BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025181
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRM5|CPR49_ARATH GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2
SV=1
Length = 256
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 187/256 (73%), Positives = 222/256 (86%)
Query: 1 MVGPARPQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQV 60
MVGPARPQ VLFGSSIVQ+SF +GGWGAILS++YARKADI+LRGYYGWNS RAL+V+DQV
Sbjct: 1 MVGPARPQIVLFGSSIVQMSFGHGGWGAILSEVYARKADIILRGYYGWNSSRALEVVDQV 60
Query: 61 FPKDAPIQPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIF 120
FPKDA +QPSLVIVY GGNDSM PH SGLGPHVPL EYV+NM++IA HL+SLS TRIIF
Sbjct: 61 FPKDAAVQPSLVIVYFGGNDSMAPHSSGLGPHVPLTEYVDNMKKIALHLQSLSDFTRIIF 120
Query: 121 LSTPPVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDW 180
LS+PPVDEA++ Q S SE++RTN+LC+ YSDAC+ LC ELG++VVDLF+ QK DDW
Sbjct: 121 LSSPPVDEAKVRQNQSPYLSEVIRTNDLCKTYSDACVELCQELGLEVVDLFSTFQKADDW 180
Query: 181 KNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYDLVAASGER 240
K CFTDGIHLS +GSKIV EIL+V+K+AEW PSLHWKSMPTEF++DSPYDLV+A G++
Sbjct: 181 KTVCFTDGIHLSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYDLVSADGKQ 240
Query: 241 TLNPSDWTFHREIQWD 256
T+N S+WT+ E QWD
Sbjct: 241 TVNSSEWTYFWEEQWD 256
>sp|O80443|GDL46_ARATH GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana GN=At2g38180
PE=2 SV=1
Length = 312
Score = 307 bits (787), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/240 (61%), Positives = 187/240 (77%), Gaps = 10/240 (4%)
Query: 1 MVGPARPQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQV 60
MVGP RPQ VLFGSSIVQ SF++ GWGA L+D+Y+R ADI+LRGY GWNSR AL+VL QV
Sbjct: 1 MVGPVRPQIVLFGSSIVQYSFTDRGWGATLADLYSRTADIILRGYAGWNSRFALKVLHQV 60
Query: 61 FPKDAPIQPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIF 120
FPKDA IQPSLVIVY GGNDS PHPSG GPHVPL E++ENMR+I HL SLS TR+IF
Sbjct: 61 FPKDAVIQPSLVIVYFGGNDSTHPHPSGHGPHVPLSEFIENMRKIGEHLLSLSDKTRVIF 120
Query: 121 LSTPPVDEARINQGTSEIFSELV--RTNELCQKYSDACINLCHELGVKVVDLFTAIQKRD 178
L+ PP++E +I +F + + R+NELC+ Y++ +NLC E+ VK +D++TAIQ++D
Sbjct: 121 LTPPPMNEKQIEI----VFGDAIKGRSNELCRPYAEELLNLCREINVKGIDIWTAIQQQD 176
Query: 179 DWKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYDLVAASG 238
DW N+CFTDGIH + + S+IVV EILKVL+ A+WKPSL+WKS+P EF P+D A +
Sbjct: 177 DWLNSCFTDGIHFTAKASEIVVKEILKVLRGADWKPSLYWKSLPVEF----PFDFDAPNS 232
>sp|Q9FM04|GDL88_ARATH GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana GN=At5g62930
PE=2 SV=3
Length = 242
Score = 174 bits (440), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 9/232 (3%)
Query: 6 RPQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDA 65
RP+ VLFG SI SF +GGWG+ L+D Y+RKAD+++RGY G+N+R AL +L +FP +
Sbjct: 2 RPEIVLFGDSITAQSFRSGGWGSALADAYSRKADVVVRGYGGYNTRWALFLLHHIFPLGS 61
Query: 66 PIQPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLSTPP 125
P ++ G ND+ + HVP+ EY +N+R+I HLK S I+ ++ PP
Sbjct: 62 SSPPVATTIFFGANDAALKGRTSDRQHVPVEEYTDNVRKIVQHLKKCSPTMLIVLITPPP 121
Query: 126 VDEARINQGTSEIFSELV-----RTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDW 180
