BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025184
(256 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255570434|ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223534553|gb|EEF36252.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 270
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/270 (76%), Positives = 227/270 (84%), Gaps = 14/270 (5%)
Query: 1 MGTTLFSSCSF--------------LAQISSVENGISRVKAVACSTGSDSVDGVMKRRSV 46
MGTT+F+SCSF L SS E G+SR++A + G++KRRS
Sbjct: 1 MGTTIFTSCSFPWKYHHQQMVPSSHLLGHSSQETGVSRIRATIEPREFEKPIGLLKRRSA 60
Query: 47 LVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGW 106
LVSG SL SS +LGFP DGLA VKQGLLAGR+PGLSEPDEQGWRTYRRPDDKSGGHGVGW
Sbjct: 61 LVSGISLASSTILGFPGDGLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDDKSGGHGVGW 120
Query: 107 SPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDAT 166
SPIIPY F VPQEW+EVPVSIADLGGTEIDLRF+S K+GRLFVIVAPVLRFADDLGD+AT
Sbjct: 121 SPIIPYAFKVPQEWEEVPVSIADLGGTEIDLRFSSSKEGRLFVIVAPVLRFADDLGDNAT 180
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNR 226
IE+IGPPEKVINAFGPEVIGENVEGKVLSM+V E GR YY++ELEPPHVLITATAAGNR
Sbjct: 181 IERIGPPEKVINAFGPEVIGENVEGKVLSMNVAEHSGRMYYQFELEPPHVLITATAAGNR 240
Query: 227 LYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
LYLFSVTGNGLQWKRHY DLK+IA+SFRVV
Sbjct: 241 LYLFSVTGNGLQWKRHYKDLKRIAESFRVV 270
>gi|225457797|ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
vinifera]
gi|302142754|emb|CBI19957.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/279 (73%), Positives = 225/279 (80%), Gaps = 23/279 (8%)
Query: 1 MGTTLFSSCSF-------------LAQISSVENGISRVKAVACSTGSDSVD--------- 38
MGT++F+SCSF SS + G+S KA + + V+
Sbjct: 1 MGTSIFTSCSFSWRNHHHIIPSHRFLSHSSPDKGLSVAKAAVDTRQNGCVEFVDEETEKF 60
Query: 39 -GVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDD 97
G +KRRS +VSG SLISSAVLGFP +GLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPD+
Sbjct: 61 SGFLKRRSAIVSGVSLISSAVLGFPREGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDE 120
Query: 98 KSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRF 157
KSGGHGVGWSPIIPY+FSVP W+EVPVSIADLGGTEIDLRFA+ K+GRLFVIVAPVLRF
Sbjct: 121 KSGGHGVGWSPIIPYIFSVPSGWEEVPVSIADLGGTEIDLRFANSKEGRLFVIVAPVLRF 180
Query: 158 ADDLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVL 217
AD+LGDDA +EKIGPPEKVI AFGPEVIGENVEGKVLSM V E GR YY++ELEPPHVL
Sbjct: 181 ADNLGDDAKVEKIGPPEKVIAAFGPEVIGENVEGKVLSMGVVEHSGRTYYQFELEPPHVL 240
Query: 218 ITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
ITATAAGNRLYLFSVT +GLQWKRHY DLKKIADSFRVV
Sbjct: 241 ITATAAGNRLYLFSVTASGLQWKRHYKDLKKIADSFRVV 279
>gi|224062948|ref|XP_002300943.1| predicted protein [Populus trichocarpa]
gi|222842669|gb|EEE80216.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/276 (73%), Positives = 225/276 (81%), Gaps = 20/276 (7%)
Query: 1 MGTTLFSSCSFL-----AQI--------SSVENGISRVKAVACSTGSDSVDG-------V 40
MGTTL +SC QI S E+ SR K A S + +DG
Sbjct: 1 MGTTLLTSCGIQWRYHHQQIVPDNHLLSHSQESFPSRAKITAESRKNGFLDGENEKSAGF 60
Query: 41 MKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSG 100
+KRRSVLVSG SL+S++VLG +GLAVVKQGLLAGR+PGLSEPD+QGWRTYRRPDDKSG
Sbjct: 61 LKRRSVLVSGVSLVSTSVLGSAGEGLAVVKQGLLAGRIPGLSEPDDQGWRTYRRPDDKSG 120
Query: 101 GHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADD 160
GHGVGWSPIIPYLFSVPQ W+EVPVSIADLGGTEIDLRF S K+GRLFVIVAPVLRFAD
Sbjct: 121 GHGVGWSPIIPYLFSVPQGWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVLRFADY 180
Query: 161 LGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITA 220
