~~vEl~~-~~-----~~~----~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (260)
T 1k77_A 28 GFDAVEFLF-PY-----NYS----TLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALAL 97 (260)
T ss_dssp TCSEEECSC-CT-----TSC----HHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEecC-CC-----CCC----HHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 578899986 42 112 34455667788998876533210 00 1 12345566666666
Q ss_pred CCCceEEEeccCCCCCCC--------hhcHHHHHHHHHHcCCceeeecC
Q 025169 80 RDLGVVGIDLSGNPTKGE--------WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 80 ~~~~vvg~~l~g~~~~~~--------~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
..+ .+.+.....+...+ .+.++++.+.|+++|+.+.+|..
T Consensus 98 G~~-~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 145 (260)
T 1k77_A 98 NCE-QVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEAL 145 (260)
T ss_dssp TCS-EEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCC
T ss_pred CCC-EEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 554 33332211121222 13456677888899999998764
No 204
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=46.66 E-value=1.6e+02 Score=26.35 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=27.3
Q ss_pred hhcHHHHHHHHHHcCCceee-ecC-CCCCHhhHHHHHhcCCcEEeec
Q 025169 98 WTTFLPALKFAREQGLQITL-HCG-EIPNKEEIQSMLDFLPQRIGHA 142 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~-Ha~-E~~~~~~i~~~l~lg~~ri~Hg 142 (257)
.....++.+.|+++|+++.+ |.. |+.......-++.+++..+--|
T Consensus 360 itea~~ia~lA~~~g~~v~~~h~~get~i~~~a~lava~~~~~i~~G 406 (444)
T 1w6t_A 360 LTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTG 406 (444)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHCCCeEEecCCCCCchHHHHHHHHHhcCCCcccCC
Confidence 34566778889999999998 876 7743222222333455555444
No 205
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=46.24 E-value=1.2e+02 Score=27.14 Aligned_cols=47 Identities=19% Similarity=0.255 Sum_probs=27.1
Q ss_pred ChhcHHHHHHHHHHcCCceee-ecC-CCCCHhhHHHHHhcCCcEEeecc
Q 025169 97 EWTTFLPALKFAREQGLQITL-HCG-EIPNKEEIQSMLDFLPQRIGHAC 143 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~-Ha~-E~~~~~~i~~~l~lg~~ri~Hg~ 143 (257)
...+..++.+.|+++|+++.+ |.. |+.......-++.+++..+--|.
T Consensus 347 Gite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~la~a~~~~~i~~G~ 395 (431)
T 2fym_A 347 SLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGS 395 (431)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHHHHHhcCCCccccCC
Confidence 345667788888999999876 544 76432222223334555554443
No 206
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=46.04 E-value=38 Score=30.38 Aligned_cols=38 Identities=8% Similarity=0.144 Sum_probs=25.7
Q ss_pred hhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCC
Q 025169 40 MNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRD 81 (257)
Q Consensus 40 ~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~ 81 (257)
++++++.+++.|+...++.++ +.++..+.++++.+|..
T Consensus 40 ~~~vl~rA~~~GV~~ii~~g~----~l~~s~~~~~La~~~~~ 77 (401)
T 3e2v_A 40 YVKLLERAAQRHVKNALVTGS----SIAESQSAIELVSSVKD 77 (401)
T ss_dssp HHHHHHHHHHTTEEEEEECCC----SHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEEecC----CHHHHHHHHHHHHHCCC
Confidence 344445555668887666543 46777888999988865
No 207
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=45.94 E-value=63 Score=25.77 Aligned_cols=36 Identities=14% Similarity=0.076 Sum_probs=21.2
Q ss_pred CHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcE
Q 025169 124 NKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPV 160 (257)
Q Consensus 124 ~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v 160 (257)
..+.+..+++.|++-+ |.-..+.+.++..++.|+.+
T Consensus 72 ~~d~~~~A~~~GAd~v-~~~~~d~~v~~~~~~~g~~~ 107 (207)
T 2yw3_A 72 SPKEAEAALEAGAAFL-VSPGLLEEVAALAQARGVPY 107 (207)
T ss_dssp SHHHHHHHHHHTCSEE-EESSCCHHHHHHHHHHTCCE
T ss_pred eHHHHHHHHHcCCCEE-EcCCCCHHHHHHHHHhCCCE
Confidence 3455566666677654 54455666666666666553
No 208
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=45.57 E-value=1.5e+02 Score=25.61 Aligned_cols=167 Identities=13% Similarity=0.055 Sum_probs=92.6
Q ss_pred cCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHH----hh---CCCceEEEeccCCCCCCCh----hc
Q 025169 32 RRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLAL----EM---RDLGVVGIDLSGNPTKGEW----TT 100 (257)
Q Consensus 32 ~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~----~~---~~~~vvg~~l~g~~~~~~~----~~ 100 (257)
-|-+.++++..+. ..++.|+++.+-+..--..+.+++.+..+... .. .....+.+.+.+--...++ +-
T Consensus 57 aGet~~ea~~~~~-~l~~~G~~~~ld~lgE~~~~~~~a~~~~~~yl~~i~~i~~~~~~~~vSvKlSalg~~~~~~~~~~r 135 (327)
T 2ekg_A 57 AGETLEEALKAAE-ALEREGVHAILDLLGEMVRTEEEARAFQRGLLELVWALAGKPWPKYISLXLTQLGLDLSEDLALAL 135 (327)
T ss_dssp CCSSHHHHHHHHH-HHHHTTCEEEEEEECSCCCSHHHHHHHHHHHHHHHHHHTTCSSCEEEEECGGGGTTTTCHHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHhCCCEEEEeccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEcccCccccCHHHHHHH
Confidence 4566666665443 34556888655544433345555544433222 22 1223566666632222333 34
Q ss_pred HHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-c--C-CcEEeecc--cc--cHHHHHHHhcCCCcEEecccccceecc
Q 025169 101 FLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-F--L-PQRIGHAC--CF--EEEEWRKLKSSKIPVEICLTSNIRTET 172 (257)
Q Consensus 101 ~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-l--g-~~ri~Hg~--~l--~~~~~~~l~~~~i~v~~cP~SN~~l~~ 172 (257)
+.++++.|++.|+.+++-+.|+...+.+.+.++ + . -..++=-+ ++ ++++++.+...++.+=+|-..++-...
T Consensus 136 l~~i~~~A~~~gv~v~IDaEe~~~~~~tl~l~~~l~~~~~~~vg~tlQAYLkrt~~~l~~L~~~~~~vRLVKGAY~e~E~ 215 (327)
T 2ekg_A 136 LREVLREAEPRGVFVRLDMEDSPRVEATLRLYRALREEGFSQVGIVLQSYLYRTEKDLLDLLPYRPNLRLVKGAYREPKE 215 (327)
T ss_dssp HHHHHHHHGGGTEEEEECCCCGGGHHHHHHHHHHHHHTTCCSEEEEEETTBTTHHHHHHHHGGGCCCEEEECCCSCCCTT
T ss_pred HHHHHHHHHHcCCEEEEcCccccchHHHHHHHHHHhhcCCCceEEEEeCcccccHHHHHHHhCCCCceEEccCCCcCccc
Confidence 577889999999999999877643332222222 1 2 12333222 23 578888888777777666655543221
Q ss_pred --ccCCC------cccHHHHHhcCCCEEecCCCCC
Q 025169 173 --ISSLD------IHHFVDLYKAQHPLVLCTDDSG 199 (257)
Q Consensus 173 --~~~~~------~~pi~~l~~~Gv~v~lgTD~~~ 199 (257)
+++.. ..-+..+++.+..+.++|-|+-
T Consensus 216 ~~~~~K~~tD~~Y~~~~~~lL~~~~~~~vATHN~~ 250 (327)
T 2ekg_A 216 VAFPDKRLIDAEYLHLGKLALKEGLYVAFATHDPR 250 (327)
T ss_dssp TBCSCHHHHHHHHHHHHHHHHHTTCCEEEECCCHH
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCCceeEeCCCHH
Confidence 11100 1125778888889999998863
No 209
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=44.51 E-value=89 Score=25.11 Aligned_cols=138 Identities=8% Similarity=-0.007 Sum_probs=68.4
Q ss_pred hHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCC-CCCChhcHHHHHHHHHHcCC-------
Q 025169 42 DACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNP-TKGEWTTFLPALKFAREQGL------- 113 (257)
Q Consensus 42 ~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~-~~~~~~~~~~~~~~A~~~gl------- 113 (257)
.+++.+++.|+...++.+.. ++...+..+++.++.+ ...++++.+.. ...+.+.+.++.+...+.+-
T Consensus 23 ~~l~~~~~~Gv~~~v~~~~~----~~~~~~~~~l~~~~~~-~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGE 97 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPATE----AENFARVLALAENYQP-LYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGE 97 (259)
T ss_dssp HHHHHHHHTTEEEEEEECCS----GGGHHHHHHHHHHCTT-EEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEecCC----HHHHHHHHHHHHhCCC-eEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 34444556788877665443 2333455566666653 23344443211 11122334444444443111
Q ss_pred -ceeeecCCCCCH-h--h----HHHHHhcCCcEEeecccccHHHHHHHhcCCC---cEEecccccceeccccCCCcccHH
Q 025169 114 -QITLHCGEIPNK-E--E----IQSMLDFLPQRIGHACCFEEEEWRKLKSSKI---PVEICLTSNIRTETISSLDIHHFV 182 (257)
Q Consensus 114 -~v~~Ha~E~~~~-~--~----i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i---~v~~cP~SN~~l~~~~~~~~~pi~ 182 (257)
.+..|....... + . +..+.++|.-.+-|+....++.++++++.+. .+.||-+.+ ..-+.
T Consensus 98 iGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~~~~~~il~~~~~~~~~i~H~~~g~----------~~~~~ 167 (259)
T 1zzm_A 98 IGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGS----------LQQAE 167 (259)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHHCCTTCEEETTCCSC----------HHHHH
T ss_pred eccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccHHHHHHHHHhcCCCCCEEEEcCCCC----------HHHHH
Confidence 111222111001 0 1 1223346777889987766778888887653 234553211 11256
Q ss_pred HHHhcCCCEEec
Q 025169 183 DLYKAQHPLVLC 194 (257)
Q Consensus 183 ~l~~~Gv~v~lg 194 (257)
++++.|+-++++
T Consensus 168 ~~~~~g~~i~~~ 179 (259)
T 1zzm_A 168 RFVQLGYKIGVG 179 (259)
T ss_dssp HHHHTTCEEEEC
T ss_pred HHHHCCCEEEEC
Confidence 788899888876
No 210
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=44.22 E-value=41 Score=29.57 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=24.7
Q ss_pred EEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCC
Q 025169 85 VGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP 123 (257)
Q Consensus 85 vg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~ 123 (257)
+-+|.+.-+..-..+..+++++.|+..|+.|-.=.|...
T Consensus 128 VMiDgS~lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iG 166 (349)
T 3elf_A 128 HMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVG 166 (349)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCB
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence 444444322222335677889999999998887766554
No 211
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=43.91 E-value=57 Score=27.76 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHhhCCC-ceEEEeccCCCCCCCh-hcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 65 TTEAAMETVKLALEMRDL-GVVGIDLSGNPTKGEW-TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~-~vvg~~l~g~~~~~~~-~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
+|+++.+.++.. .-+ .-+++|-++..|...| -.|..+-+..+..++|+.+|=|-..+.+.++.++.+|..-+-
T Consensus 156 ~Peea~~Fv~~T---gvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiN 230 (286)
T 1gvf_A 156 DPQEAKRFVELT---GVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVN 230 (286)
T ss_dssp CHHHHHHHHHHH---CCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHH---CCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCeEEE
Confidence 577766665532 222 1234443333333322 334444455555689999998766667788888888876554
No 212
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=43.75 E-value=1.3e+02 Score=24.34 Aligned_cols=113 Identities=4% Similarity=-0.036 Sum_probs=59.3
Q ss_pred EEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCc
Q 025169 58 LSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQ 137 (257)
Q Consensus 58 ~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ 137 (257)
+.+.|..+++.+.+.++.+.+..-+ ++-+.+. ++.....+-+.+++.. .+.+-++-....+.++.+++.|++
T Consensus 20 i~vir~~~~~~~~~~~~al~~gGv~-~iel~~k------~~~~~~~i~~l~~~~~-~l~vgaGtvl~~d~~~~A~~aGAd 91 (224)
T 1vhc_A 20 VPVIALDNADDILPLADTLAKNGLS-VAEITFR------SEAAADAIRLLRANRP-DFLIAAGTVLTAEQVVLAKSSGAD 91 (224)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCC-EEEEETT------STTHHHHHHHHHHHCT-TCEEEEESCCSHHHHHHHHHHTCS
T ss_pred EEEEeCCCHHHHHHHHHHHHHcCCC-EEEEecc------CchHHHHHHHHHHhCc-CcEEeeCcEeeHHHHHHHHHCCCC
Confidence 3455656666666666655543221 3444332 1122223333455553 233333322345667778888888
Q ss_pred EEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCC
Q 025169 138 RIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHP 190 (257)
Q Consensus 138 ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~ 190 (257)
-+ |.-..+++.++..++.|+.+. |. . . ...-+.+.++.|..
T Consensus 92 ~v-~~p~~d~~v~~~ar~~g~~~i--~G------v-~--t~~e~~~A~~~Gad 132 (224)
T 1vhc_A 92 FV-VTPGLNPKIVKLCQDLNFPIT--PG------V-N--NPMAIEIALEMGIS 132 (224)
T ss_dssp EE-ECSSCCHHHHHHHHHTTCCEE--CE------E-C--SHHHHHHHHHTTCC
T ss_pred EE-EECCCCHHHHHHHHHhCCCEE--ec------c-C--CHHHHHHHHHCCCC
Confidence 76 555667777777777776653 31 1 0 01235667777875
No 213
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=43.66 E-value=1.6e+02 Score=26.66 Aligned_cols=25 Identities=32% Similarity=0.497 Sum_probs=16.9
Q ss_pred hcHHHHHHHHHHcCCc-eeeec-CCCC
Q 025169 99 TTFLPALKFAREQGLQ-ITLHC-GEIP 123 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~-v~~Ha-~E~~ 123 (257)
.+..++.+.|+.+|++ +..|. +|+.
T Consensus 371 Tea~kia~lA~~~Gi~~~v~H~sgET~ 397 (449)
T 3uj2_A 371 SETLEAIKMAHKAGYTAVVSHRSGETE 397 (449)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCCCch
Confidence 3455667778888888 66674 5664
No 214
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.40 E-value=1.5e+02 Score=25.17 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHH----HcCCceeeecCCCCCHhhHHHHHh--cCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAR----EQGLQITLHCGEIPNKEEIQSMLD--FLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~----~~gl~v~~Ha~E~~~~~~i~~~l~--lg~~r 138 (257)
+++.+.+..+...+...+ ++.++. |.+.....+++++++...+ ..++|+.+-. ..++-+..+++ .|++.
T Consensus 35 ~~~~a~~~A~~~v~~GAd-iIDIg~-g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT---~~~~V~eaaL~~~~Ga~i 109 (300)
T 3k13_A 35 KYDEALSIARQQVEDGAL-VIDVNM-DDGLLDARTEMTTFLNLIMSEPEIARVPVMIDS---SKWEVIEAGLKCLQGKSI 109 (300)
T ss_dssp CHHHHHHHHHHHHHTTCS-EEEEEC-CCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEEC---SCHHHHHHHHHHCSSCCE
T ss_pred CHHHHHHHHHHHHHCCCC-EEEECC-CCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeC---CCHHHHHHHHHhcCCCCE
Confidence 345544444433333333 555544 3222223466777766554 3588988875 45666778887 47765
Q ss_pred Eeecccc--cH---HHHHHHhcCCCcEEeccc
Q 025169 139 IGHACCF--EE---EEWRKLKSSKIPVEICLT 165 (257)
Q Consensus 139 i~Hg~~l--~~---~~~~~l~~~~i~v~~cP~ 165 (257)
|---... ++ +.++++++.|.++++.+.
T Consensus 110 INdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 110 VNSISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp EEEECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred EEeCCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 4322222 34 567888899988877665
No 215
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=42.89 E-value=1.3e+02 Score=24.34 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=53.9
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCC----CCH-------HHHHHHHHHHHhhCCCce
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRR----ETT-------EAAMETVKLALEMRDLGV 84 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~----~~~-------e~~~~~~~~~~~~~~~~v 84 (257)
.+.++|++..+. ++-+++..+..++.|+++..+....+. .++ +...+.++.+.....+.+
T Consensus 51 G~~~vEl~~~~~---------~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 51 GVVGFEPGGGGL---------AGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp TCCEEECBSTTC---------GGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CCCEEEecCCch---------HHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 477899887732 234556667788999998654332221 123 223445555655555533
Q ss_pred EEEeccCCCCC----CC-------hhcHHHHHHHHHHcCCceeeecC
Q 025169 85 VGIDLSGNPTK----GE-------WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 85 vg~~l~g~~~~----~~-------~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+ +........ .+ .+.+.++.+.|+++|+.+.+|..
T Consensus 122 ~-~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 167 (287)
T 3kws_A 122 I-IVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL 167 (287)
T ss_dssp E-ECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC
T ss_pred E-EecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 3 222111111 11 24466778889999999999954
No 216
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=42.86 E-value=93 Score=27.99 Aligned_cols=25 Identities=20% Similarity=0.252 Sum_probs=16.8
Q ss_pred hcHHHHHHHHHHcCCceee-ec-CCCC
Q 025169 99 TTFLPALKFAREQGLQITL-HC-GEIP 123 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~-Ha-~E~~ 123 (257)
.+..++.+.|+.+|+++.+ |. +|+.
T Consensus 353 tea~~ia~lA~~~g~~~~~sh~sgEt~ 379 (436)
T 2al1_A 353 SESIKAAQDSFAAGWGVMVSHRSGETE 379 (436)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHcCCeEEEecCCCchH
Confidence 4455677788888887655 75 4654
No 217
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=42.48 E-value=1.3e+02 Score=24.06 Aligned_cols=93 Identities=14% Similarity=0.096 Sum_probs=47.4
Q ss_pred EeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcE
Q 025169 59 SIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQR 138 (257)
Q Consensus 59 ~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~r 138 (257)
.+.|..+++.+.+.++.+.+..-+ ++-+.+. ++.....+-+.++++. .+.+-++-.-..+.+..+++.|++-
T Consensus 20 ~v~r~~~~~~~~~~~~al~~gGv~-~iel~~k------~~~~~~~i~~l~~~~~-~~~vgagtvi~~d~~~~A~~aGAd~ 91 (214)
T 1wbh_A 20 PVIVVKKLEHAVPMAKALVAGGVR-VLNVTLR------TECAVDAIRAIAKEVP-EAIVGAGTVLNPQQLAEVTEAGAQF 91 (214)
T ss_dssp EEECCSSGGGHHHHHHHHHHTTCC-EEEEESC------STTHHHHHHHHHHHCT-TSEEEEESCCSHHHHHHHHHHTCSC
T ss_pred EEEECCCHHHHHHHHHHHHHcCCC-EEEEeCC------ChhHHHHHHHHHHHCc-CCEEeeCEEEEHHHHHHHHHcCCCE
Confidence 445655666666666655443211 3444332 1112222223455543 2222333233456667777778875
Q ss_pred EeecccccHHHHHHHhcCCCcE
Q 025169 139 IGHACCFEEEEWRKLKSSKIPV 160 (257)
Q Consensus 139 i~Hg~~l~~~~~~~l~~~~i~v 160 (257)
+ |.-..+++..+..++.|+.+
T Consensus 92 v-~~p~~d~~v~~~~~~~g~~~ 112 (214)
T 1wbh_A 92 A-ISPGLTEPLLKAATEGTIPL 112 (214)
T ss_dssp E-EESSCCHHHHHHHHHSSSCE
T ss_pred E-EcCCCCHHHHHHHHHhCCCE
Confidence 4 44456777777777777654
No 218
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=42.09 E-value=91 Score=26.61 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=31.7
Q ss_pred hhcHHHHHHHHHH-cCCceeeecCCCCCHhhHHHHHhcCCcEEeecccc
Q 025169 98 WTTFLPALKFARE-QGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF 145 (257)
Q Consensus 98 ~~~~~~~~~~A~~-~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l 145 (257)
.+.+.++++..++ .++.+++..+.. ..+.+....+.|.+++.++...
T Consensus 125 ~~~~~~l~~~ik~~~~i~i~~s~g~~-~~e~l~~L~~aG~~~i~i~lEt 172 (350)
T 3t7v_A 125 PNRFVELVQIVKEELGLPIMISPGLM-DNATLLKAREKGANFLALYQET 172 (350)
T ss_dssp THHHHHHHHHHHHHHCSCEEEECSSC-CHHHHHHHHHTTEEEEECCCBC
T ss_pred HHHHHHHHHHHHhhcCceEEEeCCCC-CHHHHHHHHHcCCCEEEEeeec
Confidence 4566777777764 478887776653 3455555556788888777654
No 219
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=41.64 E-value=1.5e+02 Score=24.71 Aligned_cols=151 Identities=12% Similarity=0.061 Sum_probs=81.5
Q ss_pred ceEEEeccC--C-CCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHH-hcCCc-EEeeccccc----------H
Q 025169 83 GVVGIDLSG--N-PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSML-DFLPQ-RIGHACCFE----------E 147 (257)
Q Consensus 83 ~vvg~~l~g--~-~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l-~lg~~-ri~Hg~~l~----------~ 147 (257)
+++|+-+.. . ........+.++++.+.+ |+++.+|++-. ....+.+.+ .++.. .+.|+-..+ .
