Query 025171
Match_columns 257
No_of_seqs 204 out of 1656
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 05:06:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 2.4E-37 8.2E-42 301.5 14.7 172 30-210 19-196 (553)
2 1xff_A D-fructose-6-, glucosam 100.0 1.9E-31 6.6E-36 234.4 19.4 170 30-206 15-224 (240)
3 1ao0_A Glutamine phosphoribosy 100.0 8.7E-32 3E-36 256.9 18.1 172 30-207 15-230 (459)
4 1ecf_A Glutamine phosphoribosy 100.0 1.2E-28 4.1E-33 237.8 21.7 170 30-200 15-236 (504)
5 2bpl_A Glucosamine--fructose-6 100.0 3.4E-28 1.2E-32 239.2 18.7 170 30-206 15-224 (608)
6 1jgt_A Beta-lactam synthetase; 100.0 4.6E-28 1.6E-32 234.2 13.4 131 69-209 57-212 (513)
7 1q15_A CARA; CMPR, (2S,5S)-5-c 99.9 1.5E-27 5.2E-32 230.1 7.9 146 53-209 26-207 (503)
8 3mdn_A Glutamine aminotransfer 99.9 3.8E-23 1.3E-27 185.3 12.8 143 53-205 81-256 (274)
9 1te5_A Conserved hypothetical 99.7 1.8E-18 6.2E-23 153.4 6.3 143 53-202 71-252 (257)
10 1ea0_A Glutamate synthase [NAD 99.6 6.1E-16 2.1E-20 162.2 13.1 137 53-197 202-393 (1479)
11 1ofd_A Ferredoxin-dependent gl 99.6 2.4E-15 8.2E-20 158.1 13.6 137 53-197 198-392 (1520)
12 1vk9_A Conserved hypothetical 26.7 9.7 0.00033 30.5 -0.9 27 132-161 27-53 (151)
13 2xn6_B Thyroxine-binding globu 23.8 1.1E+02 0.0038 17.7 3.8 20 131-150 7-27 (35)
14 2riv_B Thyroxine-binding globu 23.4 1.1E+02 0.0037 18.3 3.8 21 131-151 12-33 (40)
15 1hle_B Horse leukocyte elastas 21.4 1.2E+02 0.004 16.9 3.8 20 131-150 6-26 (31)
16 4afx_B Protein Z dependent pro 21.0 1.2E+02 0.0041 17.6 3.5 21 131-151 8-29 (36)
17 2h4p_B MENT, heterochromatin-a 21.0 1.3E+02 0.0044 17.2 3.8 15 132-146 8-22 (34)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=2.4e-37 Score=301.53 Aligned_cols=172 Identities=21% Similarity=0.352 Sum_probs=152.8
Q ss_pred CHHHHHHHHHhcCCCCccceEecCcEEEEEecCC--CCCCCCCCeEecCCcEEEEEEeEEeehhhHHHHhC---CCCCCC
Q 025171 30 HPEEIFNEFLISQSSNAFSINFGNAAALAYVPPE--NPNSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQYG---LSKGSN 104 (257)
Q Consensus 30 ~~~~m~~~~~~RGPd~~~~~~~~~~~~lg~~rl~--~~~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~---~~~s~~ 104 (257)
.+.+|+++|.|||||+++ ++..++++|||+||+ ++..+.||+.+.+++++++|||+|||+.+||++|. .+.+.+
T Consensus 19 ~~~~m~~~l~hRGpD~~G-~~~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~s 97 (553)
T 1ct9_A 19 KALELSRLMRHRGPDWSG-IYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGS 97 (553)
T ss_dssp HHHHHHHTTGGGCBTEEE-EEECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSCC
T ss_pred HHHHHHHHHhccCCCccc-EEEECCEEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCCC
Confidence 467899999999999998 888888999999998 44468999988878899999999999999999985 378999
Q ss_pred HHHHHHHHHHHHHhcCCchHHHhhcccccceEEEEEEcCCCEEEEEEcCCCCeEEEEEEeCCCeEEEEecchhhHhhcCC
Q 025171 105 EAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCKAGTIFAALDADEGVRLFWGIAADGSVVISDNLELIKASCAK 184 (257)
Q Consensus 105 D~evll~~y~~~~~~G~~~~~~~l~~L~G~FAfvi~D~~~~~l~~aRD~~G~rPLyyg~~~~g~l~fASe~~aL~~~~~~ 184 (257)
|+|+|+++|+ ++|. +++++|+|+|||+|||..+++|+++||++|+|||||+...++.++||||+++|...+ +
T Consensus 98 DtEvil~l~~---~~g~----~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~~-~ 169 (553)
T 1ct9_A 98 DCEVILALYQ---EKGP----EFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-R 169 (553)
T ss_dssp TTHHHHHHHH---HHTT----TTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTTC-S
T ss_pred cHHHHHHHHH---HHHH----HHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhhc-C
Confidence 9999999999 7886 899999999999999998899999999999999999985457899999999998766 5
Q ss_pred ceEEeCCCeEEEeC-CceEEEecCCCc
Q 025171 185 SFAPFPAGCMFHSE-QGLMSFEHPTRE 210 (257)
Q Consensus 185 ~i~~~ppG~~~~~~-~g~~~~~~~~~~ 210 (257)
.|..+||||++..+ +.+.+||.+.+.