+DEA I+ E RTNE Y+ C+ L ELG++ V+L++ +Q+ +DW
Sbjct: 122 IDEAGRQSYAESIYGEKAMKEPERTNETTGVYAQHCVALAEELGLRCVNLWSKMQETNDW 181
Query: 181 KNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYD 232
+ +DG+HL+ EG+ +V E+ +V ++A P + MP +F S D
Sbjct: 182 QKKYLSDGLHLTPEGNGVVFDEVSRVFREAWLSP----EEMPFDFPHHSHID 229
>sp|Q6NMR9|GDL84_ARATH GDSL esterase/lipase At5g45920 OS=Arabidopsis thaliana GN=At5g45920
PE=2 SV=1
Length = 241
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 131/209 (62%), Gaps = 5/209 (2%)
Query: 6 RPQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFP--- 62
R + LFG SI + SFS+GGWGA L+D+ RKAD++LRGY G+N+R AL+V+++VFP
Sbjct: 3 RRKIFLFGDSITEESFSDGGWGASLADLLRRKADMVLRGYSGYNTRWALKVVERVFPVAE 62
Query: 63 KDAPIQPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLS 122
+D P+ V V+ G ND+ P HVPL EY +N+R I + LK+ T II ++
Sbjct: 63 EDGGDSPAAVTVFFGANDACLPERCSGFQHVPLHEYKQNLRSIVSFLKNRWPQTAIILIT 122
Query: 123 TPPVD-EARINQGTSEIFSEL-VRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDW 180
PP+D EAR+ E + L RTNE+ Y+ ACI + E + V DL++ +Q+ +W
Sbjct: 123 PPPIDEEARLRYPYIENTTGLPERTNEVAGLYAKACIAVAEECQISVTDLWSKMQQIPNW 182
Query: 181 KNACFTDGIHLSEEGSKIVVAEILKVLKQ 209
+ C DG+HLS G+K+V E+ K LK+
Sbjct: 183 QTECLWDGLHLSRVGNKVVFEEVAKKLKE 211
>sp|Q3SZ16|IAH1_BOVIN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Bos taurus
GN=IAH1 PE=2 SV=1
Length = 249
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Query: 7 PQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAP 66
P+ +LFG SI Q SF GGWGA L+D+ RK D+L RG+ G+N+R A +L ++ K +
Sbjct: 16 PRVLLFGDSITQFSFQQGGWGASLADMLVRKCDVLNRGFSGYNTRWAKIILPRLVRKGSG 75
Query: 67 I-QPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCAT-RIIFLSTP 124
+ P V ++ G NDS HVPL E+V N+R + +L+S+ R+I ++ P
Sbjct: 76 LDSPVAVTIFFGANDS-ALKDENPKQHVPLEEFVANLRSMVRYLRSVDVPEGRLILITPP 134
Query: 125 PVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDWKNAC 184
P+ EA Q + +L R N + +Y+ AC+ + + G +DL++ +QK ++
Sbjct: 135 PLCEAAWAQECLQQGCKLNRLNSVVGEYARACLQVAQDCGADALDLWSLMQKDGQDFSSY 194
Query: 185 FTDGIHLSEEGSKIVVAEILKVLKQ 209
+DG+HLS +G++ V + + ++++
Sbjct: 195 LSDGLHLSPKGNEFVFSHLWPLIEK 219
>sp|Q9DB29|IAH1_MOUSE Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus
GN=Iah1 PE=2 SV=1
Length = 249
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 116/205 (56%), Gaps = 3/205 (1%)
Query: 7 PQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAP 66
P+ +LFG SI Q SF GGWG++L+D RK D+L RG+ G+N+R A +L ++ K
Sbjct: 16 PRVLLFGDSITQFSFQQGGWGSLLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKGPG 75
Query: 67 IQ-PSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCA-TRIIFLSTP 124
++ P V ++ G NDS HVPL EY N+R + +L+S+ R+I ++ P
Sbjct: 76 MENPVAVTIFFGANDS-SLKDENPKQHVPLDEYSANLRDMVQYLRSVDVPRERVILITPP 134
Query: 125 PVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDWKNAC 184
P+ EA + +L R N + +Y++AC+ + + G V+DL+T +QK ++
Sbjct: 135 PLCEAAWEKECVLKGCKLNRLNSVVGEYANACLQVARDCGTDVLDLWTLMQKDSQDFSSY 194