T Consensus 119 G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~-~l~~l~~~~~~~~~~iVidH~G~p~~~~g~~~~~~~ 196 (303)
T 4d9a_A 119 GMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEAD-ILEELRPFMDAIPVPIVIDHMGRPDVRQGPDGADMK 196 (303)
T ss_dssp TEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCGG-GHHHHHHHHHHCSSCEEEGGGGCCCGGGCTTSHHHH
T ss_pred CCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEEecccc-cHHHHHHHHHHCCCcEEEeCCCCCCcccCCCCHHHH
Confidence 688877643 1 123355778999999999 99999998632 223333333 35443 478875421 3
Q ss_pred HHHHHHhc-CCCcEEecccccceeccccCC---Cccc-HHHHHhcC-CCEEecCCCCCCCC-C---ChHHHHHHHHHhCC
Q 025169 148 EEWRKLKS-SKIPVEICLTSNIRTETISSL---DIHH-FVDLYKAQ-HPLVLCTDDSGVFS-T---SVSREYDLAASAFS 217 (257)
Q Consensus 148 ~~~~~l~~-~~i~v~~cP~SN~~l~~~~~~---~~~p-i~~l~~~G-v~v~lgTD~~~~~~-~---~l~~E~~~a~~~~~ 217 (257)
+.++++++ .++.+- +|-+.......+ ...| +..+++.+ =+|-.|||-|.... . +...-+..+.....
T Consensus 197 ~~~~l~~~~~NV~vK---lSg~~~~~~~~~~~~~~~~~~~~~~~~~~dRlmfGSDwP~~~~~~~~~~~~~~~~~~~~~~~ 273 (303)
T 4d9a_A 197 AFRRLLDSREDIWFK---ATCPDRLDPAGPPWDDFARSVAPLVADYADRVIWGTAWPHPNMQDAIPDDGLVVDMIPRIAP 273 (303)
T ss_dssp HHHHHHHHCTTEEEE---CCCHHHHCTTCTTCHHHHHHHHHHHHHTTTSEECCCCTTCTTCTTSCCCHHHHHHTHHHHSC
T ss_pred HHHHHHhhCCCEEEE---eeCceecCCCCCCHHHHHHHHHHHHHhCcccEEEecCCCCcccccCCCCHHHHHHHHHHHCC
Confidence 45677776 455433 333221110111 0123 34456654 36999999876543 1 22222222222211
Q ss_pred CCHHHHHHHH-HHHHHHcCCChH
Q 025169 218 LGRREMFQLA-KSAVKFIFANGR 239 (257)
Q Consensus 218 ls~~~v~~~~-~n~~~~~~~~~~ 239 (257)
+.++..++. .|+.+...+++.
T Consensus 274 -~~~~~~~il~~NA~rly~~~~~ 295 (303)
T 4d9a_A 274 -TPELQHKMLVTNPMRLYWSEEM 295 (303)
T ss_dssp -SHHHHHHHHTHHHHHHHCGGGC
T ss_pred -CHHHHHHHHHHHHHHHhCCCcc
Confidence 566666654 788877766543
No 220
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=41.38 E-value=1.5e+02 Score=24.44 Aligned_cols=99 Identities=7% Similarity=0.028 Sum_probs=55.8
Q ss_pred ccceeeeecc-CccccccCCCchhhhhhHhhcccCCCcEEEEEEEee---CCC--CH-------HHHHHHHHHHHhhCCC
Q 025169 16 AVSAVDVDFA-SRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID---RRE--TT-------EAAMETVKLALEMRDL 82 (257)
Q Consensus 16 ~v~y~E~r~~-p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~---r~~--~~-------e~~~~~~~~~~~~~~~ 82 (257)
.+.++|++.. |.... ++-+++..+..++.|+++....... .-. ++ +...+.++.+.....+
T Consensus 49 G~~~vEl~~~~~~~~~------~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~ 122 (309)
T 2hk0_A 49 GFDIIEVAAHHINEYS------DAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIH 122 (309)
T ss_dssp TCSEEEEEHHHHTTSC------HHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEeccCCccccc------hhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5889999876 33211 2445556667788899877643221 111 22 2334566666666666
Q ss_pred ceEEEec--cCCC-CCC-C--------hhcHHHHHHHHHHcCCceeeecC
Q 025169 83 GVVGIDL--SGNP-TKG-E--------WTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 83 ~vvg~~l--~g~~-~~~-~--------~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
.+++... .|.. ... + .+.++++.+.|+++|+.+.+|..
T Consensus 123 ~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 172 (309)
T 2hk0_A 123 TIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVL 172 (309)
T ss_dssp EEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeec
Confidence 5553210 1211 111 2 13456777888999999999875
No 221
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=41.36 E-value=1.4e+02 Score=24.28 Aligned_cols=80 Identities=11% Similarity=0.018 Sum_probs=49.0
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEE-eeccccc--HHHHHHHhcCC
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRI-GHACCFE--EEEWRKLKSSK 157 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri-~Hg~~l~--~~~~~~l~~~~ 157 (257)
.+|+-+......+-...+..+-+.|+++|..+.+...+..... .+..++..+++-| ..+...+ .+.++.+.+.|
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~ 83 (313)
T 3m9w_A 4 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 83 (313)
T ss_dssp EEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCC
Confidence 5665544322233445667777888999999888876543221 2334444577753 3333332 46788999999
Q ss_pred CcEEec
Q 025169 158 IPVEIC 163 (257)
Q Consensus 158 i~v~~c 163 (257)
++++..
T Consensus 84 iPvV~~ 89 (313)
T 3m9w_A 84 IKVLAY 89 (313)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 998764
No 222
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=40.95 E-value=38 Score=28.40 Aligned_cols=97 Identities=9% Similarity=-0.015 Sum_probs=52.2
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEee-CC--CC-----------------HHHHHHHHHH
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID-RR--ET-----------------TEAAMETVKL 75 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~-r~--~~-----------------~e~~~~~~~~ 75 (257)
.+.++|+...+.. .. .+.-.++..+..++.|+++..+.... .. .+ .+...+.++.
T Consensus 42 G~~~VEl~~~~~~-~~----~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (303)
T 3l23_A 42 GYSKLELAGYGKG-AI----GGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAAD 116 (303)
T ss_dssp TCCEEEECCEETT-EE----TTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHH
T ss_pred CCCEEEeccccCc-cc----CCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHHHHHH
Confidence 4789999864310 00 11123455566778899986554321 10 01 1223455566
Q ss_pred HHhhCCCceEEEeccCCCCCCCh-------hcHHHHHHHHHHcCCc--eeeecC
Q 025169 76 ALEMRDLGVVGIDLSGNPTKGEW-------TTFLPALKFAREQGLQ--ITLHCG 120 (257)
Q Consensus 76 ~~~~~~~~vvg~~l~g~~~~~~~-------~~~~~~~~~A~~~gl~--v~~Ha~ 120 (257)
+.....+.++. .. +.. ..+. +.++++.+.|+++|+. +.+|..
T Consensus 117 A~~lG~~~v~~-~~-~~~-~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~ 167 (303)
T 3l23_A 117 HAKLGCKYLIQ-PM-MPT-ITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNH 167 (303)
T ss_dssp HHHTTCSEEEE-CS-CCC-CCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred HHHcCCCEEEE-CC-CCC-CCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccC
Confidence 66665554433 21 211 1222 3466778889999999 988753
No 223
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=40.01 E-value=1.5e+02 Score=25.13 Aligned_cols=44 Identities=14% Similarity=0.003 Sum_probs=32.2
Q ss_pred CCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE
Q 025169 93 PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI 139 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri 139 (257)
|.....+...++++.|++.|+...+-+ .+++..+.+.++|+|.|
T Consensus 144 E~gm~~~~eve~I~~A~~~gL~Ti~~v---~~~eeA~amA~agpDiI 187 (286)
T 2p10_A 144 ETGMSYAQEVEMIAEAHKLDLLTTPYV---FSPEDAVAMAKAGADIL 187 (286)
T ss_dssp HTTCCHHHHHHHHHHHHHTTCEECCEE---CSHHHHHHHHHHTCSEE
T ss_pred hcCCCHHHHHHHHHHHHHCCCeEEEec---CCHHHHHHHHHcCCCEE
Confidence 444566777788888999999888877 45666666667888754
No 224
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=39.75 E-value=1.1e+02 Score=24.50 Aligned_cols=80 Identities=8% Similarity=-0.021 Sum_probs=47.1
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcE-EeecccccHHHHHHHhcCCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQR-IGHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~~~i 158 (257)
..+|+-+......+-...+..+-+.|+++|..+.+......... .+...+..+++- |..+... ++.++.+.+.|+
T Consensus 8 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~l~~~~i 86 (276)
T 3jy6_A 8 KLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN-PQTVQEILHQQM 86 (276)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC-HHHHHHHHTTSS
T ss_pred cEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc-HHHHHHHHHCCC
Confidence 46776553321112234556667778889999888775542221 122333346664 3344444 778889999999
Q ss_pred cEEec
Q 025169 159 PVEIC 163 (257)
Q Consensus 159 ~v~~c 163 (257)
+++..
T Consensus 87 PvV~i 91 (276)
T 3jy6_A 87 PVVSV 91 (276)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98764
No 225
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=39.19 E-value=1.3e+02 Score=25.03 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=48.2
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcE-EeecccccHHHHHHHhcCCCc
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQR-IGHACCFEEEEWRKLKSSKIP 159 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~~~i~ 159 (257)
.+|+-+......+-...+..+-+.|+++|..+.+......... .+...+..+++- |-.+...++..++.+.+.|++
T Consensus 70 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iP 149 (344)
T 3kjx_A 70 LVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSEAARAMLDAAGIP 149 (344)
T ss_dssp EEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCHHHHHHHHHCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHhCCCC
Confidence 6776553322222335566677778889998887655432221 122333456764 344455567788889999999
Q ss_pred EEec
Q 025169 160 VEIC 163 (257)
Q Consensus 160 v~~c 163 (257)
++..
T Consensus 150 vV~i 153 (344)
T 3kjx_A 150 VVEI 153 (344)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 226
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=39.02 E-value=83 Score=25.67 Aligned_cols=139 Identities=14% Similarity=0.141 Sum_probs=74.3
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEe------e------------CCCC----HHHHHHHH
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSI------D------------RRET----TEAAMETV 73 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~------~------------r~~~----~e~~~~~~ 73 (257)
.+.++|++..... ..+ ++-+++..+..++.|+++..+.+. . +... .+...+.+
T Consensus 34 G~~~vEl~~~~~~----~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 108 (290)
T 3tva_A 34 KVPTVQVHAPHPH----TRT-REHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEIS 108 (290)
T ss_dssp TCSEEEEECCCGG----GCS-HHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHH
T ss_pred CCCEEEecCCCCC----cCC-HHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence 4788999985321 122 344666667788999998766431 0 1001 13345566
Q ss_pred HHHHhhCCCceEEEeccCCCCCCC------hhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCcE------Ee
Q 025169 74 KLALEMRDLGVVGIDLSGNPTKGE------WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQR------IG 140 (257)
Q Consensus 74 ~~~~~~~~~~vvg~~l~g~~~~~~------~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~r------i~ 140 (257)
+.+.....+.+ .+.....+.... .+.++++.+.|+++|+.+.+|..- ..+..+...++ .+... ++
T Consensus 109 ~~a~~lG~~~v-~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~-~~~~~~~~l~~~~~~~~~g~~~D~~ 186 (290)
T 3tva_A 109 DFASWVGCPAI-GLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ-ESADHLLEFIEDVNRPNLGINFDPA 186 (290)
T ss_dssp HHHHHHTCSEE-EECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS-SCHHHHHHHHHHHCCTTEEEEECHH
T ss_pred HHHHHcCCCEE-EEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC-CCHHHHHHHHHhcCCCCEEEEeccH
Confidence 66666665533 332211111111 134667788889999999998753 23445444444 34322 35
Q ss_pred ecccc---cH-HHHHHHhcCCCcEEe
Q 025169 141 HACCF---EE-EEWRKLKSSKIPVEI 162 (257)
Q Consensus 141 Hg~~l---~~-~~~~~l~~~~i~v~~ 162 (257)
|.... ++ +.++.+.. .|..+|
T Consensus 187 h~~~~g~~d~~~~l~~~~~-~i~~vH 211 (290)
T 3tva_A 187 NMILYGTGNPIEALRKVAR-YVRSIH 211 (290)
T ss_dssp HHHHTTCSCHHHHHHHHGG-GEEEEE
T ss_pred HHHHhCCCCHHHHHHHHHh-hheEEE
Confidence 76532 33 44566654 344444
No 227
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=38.79 E-value=97 Score=24.96 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=47.8
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEE-eeccccc--HHHHHHHhcC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRI-GHACCFE--EEEWRKLKSS 156 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri-~Hg~~l~--~~~~~~l~~~ 156 (257)
..+|+-+......+-...+..+-+.|+++|..+.+...+..... .+...+..+++-| ..+...+ .+.++.+.+.
T Consensus 9 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~ 88 (293)
T 3l6u_A 9 NIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKA 88 (293)
T ss_dssp CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHT
T ss_pred cEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHc
Confidence 46776553322112234556667778999999888766542221 2334444577753 3343333 2668888999
Q ss_pred CCcEEec
Q 025169 157 KIPVEIC 163 (257)
Q Consensus 157 ~i~v~~c 163 (257)
|++++..
T Consensus 89 ~iPvV~~ 95 (293)
T 3l6u_A 89 GIPVFAI 95 (293)
T ss_dssp TCCEEEE
T ss_pred CCCEEEe
Confidence 9998764
No 228
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=38.40 E-value=89 Score=25.19 Aligned_cols=80 Identities=13% Similarity=0.063 Sum_probs=46.9
Q ss_pred ceEEEeccC-----CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhh----HHHHHhcCCcEE-eecccccHHHHHH
Q 025169 83 GVVGIDLSG-----NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEE----IQSMLDFLPQRI-GHACCFEEEEWRK 152 (257)
Q Consensus 83 ~vvg~~l~g-----~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~----i~~~l~lg~~ri-~Hg~~l~~~~~~~ 152 (257)
..+|+-+.. ....+-...+..+-+.|+++|..+.+...... .+. +......+++-+ ..+...+++.++.
T Consensus 9 ~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~ 87 (292)
T 3k4h_A 9 KTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETE-EEIFNGVVKMVQGRQIGGIILLYSRENDRIIQY 87 (292)
T ss_dssp CEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCCSH-HHHHHHHHHHHHTTCCCEEEESCCBTTCHHHHH
T ss_pred CEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCCCC-HHHHHHHHHHHHcCCCCEEEEeCCCCChHHHHH
Confidence 467765543 12122235556667778999998888654431 221 122223466653 3444445677888
Q ss_pred HhcCCCcEEec
Q 025169 153 LKSSKIPVEIC 163 (257)
Q Consensus 153 l~~~~i~v~~c 163 (257)
+.+.|++++..
T Consensus 88 l~~~~iPvV~~ 98 (292)
T 3k4h_A 88 LHEQNFPFVLI 98 (292)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHCCCCEEEE
Confidence 99999998764
No 229
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=38.40 E-value=83 Score=26.63 Aligned_cols=29 Identities=10% Similarity=0.095 Sum_probs=16.5
Q ss_pred CCChhcHHHHHHHHHHc----CCceeeecCCCC
Q 025169 95 KGEWTTFLPALKFAREQ----GLQITLHCGEIP 123 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~----gl~v~~Ha~E~~ 123 (257)
..+.++-+++++.+.+. .+||.+|+|...
T Consensus 56 ~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~ 88 (301)
T 3m5v_A 56 TLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNA 88 (301)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCC
Confidence 34556666666555442 367777776543
No 230
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=38.01 E-value=1.5e+02 Score=25.06 Aligned_cols=74 Identities=14% Similarity=0.085 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .+||.+++|.....+.+ +.+-++|++-
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gada 114 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADG 114 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCE
Confidence 44445555555444322333333333433455666666666665542 47788887754433332 2333456654
No 231
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=37.72 E-value=89 Score=27.46 Aligned_cols=21 Identities=14% Similarity=0.048 Sum_probs=10.4
Q ss_pred EEeeCCC--CHHHHHHHHHHHHh
Q 025169 58 LSIDRRE--TTEAAMETVKLALE 78 (257)
Q Consensus 58 ~~~~r~~--~~e~~~~~~~~~~~ 78 (257)
+..+... +++++.+..+...+
T Consensus 198 vDan~~~~~~~~~a~~~~~~l~~ 220 (401)
T 2hzg_A 198 VDVGQIFGEDVEAAAARLPTLDA 220 (401)
T ss_dssp EECTTTTTTCHHHHHTTHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHh
Confidence 3444445 55555555544443
No 232
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=37.50 E-value=98 Score=26.31 Aligned_cols=42 Identities=12% Similarity=-0.102 Sum_probs=19.7
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC---CCHHHHHHHHHHHHhh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR---ETTEAAMETVKLALEM 79 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~---~~~e~~~~~~~~~~~~ 79 (257)
+.++..++-.-+.|+...++.+..-. .+.++=.+.++.+.+.
T Consensus 29 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 29 ASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEH 73 (309)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHH
Confidence 34444444333456665555444432 3455545555554443
No 233
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.41 E-value=1.1e+02 Score=25.74 Aligned_cols=27 Identities=4% Similarity=-0.022 Sum_probs=12.9
Q ss_pred CChhcHHHHHHHHHHc---CCceeeecCCC
Q 025169 96 GEWTTFLPALKFAREQ---GLQITLHCGEI 122 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~---gl~v~~Ha~E~ 122 (257)
.+.++-+++++.+.+. .+||.+|+|..
T Consensus 57 Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 86 (297)
T 3flu_A 57 LSVEEHTAVIEAVVKHVAKRVPVIAGTGAN 86 (297)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 3445555554444331 35555555543
No 234
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=37.33 E-value=1e+02 Score=26.52 Aligned_cols=94 Identities=7% Similarity=0.011 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcEEecccccceeccccCCCccc
Q 025169 101 FLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHH 180 (257)
Q Consensus 101 ~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~p 180 (257)
++++++..++.|.++..|+..+ ..-+....+.|++.++--...+.+.++.. ..++.+-=+....+..+..... ..-
T Consensus 233 ~~~i~~~i~~~g~~~i~~~~G~--~~~l~~l~~~g~d~~~~d~~~d~~~~~~~-g~~~~l~Gnldp~~l~~t~e~I-~~~ 308 (359)
T 2inf_A 233 MNRIFSELAKENVPLIMFGVGA--SHLAGDWHDLPLDVVGLDWRLGIDEARSK-GITKTVQGNLDPSILLAPWEVI-EQK 308 (359)
T ss_dssp HHHHHHHHGGGCSCEEEECTTC--GGGHHHHHTSSCSEEECCTTSCHHHHHHT-TCCSEEECCBCGGGGGSCHHHH-HHH
T ss_pred HHHHHHHHHHcCCcEEEEcCCc--HHHHHHHHHhCCCEEEeCCCCCHHHHHHc-CCCEEEEecCChHHhcCCHHHH-HHH
Confidence 4456777777799999997643 22344455688887754333344444444 3334442222222222221111 123
Q ss_pred HHHHHhcCC---CEEecCCCC
Q 025169 181 FVDLYKAQH---PLVLCTDDS 198 (257)
Q Consensus 181 i~~l~~~Gv---~v~lgTD~~ 198 (257)
++++++.|- ...+|+|..
T Consensus 309 v~~~l~~~~~~~g~Il~~gcg 329 (359)
T 2inf_A 309 TKEILDQGMESDGFIFNLGHG 329 (359)
T ss_dssp HHHHHHHHTTSSCEEBCBSSC
T ss_pred HHHHHHhCCCCCCeEEeCCCC
Confidence 666665443 678888864
No 235
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=37.31 E-value=1e+02 Score=24.54 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=45.8
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEE-eecccccHHHHH-HHhcCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRI-GHACCFEEEEWR-KLKSSK 157 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri-~Hg~~l~~~~~~-~l~~~~ 157 (257)
..+|+-+......+....+..+-+.|+++|..+.+......... .+...+..+++-| ..+ .+++.++ .+.+.|
T Consensus 9 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~--~~~~~~~~~l~~~~ 86 (277)
T 3e61_A 9 KLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA--FNENIIENTLTDHH 86 (277)
T ss_dssp -CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG--GGHHHHHHHHHHC-
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec--CChHHHHHHHHcCC
Confidence 35676553322112234556667778899999888765442221 1223334577753 333 4677788 999999
Q ss_pred CcEEec
Q 025169 158 IPVEIC 163 (257)
Q Consensus 158 i~v~~c 163 (257)
++++..
T Consensus 87 iPvV~~ 92 (277)
T 3e61_A 87 IPFVFI 92 (277)
T ss_dssp CCEEEG
T ss_pred CCEEEE
Confidence 998765
No 236
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=37.28 E-value=84 Score=25.43 Aligned_cols=81 Identities=14% Similarity=0.008 Sum_probs=48.2
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEE-eecccccHHHHHHHhcCCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRI-GHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~~~i 158 (257)
..+|+-+......+....+..+-+.|+++|..+.+......... .+...+..+++-| ..+...+++.++.+.+.|+
T Consensus 9 ~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~i 88 (291)
T 3egc_A 9 NVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEGEHDYLRTELPKTF 88 (291)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSSCCHHHHHSSCTTS
T ss_pred cEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCCChHHHHHhhccCC
Confidence 46776553322112234566677778999999888765442221 1223333567753 3344336678888999999
Q ss_pred cEEec
Q 025169 159 PVEIC 163 (257)
Q Consensus 159 ~v~~c 163 (257)
+++..
T Consensus 89 PvV~~ 93 (291)
T 3egc_A 89 PIVAV 93 (291)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98764
No 237
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=37.19 E-value=1.5e+02 Score=23.94 Aligned_cols=99 Identities=7% Similarity=0.057 Sum_probs=55.6
Q ss_pred ccceeeeeccC-ccccccCCCchhhhhhHhhcccCCCcEEEEEEEee---CCC--CH-------HHHHHHHHHHHhhCCC
Q 025169 16 AVSAVDVDFAS-RSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID---RRE--TT-------EAAMETVKLALEMRDL 82 (257)
Q Consensus 16 ~v~y~E~r~~p-~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~---r~~--~~-------e~~~~~~~~~~~~~~~ 82 (257)
.+.++|+...+ ... .+.-+++..+..++.|+++....... .-. ++ +...+.++.+.....+
T Consensus 30 G~~~vEl~~~~~~~~------~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~ 103 (290)
T 2qul_A 30 GFDLMEISLGEFHNL------SDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAP 103 (290)
T ss_dssp TCSEEEEESTTGGGS------CHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEecCCcccc------chhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 58899998763 221 12345556667788899887654322 111 22 3345566666666666
Q ss_pred ceEEEe--ccCC---CCC-CCh-------hcHHHHHHHHHHcCCceeeecC
Q 025169 83 GVVGID--LSGN---PTK-GEW-------TTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 83 ~vvg~~--l~g~---~~~-~~~-------~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
.+++.. ..|. ... ... +.++++.+.|+++|+.+.+|..