T Consensus 170 ~i~~l~pG~~~~~~~g~~~~yw~~~~~ 196 (553)
T 1ct9_A 170 TIKEFPAGSYLWSQDGEIRSYYHRDWF 196 (553)
T ss_dssp EEEECCTTEEEETTTCSEEECCCCGGG
T ss_pred CEEEECCCeEEEEcCCcEEEeecCCcc
Confidence 69999999998764 348889887654
No 2
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=99.98 E-value=1.9e-31 Score=234.38 Aligned_cols=170 Identities=13% Similarity=0.143 Sum_probs=139.6
Q ss_pred CHHHHHHHHHhcCCCCccceEe---------------------------cCcEEEEEecCC--CC--CCCCCCeEecCCc
Q 025171 30 HPEEIFNEFLISQSSNAFSINF---------------------------GNAAALAYVPPE--NP--NSVSQRWFCGLHN 78 (257)
Q Consensus 30 ~~~~m~~~~~~RGPd~~~~~~~---------------------------~~~~~lg~~rl~--~~--~~~~QP~~~~~~~ 78 (257)
.+..|++.|.|||||+.+..+. .++++|||+|++ +. ..+.||+.. ++
T Consensus 15 ~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~--~~ 92 (240)
T 1xff_A 15 ILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS--EH 92 (240)
T ss_dssp HHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESCHHHHHHHHHHSCCCCSEEEEEEECCSSSCSSTTTSSCEEE--TT
T ss_pred HHHHHHHHHHhcCCCcCCEEEEecCCcEEEEEcCCcHHHHHhhhhcccCCccEEEEEEeccCCCCCCcccCCCccc--CC
Confidence 5678999999999998884314 367899999998 22 368999976 68
Q ss_pred EEEEEEeEEeehhhHHHHhC----CCCCCCHHHHHHHHHHHHHhcCCch---HHHhhcccccceEEEEEEcC-CCEEEEE
Q 025171 79 VYCMFMGSLNNLSSLNKQYG----LSKGSNEAMFVIEAYRTLRDRGPYP---AHQVLRDLDGSFGFVLYDCK-AGTIFAA 150 (257)
Q Consensus 79 ~~lv~nGeI~N~~eL~~~l~----~~~s~~D~evll~~y~~~~~~G~~~---~~~~l~~L~G~FAfvi~D~~-~~~l~~a 150 (257)
++++|||+|||+.+||++|. .+.+.+|+|+++++|+.+...|... +.+++++|+|+|||++||.. .++|+++
T Consensus 93 ~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~g~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l~~~ 172 (240)
T 1xff_A 93 IVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAA 172 (240)
T ss_dssp EEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHHHHHHHHHHHTSSCHHHHHHHHGGGCCEEEEEEEEETTCTTCEEEE
T ss_pred EEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcccceEEEEEecCCCCEEEEE
Confidence 99999999999999999884 3789999999999998532224321 24799999999999999975 6899999
Q ss_pred EcCCCCeEEEEEEeCCCeEEEEecchhhHhhcCCceEEeCCCeEEEe-CCceEEEec
Q 025171 151 LDADEGVRLFWGIAADGSVVISDNLELIKASCAKSFAPFPAGCMFHS-EQGLMSFEH 206 (257)
Q Consensus 151 RD~~G~rPLyyg~~~~g~l~fASe~~aL~~~~~~~i~~~ppG~~~~~-~~g~~~~~~ 206 (257)
||+ |||||+.. ++.++||||.++|...+.+ +.++|||+++.. .++++.|..
T Consensus 173 Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~~-~~~l~pG~~~~i~~~~~~~~~~ 224 (240)
T 1xff_A 173 RSG---SPLVIGLG-MGENFIASDQLALLPVTRR-FIFLEEGDIAEITRRSVNIFDK 224 (240)
T ss_dssp EEB---SCCEEEEC-SSCEEEESSGGGTTTTCSE-EEECCTTCEEEECSSCEEEECT
T ss_pred ECC---CceEEEEe-CCEEEEEECHHHHHhhCCe-EEEECCCEEEEEECCeEEEEeC
Confidence 997 99999997 5789999999999877754 899999999765 566777654
No 3
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.98 E-value=8.7e-32 Score=256.95 Aligned_cols=172 Identities=15% Similarity=0.173 Sum_probs=141.6
Q ss_pred CHHHHHHHHHhcCCCCccceEec--------------------------CcEEEEEecCC--CC--CCCCCCeEe---cC
Q 025171 30 HPEEIFNEFLISQSSNAFSINFG--------------------------NAAALAYVPPE--NP--NSVSQRWFC---GL 76 (257)
Q Consensus 30 ~~~~m~~~~~~RGPd~~~~~~~~--------------------------~~~~lg~~rl~--~~--~~~~QP~~~---~~ 76 (257)
....|+.+|.|||||+.+....+ ++++|||+|++ +. ..+.||+.. .+
T Consensus 15 ~~~~~l~~L~hRG~D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~~l~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~~~ 94 (459)
