Query 025182
Match_columns 256
No_of_seqs 87 out of 89
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 05:20:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025182.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025182hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vk6a2 d.113.1.4 (A:126-256) 37.9 7.7 0.00056 27.9 2.2 18 162-179 3-20 (131)
2 d2dcfa1 e.3.1.1 (A:5-392) 6-am 26.7 26 0.0019 29.5 4.0 58 156-215 70-128 (388)
3 d1ryaa_ d.113.1.5 (A:) GDP-man 22.3 22 0.0016 25.6 2.3 22 158-179 12-36 (160)
4 d1k2ea_ d.113.1.1 (A:) Hypothe 19.7 24 0.0017 24.6 2.0 15 165-179 4-18 (152)
5 d1irya_ d.113.1.1 (A:) 7,8-dih 18.9 30 0.0022 25.1 2.5 18 162-179 4-22 (156)
6 d1vhma_ d.110.2.1 (A:) Hypothe 18.8 1.6E+02 0.011 21.1 9.0 77 150-239 26-106 (159)
7 d1qw2a_ d.249.1.1 (A:) Hypothe 18.3 14 0.001 27.4 0.5 17 235-251 31-47 (102)
8 d1puna_ d.113.1.1 (A:) Nucleos 7.5 27 0.002 24.2 -1.0 16 164-179 7-22 (129)
9 d2b0va1 d.113.1.1 (A:4-149) Hy 7.5 1E+02 0.0075 21.1 2.2 16 165-180 6-21 (146)
10 d1p1ma1 b.92.1.4 (A:1-49,A:331 7.4 1.5E+02 0.011 21.5 3.3 48 153-215 75-122 (123)
No 1
>d1vk6a2 d.113.1.4 (A:126-256) NADH pyrophosphatase {Escherichia coli [TaxId: 562]}
Probab=37.85 E-value=7.7 Score=27.90 Aligned_cols=18 Identities=22% Similarity=0.264 Sum_probs=14.8
Q ss_pred ccccEEEEEECCEEEEEE
Q 025182 162 TCCRSLVVVYDGIYLLQI 179 (256)
Q Consensus 162 T~a~SvlV~~~G~vLLrR 179 (256)
++|-.++|..++++||.|
T Consensus 3 ~paViv~i~~~~~vLL~~ 20 (131)
T d1vk6a2 3 APCIIVAIRRDDSILLAQ 20 (131)
T ss_dssp EEEEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEeCCEEEEEE
Confidence 456678899999999986
No 2
>d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
Probab=26.72 E-value=26 Score=29.54 Aligned_cols=58 Identities=16% Similarity=0.049 Sum_probs=34.5
Q ss_pred HHHhhhccccEEEEEECCEEEEEEeeccCCCCCCcceeccc-cccchhHHHHHHHhccCce
Q 025182 156 ESLSAVTCCRSLVVVYDGIYLLQIGMAAESGNSGEAVIVDA-SKLKQGSVYLGVMRSKAQR 215 (256)
Q Consensus 156 ~~LLtnT~a~SvlV~~~G~vLLrRGi~~~~~~~~~a~~vd~-~~~~pG~I~~r~~~~~~~i 215 (256)
+.+|..|.+.++||.++|+++..+-.-+-.++ ....+-. +|.--+.+.-.+.++|+--
T Consensus 70 ~~~l~~~~t~a~lV~~~G~iv~E~y~~~~~~~--t~~~~~SvtKs~ta~li~~lve~G~l~ 128 (388)
T d2dcfa1 70 EQRLEQTYTDAFLVLRGTEVVAEYYRAGFAPD--DRHLLMAVSKSLCGTVVGALVDEGRID 128 (388)
T ss_dssp HHHHHHTTEEEEEEEETTEEEEEEECTTCCTT--CCEECTTHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHhcCCcEEEEEECCEEEEEEecCCCCcc--cchhHHHHHHHHHHHHHHHHHhcCccc
Confidence 45678999999999999999988743221110 0111110 1223355556677777654
No 3
>d1ryaa_ d.113.1.5 (A:) GDP-mannose mannosyl hydrolase NudD {Escherichia coli [TaxId: 562]}