T Consensus 104 ~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 154 (290)
T 2qul_A 104 VFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVV 154 (290)
T ss_dssp EEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECC
T ss_pred EEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 555421 1132 011 111 3355667788899999999863
No 238
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=37.18 E-value=1e+02 Score=25.82 Aligned_cols=12 Identities=8% Similarity=0.091 Sum_probs=6.2
Q ss_pred ccccHHHHHHHh
Q 025169 143 CCFEEEEWRKLK 154 (257)
Q Consensus 143 ~~l~~~~~~~l~ 154 (257)
+.++++.+..|+
T Consensus 141 ~~l~~~~~~~La 152 (291)
T 3tak_A 141 VDLSNDTAVRLA 152 (291)
T ss_dssp CCCCHHHHHHHT
T ss_pred CCCCHHHHHHHH
Confidence 444555555554
No 239
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=36.99 E-value=46 Score=29.82 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=20.8
Q ss_pred HhcCCcEEeecccccHHHHHHHhc
Q 025169 132 LDFLPQRIGHACCFEEEEWRKLKS 155 (257)
Q Consensus 132 l~lg~~ri~Hg~~l~~~~~~~l~~ 155 (257)
.+.|+..||=|+-.+|+.|+.|++
T Consensus 289 ~~~Ga~iIGGCCGTtPeHI~aia~ 312 (406)
T 1lt8_A 289 YNLGVRYIGGCCGFEPYHIRAIAE 312 (406)
T ss_dssp HHHTEEEECCCTTCCHHHHHHHHH
T ss_pred HhCCCeEEEEecCCCHHHHHHHHH
Confidence 456999999999999999988875
No 240
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=36.41 E-value=1.7e+02 Score=23.74 Aligned_cols=80 Identities=9% Similarity=-0.017 Sum_probs=47.1
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhh---HHHHHhcCCcE-EeecccccHH-HHHHHhcCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEE---IQSMLDFLPQR-IGHACCFEEE-EWRKLKSSK 157 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~---i~~~l~lg~~r-i~Hg~~l~~~-~~~~l~~~~ 157 (257)
..+|+-+......+-...+..+-+.|+++|..+.+...+...... +...+..+++- |-.+...+++ .++.+.+ +
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~ 94 (303)
T 3kke_A 16 GTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-G 94 (303)
T ss_dssp -CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-T
T ss_pred CEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-C
Confidence 367765543222223355667778889999999887765433222 22333346665 3344444445 7888888 9
Q ss_pred CcEEec
Q 025169 158 IPVEIC 163 (257)
Q Consensus 158 i~v~~c 163 (257)
++++..
T Consensus 95 iPvV~i 100 (303)
T 3kke_A 95 VPAVTI 100 (303)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 998764
No 241
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=36.22 E-value=1.1e+02 Score=26.00 Aligned_cols=28 Identities=11% Similarity=0.020 Sum_probs=14.5
Q ss_pred CCChhcHHHHHHHHHHc---CCceeeecCCC
Q 025169 95 KGEWTTFLPALKFAREQ---GLQITLHCGEI 122 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~ 122 (257)
..+.++-+++++.+.+. .+||.+|+|..
T Consensus 64 ~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~ 94 (304)
T 3l21_A 64 TTTDGEKIELLRAVLEAVGDRARVIAGAGTY 94 (304)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 34555555555554432 35666666544
No 242
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=35.89 E-value=2e+02 Score=24.26 Aligned_cols=154 Identities=11% Similarity=0.060 Sum_probs=79.4
Q ss_pred CCCHHHHHHHHHHHHhh-CCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhc-CCc---
Q 025169 63 RETTEAAMETVKLALEM-RDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF-LPQ--- 137 (257)
Q Consensus 63 ~~~~e~~~~~~~~~~~~-~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~l-g~~--- 137 (257)
..+++...+.++...+. +-+.+ .+-+.+.+...++.+..++++.+++.|.--.+=++.. ....+.+++.. +..
T Consensus 122 ~~~~~~~~~~~e~SL~rL~~dyi-DL~~~H~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~-~~~~l~~~~~~~~i~~~~ 199 (314)
T 3b3d_A 122 DLGYEETLAAFETSLSKLGLDYL-DLYLIHWPVEGKYKEAWRALETLYKEGRIKAIGVSNF-QIHHLEDLMTAAEIKPMI 199 (314)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCE-EEEEESSCCTTTHHHHHHHHHHHHHTTSEEEEEEESC-CHHHHHHHTTTCSSCCSE
T ss_pred CCCHHHHHHHHHHHHHHhCCCcc-cccccccccccchhHHHHHHHHHHHCCCEeEEEecCC-chHHHHHHHHhcCCCeEE
Confidence 35677766666654433 22322 2222233333455555667777888887555444332 34555555543 211
Q ss_pred -EEe-ecccccHHHHHHHhcCCCcE-Eecccccceeccc-------cCCCccc----HHHHHhcCCCEEecCCCCCCCCC
Q 025169 138 -RIG-HACCFEEEEWRKLKSSKIPV-EICLTSNIRTETI-------SSLDIHH----FVDLYKAQHPLVLCTDDSGVFST 203 (257)
Q Consensus 138 -ri~-Hg~~l~~~~~~~l~~~~i~v-~~cP~SN~~l~~~-------~~~~~~p----i~~l~~~Gv~v~lgTD~~~~~~~ 203 (257)
.+. |-....++.++..+++||.+ ..+|...-.+..- ..++..| ++..+++|+-+-+||-++
T Consensus 200 nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~~~~~ia~~~g~t~aqvaL~w~l~~~~v~I~G~~~~----- 274 (314)
T 3b3d_A 200 NQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQTYNKSVAQIILRWDLQHGIITIPKSTKE----- 274 (314)
T ss_dssp EEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHHHTTCCHHHHHHHHHHHTTCEECCBCCCH-----
T ss_pred EEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCchhhHHHHHHcCCCHHHHHHHHHHhCCCEEEECCCCH-----
Confidence 121 22223567899999999887 5567654332210 0112222 566778886544444332
Q ss_pred ChHHHHHHHHH--hCCCCHHHHHHH
Q 025169 204 SVSREYDLAAS--AFSLGRREMFQL 226 (257)
Q Consensus 204 ~l~~E~~~a~~--~~~ls~~~v~~~ 226 (257)
+.+..... .+.||.+|+.++
T Consensus 275 ---~~l~eNl~a~~~~Ls~ee~~~l 296 (314)
T 3b3d_A 275 ---HRIKENASVFDFELTQDDMNRI 296 (314)
T ss_dssp ---HHHHHHHCCSSCCCCHHHHHHH
T ss_pred ---HHHHHHHHhcCCCCCHHHHHHH
Confidence 22322222 246788887766
No 243
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=35.73 E-value=1.9e+02 Score=23.99 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=49.4
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEE-eecccccHHHHHHHhcCCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRI-GHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~~~i 158 (257)
..+|+-+......+-...+..+-+.|+++|..+.+......... .+...+..+++-+ --+...++..++.+.+.++
T Consensus 63 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~i 142 (339)
T 3h5o_A 63 RTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAEPFERILSQHAL 142 (339)
T ss_dssp CEEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCTTHHHHHHHTTC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCHHHHHHHhcCCC
Confidence 36776554322233446677777888999999888765432221 1223333567653 3444445667888889999
Q ss_pred cEEec
Q 025169 159 PVEIC 163 (257)
Q Consensus 159 ~v~~c 163 (257)
+++..
T Consensus 143 PvV~~ 147 (339)
T 3h5o_A 143 PVVYM 147 (339)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98765
No 244
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=35.14 E-value=1.1e+02 Score=24.57 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=48.3
Q ss_pred HHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCcEEe---ecccccHHHHHHHhcCCCcEEecccccceeccccCC-Ccc
Q 025169 105 LKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRIG---HACCFEEEEWRKLKSSKIPVEICLTSNIRTETISSL-DIH 179 (257)
Q Consensus 105 ~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~ri~---Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~-~~~ 179 (257)
.+.|+++|+|+...-........+.+.++ +++|.+. -+-.++++.++....+-+. +-|+ -.|.| |.+
T Consensus 51 l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iN--iHpS------LLP~yrG~~ 122 (215)
T 3kcq_A 51 LLIAQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIIN--IHPS------LLPSFKGLN 122 (215)
T ss_dssp HHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEE--EESS------CTTTTCSSC
T ss_pred HHHHHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEE--ECcc------cccCCCCcc
Confidence 57899999998764322222344555553 7888653 2334588888887533222 2232 12222 578
Q ss_pred cHHHHHhcCCCEE
Q 025169 180 HFVDLYKAQHPLV 192 (257)
Q Consensus 180 pi~~l~~~Gv~v~ 192 (257)
|+.+.+.+|.+.+
T Consensus 123 pi~~Ai~~G~~~t 135 (215)
T 3kcq_A 123 AQEQAYKAGVKIA 135 (215)
T ss_dssp HHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCeE
Confidence 9999999988754
No 245
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=35.12 E-value=1.4e+02 Score=24.49 Aligned_cols=81 Identities=15% Similarity=0.086 Sum_probs=47.3
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEEe-eccc--ccHHHHHHHhcC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRIG-HACC--FEEEEWRKLKSS 156 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri~-Hg~~--l~~~~~~~l~~~ 156 (257)
..+|+-+......+-...+..+-+.|+++|..+.+...+..... .+...+..+++-|. .+.. .....++.+.+.
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~ 83 (330)
T 3uug_A 4 GSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQ 83 (330)
T ss_dssp CEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHT
T ss_pred cEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHC
Confidence 35666553322222234556667778999999888765443221 23344445777543 2222 234568889999
Q ss_pred CCcEEec
Q 025169 157 KIPVEIC 163 (257)
Q Consensus 157 ~i~v~~c 163 (257)
|++++..
T Consensus 84 giPvV~~ 90 (330)
T 3uug_A 84 GIKVIAY 90 (330)
T ss_dssp TCEEEEE
T ss_pred CCCEEEE
Confidence 9998764
No 246
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=34.96 E-value=1.8e+02 Score=23.59 Aligned_cols=103 Identities=8% Similarity=0.038 Sum_probs=55.4
Q ss_pred ccceeeeeccCc-cccc-cCCCchhhhhhHhhcccCCCcEEEEEEE-eeC-----CCCH-------HHHHHHHHHHHhhC
Q 025169 16 AVSAVDVDFASR-SIDV-RRPVNTKNMNDACNGTRGKKIYVRLLLS-IDR-----RETT-------EAAMETVKLALEMR 80 (257)
Q Consensus 16 ~v~y~E~r~~p~-~~~~-~~~~~~~~~~~~~~a~~~~gir~~li~~-~~r-----~~~~-------e~~~~~~~~~~~~~ 80 (257)
.+.++|+.+.+. .+.. ...+ ++-+++..+..++.|+++..+.. ..+ ..++ +...+.++.+....
T Consensus 43 G~~~iEl~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG 121 (295)
T 3cqj_A 43 GFDFVEMSVDETDERLSRLDWS-REQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVG 121 (295)
T ss_dssp TCSEEEEECCSSHHHHGGGGCC-HHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCcccccCcccCC-HHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 478999987632 1110 0111 23455566777888999765432 111 1122 22345556666666
Q ss_pred CCceEEEeccCCC-CC-CC-------hhcHHHHHHHHHHcCCceeeecCC
Q 025169 81 DLGVVGIDLSGNP-TK-GE-------WTTFLPALKFAREQGLQITLHCGE 121 (257)
Q Consensus 81 ~~~vvg~~l~g~~-~~-~~-------~~~~~~~~~~A~~~gl~v~~Ha~E 121 (257)
.+.++ +. .+.. .. .+ .+.++++.+.|++.|+.+.+|...
T Consensus 122 ~~~v~-~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~ 169 (295)
T 3cqj_A 122 IRVIQ-LA-GYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMD 169 (295)
T ss_dssp CCEEE-EC-CCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CCEEE-EC-CCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCC
Confidence 55333 22 1111 11 11 134667778889999999998754
No 247
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=34.87 E-value=51 Score=24.17 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=41.2
Q ss_pred CHhhHHHHHhcCCcE--Eeecc---c-ccHHHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCCEE
Q 025169 124 NKEEIQSMLDFLPQR--IGHAC---C-FEEEEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLV 192 (257)
Q Consensus 124 ~~~~i~~~l~lg~~r--i~Hg~---~-l~~~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~ 192 (257)
.++++...++.+++. ||-|. . ++++..+.|.++||.+++.+|.+.. --+..|...|=+|+
T Consensus 50 ~~~~l~~ll~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~~A~---------rtyN~L~~EgR~Va 115 (122)
T 2ab1_A 50 QPADVKEVVEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTEQAV---------KEYNALVAQGVRVG 115 (122)
T ss_dssp CHHHHHHHHTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHHHHH---------HHHHHHHHTTCCEE
T ss_pred CHHHHHHHhhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHHHHH---------HHHHHHHhCCCcEE
Confidence 456666667667764 56553 3 6899999999999999998886542 12455666665554
No 248
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=34.59 E-value=1.2e+02 Score=25.94 Aligned_cols=74 Identities=9% Similarity=0.151 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .+||.+++|.....+.+ +.+-++|++-
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gada 121 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADA 121 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCE
Confidence 34444555555444333334433444443445666666666665442 36777777755433322 2333456654
No 249
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=34.37 E-value=2.3e+02 Score=24.66 Aligned_cols=133 Identities=9% Similarity=0.063 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHhhccceeeeecc-CccccccCCCchhhhhh----Hhhcc------cCCCcEEEEEEEeeCCCCHHHHHH
Q 025169 3 KRSYMDAVVEGLRAVSAVDVDFA-SRSIDVRRPVNTKNMND----ACNGT------RGKKIYVRLLLSIDRRETTEAAME 71 (257)
Q Consensus 3 ~~~y~~~~~~~~~~v~y~E~r~~-p~~~~~~~~~~~~~~~~----~~~a~------~~~gir~~li~~~~r~~~~e~~~~ 71 (257)
.+.|++++...-.-+.|+|+=++ |+.--..-+..++.+.+ +.++. .+.++-+++.. ..+.++..+
T Consensus 163 ~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p----~~~~~~~~~ 238 (367)
T 3zwt_A 163 AEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAP----DLTSQDKED 238 (367)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECS----CCCHHHHHH
T ss_pred HHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCC----CCCHHHHHH
Confidence 46788776664333779999988 76531111222333333 33221 23445455432 234556666
Q ss_pred HHHHHHhhCCCceEEEecc-CCC----------CC-CCh-----hcHHHHHHHHHHc--CCceeeecCCCCCHhhHHHHH
Q 025169 72 TVKLALEMRDLGVVGIDLS-GNP----------TK-GEW-----TTFLPALKFAREQ--GLQITLHCGEIPNKEEIQSML 132 (257)
Q Consensus 72 ~~~~~~~~~~~~vvg~~l~-g~~----------~~-~~~-----~~~~~~~~~A~~~--gl~v~~Ha~E~~~~~~i~~~l 132 (257)
..+.+.+..-++++-..-. +.+ .. .+. ..+..+.+..+.. .++|.. .|-....+++.+.+
T Consensus 239 ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~-~GGI~s~~da~~~l 317 (367)
T 3zwt_A 239 IASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG-VGGVSSGQDALEKI 317 (367)
T ss_dssp HHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE-ESSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE-ECCCCCHHHHHHHH
Confidence 7776666655544422111 110 00 111 1123344444444 566655 34444566777777
Q ss_pred hcCCcEEe
Q 025169 133 DFLPQRIG 140 (257)
Q Consensus 133 ~lg~~ri~ 140 (257)
..|++.+.
T Consensus 318 ~~GAd~V~ 325 (367)
T 3zwt_A 318 RAGASLVQ 325 (367)
T ss_dssp HHTCSEEE
T ss_pred HcCCCEEE
Confidence 78887654
No 250
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=34.30 E-value=1.1e+02 Score=25.62 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=18.9
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC---CCHHHHHHHHHHHHh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR---ETTEAAMETVKLALE 78 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~---~~~e~~~~~~~~~~~ 78 (257)
+.+++.++-.-+.|+...++.+..-. .+.++-.+.++.+.+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~ 64 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVK 64 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 34444444444456665555443331 344554455554443
No 251
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=34.19 E-value=1.2e+02 Score=21.46 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=43.7
Q ss_pred EEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCC-CChhcHHHHHHHHHHcCCceeeecCCCCC
Q 025169 55 RLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTK-GEWTTFLPALKFAREQGLQITLHCGEIPN 124 (257)
Q Consensus 55 ~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~-~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~ 124 (257)
++.++..|....++....++..-.+..--+--+|=-+++.. .|..+++++++.|++.|=.+++|+.++.+
T Consensus 27 rF~Vs~~~~~tweel~~mvk~~f~L~~~~IkY~DEenD~V~i~Sq~E~eEAlkva~k~~n~L~m~V~~~~~ 97 (101)
T 1wj6_A 27 SFLVSDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEALKMAVKQGNQLQMQVHEGSG 97 (101)
T ss_dssp EEEESCTTTSCHHHHHHHHHHHHCCSSBCCEEECTTSCEECCCSHHHHHHHHHHHHHHTSEEEEECCBCCC
T ss_pred EEEecCCCCCCHHHHHHHHHHHcCCCceEEEEecCCCCEEEEecHHHHHHHHHHhccCCCEEEEEEeeccc
Confidence 44455566666777766666433322111333443444443 36789999999999988778888877643
No 252
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=34.08 E-value=2e+02 Score=23.69 Aligned_cols=170 Identities=13% Similarity=0.085 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhhccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCc
Q 025169 4 RSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLG 83 (257)
Q Consensus 4 ~~y~~~~~~~~~~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~ 83 (257)
+.+++++.++ ...-+|+=. |+. ...|.+....++. .++ ++..++....-..+++++.+..+.+.+....+
T Consensus 26 ~~~~~~l~~~--Gad~ielg~-pr~-~~~g~~~~~~~~~----l~~--~~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~ 95 (264)
T 1xm3_A 26 DIQKEAVAVS--ESDILTFAV-RRM-NIFEASQPNFLEQ----LDL--SKYTLLPNTAGASTAEEAVRIARLAKASGLCD 95 (264)
T ss_dssp HHHHHHHHHH--TCSEEEEET-TSS-TTC-------CTT----CCG--GGSEEEEECTTCSSHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHc--CCeEEEEcc-ccc-ccCCCCHHHHHHH----HHh--cCCeEcCCccccCCHHHHHHHHHHHHHcCCCC
Confidence 4455555544 455567554 433 2224555555542 222 33444444443356777666666666554455
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhHHHHHhcCCcEEee-----ccc---ccHHHHHH
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQSMLDFLPQRIGH-----ACC---FEEEEWRK 152 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~H-----g~~---l~~~~~~~ 152 (257)
++.+++.++... ..++.....+.++++ |+.+..=. ....+.++.+.+.|++-+.+ |.. .+++.++.
T Consensus 96 ~i~l~i~~d~~~-~~~e~~~~~~~a~~~~~~g~~vi~~~--~~~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~ 172 (264)
T 1xm3_A 96 MIKVEVIGCSRS-LLPDPVETLKASEQLLEEGFIVLPYT--SDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSF 172 (264)
T ss_dssp SEEECCBCCTTT-CCBCHHHHHHHHHHHHHTTCCEEEEE--CSCHHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHH
T ss_pred eEEEeecCCCcc-cccchHHHHHHHHHHHCCCeEEEEEc--CCCHHHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHH
Confidence 677776654321 235567778888887 87765322 12344556666677776544 211 14567777
Q ss_pred HhcC-CCcEEecccccceeccccCCCcccHHHHHhcCCC-EEecC
Q 025169 153 LKSS-KIPVEICLTSNIRTETISSLDIHHFVDLYKAQHP-LVLCT 195 (257)
Q Consensus 153 l~~~-~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~-v~lgT 195 (257)
+++. ++++.. .+.+.+ ...+.++++.|.. |.+||
T Consensus 173 i~~~~~iPviv-------~gGI~t--~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 173 IIEQAKVPVIV-------DAGIGS--PKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp HHHHCSSCBEE-------ESCCCS--HHHHHHHHHTTCSEEEESH
T ss_pred HHhcCCCCEEE-------EeCCCC--HHHHHHHHHcCCCEEEEcH
Confidence 7652 233221 111110 1247888888875 56676
No 253
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=33.90 E-value=1.8e+02 Score=23.20 Aligned_cols=80 Identities=19% Similarity=0.203 Sum_probs=45.8
Q ss_pred ceEEEeccC--CCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh----hHHHHHhcCCcE-EeecccccHHHHHHHhc
Q 025169 83 GVVGIDLSG--NPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE----EIQSMLDFLPQR-IGHACCFEEEEWRKLKS 155 (257)
Q Consensus 83 ~vvg~~l~g--~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~----~i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~ 155 (257)
..+|+-+.. ....+....+..+-+.++++|..+.+...+. +++ .+...+..+++- |..+...++..++.+.+
T Consensus 20 ~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~~ 98 (296)
T 3brq_A 20 QTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKH-SAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIID 98 (296)
T ss_dssp CEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEECCTT-SHHHHHHHHHHHHHTTCSEEEEECSSSCHHHHHHHHH
T ss_pred ceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEEEeCCC-CHHHHHHHHHHHHhcCCCEEEEecCCCChHHHHHHHh
Confidence 356665432 2222223455666677888999887765443 222 123333456775 44455456677888888
Q ss_pred -CCCcEEec
Q 025169 156 -SKIPVEIC 163 (257)
Q Consensus 156 -~~i~v~~c 163 (257)
.|++++..