Query: 185 FTDGIHLSEEGSKIVVAEILKVLKQ 209
+DG+HLS G++ + + +L +
Sbjct: 195 LSDGLHLSPMGNEFLFLNLCPLLDK 219
>sp|Q711G3|IAH1_RAT Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus
GN=Iah1 PE=2 SV=2
Length = 249
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 116/205 (56%), Gaps = 3/205 (1%)
Query: 7 PQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAP 66
P+ +LFG SI Q SF GGWG +L+D RK D+L RG+ G+N+R A +L ++ K A
Sbjct: 16 PRVLLFGDSITQFSFQQGGWGTLLADRLVRKCDVLNRGFSGYNTRWAKIILPRIIRKGAG 75
Query: 67 IQ-PSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSC-ATRIIFLSTP 124
++ P V ++ G NDS + HVPL EY N+R + +L+S+ R+I ++ P
Sbjct: 76 LENPVAVTIFFGANDSTLKDENP-KQHVPLDEYSANLRDMVQYLRSVDIPKERVILITPP 134
Query: 125 PVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDWKNAC 184
P+ EA + +L R N +Y+ AC+ + + G V+DL+T +QK + ++
Sbjct: 135 PLCEAAWEKECILKGCKLNRLNVAVGEYAKACLQVARDCGTDVLDLWTLMQKDNQDFSSY 194
Query: 185 FTDGIHLSEEGSKIVVAEILKVLKQ 209
+DG+HLS G++ + + +L +
Sbjct: 195 LSDGLHLSPLGNEFLFFHLWPLLDK 219
>sp|Q503L4|IAH1_DANRE Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Danio rerio
GN=iah1 PE=2 SV=2
Length = 238
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 7 PQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFP-KDA 65
PQ +LFG SI Q +F GWG+ L RK D++ RG G+N+R A VL ++ P DA
Sbjct: 10 PQIILFGDSITQFAFQANGWGSELCHKLERKCDVINRGLSGYNTRWAKIVLPRIVPVSDA 69
Query: 66 PIQPSLVIVYVGGNDSM--GPHPSGLGPHVPLPEYVENMRRIATHLKSLSCAT-RIIFLS 122
PI S V V+ G ND +P+ HVPL E+ EN++ I L S + IIF++
Sbjct: 70 PI--SAVTVFFGANDCALEDKNPT---QHVPLQEFSENLKDIVRFLVSKGVSNDNIIFIT 124
Query: 123 TPPVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDWKN 182
PP+ EA + S L R N + +Y+ AC+ E GV V+DL+T +QK +
Sbjct: 125 PPPLLEADWEKECLLKGSPLNRLNSVAGQYAQACVQAAGESGVDVLDLWTLMQKDGQDFS 184
Query: 183 ACFTDGIHLSEEGSKIVVAEILKVLKQ 209
+DG+HLS++G++ V + +L++
Sbjct: 185 VYLSDGLHLSDKGNQFVAEHLWTLLER 211
>sp|Q2TAA2|IAH1_HUMAN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Homo sapiens
GN=IAH1 PE=1 SV=1
Length = 248
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 4/205 (1%)
Query: 7 PQFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAP 66
P+ +LFG SI Q SF GGWGA L+D RK D+L RG+ G+N+R A +L ++ K
Sbjct: 16 PRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKGNS 75
Query: 67 IQ-PSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSC-ATRIIFLSTP 124
+ P V ++ G NDS H+PL EY N++ + +LKS+ R+I ++
Sbjct: 76 LDIPVAVTIFFGANDS-ALKDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPT 134
Query: 125 PVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDWKNAC 184
P+ E + +L R N + +Y++AC+ + + G V+DL+T +Q D+ ++
Sbjct: 135 PLCETAWEEQCIIQGCKLNRLNSVVGEYANACLQVAQDCGTDVLDLWTLMQDSQDF-SSY 193
Query: 185 FTDGIHLSEEGSKIVVAEILKVLKQ 209
+DG+HLS +G++ + + + ++++
Sbjct: 194 LSDGLHLSPKGNEFLFSHLWPLIEK 218
>sp|P41734|IAH1_YEAST Isoamyl acetate-hydrolyzing esterase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=IAH1 PE=1 SV=1
Length = 238
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 120/232 (51%), Gaps = 23/232 (9%)