T 1ao0_A 15 ITYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNN 94 (459)
T ss_dssp HHHHHHHHTGGGCCSEEEEEEECSSCEEEEEEESCHHHHTTSSCTTTCCBSEEEEEEECCC----CGGGSSSEEEBCTTT
T ss_pred HHHHHHHHHHhcCCCcCCEEEEeCCeEEEEecCCcHhhhcchhhhhccCCCEEEEEEecCCCCCCCccCCCCceeccCCC
Confidence 34589999999999988843332 56899999998 22 258999986 45
Q ss_pred CcEEEEEEeEEeehhhHHHHhC----CCCCCCHHHHHHHHHHHHHhcCCc----hHHHhhcccccceEEEEEEcCCCEEE
Q 025171 77 HNVYCMFMGSLNNLSSLNKQYG----LSKGSNEAMFVIEAYRTLRDRGPY----PAHQVLRDLDGSFGFVLYDCKAGTIF 148 (257)
Q Consensus 77 ~~~~lv~nGeI~N~~eL~~~l~----~~~s~~D~evll~~y~~~~~~G~~----~~~~~l~~L~G~FAfvi~D~~~~~l~ 148 (257)
++++++|||+|+|+.+||++|. .+.+.+|+|+|+++|. +++.. .+.+++++|+|+|||++|| .++|+
T Consensus 95 g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi~~l~~---~~~~~~~~~a~~~~~~~l~G~fa~~i~d--~~~l~ 169 (459)
T 1ao0_A 95 GSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIK---RSGHFTLKDQIKNSLSMLKGAYAFLIMT--ETEMI 169 (459)
T ss_dssp CCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHHHHHHH---TCCCSSHHHHHHHHHTTCCEEEEEEEEC--SSEEE
T ss_pred CcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHHHHHHH---HhccCCHHHHHHHHHHhhccceEEEEEe--CCEEE
Confidence 7799999999999999999984 3789999999999998 66521 1258999999999999999 57999
Q ss_pred EEEcCCCCeEEEEEEeCCCeEEEEecchhhHhhcCCceEEeCCCeEEEe-CCceE--EEecC
Q 025171 149 AALDADEGVRLFWGIAADGSVVISDNLELIKASCAKSFAPFPAGCMFHS-EQGLM--SFEHP 207 (257)
Q Consensus 149 ~aRD~~G~rPLyyg~~~~g~l~fASe~~aL~~~~~~~i~~~ppG~~~~~-~~g~~--~~~~~ 207 (257)
++||++|+|||||+.. ++.++||||.++|.....+.+.++|||+++.. .+|++ .||.+
T Consensus 170 ~~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~~~~~~~~~~~~~ 230 (459)
T 1ao0_A 170 VALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDEGMKSERFSMN 230 (459)
T ss_dssp EEECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTEEEEEESCSS
T ss_pred EEECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEECCceEEEecCCC
Confidence 9999999999999998 57899999999998865567999999999754 66754 45443
No 4
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.96 E-value=1.2e-28 Score=237.79 Aligned_cols=170 Identities=12% Similarity=0.097 Sum_probs=137.4
Q ss_pred CHHHHHHHHHhcCCCCccceEec---------------------------CcEEEEEecCC--CC--CCCCCCeEecC-C
Q 025171 30 HPEEIFNEFLISQSSNAFSINFG---------------------------NAAALAYVPPE--NP--NSVSQRWFCGL-H 77 (257)
Q Consensus 30 ~~~~m~~~~~~RGPd~~~~~~~~---------------------------~~~~lg~~rl~--~~--~~~~QP~~~~~-~ 77 (257)
.+..|+..|.|||||+.+....+ ++++|||+||+ +. ..+.||++... .
T Consensus 15 ~l~~~l~~LqhRG~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~~~~l~g~~~igH~R~sT~G~~~~~n~QP~~~~~~~ 94 (504)
T 1ecf_A 15 SIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPY 94 (504)
T ss_dssp HHHHHHHHTGGGCCSEEEEEEECTTSCEEEEEEESCHHHHCCHHHHHHCCSSEEEEEEECCBTTBCTTSCCSCEEECSSS
T ss_pred HHHHHHHHHHhcCCCcceEEEEcCCCcEEEEecCCchhhhcCccccccCCCCEEEEEEccCcCCCCCccccCCeEeccCC
Confidence 46789999999999988844333 46899999998 22 26899997643 5
Q ss_pred cEEEEEEeEEeehhhHHHHhC-----CCCCCCHHHHHHHHHHHHH-hcCC---------chHHHhhcccccceEEEEEEc
Q 025171 78 NVYCMFMGSLNNLSSLNKQYG-----LSKGSNEAMFVIEAYRTLR-DRGP---------YPAHQVLRDLDGSFGFVLYDC 142 (257)
Q Consensus 78 ~~~lv~nGeI~N~~eL~~~l~-----~~~s~~D~evll~~y~~~~-~~G~---------~~~~~~l~~L~G~FAfvi~D~ 142 (257)
+++++|||+|+|+.+||++|. .+.+.+|+|+|+++|.... ++|. ..+.+++++|+|+|||++|+.