Probab=22.33 E-value=22 Score=25.64 Aligned_cols=22 Identities=23% Similarity=0.241 Sum_probs=13.9
Q ss_pred Hhhhcc--ccEEEEEE-CCEEEEEE
Q 025182 158 LSAVTC--CRSLVVVY-DGIYLLQI 179 (256)
Q Consensus 158 LLtnT~--a~SvlV~~-~G~vLLrR 179 (256)
+.++|+ |-+++|.. +|++||.+
T Consensus 12 ~~~~~p~~~v~~vi~~~~~~vLL~k 36 (160)
T d1ryaa_ 12 VVRSTPLVSLDFIVENSRGEFLLGK 36 (160)
T ss_dssp HHHHSCEEEEEEEEECTTSCEEEEE
T ss_pred HhhcCCEEEEEEEEEeCCCeEEEEE
Confidence 467887 44445553 47888865
No 4
>d1k2ea_ d.113.1.1 (A:) Hypothetical protein PAE3301 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=19.66 E-value=24 Score=24.63 Aligned_cols=15 Identities=40% Similarity=0.301 Sum_probs=12.0
Q ss_pred cEEEEEECCEEEEEE
Q 025182 165 RSLVVVYDGIYLLQI 179 (256)
Q Consensus 165 ~SvlV~~~G~vLLrR 179 (256)
.+.||.+||++||.+
T Consensus 4 a~~vi~~d~kvLl~~ 18 (152)
T d1k2ea_ 4 TSGVLVENGKVLLVK 18 (152)
T ss_dssp EEEECEETTEEEEEE
T ss_pred EEEEEEECCEEEEEE
Confidence 456778899999876
No 5
>d1irya_ d.113.1.1 (A:) 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.87 E-value=30 Score=25.11 Aligned_cols=18 Identities=28% Similarity=0.237 Sum_probs=12.2
Q ss_pred ccccEEE-EEECCEEEEEE
Q 025182 162 TCCRSLV-VVYDGIYLLQI 179 (256)
Q Consensus 162 T~a~Svl-V~~~G~vLLrR 179 (256)
|.-.+++ |..+|++||.+
T Consensus 4 ~r~~~~v~i~~~~~vLL~~ 22 (156)
T d1irya_ 4 SRLYTLVLVLQPQRVLLGM 22 (156)
T ss_dssp CEEEEEECEECSSEEEEEE
T ss_pred cEEEEEEEEEECCEEEEEE
Confidence 3334444 77899999973
No 6
>d1vhma_ d.110.2.1 (A:) Hypothetical protein YebR {Escherichia coli [TaxId: 562]}
Probab=18.75 E-value=1.6e+02 Score=21.07 Aligned_cols=77 Identities=10% Similarity=0.096 Sum_probs=46.6
Q ss_pred HHHHHHHHHhh---hccccEEEEEECCEEEEEEeeccCCCCCCcceeccccccchh-HHHHHHHhccCceeeecccccCC
Q 025182 150 ELLWAWESLSA---VTCCRSLVVVYDGIYLLQIGMAAESGNSGEAVIVDASKLKQG-SVYLGVMRSKAQRYLANLLLYPG 225 (256)
Q Consensus 150 ELAWaS~~LLt---nT~a~SvlV~~~G~vLLrRGi~~~~~~~~~a~~vd~~~~~pG-~I~~r~~~~~~~iyLvNL~LyPG 225 (256)
-|+-....|.+ ++...++.+..+++..+ +...... +...+..| -+|-++.++++++.+.|+.-.|.
T Consensus 26 ~L~~i~~~l~~~~~~~~~~~~yl~d~~~~~l--~~~~~~~--------~~~~i~~g~g~~g~v~~~~~~~~v~d~~~d~~ 95 (159)
T d1vhma_ 26 TLANTSALLYERLTDINWAGFYLLEDDTLVL--GPFQGKI--------ACVRIPVGRGVCGTAVARNQVQRIEDVHVFDG 95 (159)
T ss_dssp HHHHHHHHHHHHSSSCSEEEEEEEETTEEEE--EEEEESC--------CCSEEETTSHHHHHHHHHTSCEEESCTTTCTT
T ss_pred HHHHHHHHHHHhhccCceEEEEEEECCEeee--eeecCCc--------ceeEEecCCChHHHHHHcCCcEEecChHHhhh
Confidence 36666666644 33444555666665444 2222111 11245455 59999999999999999998887
Q ss_pred CCCCCCCCCCCccc
Q 025182 226 RSELPFLPSNTQVH 239 (256)
Q Consensus 226 R~EFd~LP~NtqaV 239 (256)
...+ ..++.|.