T Consensus 99 ~~~iPvV~~ 107 (296)
T 3brq_A 99 AHSQPIMVL 107 (296)
T ss_dssp TCSSCEEEE
T ss_pred cCCCCEEEE
Confidence 89998654
No 254
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=33.81 E-value=2.6e+02 Score=25.00 Aligned_cols=129 Identities=10% Similarity=0.135 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHhhccce-----eeeeccC----------ccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCH
Q 025169 2 SKRSYMDAVVEGLRAVSA-----VDVDFAS----------RSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETT 66 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~v~y-----~E~r~~p----------~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~ 66 (257)
+-++.++.++++++...| +.|+.+. +...++++|.+++++-..+..++++ +..+-...++
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~-----i~~IEdPl~~ 290 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYP-----VISIEDGLSE 290 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSC-----EEEEECCSCT
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcc-----cceEeCCCCc
Q ss_pred HHHHHHHHHHHhhCCCceEEEeccCCC-CCCChhcHHH-------------------------HHHHHHHcCCc-eeee-
Q 025169 67 EAAMETVKLALEMRDLGVVGIDLSGNP-TKGEWTTFLP-------------------------ALKFAREQGLQ-ITLH- 118 (257)
Q Consensus 67 e~~~~~~~~~~~~~~~~vvg~~l~g~~-~~~~~~~~~~-------------------------~~~~A~~~gl~-v~~H- 118 (257)
+......++..+...+ +.+.|++ ...++..+++ +.+.|+++|++ +..|
T Consensus 291 dD~eg~~~L~~~~~~p----I~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H~ 366 (428)
T 3tqp_A 291 NDWAGWKLLTERLENK----VQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHR 366 (428)
T ss_dssp TCHHHHHHHHHHHTTT----SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccHHHHHHHHHhcCCC----cceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeCC
Q ss_pred cCCCCCHhhHHHHHhcCCcEE
Q 025169 119 CGEIPNKEEIQSMLDFLPQRI 139 (257)
Q Consensus 119 a~E~~~~~~i~~~l~lg~~ri 139 (257)
.+|+...--..-++.+++..|
T Consensus 367 sGEted~~iadLaVa~~~~~i 387 (428)
T 3tqp_A 367 SGETEDTTIADLAVATDARQI 387 (428)
T ss_dssp SBCCSCCHHHHHHHHTTCEEE
T ss_pred CCCchHHHHHHHHHHcCCCcc
No 255
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=33.79 E-value=1.2e+02 Score=24.37 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=47.4
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEEe-eccc--ccHHHHHHHhcC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRIG-HACC--FEEEEWRKLKSS 156 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri~-Hg~~--l~~~~~~~l~~~ 156 (257)
..+|+-+......+....+..+-+.|+++|..+.+......... .+...+..+++-|. .+.. ..++.++.+.+.
T Consensus 6 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ 85 (291)
T 3l49_A 6 KTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDA 85 (291)
T ss_dssp CEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHT
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHC
Confidence 35676544321111224566677778999999888765442221 22344445777643 3332 235668888899
Q ss_pred CCcEEec
Q 025169 157 KIPVEIC 163 (257)
Q Consensus 157 ~i~v~~c 163 (257)
|++++..
T Consensus 86 ~iPvV~~ 92 (291)
T 3l49_A 86 GIPLFTV 92 (291)
T ss_dssp TCCEEEE
T ss_pred CCcEEEe
Confidence 9998764
No 256
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=33.77 E-value=2.4e+02 Score=26.23 Aligned_cols=62 Identities=10% Similarity=0.124 Sum_probs=43.9
Q ss_pred hcHHH---HHHHHHH------cCCceeeecCCCCCHhhHHHHHhcCCcEEe--ecccccHHHHHHHhcC-CCcEEec
Q 025169 99 TTFLP---ALKFARE------QGLQITLHCGEIPNKEEIQSMLDFLPQRIG--HACCFEEEEWRKLKSS-KIPVEIC 163 (257)
Q Consensus 99 ~~~~~---~~~~A~~------~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~--Hg~~l~~~~~~~l~~~-~i~v~~c 163 (257)
+++.+ +++..++ .++++.+-. ..++-++.+++.|++.|- -|-..+++-++.+++. |+++++.
T Consensus 289 EEl~RvvpvI~~i~~~~~~~~~~vpISIDT---~~a~VaeaAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 289 EEIRRSIPLIKAIRESTELPQDKVILSIDT---YRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILS 362 (545)
T ss_dssp HHHHHHHHHHHHHHHCSSSCGGGEEEEEEC---CCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEE
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeEEEeC---CcHHHHHHHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEE
Confidence 45544 4555554 377777754 456667888999998875 3443478889999999 9998876
No 257
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=33.42 E-value=1.4e+02 Score=25.18 Aligned_cols=27 Identities=4% Similarity=-0.084 Sum_probs=12.6
Q ss_pred CChhcHHHHHHHHHHc---CCceeeecCCC
Q 025169 96 GEWTTFLPALKFAREQ---GLQITLHCGEI 122 (257)
Q Consensus 96 ~~~~~~~~~~~~A~~~---gl~v~~Ha~E~ 122 (257)
.+.++-+++++.+.+. .+||.+++|..
T Consensus 62 Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 91 (301)
T 1xky_A 62 LTSEEKVALYRHVVSVVDKRVPVIAGTGSN 91 (301)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 3444544444444331 35555555543
No 258
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=33.41 E-value=42 Score=28.27 Aligned_cols=55 Identities=15% Similarity=-0.039 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCC
Q 025169 66 TEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEI 122 (257)
Q Consensus 66 ~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~ 122 (257)
.+...+.++...+. -++++-.+..|.-...+.++-+++++.+.+ .+|+.+++|..
T Consensus 18 ~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaGvg~~ 72 (283)
T 2pcq_A 18 EEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLVGLMEE 72 (283)
T ss_dssp HHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEEECCS
T ss_pred HHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEEeCCCC
Confidence 34444455544443 334443333343334466666666666665 66666666644
No 259
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=33.15 E-value=1.9e+02 Score=23.27 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=19.2
Q ss_pred HhhHHHHHhcCCcEEeecccccHHHHHHHhcCCCcE
Q 025169 125 KEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPV 160 (257)
Q Consensus 125 ~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i~v 160 (257)
.+.+..+++.|++-+ |.-..+++.++..++.|+.+
T Consensus 88 ~d~~~~A~~aGAd~v-~~p~~d~~v~~~~~~~g~~~ 122 (225)
T 1mxs_A 88 RSMFAAVEAAGAQFV-VTPGITEDILEAGVDSEIPL 122 (225)
T ss_dssp HHHHHHHHHHTCSSE-ECSSCCHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHCCCCEE-EeCCCCHHHHHHHHHhCCCE
Confidence 345556666666554 43345555556666666543
No 260
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=33.03 E-value=1.9e+02 Score=23.33 Aligned_cols=134 Identities=10% Similarity=-0.007 Sum_probs=67.9
Q ss_pred ccceeeeeccCccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCH-------HHHHHHHHHHHhhCCCceEEEe
Q 025169 16 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETT-------EAAMETVKLALEMRDLGVVGID 88 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~-------e~~~~~~~~~~~~~~~~vvg~~ 88 (257)
.+.++|+.. +. + -++...+..++.|+++..+ .+....++ +...+.++.+.....+.++...
T Consensus 44 G~~~vEl~~-~~---------~-~~~~~~~~l~~~gl~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~ 111 (301)
T 3cny_A 44 GFQGTEVGG-FF---------P-GPEKLNYELKLRNLEIAGQ-WFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSE 111 (301)
T ss_dssp TCCEECCCT-TC---------C-CHHHHHHHHHHTTCEECEE-EEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEecC-CC---------C-CHHHHHHHHHHCCCeEEEE-eccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 578899872 21 1 2344556677889887665 22221122 2334555666666555433321
Q ss_pred ----ccCCC-C------CC-Ch-------hcHHHHHHHHHHcCCceeeecCCCC---CHhhHHHHHh-cCCcE------E
Q 025169 89 ----LSGNP-T------KG-EW-------TTFLPALKFAREQGLQITLHCGEIP---NKEEIQSMLD-FLPQR------I 139 (257)
Q Consensus 89 ----l~g~~-~------~~-~~-------~~~~~~~~~A~~~gl~v~~Ha~E~~---~~~~i~~~l~-lg~~r------i 139 (257)
..|.. . .. +. +.++++.+.|+++|+.+.+|..... .+..+...++ .+... +
T Consensus 112 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~~D~ 191 (301)
T 3cny_A 112 QTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETDRLMANTDPKLVGLLYDT 191 (301)
T ss_dssp CTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHHHHHHTSCTTTCEEEEEH
T ss_pred CCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHHHHHHHhCCccceeEEech
Confidence 10211 0 11 11 3456777888999999999875431 2344444444 34321 3
Q ss_pred eecccc--c-HHHHHHHhcCCCcEEe
Q 025169 140 GHACCF--E-EEEWRKLKSSKIPVEI 162 (257)
Q Consensus 140 ~Hg~~l--~-~~~~~~l~~~~i~v~~ 162 (257)
+|.... + .+.++.+.. .|..+|
T Consensus 192 ~h~~~~g~d~~~~l~~~~~-~i~~vH 216 (301)
T 3cny_A 192 GHIAVSDGDYMALLNAHID-RVVHVH 216 (301)
T ss_dssp HHHHHHHSCSHHHHHHHGG-GEEEEE
T ss_pred HHHHHcCCCHHHHHHHHHh-heeEEE
Confidence 565443 2 344555543 244444
No 261
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.88 E-value=1.1e+02 Score=26.10 Aligned_cols=43 Identities=7% Similarity=-0.124 Sum_probs=20.7
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC---CCHHHHHHHHHHHHhhC
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR---ETTEAAMETVKLALEMR 80 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~---~~~e~~~~~~~~~~~~~ 80 (257)
+.+++.++-.-+.|+...++.+..-. .+.++=.+.++.+.+..
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~ 74 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA 74 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc
Confidence 34444444444456666555444432 34555555555554443
No 262
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=32.78 E-value=1.2e+02 Score=25.38 Aligned_cols=17 Identities=12% Similarity=0.155 Sum_probs=11.6
Q ss_pred CChHHHHHHHHHHHHHH
Q 025169 236 ANGRVKEDLKEIFDLAE 252 (257)
Q Consensus 236 ~~~~~k~~l~~~~~~~~ 252 (257)
+++++++++.+.+.+..
T Consensus 273 l~~~~~~~l~~~l~~~~ 289 (294)
T 3b4u_A 273 ISPEDRRQIEGAFDALF 289 (294)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 46677777777776654
No 263
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=32.72 E-value=2.2e+02 Score=23.90 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCC--ceeeecCCCCCHhhHHHHHhcCCcEEee
Q 025169 64 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGL--QITLHCGEIPNKEEIQSMLDFLPQRIGH 141 (257)
Q Consensus 64 ~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl--~v~~Ha~E~~~~~~i~~~l~lg~~ri~H 141 (257)
.+.++..+.++.+.... +..+.+.|.|+...+ .+.++++.+++.+. .+++...-+.-.+.+....+.|.+++.-
T Consensus 50 ls~e~i~~~i~~~~~~g---~~~i~~tGGEPll~~-~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~i 125 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELG---VKKIRITGGEPLMRR-DLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINV 125 (340)
T ss_dssp CCHHHHHHHHHHHHHTT---CCEEEEESSCGGGST-THHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHHHHCC---CCEEEEeCCCccchh-hHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEE
Confidence 46677777777655432 223444454443333 46788888887754 4555432111112223333457777655
Q ss_pred cccc-cHHHHHHHh
Q 025169 142 ACCF-EEEEWRKLK 154 (257)
Q Consensus 142 g~~l-~~~~~~~l~ 154 (257)
.+.- +++..+.+.
T Consensus 126 Sld~~~~~~~~~i~ 139 (340)
T 1tv8_A 126 SLDAIDDTLFQSIN 139 (340)
T ss_dssp ECCCSSHHHHHHHH
T ss_pred ecCCCCHHHHHHhh
Confidence 5432 444444443
No 264
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=32.29 E-value=1.2e+02 Score=25.37 Aligned_cols=14 Identities=21% Similarity=0.143 Sum_probs=8.4
Q ss_pred cccccHHHHHHHhc
Q 025169 142 ACCFEEEEWRKLKS 155 (257)
Q Consensus 142 g~~l~~~~~~~l~~ 155 (257)
|+.++++.+..|++
T Consensus 141 g~~l~~~~~~~La~ 154 (292)
T 3daq_A 141 NMTIEPETVEILSQ 154 (292)
T ss_dssp SCCCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHhc
Confidence 45556666666664
No 265
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=32.23 E-value=82 Score=28.58 Aligned_cols=104 Identities=11% Similarity=0.006 Sum_probs=61.5
Q ss_pred ChHHHHHHHHHHhhc-cceeeeeccCccccccCC---C---chh----hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHH
Q 025169 2 SKRSYMDAVVEGLRA-VSAVDVDFASRSIDVRRP---V---NTK----NMNDACNGTRGKKIYVRLLLSIDRRETTEAAM 70 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~-v~y~E~r~~p~~~~~~~~---~---~~~----~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~ 70 (257)
+.++|.+++-+.... +-. .-+.+++ . ..+ +++++-++.+++|=+......+.. ++++..
T Consensus 169 s~~~~a~~~ye~~~GGlDf--------iKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa--~~~eM~ 238 (444)
T 3kdn_A 169 SPEEFEKLAYDLLSNGADY--------MKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITA--DLLEME 238 (444)
T ss_dssp CHHHHHHHHHHHHHTTCCE--------EECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCS--SHHHHH
T ss_pred CHHHHHHHHHHHHhcCCce--------eecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecCC--CHHHHH
Confidence 567888888887772 211 1111111 1 123 344455778888866555555554 478888
Q ss_pred HHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 71 ETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 71 ~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+..+.+.+.... .+=+++. ..-...++.+.+.+++.|+++|.|-+
T Consensus 239 ~Ra~~a~e~G~~-~~mvd~~----~~G~~a~~~l~~~~~~~~l~lh~HrA 283 (444)
T 3kdn_A 239 QRLEVLADLGLK-HAMVDVV----ITGWGALRYIRDLAADYGLAIHGHRA 283 (444)
T ss_dssp HHHHHHHHHTCC-EEEEEHH----HHCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHcCCC-EEEEccc----cccHHHHHHHHHhccccCeEEEEccC
Confidence 888888877554 3333421 11123456666667788999999954
No 266
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=32.14 E-value=86 Score=28.10 Aligned_cols=76 Identities=9% Similarity=0.039 Sum_probs=42.2
Q ss_pred hcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 45 NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 45 ~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+++.-.|++.+.+.+-.+..+++..++.++...+.....+.-+...+...++..+.++++.+.|+++|+.+++-++
T Consensus 197 ~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A 272 (475)
T 3k40_A 197 RAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAA 272 (475)
T ss_dssp HHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHH
Confidence 3334457777666432112467776666654332211111111123433345667899999999999988776654
No 267
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=31.96 E-value=2e+02 Score=23.22 Aligned_cols=39 Identities=23% Similarity=0.197 Sum_probs=21.8
Q ss_pred cCCCCCHhhHHHHHhcCCcEEeecccccHHHHHHHhcCCC
Q 025169 119 CGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 119 a~E~~~~~~i~~~l~lg~~ri~Hg~~l~~~~~~~l~~~~i 158 (257)
+|--...+.++.+++.|++-|.- -.++++.++..+++|+
T Consensus 69 AGTVlt~~~a~~ai~AGA~fivs-P~~~~evi~~~~~~~v 107 (217)
T 3lab_A 69 AGTVCTADDFQKAIDAGAQFIVS-PGLTPELIEKAKQVKL 107 (217)
T ss_dssp EECCCSHHHHHHHHHHTCSEEEE-SSCCHHHHHHHHHHHH
T ss_pred eccccCHHHHHHHHHcCCCEEEe-CCCcHHHHHHHHHcCC
Confidence 34333455666666667765531 1246666766666665
No 268
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=31.89 E-value=1.3e+02 Score=25.33 Aligned_cols=28 Identities=14% Similarity=0.240 Sum_probs=14.1
Q ss_pred CCChhcHHHHHHHHHHc---CCceeeecCCC
Q 025169 95 KGEWTTFLPALKFAREQ---GLQITLHCGEI 122 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~ 122 (257)
..+.++-+++++.+.+. .+||.+++|..
T Consensus 60 ~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 90 (303)
T 2wkj_A 60 VQSLSEREQVLEIVAEEAKGKIKLIAHVGCV 90 (303)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 34555555555544331 35666666543
No 269
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=31.89 E-value=1.2e+02 Score=25.35 Aligned_cols=13 Identities=23% Similarity=0.217 Sum_probs=8.3
Q ss_pred cccccHHHHHHHh
Q 025169 142 ACCFEEEEWRKLK 154 (257)
Q Consensus 142 g~~l~~~~~~~l~ 154 (257)
|+.++++.+..|+
T Consensus 139 g~~l~~~~~~~La 151 (289)
T 2yxg_A 139 AVNLEPKTVKLLA 151 (289)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CcCCCHHHHHHHH
Confidence 4556667666665
No 270
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=31.74 E-value=1.1e+02 Score=26.00 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .+||.+++|.....+.+ +.+-++|++-
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gada 120 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADA 120 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 34444555555443222233322333333345666666666665542 47788887755433322 2333456654
No 271
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=31.57 E-value=1.4e+02 Score=23.66 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=45.8
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEE-eeccc-ccHHHHHHHhcCCC
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRI-GHACC-FEEEEWRKLKSSKI 158 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri-~Hg~~-l~~~~~~~l~~~~i 158 (257)
.+|+-+......+....+..+-+.|+++|..+.+...+..... .+...+..+++-+ ..+.. .+++.++.+.+.|+
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~i 83 (272)
T 3o74_A 4 TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGL 83 (272)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTC
T ss_pred EEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCC
Confidence 5665443322112234556667778899999888765542221 1233334577753 23332 24567888899999
Q ss_pred cEEec
Q 025169 159 PVEIC 163 (257)
Q Consensus 159 ~v~~c 163 (257)
+++..
T Consensus 84 PvV~~ 88 (272)
T 3o74_A 84 PVIAI 88 (272)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98764
No 272
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=31.51 E-value=1.1e+02 Score=24.39 Aligned_cols=64 Identities=16% Similarity=0.192 Sum_probs=37.6
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhh----HHHHHhcCCcE-EeecccccHHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEE----IQSMLDFLPQR-IGHACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~----i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~~~i~v~~c 163 (257)
..+..+-+.++++|..+.+...+. +.+. +...+..+++- |..+...+++.++.+.+.+++++..
T Consensus 20 ~~~~gi~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~~~~iPvV~~ 88 (275)
T 3d8u_A 20 HFLPSFQQALNKAGYQLLLGYSDY-SIEQEEKLLSTFLESRPAGVVLFGSEHSQRTHQLLEASNTPVLEI 88 (275)
T ss_dssp HHHHHHHHHHHHTSCEECCEECTT-CHHHHHHHHHHHHTSCCCCEEEESSCCCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC-CHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHHhCCCCEEEE
Confidence 445556667788888877765433 2221 22333346664 3344444566778888888887654
No 273
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=31.36 E-value=2.7e+02 Score=24.54 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=19.6
Q ss_pred hhcHHHHHHHHHHcCCceee-ecC-CCC
Q 025169 98 WTTFLPALKFAREQGLQITL-HCG-EIP 123 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~-Ha~-E~~ 123 (257)
.....++.+.|+++|+++.+ |.. |+.
T Consensus 346 itea~~ia~lA~~~g~~~~~~h~~~es~ 373 (427)
T 2pa6_A 346 LSEAVDAAQLAFRNGYGVVVSHRSGETE 373 (427)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCSSCCS
T ss_pred HHHHHHHHHHHHHcCCeEEEeCCCCCCh
Confidence 34566778888999999888 865 774
No 274
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=31.07 E-value=1.6e+02 Score=27.10 Aligned_cols=104 Identities=20% Similarity=0.266 Sum_probs=61.5
Q ss_pred ChHHHHHHHHHHhhc-cceeeeeccCccccccCC-Cc-----hh----hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHH
Q 025169 2 SKRSYMDAVVEGLRA-VSAVDVDFASRSIDVRRP-VN-----TK----NMNDACNGTRGKKIYVRLLLSIDRRETTEAAM 70 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~-v~y~E~r~~p~~~~~~~~-~~-----~~----~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~ 70 (257)
+.+.|.+++-+.... +-. .-+.+++ |+ .+ +++++-++.+++|-+-...+.+.- .++++..
T Consensus 190 sp~~~a~~~ye~~~GGlDf--------iKDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa-~~~~eM~ 260 (493)
T 1bwv_A 190 SGKNYGRVVYEALKGGLDF--------VKDDENINSQPFMRWRERYLFTMEAVNKASAATGEVKGHYLNVTA-ATMEEMY 260 (493)
T ss_dssp CHHHHHHHHHHHHHHTCSE--------EECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHTSCCEEEEECCC-SSHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCc--------ccCccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeeccCCC-CCHHHHH
Confidence 567888888887662 211 1111111 11 22 344445777888866555555553 2478888
Q ss_pred HHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 71 ETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 71 ~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+..+.+.+.... .+-+++.. -..-+..+.+.+|+.|+++|.|-+
T Consensus 261 ~Ra~~a~e~G~~-~~mvd~~~-----G~~a~~~l~~~~r~~~l~lh~HRA 304 (493)
T 1bwv_A 261 ARANFAKELGSV-IIMIDLVI-----GYTAIQTMAKWARDNDMILHLHRA 304 (493)
T ss_dssp HHHHHHHHTTCS-EEEEEGGG-----CHHHHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHhCCC-eEEEeccc-----ChHHHHHHHHHHhhcCcEEEecCC
Confidence 888888776543 33344321 223466666778889999999964
No 275
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=30.73 E-value=2.3e+02 Score=24.17 Aligned_cols=146 Identities=15% Similarity=0.131 Sum_probs=76.8
Q ss_pred CCchhhhh---hHhhcccCCCcEEEEEEEeeCCC-CHHHHHHHHHHHHhhCCCceEEEeccCC--C---------CCCCh
Q 025169 34 PVNTKNMN---DACNGTRGKKIYVRLLLSIDRRE-TTEAAMETVKLALEMRDLGVVGIDLSGN--P---------TKGEW 98 (257)
Q Consensus 34 ~~~~~~~~---~~~~a~~~~gir~~li~~~~r~~-~~e~~~~~~~~~~~~~~~~vvg~~l~g~--~---------~~~~~ 98 (257)
++.++++. +++++.. . -++..+.-.+ +++.+.+.++...+ .|+.|+.+-+. + .-.|.