T Consensus 95 ~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l~G~fa~v~~~~ 174 (504)
T 1ecf_A 95 GITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMII 174 (504)
T ss_dssp CEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHCCEEEEEEEEET
T ss_pred CEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHhccccccccccHHHHHHHhhhhcCccceEEEEEc
Confidence 699999999999999999873 3789999999999997432 2342 012478999999999999975
Q ss_pred CCCEEEEEEcCCCCeEEEEEEeC--C--CeEEEEecchhhHhhcCCceEEeCCCeEEE-eCCc
Q 025171 143 KAGTIFAALDADEGVRLFWGIAA--D--GSVVISDNLELIKASCAKSFAPFPAGCMFH-SEQG 200 (257)
Q Consensus 143 ~~~~l~~aRD~~G~rPLyyg~~~--~--g~l~fASe~~aL~~~~~~~i~~~ppG~~~~-~~~g 200 (257)
.++|+++|||+|+|||||+... + +.++||||.++|.....+.+.+++||+++. +.+|
T Consensus 175 -~~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l~PGe~v~i~~~g 236 (504)
T 1ecf_A 175 -GHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEG 236 (504)
T ss_dssp -TTEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTC
T ss_pred -CCeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEECCCCeEEEEeCCC
Confidence 4589999999999999999872 3 379999999999887667799999999964 4566
No 5
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.96 E-value=3.4e-28 Score=239.25 Aligned_cols=170 Identities=13% Similarity=0.147 Sum_probs=140.8
Q ss_pred CHHHHHHHHHhcCCCCccceEe---------------------------cCcEEEEEecCC--CC--CCCCCCeEecCCc
Q 025171 30 HPEEIFNEFLISQSSNAFSINF---------------------------GNAAALAYVPPE--NP--NSVSQRWFCGLHN 78 (257)
Q Consensus 30 ~~~~m~~~~~~RGPd~~~~~~~---------------------------~~~~~lg~~rl~--~~--~~~~QP~~~~~~~ 78 (257)
.+..|++.|.|||||+.+.... .++++|||+|++ +. ..+.||+.+ ++
T Consensus 15 ~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~l~~~l~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~--~~ 92 (608)
T 2bpl_A 15 ILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS--EH 92 (608)
T ss_dssp HHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESSHHHHHHHHHHSCCCCSEEEEEEECCCSSSCCGGGCSCEEE--TT
T ss_pred HHHHHHHHHHhcCCCcCceEEEecCCcEEEEeCCCcHHHHHHHhhccCCCCCEEEEEEccCCCCCCCccCCCCccC--CC
Confidence 5688999999999998884333 156899999998 22 257899977 77
Q ss_pred EEEEEEeEEeehhhHHHHhC----CCCCCCHHHHHHHHHHHHHhcCCc---hHHHhhcccccceEEEEEEcCC-CEEEEE
Q 025171 79 VYCMFMGSLNNLSSLNKQYG----LSKGSNEAMFVIEAYRTLRDRGPY---PAHQVLRDLDGSFGFVLYDCKA-GTIFAA 150 (257)
Q Consensus 79 ~~lv~nGeI~N~~eL~~~l~----~~~s~~D~evll~~y~~~~~~G~~---~~~~~l~~L~G~FAfvi~D~~~-~~l~~a 150 (257)
++++|||+|+|+.+||++|. .|.+.+|+|+|+++|+.+.++|.. .+.+++++|+|+|||++||... ++|+++
T Consensus 93 ~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi~~l~~~~~~~g~~~~~av~~~~~~l~G~fa~~i~d~~~~~~l~~a 172 (608)
T 2bpl_A 93 IVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAA 172 (608)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHHHHHHHHHHTTCCCHHHHHHHHGGGCCSSEEEEEEETTCTTCEEEE
T ss_pred EEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcCceEEEEEecCCCCEEEEE
Confidence 99999999999999999884 488999999999999854334642 2347999999999999999887 899999
Q ss_pred EcCCCCeEEEEEEeCCCeEEEEecchhhHhhcCCceEEeCCCeEEEe-CCceEEEec
Q 025171 151 LDADEGVRLFWGIAADGSVVISDNLELIKASCAKSFAPFPAGCMFHS-EQGLMSFEH 206 (257)
Q Consensus 151 RD~~G~rPLyyg~~~~g~l~fASe~~aL~~~~~~~i~~~ppG~~~~~-~~g~~~~~~ 206 (257)
||+ |||||+.. ++.++||||.++|...+ +.+..++||+++.. .+|+..+..
T Consensus 173 Rd~---~PL~~g~~-~~~~~~aSe~~al~~~~-~~~~~l~~G~i~~i~~~~~~~~~~ 224 (608)
T 2bpl_A 173 RSG---SPLVIGLG-MGENFIASDQLALLPVT-RRFIFLEEGDIAEITRRSVNIFDK 224 (608)
T ss_dssp EEB---SCCEEEEC-SSCEEEESSGGGTTTTC-CEEEECCTTCEEEECSSCEEEECS
T ss_pred ECC---CceEEEEe-CCeEEEEechHHHHhcC-CeEEEECCCeEEEEECCeEEEEeC
Confidence 997 99999997 57899999999998876 45899999999754 667776653
No 6
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.95 E-value=4.6e-28 Score=234.21 Aligned_cols=131 Identities=17% Similarity=0.169 Sum_probs=112.1
Q ss_pred CCCeEecC----CcEEEEEEeEEeehhhHHHHhC-CCCCCCHHHHHHHHHHHHHhcCCchHHHhhcccccceEEEEEEcC
Q 025171 69 SQRWFCGL----HNVYCMFMGSLNNLSSLNKQYG-LSKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (257)
Q Consensus 69 ~QP~~~~~----~~~~lv~nGeI~N~~eL~~~l~-~~~s~~D~evll~~y~~~~~~G~~~~~~~l~~L~G~FAfvi~D~~ 143 (257)
.||+...+ ++++++|||+|||+.+||++|. .+.+.+|+|+|+++|+ +||. +++++|+|+|||+|||..