LG++ATIE+IGPPEKVINAFGPEVIGENVEGKVLSM+VEE GR+YY+YELEPPH LITA
Sbjct: 181 LGENATIEQIGPPEKVINAFGPEVIGENVEGKVLSMNVEEHSGRRYYQYELEPPHALITA 240
Query: 221 TAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
TAAGNRLYLF+VTGNGLQWKRHY DLK+IA SFRVV
Sbjct: 241 TAAGNRLYLFNVTGNGLQWKRHYQDLKRIAYSFRVV 276
>gi|297842481|ref|XP_002889122.1| thylakoid lumenal 29.8 kDa protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334963|gb|EFH65381.1| thylakoid lumenal 29.8 kDa protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/257 (74%), Positives = 206/257 (80%), Gaps = 2/257 (0%)
Query: 1 MGTTLFSSCSFLAQISSVENGISRVKAVACSTGSDS-VDGVMKRRSVLVSGASLISSAVL 59
M T L C F IS V T D + RRSVL SG SL+SS L
Sbjct: 1 METALLRYC-FNFSSHPYHKKISAHHRVDGETQRDERCATALSRRSVLASGFSLVSSTAL 59
Query: 60 GFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQE 119
FP DGLAVVKQGLLAGRVPGLSEPD++GWRTYRRPD+KSGGHGVGWSPIIPY FSVPQ+
Sbjct: 60 VFPGDGLAVVKQGLLAGRVPGLSEPDDEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQD 119
Query: 120 WDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINA 179
W+EVPVSIADLGGTEIDLRFASPK+GRL VIVAPVLRFAD+LGDD IE IGPP KVINA
Sbjct: 120 WNEVPVSIADLGGTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGPPAKVINA 179
Query: 180 FGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQW 239
FGPEVIGENVEGKVLS +V E GR YY++ELEPPHVLITATAAGNRLYLFSVTGNGLQW
Sbjct: 180 FGPEVIGENVEGKVLSSNVAEHEGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQW 239
Query: 240 KRHYTDLKKIADSFRVV 256
KRHY DLK+IA SFR+V
Sbjct: 240 KRHYKDLKRIASSFRIV 256
>gi|356515973|ref|XP_003526671.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
[Glycine max]
Length = 271
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/276 (68%), Positives = 217/276 (78%), Gaps = 25/276 (9%)
Query: 1 MGTTLFSSCSFLAQ------------ISSVENGISRVKAVACSTGSD-SVDG-------V 40
M TT S+ S L + +++NG R A ++ + S++ +
Sbjct: 1 MATTALSTTSVLCRRKPQHMHIILPSSQTLQNGTLRTDVTASASKDNISIESEKCCSSLL 60
Query: 41 MKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSG 100
+ RR+VL SG SL LGFP + LAVVKQGLLAGR+PGLSEPDEQGWRTYRRPD+KSG
Sbjct: 61 VNRRTVLASGVSL-----LGFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSG 115
Query: 101 GHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADD 160
GHGVGWSPIIPY F VP+EW+EVPVSIADLGGTEIDLRFAS K+GRLFVIVAPVLRF+DD
Sbjct: 116 GHGVGWSPIIPYSFRVPKEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDD 175
Query: 161 LGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITA 220
LGD+ATIEKIGPPEKVINAFGPE+IGENVEGKVLS +V E GR YY++ELEPPH+ ITA
Sbjct: 176 LGDNATIEKIGPPEKVINAFGPEMIGENVEGKVLSANVAEHEGRTYYQFELEPPHIFITA 235
Query: 221 TAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
TAAGNRLYLF VTG+GLQWKRHY DLKKIA+SFRVV
Sbjct: 236 TAAGNRLYLFGVTGSGLQWKRHYDDLKKIAESFRVV 271
>gi|217074038|gb|ACJ85379.1| unknown [Medicago truncatula]
Length = 268
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/251 (73%), Positives = 208/251 (82%), Gaps = 13/251 (5%)
Query: 14 QISSVENGISRVKAVACSTGSDSVDG--------VMKRRSVLVSGASLISSAVLGFPADG 65
Q SV+N +SR + S GS S++ + RR++L SG SL LGFP
Sbjct: 23 QPCSVKNEVSRTMHASVSIGSLSINEESDKCSSLLANRRAILASGVSL-----LGFPGVS 77
Query: 66 LAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPV 125
LAVVKQGLLAGR+PGLSEPDEQGWRTYRRPD+KSGGHGVGWSPIIPY F VPQEW+EVPV
Sbjct: 78 LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYTFKVPQEWEEVPV 137
Query: 126 SIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVI 185