T Consensus 72 vt~~em~~~~~~I~r~~~-~----pviaD~d~Gyg~~~~v~~~v~~l~~---aGaagv~iED~~~~krcGh~~gk~l~~~ 143 (305)
T 3ih1_A 72 VTSTEVAERARDLVRATD-L----PVLVDIDTGFGGVLNVARTAVEMVE---AKVAAVQIEDQQLPKKCGHLNGKKLVTT 143 (305)
T ss_dssp SCHHHHHHHHHHHHHHHC-C----CEEEECTTCSSSHHHHHHHHHHHHH---TTCSEEEEECBCSSCCTTCTTCCCBCCH
T ss_pred CCHHHHHHHHHHHHHhcC-C----CEEEECCCCCCCHHHHHHHHHHHHH---hCCcEEEECCCCCCcccCCCCCCcccCH
Confidence 44555553 3445443 1 2444444332 46666666665554 34555555321 1 11355
Q ss_pred hcHHHHHHHHHHcCCceeeecCCC-CCHhhHHHHH-------hcCCcE-EeecccccHHHHHHHhcC-CCcEEecccccc
Q 025169 99 TTFLPALKFAREQGLQITLHCGEI-PNKEEIQSML-------DFLPQR-IGHACCFEEEEWRKLKSS-KIPVEICLTSNI 168 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~-~~~~~i~~~l-------~lg~~r-i~Hg~~l~~~~~~~l~~~-~i~v~~cP~SN~ 168 (257)
+++..-++.+++.|.++.+-+--. .....+.+++ +.|++- ..||+. ++++++.+.+. .+++..+++..-
T Consensus 144 ~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~-~~~~~~~i~~~~~~P~~~n~~~~g 222 (305)
T 3ih1_A 144 EELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEALQ-SEEEFRLFNSKVNAPLLANMTEFG 222 (305)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTCC-SHHHHHHHHHHSCSCBEEECCTTS
T ss_pred HHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCCC-CHHHHHHHHHHcCCCEEEeecCCC
Confidence 667766777777777666655311 1111122222 369986 467764 66777777643 555544443311
Q ss_pred eeccccCCCcccHHHHHhcCCCEEec
Q 025169 169 RTETISSLDIHHFVDLYKAQHPLVLC 194 (257)
Q Consensus 169 ~l~~~~~~~~~pi~~l~~~Gv~v~lg 194 (257)
. . ...+..+|.+.|+++.+-
T Consensus 223 ~---t---p~~~~~eL~~lGv~~v~~ 242 (305)
T 3ih1_A 223 K---T---PYYSAEEFANMGFQMVIY 242 (305)
T ss_dssp S---S---CCCCHHHHHHTTCSEEEE
T ss_pred C---C---CCCCHHHHHHcCCCEEEE
Confidence 1 1 124689999999987653
No 276
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=30.63 E-value=1.3e+02 Score=25.76 Aligned_cols=15 Identities=7% Similarity=0.330 Sum_probs=8.5
Q ss_pred CChHHHHHHHHHHHH
Q 025169 236 ANGRVKEDLKEIFDL 250 (257)
Q Consensus 236 ~~~~~k~~l~~~~~~ 250 (257)
+++++++++.+.+++
T Consensus 295 l~~~~~~~l~~~l~~ 309 (318)
T 3qfe_A 295 PSEAAKQEVRKVMAE 309 (318)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 345666666555543
No 277
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=30.40 E-value=1.6e+02 Score=25.50 Aligned_cols=74 Identities=11% Similarity=0.063 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .+||.+++|.....+.+ +.+-++|++-
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gada 129 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADG 129 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 44555666665554333344444444544455777777777766542 47888888865433333 2334467664
No 278
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=30.29 E-value=1.5e+02 Score=24.81 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=19.3
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeC---CCCHHHHHHHHHHHHh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDR---RETTEAAMETVKLALE 78 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r---~~~~e~~~~~~~~~~~ 78 (257)
+.+++.++-.-+.|+...++.+..- ..+.++-.+.++.+.+
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~ 65 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVID 65 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 3444444433344666655544432 1345554555554443
No 279
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=30.29 E-value=1.7e+02 Score=24.47 Aligned_cols=28 Identities=4% Similarity=0.004 Sum_probs=14.0
Q ss_pred CCChhcHHHHHHHHHHc---CCceeeecCCC
Q 025169 95 KGEWTTFLPALKFAREQ---GLQITLHCGEI 122 (257)
Q Consensus 95 ~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~ 122 (257)
..+.++-+++++.+.+. .+||.+++|..
T Consensus 50 ~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~ 80 (292)
T 2ojp_A 50 TLNHDEHADVVMMTLDLADGRIPVIAGTGAN 80 (292)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCc
Confidence 34555555555544331 35666666543
No 280
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=29.65 E-value=1.6e+02 Score=24.71 Aligned_cols=81 Identities=21% Similarity=0.192 Sum_probs=48.0
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcE-EeecccccHHHHHHHhcCCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQR-IGHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~~~i 158 (257)
..+|+-+......+-...+..+-+.|+++|..+.+......... .+...+..+++- |--+...+++.++.+.+.|+
T Consensus 71 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~~~i 150 (355)
T 3e3m_A 71 GFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTEQTIRLLQRASI 150 (355)
T ss_dssp CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCCHHHHHHHHHCCS
T ss_pred CEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHhCCC
Confidence 36776543211111234566677778999999888765432221 122333456764 33444456677888999999
Q ss_pred cEEec
Q 025169 159 PVEIC 163 (257)
Q Consensus 159 ~v~~c 163 (257)
+++..
T Consensus 151 PvV~i 155 (355)
T 3e3m_A 151 PIVEI 155 (355)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99865
No 281
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=29.48 E-value=1.8e+02 Score=24.93 Aligned_cols=91 Identities=20% Similarity=0.109 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhhCCC-ceEEEeccCCCCC--C-ChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 65 TTEAAMETVKLALEMRDL-GVVGIDLSGNPTK--G-EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~-~vvg~~l~g~~~~--~-~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
+|+++.+.++.. .-+ .-++++-++..+. . +.-.|..+-+..+..++|+.+|=|-+.+++.+...-++|.+. .
T Consensus 154 ~Peea~~Fv~~T---gvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~-~ 229 (305)
T 1rvg_A 154 NPEEARIFMERT---GADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEI-G 229 (305)
T ss_dssp CHHHHHHHHHHH---CCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCC-C
T ss_pred CHHHHHHHHHHH---CCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhcccc-c
Confidence 577776666532 222 1234443332333 2 223355555555667899999977555554444333466543 3
Q ss_pred ecccccHHHHHHHhcCCCc
Q 025169 141 HACCFEEEEWRKLKSSKIP 159 (257)
Q Consensus 141 Hg~~l~~~~~~~l~~~~i~ 159 (257)
-..-+++++++...+.||.
T Consensus 230 ~~~G~p~e~i~~ai~~GV~ 248 (305)
T 1rvg_A 230 EAAGIHPEDIKKAISLGIA 248 (305)
T ss_dssp SCBCCCHHHHHHHHHTTEE
T ss_pred cCCCCCHHHHHHHHHCCCe
Confidence 3334578888888888864
No 282
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=29.18 E-value=1.5e+02 Score=25.40 Aligned_cols=74 Identities=11% Similarity=-0.089 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .+||.+++|.....+.+ +.+-++|++-
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gada 132 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADA 132 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 44555566665554433344443444444455777777777766543 47888888765433332 2333456654
No 283
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.13 E-value=1.2e+02 Score=25.91 Aligned_cols=74 Identities=5% Similarity=0.046 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .+||.+++|.....+.+ +.+-++|++-
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gada 122 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEA 122 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 34444555554443222223322333333345666666666665442 47777777654333322 2333356654
No 284
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=29.12 E-value=1.4e+02 Score=25.30 Aligned_cols=12 Identities=8% Similarity=-0.014 Sum_probs=6.2
Q ss_pred ccccHHHHHHHh
Q 025169 143 CCFEEEEWRKLK 154 (257)
Q Consensus 143 ~~l~~~~~~~l~ 154 (257)
+.++++.+..|+
T Consensus 152 ~~l~~~~~~~La 163 (306)
T 1o5k_A 152 VNVLPETAARIA 163 (306)
T ss_dssp CCCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 344555555554
No 285
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=29.10 E-value=1.9e+02 Score=23.33 Aligned_cols=80 Identities=18% Similarity=0.101 Sum_probs=44.8
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh----hHHHHHhcCCcEE-eecccccHHHHHHHhcCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE----EIQSMLDFLPQRI-GHACCFEEEEWRKLKSSK 157 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~----~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~~~ 157 (257)
..+|+-+......+....+..+-+.|+++|..+.+...+. +.+ .+...+..+++-| ..+...+++.++.+.+.|
T Consensus 17 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~ 95 (289)
T 2fep_A 17 TTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQ-NMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSP 95 (289)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHSS
T ss_pred CeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCCC-CHHHHHHHHHHHHhCCCCEEEEecCCCCHHHHHHHHhcC
Confidence 3667655321111122445566677888998887765433 222 1223334577753 334334566788888889
Q ss_pred CcEEec
Q 025169 158 IPVEIC 163 (257)
Q Consensus 158 i~v~~c 163 (257)
++++..
T Consensus 96 iPvV~~ 101 (289)
T 2fep_A 96 VPIVLA 101 (289)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 988664
No 286
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=29.04 E-value=1.7e+02 Score=25.61 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHc---CCceeeecCCCCCHhhH---HHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~---gl~v~~Ha~E~~~~~~i---~~~l~lg~~r 138 (257)
+.+...+.++...+..-++++-.+..|.-...+.++-+++++.+.+. .++|.+++|.....+.+ +.+-+.|++-
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gada 157 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHA 157 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 44555566665544332333333333433455777777777666542 47888888865433333 2344467764
Q ss_pred E
Q 025169 139 I 139 (257)
Q Consensus 139 i 139 (257)
+
T Consensus 158 v 158 (360)
T 4dpp_A 158 A 158 (360)
T ss_dssp E
T ss_pred E
Confidence 3
No 287
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=28.99 E-value=2e+02 Score=24.58 Aligned_cols=101 Identities=10% Similarity=0.073 Sum_probs=58.0
Q ss_pred eEEEeccC-CCC--CCChhcHHHHHHHHHHc-CCceee-ecCCC-CCHhhHHHHHhcCCc--EEeecccc--cHHHHHHH
Q 025169 84 VVGIDLSG-NPT--KGEWTTFLPALKFAREQ-GLQITL-HCGEI-PNKEEIQSMLDFLPQ--RIGHACCF--EEEEWRKL 153 (257)
Q Consensus 84 vvg~~l~g-~~~--~~~~~~~~~~~~~A~~~-gl~v~~-Ha~E~-~~~~~i~~~l~lg~~--ri~Hg~~l--~~~~~~~l 153 (257)
++.++..+ .|. ..++++..++++..++. ++|+.+ -.+.. ..++-++.+++.|++ -|--.+.. .++.++..
T Consensus 90 iIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~~~~~~~~~a 169 (310)
T 2h9a_B 90 IVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKDNYKPIVATC 169 (310)
T ss_dssp EEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHH
T ss_pred EEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCCccHHHHHHH
Confidence 66665532 232 24666666676666554 999988 55311 123455677887775 23222222 46677888
Q ss_pred hcCCCcEEecccccceeccccCCCcccHHHHHhcCCC
Q 025169 154 KSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHP 190 (257)
Q Consensus 154 ~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~ 190 (257)
++.|.+++..+.-++. . -..-+..+.++||+
T Consensus 170 a~~g~~vv~m~~~dv~--~----l~~~~~~a~~~Gi~ 200 (310)
T 2h9a_B 170 MVHGHSVVASAPLDIN--L----SKQLNIMIMEMNLA 200 (310)
T ss_dssp HHHTCEEEEECSSCHH--H----HHHHHHHHHTTTCC
T ss_pred HHhCCCEEEEChhHHH--H----HHHHHHHHHHCCCC
Confidence 9999988765532221 1 11235677788984
No 288
>3bqs_A Uncharacterized protein; 10114F, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.42A {Listeria monocytogenes str} PDB: 3bqt_A 3mab_A
Probab=28.88 E-value=29 Score=24.35 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=27.3
Q ss_pred CCHHHHHHH--HHHHHHHcCCChHHHHHHHHHHHHHHhhc
Q 025169 218 LGRREMFQL--AKSAVKFIFANGRVKEDLKEIFDLAEKKL 255 (257)
Q Consensus 218 ls~~~v~~~--~~n~~~~~~~~~~~k~~l~~~~~~~~~~~ 255 (257)
.+..-++.+ +..|.....+++++|++|++.++...-+-
T Consensus 50 ~c~~~L~aL~gAi~G~~w~~l~~~~K~~L~~~~~~~~~~~ 89 (93)
T 3bqs_A 50 VCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLEGHH 89 (93)
T ss_dssp CCHHHHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHcCCCHHHCCHHHHHHHHHHHHHhhccc
Confidence 344445554 67888888999999999999988776543
No 289
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=28.74 E-value=1.9e+02 Score=23.26 Aligned_cols=82 Identities=9% Similarity=-0.005 Sum_probs=47.6
Q ss_pred CceEEEeccCCCC--CCChhcHHHHHHHHHHcCCceeeecCCCCCH--hhHHHHH-hcCCcEE-eecccccHHHHHHHhc
Q 025169 82 LGVVGIDLSGNPT--KGEWTTFLPALKFAREQGLQITLHCGEIPNK--EEIQSML-DFLPQRI-GHACCFEEEEWRKLKS 155 (257)
Q Consensus 82 ~~vvg~~l~g~~~--~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~--~~i~~~l-~lg~~ri-~Hg~~l~~~~~~~l~~ 155 (257)
...+|+-+..... .+-...+..+-+.|+++|..+.+........ ..+.+.+ ..+++-+ .-+...+++.++.+.+
T Consensus 8 s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~ 87 (288)
T 3gv0_A 8 TNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPNDPRVRFMTE 87 (288)
T ss_dssp CCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTCHHHHHHHH
T ss_pred CCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCcHHHHHHhh
Confidence 3477776543221 1222445566677888899888876543211 2222323 3567653 3344445577888999
Q ss_pred CCCcEEec
Q 025169 156 SKIPVEIC 163 (257)
Q Consensus 156 ~~i~v~~c 163 (257)
.|++++.+
T Consensus 88 ~~iPvV~i 95 (288)
T 3gv0_A 88 RNMPFVTH 95 (288)
T ss_dssp TTCCEEEE
T ss_pred CCCCEEEE
Confidence 99998764
No 290
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=28.70 E-value=1.1e+02 Score=27.62 Aligned_cols=101 Identities=16% Similarity=0.037 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHHhhc-cceeeeeccCccccccCC---C---chh----hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHH
Q 025169 2 SKRSYMDAVVEGLRA-VSAVDVDFASRSIDVRRP---V---NTK----NMNDACNGTRGKKIYVRLLLSIDRRETTEAAM 70 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~-v~y~E~r~~p~~~~~~~~---~---~~~----~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~ 70 (257)
+.+.|.+++-+.... +-. .-+.+++ . ..+ +++++-++.+++|-+......+. .++++..
T Consensus 175 s~~~~a~~~ye~~~GGlDf--------iKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT--~~~~em~ 244 (432)
T 3nwr_A 175 SAAETAALVRELCEAGVDF--------IKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNIT--DDLDAMR 244 (432)
T ss_dssp CHHHHHHHHHHHHHHTCSE--------EECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC--SCHHHHH
T ss_pred CHHHHHHHHHHHHhcCCce--------eECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecC--CCHHHHH
Confidence 567888888887762 211 1111111 1 123 34444577888886666666666 3688888
Q ss_pred HHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 71 ETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 71 ~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+..+++.+.... .+=++.. . --+..+-.++++.++++|.|-+
T Consensus 245 ~Ra~~a~e~G~~-~~mvd~~----~---~G~~a~~~l~r~~~~~lh~HrA 286 (432)
T 3nwr_A 245 RHAELVEREGGS-CVMASIN----W---CGFSAIQSLRRTTPLVLHAHRN 286 (432)
T ss_dssp HHHHHHHHTTCC-EEEEEHH----H---HCHHHHHHHHHHCCSEEEEECT
T ss_pred HHHHHHHHcCCC-EEEEecc----C---CCHHHHHHHHhcCCceEEECcC
Confidence 888888776554 3334431 0 0122334445678999999954
No 291
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=28.66 E-value=2.6e+02 Score=23.41 Aligned_cols=131 Identities=12% Similarity=0.088 Sum_probs=76.5
Q ss_pred EEEEEEeeCCCCHHHHHHHHHHHHh-hCCCceEEEeccCCCCCCCh--hcHHHHHHHHHHcCCceeeecCCCCCHhhHHH
Q 025169 54 VRLLLSIDRRETTEAAMETVKLALE-MRDLGVVGIDLSGNPTKGEW--TTFLPALKFAREQGLQITLHCGEIPNKEEIQS 130 (257)
Q Consensus 54 ~~li~~~~r~~~~e~~~~~~~~~~~-~~~~~vvg~~l~g~~~~~~~--~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~ 130 (257)
..++....--.+.+++..+.+++++ .....++.+.+.+++...-| ....+..+...+.|+.+..-+. .++...+.
T Consensus 74 ~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~--dd~~~akr 151 (265)
T 1wv2_A 74 YTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTS--DDPIIARQ 151 (265)
T ss_dssp SEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEEC--SCHHHHHH
T ss_pred CEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHH
Confidence 3455544444578889899999888 55555888887776554322 3333344444445998875554 23555555
Q ss_pred HHhcCCcEE-eec------ccc-cHHHHHHHhcC-CCcEEecccccceeccccCCCcccHHHHHhcCCC-EEecC
Q 025169 131 MLDFLPQRI-GHA------CCF-EEEEWRKLKSS-KIPVEICLTSNIRTETISSLDIHHFVDLYKAQHP-LVLCT 195 (257)
Q Consensus 131 ~l~lg~~ri-~Hg------~~l-~~~~~~~l~~~-~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~-v~lgT 195 (257)
..++|++-+ -+| .-+ +++.++.+++. +++|.. - +.+. .-.....+++.|.. |.+||
T Consensus 152 l~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~--e-----GGI~--TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 152 LAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV--D-----AGVG--TASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp HHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE--E-----SCCC--SHHHHHHHHHHTCSEEEESH
T ss_pred HHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE--e-----CCCC--CHHHHHHHHHcCCCEEEECh
Confidence 556887643 222 222 78888888874 555432 1 1110 01237788888875 45554
No 292
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=28.60 E-value=24 Score=32.59 Aligned_cols=59 Identities=7% Similarity=-0.119 Sum_probs=38.6
Q ss_pred HHHHHhcCCCEEecCCCCCCCC-CChHHH-HHHH------HH--------hCCCCHHHHHHH-HHHHHHHcCCChH
Q 025169 181 FVDLYKAQHPLVLCTDDSGVFS-TSVSRE-YDLA------AS--------AFSLGRREMFQL-AKSAVKFIFANGR 239 (257)
Q Consensus 181 i~~l~~~Gv~v~lgTD~~~~~~-~~l~~E-~~~a------~~--------~~~ls~~~v~~~-~~n~~~~~~~~~~ 239 (257)
...+++.|....+++|..+... ...... .... .. ..++++.+++++ +.|++++.+++++
T Consensus 344 ~~~l~~~G~~~~i~sD~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAralGL~d~ 419 (566)
T 4ep8_C 344 EDVLHDLGAFSLTSSDSQAMGRVGEVILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHE 419 (566)
T ss_dssp HHHHHHHTSSCEECCCTTSSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTTT
T ss_pred HHHHHhCCCcceEeecccccccccccccccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 4557788999999999866553 222111 1100 00 024788999997 6999999999763
No 293
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=28.38 E-value=1.4e+02 Score=25.34 Aligned_cols=10 Identities=0% Similarity=0.079 Sum_probs=5.6
Q ss_pred CCCEEecCCC
Q 025169 188 QHPLVLCTDD 197 (257)
Q Consensus 188 Gv~v~lgTD~ 197 (257)
+..|--|.|+
T Consensus 196 ~f~v~~G~d~ 205 (307)
T 3s5o_A 196 DFQVLAGSAG 205 (307)
T ss_dssp SCEEEESSGG
T ss_pred CeEEEeCcHH
Confidence 4556556554
No 294
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=27.70 E-value=2.1e+02 Score=22.99 Aligned_cols=82 Identities=9% Similarity=0.030 Sum_probs=48.9
Q ss_pred HHHHHHHHcCCceeeecCCCC-CH----hhHHHHH-hcCCcEEe---ecccccHHHHHHHhcCCCcEEecccccceeccc
Q 025169 103 PALKFAREQGLQITLHCGEIP-NK----EEIQSML-DFLPQRIG---HACCFEEEEWRKLKSSKIPVEICLTSNIRTETI 173 (257)
Q Consensus 103 ~~~~~A~~~gl~v~~Ha~E~~-~~----~~i~~~l-~lg~~ri~---Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~ 173 (257)
.+.+.|+++|+|+..--.+.. +. ..+.+.+ ++++|.+. -+-.++++.++....+- +-+-|+ -.