T Consensus 96 ~~~~---~~~~~S~ 106 (159)
T d1vhma_ 96 HIAC---DAASNSE 106 (159)
T ss_dssp CCCS---CCCCSEE
T ss_pred hhhc---cccccee
Confidence 6544 3455555
No 7
>d1qw2a_ d.249.1.1 (A:) Hypothetical protein Ta1206 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=18.28 E-value=14 Score=27.37 Aligned_cols=17 Identities=12% Similarity=0.344 Sum_probs=15.0
Q ss_pred CCccccccceeeEEeee
Q 025182 235 NTQVHTGELIFLTCSFI 251 (256)
Q Consensus 235 NtqaV~~e~~~~~~~~~ 251 (256)
|.-.+.+++|++-||.+
T Consensus 31 ~Ll~i~~~~G~imCG~l 47 (102)
T d1qw2a_ 31 PLLFIKGSKGYAMCGYL 47 (102)
T ss_dssp CEEEEECSSCEEECTTC
T ss_pred cEEEEEcCCcEEEeccc
Confidence 77777999999999976
No 8
>d1puna_ d.113.1.1 (A:) Nucleoside triphosphate pyrophosphorylase (MutT) {Escherichia coli [TaxId: 562]}
Probab=7.51 E-value=27 Score=24.15 Aligned_cols=16 Identities=0% Similarity=-0.008 Sum_probs=11.1
Q ss_pred ccEEEEEECCEEEEEE
Q 025182 164 CRSLVVVYDGIYLLQI 179 (256)
Q Consensus 164 a~SvlV~~~G~vLLrR 179 (256)
+.++++..+|++|+.+
T Consensus 7 av~ii~~~~~~vLl~~ 22 (129)
T d1puna_ 7 AVGIIRNENNEIFITR 22 (129)
T ss_dssp EEEECBCTTSCEEEBC
T ss_pred EEEEEEECCCEEEEEE
Confidence 4455555688999976
No 9
>d2b0va1 d.113.1.1 (A:4-149) Hypothetical protein NE0184 {Nitrosomonas europaea [TaxId: 915]}
Probab=7.48 E-value=1e+02 Score=21.11 Aligned_cols=16 Identities=31% Similarity=0.299 Sum_probs=12.3
Q ss_pred cEEEEEECCEEEEEEe
Q 025182 165 RSLVVVYDGIYLLQIG 180 (256)
Q Consensus 165 ~SvlV~~~G~vLLrRG 180 (256)
-+++|..+|++||-+.
T Consensus 6 va~ii~~~~k~Llv~r 21 (146)
T d2b0va1 6 VAAVIEQDDKYLLVEE 21 (146)
T ss_dssp EEEECEETTEEEEEEE
T ss_pred EEEEEEeCCEEEEEEE
Confidence 3567789999998764
No 10
>d1p1ma1 b.92.1.4 (A:1-49,A:331-404) Hypothetical protein TM0936 {Thermotoga maritima [TaxId: 2336]}
Probab=7.45 E-value=1.5e+02 Score=21.46 Aligned_cols=48 Identities=10% Similarity=0.078 Sum_probs=32.1
Q ss_pred HHHHHHhhhccccEEEEEECCEEEEEEeeccCCCCCCcceeccccccchhHHHHHHHhccCce
Q 025182 153 WAWESLSAVTCCRSLVVVYDGIYLLQIGMAAESGNSGEAVIVDASKLKQGSVYLGVMRSKAQR 215 (256)
Q Consensus 153 WaS~~LLtnT~a~SvlV~~~G~vLLrRGi~~~~~~~~~a~~vd~~~~~pG~I~~r~~~~~~~i 215 (256)
+.++.+..++. ..--|+.+|+.+++-|-+.. +-..+|.+++.+..+.+
T Consensus 75 p~~~lV~~~~~-~V~~V~V~Gk~Vv~dG~~~~--------------iD~~ei~~~~~~~a~kL 122 (123)
T d1p1ma1 75 IKNHLVHAFSG-EVFATMVAGKWIYFDGEYPT--------------IDSEEVKRELARIEKEL 122 (123)
T ss_dssp HHHHHHHTCCS-CCSEEEETTEEEEETTBCTT--------------SCHHHHHHHHHHHHHHH
T ss_pred hHHHHHhccCC-CccEEEECCEEEEECCeEcc--------------cCHHHHHHHHHHHHHHh
Confidence 45666665543 33347889999999996653 33578888877765544
Done!