T Consensus 57 ~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEvil~l~~---~~g~----~~~~~l~G~fA~~i~d~~ 129 (513)
T 1jgt_A 57 APDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAELVLRLLE---RYDL----HAFRLVNGRFATVVRTGD 129 (513)
T ss_dssp CGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHHHHHHHH---HHGG----GGGGTCCEEEEEEEEETT
T ss_pred CCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHHHHHHHH---HHhH----HhHhhcCeeEEEEEEECC
Confidence 68886554 7899999999999999999985 3789999999999999 7885 899999999999999964
Q ss_pred CCEEEEEEcCCCCeEEEEEEeCCCeEEEEecchhhHhhc---------------CCceEEeCCCeEEEe---CCce--EE
Q 025171 144 AGTIFAALDADEGVRLFWGIAADGSVVISDNLELIKASC---------------AKSFAPFPAGCMFHS---EQGL--MS 203 (257)
Q Consensus 144 ~~~l~~aRD~~G~rPLyyg~~~~g~l~fASe~~aL~~~~---------------~~~i~~~ppG~~~~~---~~g~--~~ 203 (257)
+|+++||++|+|||||+.. ++.++||||+++|...+ .+.|..+||||++.. ++++ .+
T Consensus 130 --~l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~~~t~~~~i~~l~pG~~l~i~~~~g~~~~~~ 206 (513)
T 1jgt_A 130 --RVLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADARRVAGLTGVYQVPAGAVMDIDLGSGTAVTHR 206 (513)
T ss_dssp --EEEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSEECSSCSSCEECCTTEEEEEETTTTEEEEEE
T ss_pred --EEEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCCccccccceEEcCCCcEEEEEcCCCCEEEEe
Confidence 4999999999999999987 58899999999998765 367999999999754 3443 56
Q ss_pred EecCCC
Q 025171 204 FEHPTR 209 (257)
Q Consensus 204 ~~~~~~ 209 (257)
||.+..
T Consensus 207 yw~~~~ 212 (513)
T 1jgt_A 207 TWTPGL 212 (513)
T ss_dssp CCCCCC
T ss_pred ecCCcc
Confidence 776543
No 7
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.94 E-value=1.5e-27 Score=230.06 Aligned_cols=146 Identities=13% Similarity=0.081 Sum_probs=123.6
Q ss_pred CcEEEEEecCC-CCCCCCCCeEecCCcEEEEEEeEEeehh---hHHHHhC-CCCCCCHHHHHHHHHHHHHhcCCchHHHh
Q 025171 53 NAAALAYVPPE-NPNSVSQRWFCGLHNVYCMFMGSLNNLS---SLNKQYG-LSKGSNEAMFVIEAYRTLRDRGPYPAHQV 127 (257)
Q Consensus 53 ~~~~lg~~rl~-~~~~~~QP~~~~~~~~~lv~nGeI~N~~---eL~~~l~-~~~s~~D~evll~~y~~~~~~G~~~~~~~ 127 (257)
++++|||+||+ +...+.||+.+.++.++++ |+|||+. +||++|. .+.+.+|+|+|+++|+ +||. ++
T Consensus 26 ~~~~igh~R~~t~~~~~~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEvil~l~~---~~g~----~~ 96 (503)
T 1q15_A 26 KGEALSNGYLFIEQNGHYQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAELLALLFT---RLGA----NA 96 (503)
T ss_dssp EEEEETTEEEEEETTCCEEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHHHHHHHH---HHCG----GG
T ss_pred CceeEeeeeEEEcCCCCCCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHHHHHHHH---HHHH----HH
Confidence 37899999998 4447899998877777777 9999999 9999885 3678999999999999 7885 89
Q ss_pred hcccccceEEEEEEcCCCEEEEEEcCCCCeEEEEEEeCCCe-----------------EEEEecchhhHhh-------cC
Q 025171 128 LRDLDGSFGFVLYDCKAGTIFAALDADEGVRLFWGIAADGS-----------------VVISDNLELIKAS-------CA 183 (257)
Q Consensus 128 l~~L~G~FAfvi~D~~~~~l~~aRD~~G~rPLyyg~~~~g~-----------------l~fASe~~aL~~~-------~~ 183 (257)
+++|+|+|||++||..++ |+++||++|+|||||+.. ++. ++||||+++|... ..
T Consensus 97 l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T~~ 174 (503)
T 1q15_A 97 LALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTPV 174 (503)
T ss_dssp GGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCCSB
T ss_pred HHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCccc
Confidence 999999999999998888 999999999999999986 566 8999999998764 13
Q ss_pred CceEEeCCCeEEEe-CCc------eEEEecCCC
Q 025171 184 KSFAPFPAGCMFHS-EQG------LMSFEHPTR 209 (257)
Q Consensus 184 ~~i~~~ppG~~~~~-~~g------~~~~~~~~~ 209 (257)
+.|..+|||+++.. .+| .++||.+..