T Consensus 43 ~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~--iNiHpS------LL 114 (211)
T 3p9x_A 43 KVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRI--VNIHPS------LL 114 (211)
T ss_dssp HHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSE--EEEESS------CT
T ss_pred HHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCe--EEECCc------cC
Confidence 467889999999875432221 11 2333444 36888653 33446888888876332 222232 12
Q ss_pred cCC-CcccHHHHHhcCCCEE
Q 025169 174 SSL-DIHHFVDLYKAQHPLV 192 (257)
Q Consensus 174 ~~~-~~~pi~~l~~~Gv~v~ 192 (257)
|.+ |.+|+.+.+.+|.+.+
T Consensus 115 P~yrG~~pi~~Ai~~G~~~t 134 (211)
T 3p9x_A 115 PAFPGLHAIEQAIRANVKVT 134 (211)
T ss_dssp TSSCSSCHHHHHHHTTCSEE
T ss_pred CCCCCccHHHHHHHcCCCeE
Confidence 222 5789999999988753
No 295
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=27.41 E-value=2e+02 Score=23.53 Aligned_cols=39 Identities=8% Similarity=-0.071 Sum_probs=20.8
Q ss_pred HhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCC
Q 025169 43 ACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDL 82 (257)
Q Consensus 43 ~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~ 82 (257)
+.+++.++|+-.+.|+.... .+.++.....+.+.+...+
T Consensus 125 v~~a~~~~g~~lKvIlEt~~-L~~e~i~~a~ria~eaGAD 163 (234)
T 1n7k_A 125 IVKLAKSYGAVVKVILEAPL-WDDKTLSLLVDSSRRAGAD 163 (234)
T ss_dssp HHHHHHHTTCEEEEECCGGG-SCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhhcCCeEEEEEeccC-CCHHHHHHHHHHHHHhCCC
Confidence 33455555665555554433 3455555666666655544
No 296
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=27.39 E-value=1.9e+02 Score=23.29 Aligned_cols=81 Identities=9% Similarity=0.000 Sum_probs=44.3
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCH---h---hHHHHHhcCCcEE-eecccccHHHHHHHhc
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK---E---EIQSMLDFLPQRI-GHACCFEEEEWRKLKS 155 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~---~---~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~ 155 (257)
..+|+-+......+-...+..+-+.|+++|..+.+........ . .+...+..+++-+ ..+...+++.++.+.+
T Consensus 9 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~ 88 (290)
T 2rgy_A 9 GIIGLFVPTFFGSYYGTILKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLHDEDLDELHR 88 (290)
T ss_dssp CEEEEECSCSCSHHHHHHHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHH
T ss_pred CeEEEEeCCCCCchHHHHHHHHHHHHHHCCCEEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCCHHHHHHHhh
Confidence 3667654321111112445556667888898887765433221 1 2233334567753 3344445667788888
Q ss_pred CCCcEEec
Q 025169 156 SKIPVEIC 163 (257)
Q Consensus 156 ~~i~v~~c 163 (257)
.|++++..
T Consensus 89 ~~iPvV~~ 96 (290)
T 2rgy_A 89 MHPKMVFL 96 (290)
T ss_dssp HCSSEEEE
T ss_pred cCCCEEEE
Confidence 89988654
No 297
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=27.27 E-value=2.4e+02 Score=22.56 Aligned_cols=65 Identities=6% Similarity=-0.125 Sum_probs=39.3
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCH---hhHHHHHhcCCcEE-eecccccHHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNK---EEIQSMLDFLPQRI-GHACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~---~~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~~~i~v~~c 163 (257)
..+..+-+.|+++|..+.+...+.... ..+...+..+++-| ..+...+++.++.+.+.+++++..
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~ 93 (287)
T 3bbl_A 25 QFLSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYNDPRVQFLLKQKFPFVAF 93 (287)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTCHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCcHHHHHHHhcCCCEEEE
Confidence 455666677888998887765432211 22334444567753 334434456678888889998654
No 298
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.12 E-value=1.6e+02 Score=24.63 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=8.1
Q ss_pred cccccHHHHHHHhc
Q 025169 142 ACCFEEEEWRKLKS 155 (257)
Q Consensus 142 g~~l~~~~~~~l~~ 155 (257)
|+.++++.+..|++
T Consensus 143 g~~l~~~~~~~La~ 156 (293)
T 1f6k_A 143 GVNMGIEQFGELYK 156 (293)
T ss_dssp CCCCCHHHHHHHHT
T ss_pred CcCCCHHHHHHHhc
Confidence 34556666666654
No 299
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=27.12 E-value=2.8e+02 Score=23.22 Aligned_cols=133 Identities=5% Similarity=0.033 Sum_probs=75.1
Q ss_pred hcHHHHHHHHHHcCCceeeecC-----CC---CCHhhHH----HHHhcCCcEEe----ecccccHHH----HHHHhcC--
Q 025169 99 TTFLPALKFAREQGLQITLHCG-----EI---PNKEEIQ----SMLDFLPQRIG----HACCFEEEE----WRKLKSS-- 156 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~-----E~---~~~~~i~----~~l~lg~~ri~----Hg~~l~~~~----~~~l~~~-- 156 (257)
+.++++++.|+++|+.+..-.+ |. .+++.+. .+.+.|+++|. ||+. +|.+ ++.+++.
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~-~P~~~~~lv~~l~~~~~ 202 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVG-TAGATRRLIEAVASEVP 202 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCC-CHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc-CHHHHHHHHHHHHHhCC
Confidence 4467888999999999863322 21 1344433 33458998864 7764 4443 4445443
Q ss_pred CCcEEecccccceeccccCCCcccHHHHHhcCCCEEecCCCCC--------CCCCChHHHHHHHHHhC----CCCHHHHH
Q 025169 157 KIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSG--------VFSTSVSREYDLAASAF----SLGRREMF 224 (257)
Q Consensus 157 ~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~--------~~~~~l~~E~~~a~~~~----~ls~~~v~ 224 (257)
++++.+-.-.+. +++.......+++|+...=+|=++. -.+.--++++..+.... +++.+.+.
T Consensus 203 ~~~l~~H~Hn~~------Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~~~idl~~l~ 276 (302)
T 2ftp_A 203 RERLAGHFHDTY------GQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHTGVDMHALV 276 (302)
T ss_dssp GGGEEEEEBCTT------SCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCBCCCCHHHHH
T ss_pred CCeEEEEeCCCc------cHHHHHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHH
Confidence 233332221121 1234567788899997665555411 12222346665555544 56788888
Q ss_pred HHHHHHHHHcCCCh
Q 025169 225 QLAKSAVKFIFANG 238 (257)
Q Consensus 225 ~~~~n~~~~~~~~~ 238 (257)
++++.-.+.+..+-
T Consensus 277 ~~~~~~~~~~~~~~ 290 (302)
T 2ftp_A 277 DAGQRICAVLGKSN 290 (302)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHHHHHHhCCCC
Confidence 88776666666543
No 300
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=27.08 E-value=3e+02 Score=23.64 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=57.0
Q ss_pred eEEEeccC-CCC--CCChhcHHHHHHHHHH-cCCceeee-cCC-CCCHhhHHHHHhcCCc--EEeeccccc--HHHHHHH
Q 025169 84 VVGIDLSG-NPT--KGEWTTFLPALKFARE-QGLQITLH-CGE-IPNKEEIQSMLDFLPQ--RIGHACCFE--EEEWRKL 153 (257)
Q Consensus 84 vvg~~l~g-~~~--~~~~~~~~~~~~~A~~-~gl~v~~H-a~E-~~~~~~i~~~l~lg~~--ri~Hg~~l~--~~~~~~l 153 (257)
++.++..+ .+. ..+++++.++++..++ .++|+.+- ++. +..++-++.+++.|++ -+...+... ++.+...
T Consensus 97 iIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~la 176 (323)
T 4djd_D 97 LIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTAAC 176 (323)
T ss_dssp EEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHH
T ss_pred EEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHHHH
Confidence 55555432 232 2466677777666544 58999887 211 1123445677777754 244444443 6778888
Q ss_pred hcCCCcEEecccccceeccccCCCcccHHHHHhcCCC
Q 025169 154 KSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHP 190 (257)
Q Consensus 154 ~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~ 190 (257)
++.|.+++.....++.. -..-+..+.++||+
T Consensus 177 a~~g~~vVlmh~~d~~~------~~~l~~~a~~~GI~ 207 (323)
T 4djd_D 177 MVHKHNIIARSPLDINI------CKQLNILINEMNLP 207 (323)
T ss_dssp HHHTCEEEEECSSCHHH------HHHHHHHHHTTTCC
T ss_pred HHhCCeEEEEccchHHH------HHHHHHHHHHcCCC
Confidence 99998887632212211 11124567788984
No 301
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=26.90 E-value=2.4e+02 Score=22.43 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=48.4
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcEEe-eccc-----ccHHHHHHH
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQRIG-HACC-----FEEEEWRKL 153 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~ri~-Hg~~-----l~~~~~~~l 153 (257)
..+|+-+......+-...+..+-+.|+++|..+.+...+..... .+...+..+++-+. .+.. ...+.++.+
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ 95 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNL 95 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHH
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHH
Confidence 46776554322223335566777788999999888765542221 22333445777543 3322 234678888
Q ss_pred hcCCCcEEec
Q 025169 154 KSSKIPVEIC 163 (257)
Q Consensus 154 ~~~~i~v~~c 163 (257)
.+.|++++..
T Consensus 96 ~~~~iPvV~~ 105 (298)
T 3tb6_A 96 EKNGIPFAMI 105 (298)
T ss_dssp HHTTCCEEEE
T ss_pred HhcCCCEEEE
Confidence 9999998764
No 302
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=26.78 E-value=1.9e+02 Score=24.96 Aligned_cols=75 Identities=9% Similarity=0.007 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhH---HHHHhcCCcEE
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEI---QSMLDFLPQRI 139 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i---~~~l~lg~~ri 139 (257)
+.+...+.++...+..-++++-.+..|.-...+.++.+++++.+....++|.+++|.....+.+ +.+-++|++-+
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadav 122 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGL 122 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 4555566666655433334444444454445677777777776444468999998865433333 33444687753
No 303
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=26.53 E-value=2e+02 Score=22.84 Aligned_cols=82 Identities=11% Similarity=0.066 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCceeeecCCC-CCH----hhHHHHH-hcCCcEEee---cccccHHHHHHHhcCCCcEEecccccceeccc
Q 025169 103 PALKFAREQGLQITLHCGEI-PNK----EEIQSML-DFLPQRIGH---ACCFEEEEWRKLKSSKIPVEICLTSNIRTETI 173 (257)
Q Consensus 103 ~~~~~A~~~gl~v~~Ha~E~-~~~----~~i~~~l-~lg~~ri~H---g~~l~~~~~~~l~~~~i~v~~cP~SN~~l~~~ 173 (257)
.+.+.|+++|+|+...-.+. .+. ..+.+.+ ++++|.+.= +-.++++.++....+-+.+ | |+ -.
T Consensus 44 ~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNi-H-pS------LL 115 (212)
T 3av3_A 44 KVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNI-H-PS------LL 115 (212)
T ss_dssp HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEE-E-SS------CT
T ss_pred HHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEE-e-cC------cC
Confidence 46688999999987533222 111 1333444 368886532 3345888888775332222 1 21 12
Q ss_pred cCC-CcccHHHHHhcCCCEE
Q 025169 174 SSL-DIHHFVDLYKAQHPLV 192 (257)
Q Consensus 174 ~~~-~~~pi~~l~~~Gv~v~ 192 (257)
|.| |.+|+.+.+.+|.+.+
T Consensus 116 P~yrG~~pi~~Ai~~G~~~t 135 (212)
T 3av3_A 116 PAFPGKDAIGQAYRAGVSET 135 (212)
T ss_dssp TSSCSTTHHHHHHHHTCSEE
T ss_pred CCCCCcCHHHHHHHcCCCeE
Confidence 222 5789999998887643
No 304
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=26.51 E-value=93 Score=25.79 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=30.6
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhc-CCcEEe
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF-LPQRIG 140 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~l-g~~ri~ 140 (257)
+.+.++.+++.|+++|+.+.+=+ .+.+++..++.+ |++.||
T Consensus 135 ~~~~l~~l~~~a~~lGl~~lvEv---~~~eE~~~A~~l~g~~iIG 176 (251)
T 1i4n_A 135 TAEQIKEIYEAAEELGMDSLVEV---HSREDLEKVFSVIRPKIIG 176 (251)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE---CSHHHHHHHHTTCCCSEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEEe---CCHHHHHHHHhcCCCCEEE
Confidence 44678888888888888766655 346677788888 888764
No 305
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=26.26 E-value=2.5e+02 Score=22.51 Aligned_cols=65 Identities=12% Similarity=0.067 Sum_probs=40.4
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHhh----HHHHHhcCCcEE-eeccccc--HHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKEE----IQSMLDFLPQRI-GHACCFE--EEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~----i~~~l~lg~~ri-~Hg~~l~--~~~~~~l~~~~i~v~~c 163 (257)
..+..+-+.|+++|..+.++.....+.+. +..++..+++-| ..+...+ .+.++.+.+.|++++.+
T Consensus 21 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 21 RCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 45666777789999999885422223322 333444577753 3343332 56788889999998764
No 306
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=25.82 E-value=59 Score=23.99 Aligned_cols=45 Identities=22% Similarity=0.212 Sum_probs=32.4
Q ss_pred CHhhHHHHHhcC--CcE--Eeecc---cccHHHHHHHhcCCCcEEecccccc
Q 025169 124 NKEEIQSMLDFL--PQR--IGHAC---CFEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 124 ~~~~i~~~l~lg--~~r--i~Hg~---~l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
+++++...+.+. ++. ||-|- .++++..+.|.++||.+++.+|.|.
T Consensus 55 ~~~~l~~l~~~~p~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~m~T~aA 106 (128)
T 2fi9_A 55 TQEDISRVLEESDQIEVLLIGTGVELLRLPEELRVLLWEKRISSDTMSTGAA 106 (128)
T ss_dssp CTGGGHHHHHTGGGCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEEECHHHH
T ss_pred CHHHHHHHHhcCCCCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEEeCHHHH
Confidence 345555555555 554 56664 4589999999999999999888764
No 307
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=25.44 E-value=1.4e+02 Score=25.12 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=8.2
Q ss_pred cccccHHHHHHHhc
Q 025169 142 ACCFEEEEWRKLKS 155 (257)
Q Consensus 142 g~~l~~~~~~~l~~ 155 (257)
|+.++++.+..|++
T Consensus 139 g~~l~~~~~~~La~ 152 (297)
T 2rfg_A 139 VVDIKPETMARLAA 152 (297)
T ss_dssp SCCCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHHc
Confidence 45556666666654
No 308
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=25.40 E-value=2.4e+02 Score=22.07 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=42.2
Q ss_pred hcHHHHHHHHHHcCCceeeecCCC-CCHh----hHHHHHhcC-CcEE-eeccc--ccHHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEI-PNKE----EIQSMLDFL-PQRI-GHACC--FEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~-~~~~----~i~~~l~lg-~~ri-~Hg~~--l~~~~~~~l~~~~i~v~~c 163 (257)
..++.+-+.|+++|..+.+....+ .+.+ .+...+..+ ++-| ..+.. ..++.++.+.+.|++++..
T Consensus 17 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 17 QVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 456667777899999998886321 1222 233444457 8754 34432 3567789999999998765
No 309
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=25.39 E-value=92 Score=28.14 Aligned_cols=107 Identities=12% Similarity=0.087 Sum_probs=61.6
Q ss_pred ChHHHHHHHHHHhhc-cceeeeeccCccccccCCC---chh----hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHH
Q 025169 2 SKRSYMDAVVEGLRA-VSAVDVDFASRSIDVRRPV---NTK----NMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETV 73 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~-v~y~E~r~~p~~~~~~~~~---~~~----~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~ 73 (257)
+.+.|.+++-+.... +-. -=......++. ..+ +++++-++.+++|-+......+.. ++++..+..
T Consensus 166 s~~~~a~~~ye~~~GGlDf-----iKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiTa--~~~em~~Ra 238 (430)
T 2d69_A 166 SVEEYAEIAYELWSGGIDL-----LKDDENFTSFPFNRFEERVRKLYRVRDRVEAETGETKEYLINITG--PVNIMEKRA 238 (430)
T ss_dssp CHHHHHHHHHHHHHTTCSE-----EECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEECBCCS--SHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCcE-----eECCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCccEEEeecCC--CHHHHHHHH
Confidence 567888888887762 110 00011111111 123 334444777888866555555554 388888888
Q ss_pred HHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 74 KLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 74 ~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+.+.+.... .+=+++. ..-...++.+.+.+|+.++++|.|-+
T Consensus 239 ~~a~e~G~~-~~mvd~~----~~G~~a~~~l~~~~r~~~l~lh~HrA 280 (430)
T 2d69_A 239 EMVANEGGQ-YVMIDIV----VAGWSALQYMREVTEDLGLAIHAHRA 280 (430)
T ss_dssp HHHHHHTCC-EEEEEHH----HHCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHcCCC-eEEEEee----ccChHHHHHHHHHhhccCcEEEeccC
Confidence 888777654 3334432 11123466666777789999999964
No 310
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=25.31 E-value=1.5e+02 Score=20.69 Aligned_cols=45 Identities=7% Similarity=0.027 Sum_probs=33.8
Q ss_pred HHHHHhCCCCHHH---HHHHHHHHHHHcCCChHHHHHHHHHHHHHHhh
Q 025169 210 DLAASAFSLGRRE---MFQLAKSAVKFIFANGRVKEDLKEIFDLAEKK 254 (257)
Q Consensus 210 ~~a~~~~~ls~~~---v~~~~~n~~~~~~~~~~~k~~l~~~~~~~~~~ 254 (257)
+.....+++++++ ++.+...+++..+++++.+++++..+......
T Consensus 65 ~~~H~~~~I~~~~f~~wl~~~~~al~~~~~~~~~~~~~~~~~~~~a~~ 112 (116)
T 1dlw_A 65 KEVHANMGVSNAQFTTVIGHLRSALTGAGVAAALVEQTVAVAETVRGD 112 (116)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTHHH
T ss_pred HHHhcCCCcCHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 3344456788766 45566899999999999999999998766543
No 311
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=25.30 E-value=1.3e+02 Score=25.28 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE
Q 025169 103 PALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI 139 (257)
Q Consensus 103 ~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri 139 (257)
+.++.+++.|++|.+-.- .+++.++.++++|++.|
T Consensus 259 ~~v~~~~~~Gl~V~~WTV--n~~~~~~~l~~~GVDgI 293 (313)
T 3l12_A 259 ELVAEAHDLGLIVLTWTV--NEPEDIRRMATTGVDGI 293 (313)
T ss_dssp HHHHHHHHTTCEEEEBCC--CSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCEEEEEcC--CCHHHHHHHHHcCCCEE
Confidence 445555666666555542 23444455555565543
No 312
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=25.25 E-value=2.3e+02 Score=21.94 Aligned_cols=17 Identities=12% Similarity=0.134 Sum_probs=8.9
Q ss_pred hcHHHHHHHHHHcCCce
Q 025169 99 TTFLPALKFAREQGLQI 115 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v 115 (257)
+.+.++.+.+++.|+.+
T Consensus 227 ~~~~~~~~~~~~~G~~v 243 (245)
T 3c8f_A 227 ETMERVKGILEQYGHKV 243 (245)
T ss_dssp HHHHHHHHHHHTTTCCB
T ss_pred HHHHHHHHHHHhcCCee
Confidence 44555555555555544
No 313
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=25.22 E-value=3.7e+02 Score=24.09 Aligned_cols=26 Identities=4% Similarity=0.008 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHhhccceeeeecc-Ccc
Q 025169 3 KRSYMDAVVEGLRAVSAVDVDFA-SRS 28 (257)
Q Consensus 3 ~~~y~~~~~~~~~~v~y~E~r~~-p~~ 28 (257)
.+.|++++...-..+.|+|+=++ |+.
T Consensus 196 ~~dy~~~a~~l~~~aD~ieiNiscPnt 222 (443)
T 1tv5_A 196 VDDLKYCINKIGRYADYIAINVSSPNT 222 (443)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCTTS
T ss_pred HHHHHHHHHHHhcCCCEEEEeccCCCC
Confidence 35777776664445789999987 774
No 314
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=25.16 E-value=74 Score=26.60 Aligned_cols=42 Identities=2% Similarity=0.032 Sum_probs=23.8
Q ss_pred ccceeeeeccCccccccC-CCchhhhhhHhhcccCCCcEEEEE
Q 025169 16 AVSAVDVDFASRSIDVRR-PVNTKNMNDACNGTRGKKIYVRLL 57 (257)
Q Consensus 16 ~v~y~E~r~~p~~~~~~~-~~~~~~~~~~~~a~~~~gir~~li 57 (257)
.+.++|++..|....... ..-++-++++.+..++.|+++..+
T Consensus 28 G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 70 (340)
T 2zds_A 28 GYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAI 70 (340)
T ss_dssp TCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEe
Confidence 488999987642111100 001223555667788899998654
No 315
>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: c.1.14.1 d.58.9.1 PDB: 3axk_A* 3axm_A* 1rlc_L* 4rub_A* 3rub_L 1ej7_L 1aa1_L* 1aus_L 1rbo_L* 1rco_L* 1rcx_L* 1rxo_L* 1gk8_A* 1ir2_A* 1uzd_A* 1uzh_A* 2v69_A* 1uwa_A* 2v63_A* 2v67_A* ...