Query: 8 QFVLFGSSIVQLSFSNG---------GWGAILSDIYARKADILLRGYYGWNSRRALQVLD 58
+F+LFG SI + +F+ GA L + Y RK DIL RG+ G+ SR AL++L
Sbjct: 5 KFLLFGDSITEFAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALKILP 64
Query: 59 QVFPKDAPIQPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRI 118
++ ++ I + +++G ND+ P VPLPE+++N+R++ + +KS R
Sbjct: 65 EILKHESNI--VMATIFLGANDACSAGPQS----VPLPEFIDNIRQMVSLMKSYHI--RP 116
Query: 119 IFLSTPPVDEARINQGTSEIFS-ELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKR 177
I + VD + + SE + RTNE YSDA L +E V V L A Q+
Sbjct: 117 IIIGPGLVDREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANEEKVPFVALNKAFQQE 176
Query: 178 --DDWKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSE 227
D W+ TDG+H S +G KI E+LKV++ + P H K+M + +
Sbjct: 177 GGDAWQQ-LLTDGLHFSGKGYKIFHDELLKVIET--FYPQYHPKNMQYKLKD 225
>sp|O74648|IAH1_SCHPO Isoamyl acetate-hydrolyzing esterase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=iah1 PE=2 SV=1
Length = 246
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 8 QFVLFGSSIVQLSFSNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAPI 67
+ + G SI Q F+ GG+ A L + Y R+ + + G+ G+ SR L+ L ++ P+
Sbjct: 39 RLTIIGDSITQKGFTPGGYCAELMNFYQRRLRVDVWGFSGYTSRHVLRYLPEI-----PL 93
Query: 68 Q---PSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLS-- 122
+ L+IV++G ND + G P+ E+ N+ + ++II +S
Sbjct: 94 EIDSTKLLIVFLGTNDC---QLTETGYMCPVDEFKNNLLALTRPFPH----SKIIIVSPG 146
Query: 123 --TPPVDEARINQGTSEIFSELVRTNELCQKYSDACINLCHELGVKVVDLFTAIQKRDDW 180
T + R + SE V T + S INL I K
Sbjct: 147 ICTKDICFKREQEPYVIAASETVNTLNKSKANSAGLINLYE------------ITKSYPT 194
Query: 181 KNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEF 225
FTDG+H S G ++ EI+ + +A W P L ++P +F
Sbjct: 195 PELLFTDGLHFSSLGYSLLFNEIVATISKA-W-PELLPNNLPLQF 237
>sp|P0ADA1|TESA_ECOLI Acyl-CoA thioesterase I OS=Escherichia coli (strain K12) GN=tesA
PE=1 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 22 SNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAPIQPSLVIVYVGGNDS 81
++ W A+L+D + K ++ G S++ L L + + QP V+V +GGND
Sbjct: 45 ASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQH---QPRWVLVELGGNDG 101
Query: 82 MGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLSTPPVDEARINQGTSEIFSE 141
+ G P + + +R+I +K+ + ++ + P R N+ S I+ +
Sbjct: 102 L----RGFQPQ----QTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPK 153
Query: 142 LVR 144
L +
Sbjct: 154 LAK 156
>sp|P0ADA2|TESA_ECOL6 Acyl-CoA thioesterase I OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=tesA PE=3 SV=1
Length = 208
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 22 SNGGWGAILSDIYARKADILLRGYYGWNSRRALQVLDQVFPKDAPIQPSLVIVYVGGNDS 81
++ W A+L+D + K ++ G S++ L L + + QP V+V +GGND
Sbjct: 45 ASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQH---QPRWVLVELGGNDG 101
Query: 82 MGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLSTPPVDEARINQGTSEIFSE 141
+ G P + + +R+I +K+ + ++ + P R N+ S I+ +
Sbjct: 102 L----RGFQPQ----QTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPK 153