T Consensus 175 ~~v~~l~pG~~~~i~~~g~~~~~~~~~yw~~~~ 207 (503)
T 1q15_A 175 KNAQRLKPGAVHVLTHDSEGYSFVESRTLTTPA 207 (503)
T ss_dssp TTEEECCSSEEEEEEECTTCCEEEEEEESCCCC
T ss_pred CCeEEECCCeEEEEeCCCcccccceeeecCCcc
Confidence 67999999999754 344 467776544
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.89 E-value=3.8e-23 Score=185.27 Aligned_cols=143 Identities=14% Similarity=0.182 Sum_probs=107.3
Q ss_pred CcEEEEEecCC--CC--CCCCCCeEecCCcEEEEEEeEEeehhhHHHHhC--C-------CCCCCHHHHHHHHHHHHHhc
Q 025171 53 NAAALAYVPPE--NP--NSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQYG--L-------SKGSNEAMFVIEAYRTLRDR 119 (257)
Q Consensus 53 ~~~~lg~~rl~--~~--~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l~--~-------~~s~~D~evll~~y~~~~~~ 119 (257)
+.++|||+|++ +. ..+.|||.. ++++++|||+|+|+.+||++|. . +.+.+|+|+|+++|. ++
T Consensus 81 g~~~igHvR~AT~g~~s~~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi~~l~~---~~ 155 (274)
T 3mdn_A 81 SGLFLSHVRASTGSCISRNNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLAL---SE 155 (274)
T ss_dssp EEEEEEEC------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHHHHHHH---HT
T ss_pred CCEEEEEEccccCCCCcccCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHHHHHHH---Hh
Confidence 46789999998 22 368999976 6799999999999999998874 1 268999999999996 34
Q ss_pred CC--c---hHHHhhcccccc-----------eEEEEEEcCCCEEEEEEcC-CCCeEEEEEEeCC--CeEEEEecchhhHh
Q 025171 120 GP--Y---PAHQVLRDLDGS-----------FGFVLYDCKAGTIFAALDA-DEGVRLFWGIAAD--GSVVISDNLELIKA 180 (257)
Q Consensus 120 G~--~---~~~~~l~~L~G~-----------FAfvi~D~~~~~l~~aRD~-~G~rPLyyg~~~~--g~l~fASe~~aL~~ 180 (257)
+. . .+.+++++|+|+ |+|+++| .++|+++||+ +|++||+|+...+ +.++||||. |..
T Consensus 156 ~~~~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d--~~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~~ 231 (274)
T 3mdn_A 156 GLEHDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSD--GQTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LET 231 (274)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEEC--SSCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C--
T ss_pred hhcCCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEc--CCEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--ccc
Confidence 32 1 235789999998 9999998 4789999998 9999977776533 689999998 433
Q ss_pred hcCCceEEeCCCeEEEe-CCceEEEe
Q 025171 181 SCAKSFAPFPAGCMFHS-EQGLMSFE 205 (257)
Q Consensus 181 ~~~~~i~~~ppG~~~~~-~~g~~~~~ 205 (257)
.+ +.+.++|||++++. ++++..+.
T Consensus 232 ~~-~~~~~v~pGeiv~i~~~~v~~~~ 256 (274)
T 3mdn_A 232 DE-GDWTELRPGRMLTIGAEGAAERD 256 (274)
T ss_dssp CC-SCCEECCSSEEEEEETTEEEEEE
T ss_pred CC-ceEEEECcCEEEEEeCCeEEEEE
Confidence 33 45999999999754 67776653
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.73 E-value=1.8e-18 Score=153.42 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=106.5
Q ss_pred CcEEEEEecCCCC----CCCCCCeEec--CCcEEEEEEeEEeehhhHHHHhCCCCCCCHHHHHHHHHHH-HHhc-CC---
Q 025171 53 NAAALAYVPPENP----NSVSQRWFCG--LHNVYCMFMGSLNNLSSLNKQYGLSKGSNEAMFVIEAYRT-LRDR-GP--- 121 (257)
Q Consensus 53 ~~~~lg~~rl~~~----~~~~QP~~~~--~~~~~lv~nGeI~N~~eL~~~l~~~~s~~D~evll~~y~~-~~~~-G~--- 121 (257)
+.++|||+|+++. ..+.|||... +++++++|||.|.|+.+ |.++..+.+.+|+|++++++.. +.+. +.
T Consensus 71 g~~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi~~li~~~~~~~~~~~~~ 149 (257)
T 1te5_A 71 SETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVP 149 (257)
T ss_dssp EEEEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHHHHHHHHHHHHHCSSCCC
T ss_pred ccEEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHHHHHHHHHHHHhcCCCch
Confidence 5689999999822 3689999764 45799999999999999 7665558899999999999964 2221 11
Q ss_pred -chHHHhhcccc------cceEEEEEEcCCCEEEEEEc----------CCCCeEEEE-------EE---eCCCeEEEEec
Q 025171 122 -YPAHQVLRDLD------GSFGFVLYDCKAGTIFAALD----------ADEGVRLFW-------GI---AADGSVVISDN 174 (257)
Q Consensus 122 -~~~~~~l~~L~------G~FAfvi~D~~~~~l~~aRD----------~~G~rPLyy-------g~---~~~g~l~fASe 174 (257)
..+.+++++|. |.|+|++.| .++|+++|| |+|+|||+. +. ..++.++||||
T Consensus 150 ~~a~~~al~~l~~~~~~~G~~n~~l~~--g~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~~~vvASE 227 (257)
T 1te5_A 150 VEVLLPVLISACDEYRKKGVFNALISD--GDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATE 227 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTBCCEEEEES--SSCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEEc--CCEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCCEEEEEeC
Confidence 12234555554 999999988 478999999 999999975 31 11246899999
Q ss_pred chhhHhhcCCceEEeCCCeEEEe-CCceE
Q 025171 175 LELIKASCAKSFAPFPAGCMFHS-EQGLM 202 (257)
Q Consensus 175 ~~aL~~~~~~~i~~~ppG~~~~~-~~g~~ 202 (257)
. |.. .+.++++|||++++. ++++.