Probab=25.01 E-value=1.3e+02 Score=27.62 Aligned_cols=111 Identities=18% Similarity=0.132 Sum_probs=61.4
Q ss_pred ChHHHHHHHHHHhhc-ccee---eeecc-CccccccCCCchhhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHH
Q 025169 2 SKRSYMDAVVEGLRA-VSAV---DVDFA-SRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLA 76 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~-v~y~---E~r~~-p~~~~~~~~~~~~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~ 76 (257)
+.+.|.+++-+.... +-.+ |.-.+ |+..-+++ .+-+++++-++.+++|-+-.....+.- .++++..+..+.+
T Consensus 181 s~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR--~~~v~eai~rA~~eTGe~k~~~~NiTa-~~~~eM~~Ra~~a 257 (477)
T 1wdd_A 181 SAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDR--FVFCAEAIYKSQAETGEIKGHYLNATA-GTCEEMIKRAVFA 257 (477)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCTTCSSBTTBCHHHH--HHHHHHHHHHHHHHHSSCCEEEEECCC-SSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCceeeCCccCCCCCCCcHHHH--HHHHHHHHHHHHHhhCCcceeecCcCC-CCHHHHHHHHHHH
Confidence 567888888887762 2110 11111 11100000 111344455777888866555555553 2478888888888
Q ss_pred HhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 77 LEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 77 ~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
.+.... .+-+++. ..-...+..+.+.||..|+++|.|-+
T Consensus 258 ~e~G~~-~~mvd~~----~~G~~a~~~l~~~~r~~~l~lh~HRA 296 (477)
T 1wdd_A 258 RELGVP-IVMHDYL----TGGFTANTSLAHYCRDNGLLLHIHRA 296 (477)
T ss_dssp HHHTCS-EEEEEHH----HHCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHhCCC-eEEEecc----ccCcHHHHHHHHhhccCCeEEEecCC
Confidence 776543 3334431 01123466666777789999999953
No 316
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=24.77 E-value=1.1e+02 Score=25.58 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=32.9
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
+++.++.+.+.|++.|+-+-+=+ .+.+++..++.+|++.||
T Consensus 138 ~~~~l~~l~~~A~~lGl~~LvEV---h~~~El~rAl~~~a~iIG 178 (258)
T 4a29_A 138 TERELESLLEYARSYGMEPLILI---NDENDLDIALRIGARFIG 178 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEE---SSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHHhHHHHHhc---chHHHHHHHhcCCCcEEE
Confidence 56789999999999998766543 457788888999998875
No 317
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=24.74 E-value=1.2e+02 Score=24.84 Aligned_cols=65 Identities=12% Similarity=-0.003 Sum_probs=39.7
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCCHh--h-HHHHHhcCCcE-EeecccccHHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPNKE--E-IQSMLDFLPQR-IGHACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~~~--~-i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~~~i~v~~c 163 (257)
..+..+-+.|+++|..+.+......... . +......+++- |.-+...+++.++.+.+.|++++..
T Consensus 44 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i 112 (305)
T 3huu_A 44 DVLNGINQACNVRGYSTRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIV 112 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEE
Confidence 4455666778889998888765432111 1 12223346665 3334444567788888999998764
No 318
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=24.67 E-value=1e+02 Score=25.83 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=31.7
Q ss_pred ChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 97 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
+++.++.+++.|++.|+-+.+-+ .+.+++..++.+|++.||
T Consensus 154 ~~~~l~~l~~~a~~lGl~~lvev---h~~eEl~~A~~~ga~iIG 194 (272)
T 3tsm_A 154 DDDLAKELEDTAFALGMDALIEV---HDEAEMERALKLSSRLLG 194 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE---CSHHHHHHHTTSCCSEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEEe---CCHHHHHHHHhcCCCEEE
Confidence 56789999999999998765444 346777788888998775
No 319
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=24.50 E-value=2.9e+02 Score=24.61 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=41.2
Q ss_pred eEEEeccCCCCC-CChhcHHHHHHHHHHc-----CCceeeecC-CCCCHhhHHHHHhcCCcEEeecccc-cHHHHHHHh
Q 025169 84 VVGIDLSGNPTK-GEWTTFLPALKFAREQ-----GLQITLHCG-EIPNKEEIQSMLDFLPQRIGHACCF-EEEEWRKLK 154 (257)
Q Consensus 84 vvg~~l~g~~~~-~~~~~~~~~~~~A~~~-----gl~v~~Ha~-E~~~~~~i~~~l~lg~~ri~Hg~~l-~~~~~~~l~ 154 (257)
+..+-+.|...+ .+++.+.++++.+++. +..+++-+. ..-+.+.+....+.|.+++..|++. +++.++.|.
T Consensus 105 i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~ 183 (457)
T 1olt_A 105 VSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVN 183 (457)
T ss_dssp EEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHT
T ss_pred eEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhC
Confidence 445555543333 4678899999998873 234444221 1112334444445799999999875 666555553
No 320
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=24.45 E-value=1.4e+02 Score=26.53 Aligned_cols=74 Identities=9% Similarity=0.073 Sum_probs=40.9
Q ss_pred hcccCCCcEEEEEEEeeC--CCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeec
Q 025169 45 NGTRGKKIYVRLLLSIDR--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHC 119 (257)
Q Consensus 45 ~a~~~~gir~~li~~~~r--~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha 119 (257)
++++..|++.+.+.. .. ..+++..++.++...+.....+.-+...+...++..+.+.++.+.|+++|+.+++=+
T Consensus 197 ~~~~~~G~~v~~v~~-d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~ 272 (486)
T 1js3_A 197 RAGLIGGVKLKAIPS-DGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDA 272 (486)
T ss_dssp HHHHHHTCEEEEECC-CTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHhCCCceEEeec-CCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEeh
Confidence 344445777666643 22 246777666665332211111111112343334566789999999999998865544
No 321
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=24.38 E-value=2.4e+02 Score=22.39 Aligned_cols=80 Identities=14% Similarity=0.073 Sum_probs=43.9
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhh----HHHHHhcCCcE-EeecccccHHHHHHHhc-C
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEE----IQSMLDFLPQR-IGHACCFEEEEWRKLKS-S 156 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~----i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~-~ 156 (257)
..+|+-+......+....+..+-+.|+++|..+.+...+. +.+. +...+..+++- |..+...++..++.+.+ .
T Consensus 8 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~~~~ 86 (289)
T 1dbq_A 8 KSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWN-NLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYR 86 (289)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEECTT-CHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHHTT
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEcCCC-ChHHHHHHHHHHHhCCCCEEEEEeccCCHHHHHHHHhcc
Confidence 3566654321111122445566677888898887765433 2222 23333457775 44444445566777765 7
Q ss_pred CCcEEec
Q 025169 157 KIPVEIC 163 (257)
Q Consensus 157 ~i~v~~c 163 (257)
|++++..
T Consensus 87 ~iPvV~~ 93 (289)
T 1dbq_A 87 HIPMVVM 93 (289)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 8987653
No 322
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=24.37 E-value=2e+02 Score=23.05 Aligned_cols=74 Identities=7% Similarity=-0.063 Sum_probs=41.1
Q ss_pred hhhhhHhhcccCC-CcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCcee
Q 025169 38 KNMNDACNGTRGK-KIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQIT 116 (257)
Q Consensus 38 ~~~~~~~~a~~~~-gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~ 116 (257)
+.++.+.+++++. |....+..+.....+++...+.++.....+-+ |+-+.+. ..+.....++.+++.|+|+.
T Consensus 26 ~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vd---giii~~~----~~~~~~~~~~~~~~~~iPvV 98 (304)
T 3gbv_A 26 DVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPD---GVMFAPT----VPQYTKGFTDALNELGIPYI 98 (304)
T ss_dssp HHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCS---EEEECCS----SGGGTHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCC---EEEECCC----ChHHHHHHHHHHHHCCCeEE
Confidence 3444455666666 77777766554444565555555555443333 4333321 12345566677777899876
Q ss_pred ee
Q 025169 117 LH 118 (257)
Q Consensus 117 ~H 118 (257)
+-
T Consensus 99 ~~ 100 (304)
T 3gbv_A 99 YI 100 (304)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 323
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=24.31 E-value=2.2e+02 Score=26.09 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=59.8
Q ss_pred ChHHHHHHHHHHhhc-cceeeeeccCccccccCC-C-----chh----hhhhHhhcccCCCcEEEEEEEeeCCCCHHHHH
Q 025169 2 SKRSYMDAVVEGLRA-VSAVDVDFASRSIDVRRP-V-----NTK----NMNDACNGTRGKKIYVRLLLSIDRRETTEAAM 70 (257)
Q Consensus 2 ~~~~y~~~~~~~~~~-v~y~E~r~~p~~~~~~~~-~-----~~~----~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~ 70 (257)
+.+.|.+++-+.... +-. .-+.+++ | ..+ +++++-++.+++|=+-.+...+.- .++++..
T Consensus 190 s~~~~a~~~ye~~~GGlDf--------IKDDE~l~~Qpf~p~~eRv~~v~eai~rA~~eTGe~K~~~~NiTa-~~~~eM~ 260 (493)
T 4f0h_A 190 SGKNYGRVVYEALKGGLDF--------VKDDENINSQPFMRWRERYLFVMEAVNKAAAATGEVKGHYLNVTA-ATMEEMY 260 (493)
T ss_dssp CHHHHHHHHHHHHHHTCSE--------EECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCC-SSHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCc--------cccccccCCCCCccHHHHHHHHHHHHHHHHHhHCCcceEEeecCC-CCHHHHH
Confidence 567888888877662 211 1111121 1 123 344444777888843333333332 2477888
Q ss_pred HHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 71 ETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 71 ~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
+..+.+.+.... .+-+++. . -..-+..+...||+.++++|.|-+
T Consensus 261 ~Ra~~a~e~G~~-~vmvd~~----~-G~~a~~~La~~~r~~~l~LH~HRA 304 (493)
T 4f0h_A 261 ARAQLAKELGSV-IIMIDLV----I-GYTAIQTMAKWARDNDMILHLHRA 304 (493)
T ss_dssp HHHHHHHHHTCS-EEEEEGG----G-CHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHhcCCC-eEEEecc----c-ccchhHHHHHHHHHcCceEEeccC
Confidence 888888777654 3334432 1 124566777778888999999964
No 324
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=24.04 E-value=2.1e+02 Score=25.60 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEeccCCC----CCC-ChhcHHHH-HHHHHHcCCc---eeeecCCCCCH----------
Q 025169 65 TTEAAMETVKLALEMRDLGVVGIDLSGNP----TKG-EWTTFLPA-LKFAREQGLQ---ITLHCGEIPNK---------- 125 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~~vvg~~l~g~~----~~~-~~~~~~~~-~~~A~~~gl~---v~~Ha~E~~~~---------- 125 (257)
.++.++..++.+.+...+-++.+.-.... ++. +++.|... ...|++.++| |.+|.-=..+.
T Consensus 23 n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~a 102 (420)
T 2fiq_A 23 HPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDAA 102 (420)
T ss_dssp CHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhhh
Confidence 45666666666665555444444322111 221 25566554 4456777888 88887433222
Q ss_pred -----hhHHHHHhcCCcEE
Q 025169 126 -----EEIQSMLDFLPQRI 139 (257)
Q Consensus 126 -----~~i~~~l~lg~~ri 139 (257)
+.+..+++.|-+.+
T Consensus 103 m~~a~e~i~~aI~aGFtSV 121 (420)
T 2fiq_A 103 MEKSVELVKAYVRAGFSKI 121 (420)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred hhhHHHHHHHHHHhCCCEE
Confidence 44667777777654
No 325
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.01 E-value=1.5e+02 Score=23.63 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=10.4
Q ss_pred ChhcHHHHHHHHHHcCCc
Q 025169 97 EWTTFLPALKFAREQGLQ 114 (257)
Q Consensus 97 ~~~~~~~~~~~A~~~gl~ 114 (257)
+.+.+++.++.|++.|.+
T Consensus 87 ~~~~~~~~i~~A~~lGa~ 104 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVK 104 (257)
T ss_dssp SHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHhCCC
Confidence 345566666666666654
No 326
>1em9_A GAG polyprotein capsid protein P27; virus/viral protein; 2.05A {Rous sarcoma virus - prague C} SCOP: a.73.1.1
Probab=23.72 E-value=1.4e+02 Score=22.79 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=25.5
Q ss_pred CEEecCCCCCCCC--CChHHHHHHHHHhC-----------------CCCHHHHHHHHH
Q 025169 190 PLVLCTDDSGVFS--TSVSREYDLAASAF-----------------SLGRREMFQLAK 228 (257)
Q Consensus 190 ~v~lgTD~~~~~~--~~l~~E~~~a~~~~-----------------~ls~~~v~~~~~ 228 (257)
||.|.|-++..-. .-+..|++.++..+ .|++.|+.++++
T Consensus 1 ~~~~~~~~~~w~pl~~K~ikeLk~A~~~yG~~aP~T~a~lEaL~~~~L~P~Dwk~laR 58 (154)
T 1em9_A 1 PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMR 58 (154)
T ss_dssp CEEECSSSEEECCCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHTSSCCCHHHHHHHHH
T ss_pred CeeeecCCCCccCCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHcCCCChHHHHHHHH
Confidence 5677777665444 35667777776553 478888877754
No 327
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=23.61 E-value=1.5e+02 Score=26.51 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=40.7
Q ss_pred CCCcEEEEEEEeeC-CCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecC
Q 025169 49 GKKIYVRLLLSIDR-RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 120 (257)
Q Consensus 49 ~~gir~~li~~~~r-~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~ 120 (257)
-.|.+.+.+.+-.+ ..+++..++.++.........+.-+...+...++..+.+.++.+.|+++|+.+++-++
T Consensus 207 ~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA 279 (481)
T 4e1o_A 207 ISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAA 279 (481)
T ss_dssp HHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred hCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehh
Confidence 34677666643111 2467777777654332211111111223433445667899999999999988766553
No 328
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=23.59 E-value=1.7e+02 Score=25.25 Aligned_cols=91 Identities=14% Similarity=0.041 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhhCCC-ceEEEeccCCCCC--CChh---cHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcE
Q 025169 65 TTEAAMETVKLALEMRDL-GVVGIDLSGNPTK--GEWT---TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQR 138 (257)
Q Consensus 65 ~~e~~~~~~~~~~~~~~~-~vvg~~l~g~~~~--~~~~---~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~r 138 (257)
+|+++.+.++.. .-+ .-++++-++..+. ..|. .|..+-+..+..++|+.+|=|-+.+++.+...-++|.+.
T Consensus 154 dPeea~~Fv~~T---gvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~~ 230 (323)
T 2isw_A 154 EPQDAKKFVELT---GVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKM 230 (323)
T ss_dssp CHHHHHHHHHHH---CCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHH---CCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhcccc
Confidence 577776666532 222 1234443332333 1222 233444444555999999966544444443333466543
Q ss_pred EeecccccHHHHHHHhcCCCc
Q 025169 139 IGHACCFEEEEWRKLKSSKIP 159 (257)
Q Consensus 139 i~Hg~~l~~~~~~~l~~~~i~ 159 (257)
.-.+-+++++++...+.||.
T Consensus 231 -~~~~Gvp~e~i~~ai~~GV~ 250 (323)
T 2isw_A 231 -PDAVGVPIESIVHAIGEGVC 250 (323)
T ss_dssp -TTCBCCCHHHHHHHHHTTEE
T ss_pred -ccCCCCCHHHHHHHHHCCCe
Confidence 22334678888888888864
No 329
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=23.26 E-value=2.6e+02 Score=22.49 Aligned_cols=65 Identities=20% Similarity=0.166 Sum_probs=41.7
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCC-CHh----hHHHHHhcCCcEEe-eccccc--HHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIP-NKE----EIQSMLDFLPQRIG-HACCFE--EEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~-~~~----~i~~~l~lg~~ri~-Hg~~l~--~~~~~~l~~~~i~v~~c 163 (257)
..+..+-+.|+++|..+.+...++. +++ .+..++..+++-|. .+...+ ...++.+.+.|++++..
T Consensus 20 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 20 SLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAV 92 (297)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 4455666778889999988775532 332 23344445777543 333333 66788899999998764
No 330
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=23.06 E-value=2.1e+02 Score=22.93 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=38.5
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeee-cCCCCCH---hhHHHHHhcCCcEE-eecccccHHHHHHHhcCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLH-CGEIPNK---EEIQSMLDFLPQRI-GHACCFEEEEWRKLKSSK 157 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~H-a~E~~~~---~~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~~~ 157 (257)
..+|+-+......+....+..+-+.|+++|..+.+. ..+.... ..+...+..+++-+ ..+...+++.++.+.+.|
T Consensus 9 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~~~~ 88 (290)
T 3clk_A 9 NVIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIALTDDNLQLLQSSD 88 (290)
T ss_dssp CEEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEEEEC----------CHHHHHHSSCCSEEEEESCC----CHHHHHCC-
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccCCHHHHHHHHhCC
Confidence 366765432111122244555666778889888776 4322111 12334444567753 333333455678888889
Q ss_pred CcEEec
Q 025169 158 IPVEIC 163 (257)
Q Consensus 158 i~v~~c 163 (257)
++++..
T Consensus 89 iPvV~~ 94 (290)
T 3clk_A 89 VPYCFL 94 (290)
T ss_dssp -CEEEE
T ss_pred CCEEEE
Confidence 988654
No 331
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=23.00 E-value=97 Score=21.57 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=28.5
Q ss_pred CCCHHHHHHH--HHHHHHHcCCChHHHHHHHHHHHHHHh
Q 025169 217 SLGRREMFQL--AKSAVKFIFANGRVKEDLKEIFDLAEK 253 (257)
Q Consensus 217 ~ls~~~v~~~--~~n~~~~~~~~~~~k~~l~~~~~~~~~ 253 (257)
+.+..-++.+ +..|....-+++++|++|.+.++..-.
T Consensus 49 ~~~~~~L~aL~gAi~G~~w~~l~~~~K~~L~~~~~~lk~ 87 (93)
T 3mab_A 49 SVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLEG 87 (93)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHcCCcHHHCCHHHHHHHHHHHHHhhc
Confidence 4555666555 688899999999999999888776543
No 332
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=22.96 E-value=4.1e+02 Score=23.98 Aligned_cols=134 Identities=12% Similarity=0.066 Sum_probs=77.7
Q ss_pred ccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCC--c-eEEEeccC-CCCCCChhcHHHHHHHHHH-cCCceeeecCC
Q 025169 47 TRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDL--G-VVGIDLSG-NPTKGEWTTFLPALKFARE-QGLQITLHCGE 121 (257)
Q Consensus 47 ~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~--~-vvg~~l~g-~~~~~~~~~~~~~~~~A~~-~gl~v~~Ha~E 121 (257)
...+.-+..+.+.+.+..+.++..+.++...++..+ + ..+.|+.. .....+++.+.++++..++ .++|+.+-.
T Consensus 85 E~tf~n~p~ia~~V~D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~dpe~~~~vVk~V~e~~dvPL~IDS-- 162 (446)
T 4djd_C 85 DKRFYHETAIAIQVSDNLSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDPAAFKAAVASVAAATQLNLVLMA-- 162 (446)
T ss_dssp GSCCCSCCEEEEEEETTSCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSSTHHHHHHHHHHHTTCCSEEEEEC--
T ss_pred CcCCCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCCHHHHHHHHHHHHHhCCCCEEEec--
Confidence 445556667888888877766666666655544321 1 22222221 0112346889998888765 488888864
Q ss_pred CCCHhhHHHHHhcCCcE--EeecccccH--HHHHHHhcCCCcEEecccccceeccccCCCcccHHHHHhcCCC
Q 025169 122 IPNKEEIQSMLDFLPQR--IGHACCFEE--EEWRKLKSSKIPVEICLTSNIRTETISSLDIHHFVDLYKAQHP 190 (257)
Q Consensus 122 ~~~~~~i~~~l~lg~~r--i~Hg~~l~~--~~~~~l~~~~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~ 190 (257)
.+++.+..+++.+++. +-.+..-++ +-..+.++.+.++..- +| .+.. -..-+..+.++||.
T Consensus 163 -~dpevleaALea~a~~~plI~sat~dn~e~m~~lAa~y~~pVi~~--~~-dl~~----lkelv~~a~~~GI~ 227 (446)
T 4djd_C 163 -DDPDVLKEALAGVADRKPLLYAATGANYEAMTALAKENNCPLAVY--GN-GLEE----LAELVDKIVALGHK 227 (446)
T ss_dssp -SCHHHHHHHHGGGGGGCCEEEEECTTTHHHHHHHHHHTTCCEEEE--CS-SHHH----HHHHHHHHHHTTCC
T ss_pred -CCHHHHHHHHHhhcCcCCeeEecchhhHHHHHHHHHHcCCcEEEE--ec-cHHH----HHHHHHHHHHCCCC
Confidence 4677778888866542 444444333 4567778889887653 22 1111 11135667788883
No 333
>4dhx_B Enhancer of yellow 2 transcription factor homolog, 80 kDa MCM3-associated protein; mRNA export, transport protein-DNA binding protein complex; 2.10A {Homo sapiens}
Probab=22.94 E-value=2e+02 Score=20.23 Aligned_cols=49 Identities=6% Similarity=0.005 Sum_probs=34.3
Q ss_pred hHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhh
Q 025169 205 VSREYDLAASA-------FSLGRREMFQLAKSAVKFIFANGRVKEDLKEIFDLAEKK 254 (257)
Q Consensus 205 l~~E~~~a~~~-------~~ls~~~v~~~~~n~~~~~~~~~~~k~~l~~~~~~~~~~ 254 (257)
..++++..++. -+++.++++.-..=-++.+ +|++.|.+++.++..+..+
T Consensus 42 W~Devr~~~r~~i~~~g~~~vt~~~L~~~I~P~Ar~~-VP~~VK~Ell~rIr~fL~~ 97 (101)
T 4dhx_B 42 WKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRAL-VPDSVKKELLQRIRTFLAQ 97 (101)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhHHHHHH-CCHHHHHHHHHHHHHHHHH
Confidence 45666555543 2578888877655444444 7999999999999887643
No 334
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=22.90 E-value=2.1e+02 Score=22.78 Aligned_cols=77 Identities=9% Similarity=-0.028 Sum_probs=42.2
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEE-eecccccHHHHHHHhcCCCcEE
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI-GHACCFEEEEWRKLKSSKIPVE 161 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri-~Hg~~l~~~~~~~l~~~~i~v~ 161 (257)
..+|+-+......+....+..+-+.|+++|..+.+...+...... .. ++++-| .-+...+++.++.+.+.+++++
T Consensus 9 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~-~~---~~vdgiI~~~~~~~~~~~~~l~~~~iPvV 84 (277)
T 3cs3_A 9 NIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKSHLFI-PE---KMVDGAIILDWTFPTKEIEKFAERGHSIV 84 (277)
T ss_dssp CEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTTTTTCC-CT---TTCSEEEEECTTSCHHHHHHHHHTTCEEE
T ss_pred cEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCCCHHHH-hh---ccccEEEEecCCCCHHHHHHHHhcCCCEE
Confidence 356665432222222345556667778889888776543321111 01 266643 3333345566788888899887
Q ss_pred ec
Q 025169 162 IC 163 (257)
Q Consensus 162 ~c 163 (257)
..