Query: 142 LVR 144
L +
Sbjct: 154 LAK 156
>sp|P0ADH9|FIME_SHIFL Type 1 fimbriae regulatory protein FimE OS=Shigella flexneri
GN=fimE PE=3 SV=1
Length = 198
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 175 QKRDDWKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYDLV 234
Q+R +WK A TD I +S GS++ + ++++ A + ++ P Y+L
Sbjct: 88 QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL- 146
Query: 235 AASGERTLNPSDWTFHREIQ 254
A G T D+ HR I+
Sbjct: 147 AERGADTRLIQDYLGHRNIR 166
>sp|P0ADH7|FIME_ECOLI Type 1 fimbriae regulatory protein FimE OS=Escherichia coli (strain
K12) GN=fimE PE=3 SV=1
Length = 198
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 175 QKRDDWKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYDLV 234
Q+R +WK A TD I +S GS++ + ++++ A + ++ P Y+L
Sbjct: 88 QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL- 146
Query: 235 AASGERTLNPSDWTFHREIQ 254
A G T D+ HR I+
Sbjct: 147 AERGADTRLIQDYLGHRNIR 166
>sp|P0ADH8|FIME_ECOL6 Type 1 fimbriae regulatory protein FimE OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=fimE PE=3 SV=1
Length = 198
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 175 QKRDDWKNACFTDGIHLSEEGSKIVVAEILKVLKQAEWKPSLHWKSMPTEFSEDSPYDLV 234
Q+R +WK A TD I +S GS++ + ++++ A + ++ P Y+L
Sbjct: 88 QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL- 146
Query: 235 AASGERTLNPSDWTFHREIQ 254
A G T D+ HR I+
Sbjct: 147 AERGADTRLIQDYLGHRNIR 166
>sp|Q9LF10|CRS1_ARATH Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=2
SV=2
Length = 720
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 20 SFSNGGWGAILSDIYARKADILLRG----YYGWNSRRALQVLDQVFPKDAPIQPSLVIVY 75
S+S+ G I S +Y R+AD LL G Y W RR FP DA + P +V Y
Sbjct: 294 SYSSEGQDEISSSLYEREADRLLDGLGPRYMDWWMRRP-------FPVDADLLPEVVNGY 346
Query: 76 V 76
+
Sbjct: 347 M 347
>sp|Q54873|HYSA_STRPN Hyaluronate lyase OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=SP_0314 PE=1 SV=2
Length = 1066
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 120 FLSTPPVDEARINQGTSEIFSELVRTNELCQ-------------KYSDACINLCHELGVK 166
++ P VD A NQ E+ S L+ NE Q KY D+ + ++ V
Sbjct: 912 YMLIPNVDRATFNQMIKELESSLIENNETLQSVYDAKQGVWGIVKYDDSVSTISNQFQVL 971
Query: 167 VVDLFTAIQKRDDWKNACFTDGIHLSEEGSKIVVAEILKVLKQA 210
++T ++ D++K A + S E+ K L+QA
Sbjct: 972 KRGVYTIRKEGDEYKIAYYNPETQESAPDQ-----EVFKKLEQA 1010
>sp|Q110V5|ARGC_TRIEI N-acetyl-gamma-glutamyl-phosphate reductase OS=Trichodesmium
erythraeum (strain IMS101) GN=argC PE=3 SV=1
Length = 352
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 68 QPSLVIVYVGGNDSMGPHPSGLGPHVPLPEYVENMRRIATHLKSLSCATRIIFLSTP 124
P + +VY+GG+ S G S + PH+ E+ +++ + L ++ ++I+FLS P
Sbjct: 29 HPKVEVVYLGGDSSAGKPFSSIYPHL---EHSVDLKIESIELDKIANKSQIVFLSLP 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,792,227
Number of Sequences: 539616
Number of extensions: 4304778
Number of successful extensions: 10339
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 10309
Number of HSP's gapped (non-prelim): 23
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)