T Consensus 228 ~--l~~--~~~wr~v~pGe~v~i~~~~~~ 252 (257)
T 1te5_A 228 P--LTD--NENWTLQQSGEWVLWWGGEVL 252 (257)
T ss_dssp C--SSS--SSSCEEECTTCEEEEETTEEE
T ss_pred c--cCC--CCCeeEeCCCEEEEEECCEEE
Confidence 5 442 457999999999765 55543
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.65 E-value=6.1e-16 Score=162.21 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=107.8
Q ss_pred CcEEEEEecCCCC----CCCCCCeEecCCcEEEEEEeEEeehhhHHHHh-------------------C-C-CCCCCHHH
Q 025171 53 NAAALAYVPPENP----NSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQY-------------------G-L-SKGSNEAM 107 (257)
Q Consensus 53 ~~~~lg~~rl~~~----~~~~QP~~~~~~~~~lv~nGeI~N~~eL~~~l-------------------~-~-~~s~~D~e 107 (257)
+..+|||+|+++. -.++|||. +|+|||||.|+..+|+.+ + . +.+.+|+|
T Consensus 202 g~~aigH~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSe 275 (1479)
T 1ea0_A 202 SDFAIYHQRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSG 275 (1479)
T ss_dssp BSEEEEEECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHH
T ss_pred eeEEEeeecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHH
Confidence 4689999999832 26789983 389999999999998542 1 2 67899999
Q ss_pred HHHHHHHHHHhcCCchH----------------------------HHhhcccccceEEEEEEcCCCEEEEEEcCCCCeEE
Q 025171 108 FVIEAYRTLRDRGPYPA----------------------------HQVLRDLDGSFGFVLYDCKAGTIFAALDADEGVRL 159 (257)
Q Consensus 108 vll~~y~~~~~~G~~~~----------------------------~~~l~~L~G~FAfvi~D~~~~~l~~aRD~~G~rPL 159 (257)
++.++++.+.+.|.... ..+++.++|.|++++.| .+.++++|||.|.|||
T Consensus 276 vld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~d--g~~l~a~~DrnGlRPl 353 (1479)
T 1ea0_A 276 SLDTVFEVMVRAGRTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTD--GRWVVGGMDRNGLRPM 353 (1479)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECS--SSEEEEECCTTCCSCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEe--CCEEEEEecCCCCcce
Confidence 99666664434442111 13468999999999977 5899999999999999
Q ss_pred EEEEeCCCeEEEEecchhhHhhcCCceE--EeCCCeEEEe
Q 025171 160 FWGIAADGSVVISDNLELIKASCAKSFA--PFPAGCMFHS 197 (257)
Q Consensus 160 yyg~~~~g~l~fASe~~aL~~~~~~~i~--~~ppG~~~~~ 197 (257)
.|+.++|+.+++|||..+|...+.+.++ ++.||+++..
T Consensus 354 ~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~i 393 (1479)
T 1ea0_A 354 RYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAV 393 (1479)
T ss_dssp EEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEE
T ss_pred EEEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEE
Confidence 9999877789999999999766656566 8999999754
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.61 E-value=2.4e-15 Score=158.07 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=107.1
Q ss_pred CcEEEEEecCCCC---C-CCCCCeEecCCcEEEEEEeEEeehhhHH------HH-----------h---C--CCCCCCHH
Q 025171 53 NAAALAYVPPENP---N-SVSQRWFCGLHNVYCMFMGSLNNLSSLN------KQ-----------Y---G--LSKGSNEA 106 (257)
Q Consensus 53 ~~~~lg~~rl~~~---~-~~~QP~~~~~~~~~lv~nGeI~N~~eL~------~~-----------l---~--~~~s~~D~ 106 (257)
+..+|||+|+++. . .++|||. +|+|||||.|...+| +. + + .+.+.||+
T Consensus 198 g~~aigH~RySTnt~p~w~~AQPf~------~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDS 271 (1520)
T 1ofd_A 198 SNFAVYHRRFSTNTMPKWPLAQPMR------LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDS 271 (1520)
T ss_dssp BSEEEEEECCCSSSCCCGGGSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHH
T ss_pred eeEEEEEccccCCCCCCcccCCchh------eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcH
Confidence 4689999999932 1 5789984 389999999888887 32 1 2 36889999
Q ss_pred HHHHHHHHHHHhcCCchH------------------------------HHhhcccccceEEEEEEcCCCEEEEEEcCCCC
Q 025171 107 MFVIEAYRTLRDRGPYPA------------------------------HQVLRDLDGSFGFVLYDCKAGTIFAALDADEG 156 (257)
Q Consensus 107 evll~~y~~~~~~G~~~~------------------------------~~~l~~L~G~FAfvi~D~~~~~l~~aRD~~G~ 156 (257)
|++.++++.+.+.|.... ..+++.++|.|++++.| .+.++++|||.|.