T Consensus 85 ~~ 86 (277)
T 3cs3_A 85 VL 86 (277)
T ss_dssp ES
T ss_pred EE
Confidence 64
No 335
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=22.86 E-value=1.5e+02 Score=24.80 Aligned_cols=13 Identities=8% Similarity=0.003 Sum_probs=6.5
Q ss_pred ccccHHHHHHHhc
Q 025169 143 CCFEEEEWRKLKS 155 (257)
Q Consensus 143 ~~l~~~~~~~l~~ 155 (257)
+.++++.+..|++
T Consensus 140 ~~l~~~~~~~La~ 152 (292)
T 2vc6_A 140 IEIHVETLARIFE 152 (292)
T ss_dssp CCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHh
Confidence 3445555555543
No 336
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=22.81 E-value=2.4e+02 Score=23.26 Aligned_cols=81 Identities=15% Similarity=0.097 Sum_probs=45.8
Q ss_pred ceEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHh---hHHHHHhcCCcE-EeecccccHHHHHHHhcCCC
Q 025169 83 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKE---EIQSMLDFLPQR-IGHACCFEEEEWRKLKSSKI 158 (257)
Q Consensus 83 ~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~---~i~~~l~lg~~r-i~Hg~~l~~~~~~~l~~~~i 158 (257)
..+|+-+......+-...+..+-+.++++|..+.+......... .+...+..+++- |..+...+++.++.+.+.++
T Consensus 64 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~~~~i 143 (332)
T 2o20_A 64 TTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRT 143 (332)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSCCCHHHHHHHHHHCC
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHhCCC
Confidence 36676543211111224455666778889998887654332111 122333457775 34444445677888888899
Q ss_pred cEEec
Q 025169 159 PVEIC 163 (257)
Q Consensus 159 ~v~~c 163 (257)
+++..
T Consensus 144 PvV~~ 148 (332)
T 2o20_A 144 PVVLV 148 (332)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98764
No 337
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=22.76 E-value=45 Score=24.83 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=31.9
Q ss_pred HhhHHHHHhcCCcE--Eeecc---cccHHHHHHHhcCCCcEEecccccc
Q 025169 125 KEEIQSMLDFLPQR--IGHAC---CFEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 125 ~~~i~~~l~lg~~r--i~Hg~---~l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
++++...+...++. ||-|- .++++..+.|.++||.+++.+|.|.
T Consensus 54 ~e~l~~ll~~~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~m~T~aA 102 (132)
T 2gm2_A 54 PAHMDAVLALNPAVILLGTGERQQFPSTDVLAACLTRGIGLEAMTNAAA 102 (132)
T ss_dssp TTTSHHHHHHCCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEEECHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEEeCHHHH
Confidence 34445555566764 55553 4589999999999999999888764
No 338
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=22.75 E-value=3.6e+02 Score=23.01 Aligned_cols=130 Identities=11% Similarity=0.028 Sum_probs=73.2
Q ss_pred hcHHHHHHHHHHcCCceeeecCC---CC--CHhhH----HHHHhcCCcEEeecc---cccHHH----HHHHhcC--CCcE
Q 025169 99 TTFLPALKFAREQGLQITLHCGE---IP--NKEEI----QSMLDFLPQRIGHAC---CFEEEE----WRKLKSS--KIPV 160 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E---~~--~~~~i----~~~l~lg~~ri~Hg~---~l~~~~----~~~l~~~--~i~v 160 (257)
+.+.++++.|++.|+.+.+.+.- .. +++.+ +.+.++|+++|.=+= .++|.+ ++.+++. ++++
T Consensus 137 ~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i 216 (337)
T 3ble_A 137 TDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHF 216 (337)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeE
Confidence 45677889999999999887632 10 12222 344457998875432 235544 4444432 4555
Q ss_pred EecccccceeccccCCCcccHHHHHhcCCCEEecCCCCCCC--CCChHHHHHHHHHhC-----CCCHHHHHHHHHHHHHH
Q 025169 161 EICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCTDDSGVF--STSVSREYDLAASAF-----SLGRREMFQLAKSAVKF 233 (257)
Q Consensus 161 ~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~--~~~l~~E~~~a~~~~-----~ls~~~v~~~~~n~~~~ 233 (257)
.+-.-.+.-+ +.......+++|+...=+|=++..- +.--++++..+.... |++.+.+.++++.-.+.
T Consensus 217 ~~H~Hnd~Gl------A~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~~g~~tgidl~~L~~~~~~v~~~ 290 (337)
T 3ble_A 217 EFHGHNDYDL------SVANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDKSNSKTNINEIAITEASRLVEVF 290 (337)
T ss_dssp EEECBCTTSC------HHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHHSSCCCCCCGGGHHHHHHHHHHH
T ss_pred EEEecCCcch------HHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence 5444444433 3355677889999987777653222 222346655554332 45667777766544333
Q ss_pred c
Q 025169 234 I 234 (257)
Q Consensus 234 ~ 234 (257)
+
T Consensus 291 ~ 291 (337)
T 3ble_A 291 S 291 (337)
T ss_dssp H
T ss_pred H
Confidence 3
No 339
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=22.63 E-value=1.7e+02 Score=22.07 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=27.1
Q ss_pred eccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHH
Q 025169 88 DLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSML 132 (257)
Q Consensus 88 ~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l 132 (257)
.+.|.|+...++.+.++++.+++.|+++.+...-+..++.+....
T Consensus 8 ~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~ 52 (182)
T 3can_A 8 TFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVM 52 (182)
T ss_dssp EECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHH
T ss_pred EEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHH
Confidence 345555555555557888889988888877754332333333333
No 340
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=22.58 E-value=2.5e+02 Score=23.30 Aligned_cols=22 Identities=23% Similarity=0.190 Sum_probs=15.4
Q ss_pred CChHHHHHHHHHHHHHHhhcCC
Q 025169 236 ANGRVKEDLKEIFDLAEKKLDL 257 (257)
Q Consensus 236 ~~~~~k~~l~~~~~~~~~~~~~ 257 (257)
+++++++++.+.+.+..+++.|
T Consensus 265 l~~~~~~~l~~~l~~~~~~~~~ 286 (286)
T 2r91_A 265 LDPEEKAWLRAAVAKAKSQLRL 286 (286)
T ss_dssp CCHHHHHHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhcC
Confidence 4567778887777777776643
No 341
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=22.56 E-value=3.3e+02 Score=22.52 Aligned_cols=96 Identities=8% Similarity=0.029 Sum_probs=47.9
Q ss_pred hcHHHHHHHHHHcCCceeeec-CCCCCHhhHHHHHhcC--CcEEeecccccHHHHHHHhcCCCcEEecccccceec-ccc
Q 025169 99 TTFLPALKFAREQGLQITLHC-GEIPNKEEIQSMLDFL--PQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIRTE-TIS 174 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha-~E~~~~~~i~~~l~lg--~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~l~-~~~ 174 (257)
+.+.+++...++.+-.+.++. |.......+.... .+ ....-+|..-.++..++++...+. ++|+..-..+ ...
T Consensus 214 ~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~-~~~~~~v~~~g~~~~~~~~~~~~~ad~~--v~ps~~~~~~~~~e 290 (394)
T 3okp_A 214 DSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLA-TDVSQNVKFLGRLEYQDMINTLAAADIF--AMPARTRGGGLDVE 290 (394)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHT-GGGGGGEEEEESCCHHHHHHHHHHCSEE--EECCCCBGGGTBCC
T ss_pred HHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHH-hcccCeEEEcCCCCHHHHHHHHHhCCEE--EecCcccccccccc
Confidence 445555555554433333333 4332233444333 32 234445654345667778777654 4565431000 001
Q ss_pred CCCcccHHHHHhcCCCEEecCCCCC
Q 025169 175 SLDIHHFVDLYKAQHPLVLCTDDSG 199 (257)
Q Consensus 175 ~~~~~pi~~l~~~Gv~v~lgTD~~~ 199 (257)
.++ ..+.+.+..|+||.. ||.++
T Consensus 291 ~~~-~~~~Ea~a~G~PvI~-~~~~~ 313 (394)
T 3okp_A 291 GLG-IVYLEAQACGVPVIA-GTSGG 313 (394)
T ss_dssp SSC-HHHHHHHHTTCCEEE-CSSTT
T ss_pred ccC-cHHHHHHHcCCCEEE-eCCCC
Confidence 112 357789999999854 66543
No 342
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=22.52 E-value=97 Score=23.09 Aligned_cols=44 Identities=11% Similarity=0.173 Sum_probs=31.3
Q ss_pred HhhHHHHHhcC--CcE--Eeecc---cccHHHHHHHhcCCCcEEecccccc
Q 025169 125 KEEIQSMLDFL--PQR--IGHAC---CFEEEEWRKLKSSKIPVEICLTSNI 168 (257)
Q Consensus 125 ~~~i~~~l~lg--~~r--i~Hg~---~l~~~~~~~l~~~~i~v~~cP~SN~ 168 (257)
++++...+.+. ++. ||-|- .++++..+.|.++||.+++.+|.|.
T Consensus 55 ~e~l~~l~~~~p~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M~T~aA 105 (135)
T 2fvt_A 55 RYSLQRVFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGPA 105 (135)
T ss_dssp TTTTHHHHHTTTSCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEeCHHHH
Confidence 34455555555 554 55553 4589999999999999999888764
No 343
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=21.88 E-value=2.2e+02 Score=24.15 Aligned_cols=42 Identities=10% Similarity=0.012 Sum_probs=20.1
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCC---CCHHHHHHHHHHHHhh
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRR---ETTEAAMETVKLALEM 79 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~---~~~e~~~~~~~~~~~~ 79 (257)
+.+++.++-.-+.|+...++.+..-. .+.++-.+.++.+.+.
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 72 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKV 72 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 34444444333456665555444432 3455555555555544
No 344
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=21.59 E-value=3.6e+02 Score=22.66 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=34.6
Q ss_pred hhcHHHHHHHHHHcCCceeeecCCCCCHhhHHHHHhcCCcEEe
Q 025169 98 WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG 140 (257)
Q Consensus 98 ~~~~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~lg~~ri~ 140 (257)
.+.++++++..++.|++|.+-.. .+++.+..+.+.|+++|+
T Consensus 141 ~~~L~~~i~~L~~~GIrVSLFID--pd~~qI~aA~~~GAd~IE 181 (278)
T 3gk0_A 141 FDAVRAACKQLADAGVRVSLFID--PDEAQIRAAHETGAPVIE 181 (278)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEE
Confidence 46788999999999999999883 456778888889999986
No 345
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=21.53 E-value=2.5e+02 Score=22.59 Aligned_cols=65 Identities=11% Similarity=-0.019 Sum_probs=39.7
Q ss_pred hcHHHHHHHHHHcCCceeeecCCCCC-HhhHHHHH-hcCCcEE-eecccccHHHHHHHhcCCCcEEec
Q 025169 99 TTFLPALKFAREQGLQITLHCGEIPN-KEEIQSML-DFLPQRI-GHACCFEEEEWRKLKSSKIPVEIC 163 (257)
Q Consensus 99 ~~~~~~~~~A~~~gl~v~~Ha~E~~~-~~~i~~~l-~lg~~ri-~Hg~~l~~~~~~~l~~~~i~v~~c 163 (257)
..+..+-+.|+++|..+.+....... ...+.+.+ ..+++-+ .-+...+++.++.+.+.|++++..
T Consensus 27 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~ 94 (294)
T 3qk7_A 27 EMISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPEDFRLQYLQKQNFPFLAL 94 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSCHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHhCCCCEEEE
Confidence 45566667788899888877654311 12222333 3466653 333344557788899999998764
No 346
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=21.46 E-value=2.5e+02 Score=23.88 Aligned_cols=56 Identities=7% Similarity=0.033 Sum_probs=34.7
Q ss_pred hcCCcE-EeecccccHHHHHHHhcC--CCcEEecccccceeccccCCCcccHHHHHhcCCCEEecC
Q 025169 133 DFLPQR-IGHACCFEEEEWRKLKSS--KIPVEICLTSNIRTETISSLDIHHFVDLYKAQHPLVLCT 195 (257)
Q Consensus 133 ~lg~~r-i~Hg~~l~~~~~~~l~~~--~i~v~~cP~SN~~l~~~~~~~~~pi~~l~~~Gv~v~lgT 195 (257)
+.|+|- ..||.. ++++++.+.+. ++++.++.+.. +.. ...+..+|.+.|+++.+.-
T Consensus 181 eAGAD~ifi~g~~-~~~ei~~~~~~~~~~Pl~~n~~~~---g~~---p~~~~~eL~~lGv~~v~~~ 239 (302)
T 3fa4_A 181 DAGADVGFLEGIT-SREMARQVIQDLAGWPLLLNMVEH---GAT---PSISAAEAKEMGFRIIIFP 239 (302)
T ss_dssp TTTCSEEEETTCC-CHHHHHHHHHHTTTSCEEEECCTT---SSS---CCCCHHHHHHHTCSEEEET
T ss_pred HcCCCEEeecCCC-CHHHHHHHHHHhcCCceeEEEecC---CCC---CCCCHHHHHHcCCCEEEEc
Confidence 369985 578864 67788777653 45554333221 111 2346889999999987653
No 347
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=21.03 E-value=1.4e+02 Score=23.98 Aligned_cols=79 Identities=11% Similarity=-0.024 Sum_probs=46.2
Q ss_pred eEEEeccCCCCCCChhcHHHHHHHHHHcCCceeeecCCCC-CHh----hHHHHHhcCCcEEe-eccccc--HHHHHHHhc
Q 025169 84 VVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP-NKE----EIQSMLDFLPQRIG-HACCFE--EEEWRKLKS 155 (257)
Q Consensus 84 vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~Ha~E~~-~~~----~i~~~l~lg~~ri~-Hg~~l~--~~~~~~l~~ 155 (257)
.+|+-+......+-...+..+-+.|+++|..+.+...... +.. .+..++..+++-|. .+...+ .+.++.+.
T Consensus 7 ~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~- 85 (304)
T 3o1i_D 7 KICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWV- 85 (304)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHT-
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHc-
Confidence 5666543221112234456667778899999888776541 222 23344445777543 333333 45688888
Q ss_pred CCCcEEec
Q 025169 156 SKIPVEIC 163 (257)
Q Consensus 156 ~~i~v~~c 163 (257)
.|++++..
T Consensus 86 ~~iPvV~~ 93 (304)
T 3o1i_D 86 GNTPVFAT 93 (304)
T ss_dssp TTSCEEEC
T ss_pred CCCCEEEe
Confidence 99998765
No 348
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=20.98 E-value=3.4e+02 Score=22.12 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCceeeecCCCCCHhhHHHHHh-cCCcEEeecccccHHHHHHHhcCCCcEEecccccce----eccccC
Q 025169 101 FLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCFEEEEWRKLKSSKIPVEICLTSNIR----TETISS 175 (257)
Q Consensus 101 ~~~~~~~A~~~gl~v~~Ha~E~~~~~~i~~~l~-lg~~ri~Hg~~l~~~~~~~l~~~~i~v~~cP~SN~~----l~~~~~ 175 (257)
+..+++.++..++.+.+ +|.....+.+.+... ++....-+|..-+++..++++...+. +.|+.... -+...+
T Consensus 177 ~~~li~a~~~~~~~l~i-~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~--v~ps~~~~~~~~~~~~E~ 253 (342)
T 2iuy_A 177 ALEAAAFAHACGRRLVL-AGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAV--LAMSQAVTGPWGGIWCEP 253 (342)
T ss_dssp HHHHHHHHHHHTCCEEE-ESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEE--EECCCCCCCTTCSCCCCC
T ss_pred HHHHHHHHHhcCcEEEE-EeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEE--EECCcccccccccccccC
Confidence 44455555555666555 354433444444332 45333345554455667888887764 45644100 000111
Q ss_pred CCcccHHHHHhcCCCEEecCCCC
Q 025169 176 LDIHHFVDLYKAQHPLVLCTDDS 198 (257)
Q Consensus 176 ~~~~pi~~l~~~Gv~v~lgTD~~ 198 (257)
++ ..+.+.+..|+|| |+||.+
T Consensus 254 ~~-~~~~EAma~G~Pv-I~s~~~ 274 (342)
T 2iuy_A 254 GA-TVVSEAAVSGTPV-VGTGNG 274 (342)
T ss_dssp CC-HHHHHHHHTTCCE-EECCTT
T ss_pred cc-HHHHHHHhcCCCE-EEcCCC
Confidence 12 3578899999988 566754
No 349
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=20.90 E-value=3.1e+02 Score=24.74 Aligned_cols=63 Identities=13% Similarity=0.057 Sum_probs=43.8
Q ss_pred hcHHH---HHHHHHH------cCCceeeecCCCCCHhhHHHHHh--cCCcE-Ee--ecccccHHHHHHHhcCCCcEEecc
Q 025169 99 TTFLP---ALKFARE------QGLQITLHCGEIPNKEEIQSMLD--FLPQR-IG--HACCFEEEEWRKLKSSKIPVEICL 164 (257)
Q Consensus 99 ~~~~~---~~~~A~~------~gl~v~~Ha~E~~~~~~i~~~l~--lg~~r-i~--Hg~~l~~~~~~~l~~~~i~v~~cP 164 (257)
+++++ +++..++ .++++.+-. ..++-++.+++ .|++. |- -| ..+++.++.+++.|++++++.
T Consensus 247 EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT---~~~~VaeaAL~~~aGa~i~INDVsg-~~d~~m~~v~a~~g~~vVlMh 322 (442)
T 3mcm_A 247 EEFNKLNEFLEYFKSQLANLIYKPLVSIDT---RKLEVMQKILAKHHDIIWMINDVEC-NNIEQKAQLIAKYNKKYVIIH 322 (442)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSSCCEEEEEC---CCHHHHHHHHHHHGGGCCEEEECCC-TTHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeEEEeC---CCHHHHHHHHhhCCCCCEEEEcCCC-CCChHHHHHHHHhCCeEEEEC
Confidence 45555 4565555 278888765 45667788888 78877 52 34 346778899999999988765
Q ss_pred c
Q 025169 165 T 165 (257)
Q Consensus 165 ~ 165 (257)
.
T Consensus 323 ~ 323 (442)
T 3mcm_A 323 N 323 (442)
T ss_dssp C
T ss_pred C
Confidence 4
No 350
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=20.85 E-value=2.8e+02 Score=24.55 Aligned_cols=87 Identities=10% Similarity=-0.008 Sum_probs=47.9
Q ss_pred CCCchhhhhhHhhcccCCCc---EEEEEEEeeCC--CCHHHHHHHHHHHHhhCCC-ceEEEecc-CCCCC-CChhcHHHH
Q 025169 33 RPVNTKNMNDACNGTRGKKI---YVRLLLSIDRR--ETTEAAMETVKLALEMRDL-GVVGIDLS-GNPTK-GEWTTFLPA 104 (257)
Q Consensus 33 ~~~~~~~~~~~~~a~~~~gi---r~~li~~~~r~--~~~e~~~~~~~~~~~~~~~-~vvg~~l~-g~~~~-~~~~~~~~~ 104 (257)
+.+++++++.+.+...+.|. ++.+=+.+.+. .+++++.+..+++...... .++-+... +..+. .+++.+.+.
T Consensus 251 ~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ps~e~i~~f 330 (404)
T 3rfa_A 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRF 330 (404)
T ss_dssp TSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCBCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCCCCHHHHHHH
Confidence 45566666655444444555 55444444543 2467777777766543211 01111111 11111 245778888
Q ss_pred HHHHHHcCCceeeec
Q 025169 105 LKFAREQGLQITLHC 119 (257)
Q Consensus 105 ~~~A~~~gl~v~~Ha 119 (257)
.+.++++|+.+++--
T Consensus 331 ~~iL~~~Gi~vtiR~ 345 (404)
T 3rfa_A 331 SKVLMSYGFTTIVRK 345 (404)
T ss_dssp HHHHHHTTCEEEECC
T ss_pred HHHHHHcCCcEEEcC
Confidence 888999999999875
No 351
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.34 E-value=3e+02 Score=22.21 Aligned_cols=71 Identities=11% Similarity=0.025 Sum_probs=32.9
Q ss_pred hhhhhHhhcccCCCcEEEEEEEeeCCCCHHHHHHHHHHHHhhCCCceEEEeccCCCCCCChhcHHHHHHHHHHcCCceee
Q 025169 38 KNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITL 117 (257)
Q Consensus 38 ~~~~~~~~a~~~~gir~~li~~~~r~~~~e~~~~~~~~~~~~~~~~vvg~~l~g~~~~~~~~~~~~~~~~A~~~gl~v~~ 117 (257)
+.++.+.+++++.|+...+..+ ..+++...+.++.....+-++++- .+. ++..+.+.++.+++.|+|+.+
T Consensus 19 ~~~~gi~~~a~~~g~~~~~~~~---~~~~~~~~~~i~~l~~~~vdgiIi---~~~----~~~~~~~~~~~~~~~~iPvV~ 88 (313)
T 3m9w_A 19 KDRDIFVKKAESLGAKVFVQSA---NGNEETQMSQIENMINRGVDVLVI---IPY----NGQVLSNVVKEAKQEGIKVLA 88 (313)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEC---TTCHHHHHHHHHHHHHTTCSEEEE---ECS----STTSCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEECC---CCCHHHHHHHHHHHHHcCCCEEEE---eCC----ChhhhHHHHHHHHHCCCeEEE
Confidence 3444444555666766554422 234444444555444433333332 221 112234455556666777655
Q ss_pred e
Q 025169 118 H 118 (257)
Q Consensus 118 H 118 (257)
-
T Consensus 89 ~ 89 (313)
T 3m9w_A 89 Y 89 (313)
T ss_dssp E
T ss_pred E
Confidence 3
Done!