T Consensus 272 e~ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~d--g~~l~a~~DrnGl 349 (1520)
T 1ofd_A 272 YNLDSALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSD--GKIVGAGLDRNGL 349 (1520)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEEC--SSEEEEEECTTCC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEe--CCEEEEEecCCCC
Confidence 999877765434442111 12368899999999988 5899999999999
Q ss_pred eEEEEEEeCCCeEEEEecchhhHhhcCCceE--EeCCCeEEEe
Q 025171 157 VRLFWGIAADGSVVISDNLELIKASCAKSFA--PFPAGCMFHS 197 (257)
Q Consensus 157 rPLyyg~~~~g~l~fASe~~aL~~~~~~~i~--~~ppG~~~~~ 197 (257)
|||.|+.++|+.+++|||..+|...+.+.++ ++.||+++..
T Consensus 350 RPl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~i 392 (1520)
T 1ofd_A 350 RPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAV 392 (1520)
T ss_dssp SCCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEE
T ss_pred CceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEE
Confidence 9999999876789999999999766666666 8999999754
No 12
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=26.65 E-value=9.7 Score=30.46 Aligned_cols=27 Identities=15% Similarity=0.246 Sum_probs=21.0
Q ss_pred ccceEEEEEEcCCCEEEEEEcCCCCeEEEE
Q 025171 132 DGSFGFVLYDCKAGTIFAALDADEGVRLFW 161 (257)
Q Consensus 132 ~G~FAfvi~D~~~~~l~~aRD~~G~rPLyy 161 (257)
.|.|++|+.+ .+.++-..++ |++|||=
T Consensus 27 e~~~ScVv~~--~~~i~ts~~r-Gv~pL~~ 53 (151)
T 1vk9_A 27 KKDLSLLAYS--GRSIFESKDS-GLKPVVE 53 (151)
T ss_dssp HTTCSEEEES--SSEEEEECCS-TTHHHHH
T ss_pred hCCeeEEEec--CCEEEEeCCc-ChHHHHH
Confidence 5889999954 5677777665 9999983
No 13
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=23.76 E-value=1.1e+02 Score=17.65 Aligned_cols=20 Identities=20% Similarity=0.494 Sum_probs=12.0
Q ss_pred cccceEEEEEEcCCCE-EEEE
Q 025171 131 LDGSFGFVLYDCKAGT-IFAA 150 (257)
Q Consensus 131 L~G~FAfvi~D~~~~~-l~~a 150 (257)
.+=.|-|+|+|..++. ||++
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G 27 (35)
T 2xn6_B 7 IDRSFMLLILERSTRSILFLG 27 (35)
T ss_dssp CCBCEEEEEEETTTTEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEE
Confidence 3556777777766553 3444
No 14
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=23.44 E-value=1.1e+02 Score=18.33 Aligned_cols=21 Identities=19% Similarity=0.437 Sum_probs=13.8
Q ss_pred cccceEEEEEEcCCCE-EEEEE
Q 025171 131 LDGSFGFVLYDCKAGT-IFAAL 151 (257)
Q Consensus 131 L~G~FAfvi~D~~~~~-l~~aR 151 (257)
.+=.|-|+|+|..++. ||++|
T Consensus 12 ~drPFlf~I~~~~t~~iLF~G~ 33 (40)
T 2riv_B 12 IDRSFMLLILERSTRSILFLGK 33 (40)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEeCCCCcEEEEEE
Confidence 5667888888876653 44444
No 15
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=21.41 E-value=1.2e+02 Score=16.93 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=11.8
Q ss_pred cccceEEEEEEcCCCE-EEEE
Q 025171 131 LDGSFGFVLYDCKAGT-IFAA 150 (257)
Q Consensus 131 L~G~FAfvi~D~~~~~-l~~a 150 (257)
.+=.|-|+|+|..++. ||++
T Consensus 6 ~drPFlf~I~~~~t~~iLF~G 26 (31)
T 1hle_B 6 ADHPFIFFIRHNPSANILFLG 26 (31)
T ss_dssp CCSCEEEEEEETTTTEEEEEE
T ss_pred EeCCEEEEEEECCCCcEEEEE
Confidence 3456777777766553 3443
No 16
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=21.02 E-value=1.2e+02 Score=17.65 Aligned_cols=21 Identities=29% Similarity=0.722 Sum_probs=13.0
Q ss_pred cccceEEEEEEcCCCE-EEEEE
Q 025171 131 LDGSFGFVLYDCKAGT-IFAAL 151 (257)
Q Consensus 131 L~G~FAfvi~D~~~~~-l~~aR 151 (257)
++=.|-|+|+|..++. ||++|
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 4afx_B 8 IDRPFHFMIYEETSGMLLFLGR 29 (36)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred eeCCEEEEEEECCCCcEEEEEE
Confidence 4567788888766554 44443
No 17
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=21.00 E-value=1.3e+02 Score=17.18 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=9.4
Q ss_pred ccceEEEEEEcCCCE
Q 025171 132 DGSFGFVLYDCKAGT 146 (257)
Q Consensus 132 ~G~FAfvi~D~~~~~ 146 (257)
+=.|-|+|+|..++.
T Consensus 8 drPFlf~I~~~~t~~ 22 (34)
T 2h4p_B 8 DHPFHFFIRHNKSKT 22 (34)
T ss_dssp CSCEEEEEEETTTTE
T ss_pred cCCEEEEEEECCCCe
Confidence 446777777765553
Done!