SIADLGGTE+DLRF+S K+GRLFVIVAPVLRF+D +GDDATIEKIGPP+KVI+AFGPE+I
Sbjct: 138 SIADLGGTELDLRFSSSKEGRLFVIVAPVLRFSDIIGDDATIEKIGPPDKVISAFGPEMI 197
Query: 186 GENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTD 245
GENVEGKVLS +V E GR YY++ELEPPH+ ITATAAGNRLYLF VTGNGLQWKRHY D
Sbjct: 198 GENVEGKVLSSNVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGNGLQWKRHYND 257
Query: 246 LKKIADSFRVV 256
LKKI+DSFRVV
Sbjct: 258 LKKISDSFRVV 268
>gi|356509330|ref|XP_003523403.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
[Glycine max]
Length = 267
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/245 (74%), Positives = 206/245 (84%), Gaps = 10/245 (4%)
Query: 17 SVENGISRVKAVACSTG----SDSVDGVM-KRRSVLVSGASLISSAVLGFPADGLAVVKQ 71
+++NG R A + S SD ++ RR++L SG SL+S FP + LAVVKQ
Sbjct: 28 TLQNGTLRTVAASASKDISIESDKCSSLLVNRRTILASGVSLLS-----FPGESLAVVKQ 82
Query: 72 GLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLG 131
GLLAGR+PGLSEPDEQGWRTYRRPD+KSGGHGVGWSPIIPY F VP+EW+EVPVSIADLG
Sbjct: 83 GLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLG 142
Query: 132 GTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG 191
GTEIDLRFAS K+GRLFVIVAPVLRF+DDLGD+ATIEKIGPPEKVINAFGPE+IGENVEG
Sbjct: 143 GTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIGPPEKVINAFGPEMIGENVEG 202
Query: 192 KVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIAD 251
KVLS+ E GR YY++ELEPPH+ ITATAAGNRLYLF VTG+GLQWKRHY DLKKIA+
Sbjct: 203 KVLSVSAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYNDLKKIAE 262
Query: 252 SFRVV 256
SFRVV
Sbjct: 263 SFRVV 267
>gi|449443776|ref|XP_004139653.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
[Cucumis sativus]
gi|449475456|ref|XP_004154459.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 210/267 (78%), Gaps = 11/267 (4%)
Query: 1 MGTTLFSSCSFLA----------QISSVENGISRVKAVACSTGSDSVDGV-MKRRSVLVS 49
MGTTLF + F + + RV AV + + + + RR LVS
Sbjct: 1 MGTTLFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGAHNQNPISSTALNRRWALVS 60
Query: 50 GASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPI 109
G SL+SSA LG D LA VKQGLLAGR+PGLSEPDEQGWRTYRRPD+KSGGHGVGWSPI
Sbjct: 61 GVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPI 120
Query: 110 IPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEK 169
IPY FSVPQ+W+EVPVSIADLGGTEIDLRF S K+GR+FV+VAPV RF+D +G+DATIE
Sbjct: 121 IPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGEDATIEM 180
Query: 170 IGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYL 229
+GPPEKVINAFGPEVIGENVEGKV+SM V E GR YY++ELEPPHV+ITATAAGNRLYL
Sbjct: 181 VGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLYL 240
Query: 230 FSVTGNGLQWKRHYTDLKKIADSFRVV 256
F+VT NGLQWKRHY DLK+IADSFR+V
Sbjct: 241 FNVTANGLQWKRHYNDLKRIADSFRIV 267
>gi|357463687|ref|XP_003602125.1| PsbP domain-containing protein [Medicago truncatula]
gi|355491173|gb|AES72376.1| PsbP domain-containing protein [Medicago truncatula]
Length = 268
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/251 (72%), Positives = 207/251 (82%), Gaps = 13/251 (5%)
Query: 14 QISSVENGISRVKAVACSTGSDSVDG--------VMKRRSVLVSGASLISSAVLGFPADG 65
Q SV+N +SR + S S S++ + RR++L SG SL LGFP
Sbjct: 23 QPCSVKNEVSRTMHASVSIDSLSINEESDKCSSLLANRRAILASGVSL-----LGFPGVS 77
Query: 66 LAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPV 125
LAVVKQGLLAGR+PGLSEPDEQGWRTYRRPD+KSGGHGVGWSPIIPY F VPQEW+EVPV
Sbjct: 78 LAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYTFKVPQEWEEVPV 137
Query: 126 SIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVI 185
SIADLGGTE+DLRF+S K+GRLFVIVAPVLRF+D +GDDATIEKIGPP+KVI+AFGPE+I
Sbjct: 138 SIADLGGTELDLRFSSSKEGRLFVIVAPVLRFSDIIGDDATIEKIGPPDKVISAFGPEMI 197
Query: 186 GENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTD 245
GENVEGKVLS +V E GR YY++ELEPPH+ ITATAAGNRLYLF VTGNGLQWKRHY D
Sbjct: 198 GENVEGKVLSSNVAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGNGLQWKRHYND 257
Query: 246 LKKIADSFRVV 256
LKKI+DSFRVV
Sbjct: 258 LKKISDSFRVV 268
>gi|255646927|gb|ACU23933.1| unknown [Glycine max]
Length = 267
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/245 (73%), Positives = 205/245 (83%), Gaps = 10/245 (4%)
Query: 17 SVENGISRVKAVACSTG----SDSVDGVM-KRRSVLVSGASLISSAVLGFPADGLAVVKQ 71
+++NG R A + S SD ++ RR++L SG SL+S FP + LAVVKQ
Sbjct: 28 TLQNGTLRTVAASASKDISIESDKCSSLLVNRRTILASGVSLLS-----FPGESLAVVKQ 82
Query: 72 GLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLG 131
GLLAGR+PGLSEPDEQGWRTYRRPD+KSGGHGVGWSPIIPY F VP+EW+EVPVSIADLG
Sbjct: 83 GLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLG 142
Query: 132 GTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG 191
GTEIDLRFAS K+GRLFVIVAPVLRF+DDLGD+ATIEKIGPPEKVINAFGPE+IGENVEG
Sbjct: 143 GTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIGPPEKVINAFGPEMIGENVEG 202
Query: 192 KVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIAD 251
KVLS+ E GR YY++ELEPPH+ ITATAAGNRLYLF VTG+G QWKRHY DLKKIA+
Sbjct: 203 KVLSVGAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGFQWKRHYNDLKKIAE 262
Query: 252 SFRVV 256
SFRVV
Sbjct: 263 SFRVV 267
>gi|30699237|ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis thaliana]
gi|190358910|sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic;
AltName: Full=OEC23-like protein 5; Flags: Precursor
gi|332197812|gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis thaliana]
Length = 260
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/260 (71%), Positives = 208/260 (80%), Gaps = 5/260 (1%)
Query: 1 MGTTLFSSC---SFLAQISSVENGISRVKAVACSTGSDS-VDGVMKRRSVLVSGASLISS 56
M T L C S +IS+ + S + + D V+ RRSV+ SG + S+
Sbjct: 2 METALLRYCVNFSGHKKISAHQRSNSEIPKTSPGGCEDEWCARVLSRRSVMASGL-VSST 60
Query: 57 AVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSV 116
L FP +GLAVVKQGLLAGRVPGLSEPDE+GWRTYRRPD+KSGGHGVGWSPIIPY FSV
Sbjct: 61 TALAFPREGLAVVKQGLLAGRVPGLSEPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSV 120
Query: 117 PQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKV 176
PQ+W+EVPVSIADLGGTEIDLRFASPK+GRL VIVAPVLRFAD+LGDD IE IG P KV
Sbjct: 121 PQDWNEVPVSIADLGGTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKV 180
Query: 177 INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNG 236
INAFGPEVIGENVEGKVLS +V E GR YY++ELEPPHVLITATAAGNRLYLFSVTGNG
Sbjct: 181 INAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNG 240
Query: 237 LQWKRHYTDLKKIADSFRVV 256
LQWKRHY DLK+IA SFR+V
Sbjct: 241 LQWKRHYKDLKRIASSFRIV 260
>gi|2829916|gb|AAC00624.1| Unknown protein [Arabidopsis thaliana]
Length = 274
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 176/232 (75%), Positives = 192/232 (82%), Gaps = 16/232 (6%)
Query: 40 VMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQG----------- 88
V+ RRSV+ SG + S+ L FP +GLAVVKQGLLAGRVPGLSEPDE+G
Sbjct: 44 VLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLSEPDEEGSFHSVLDSSSS 102
Query: 89 ----WRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK 144
TYRRPD+KSGGHGVGWSPIIPY FSVPQ+W+EVPVSIADLGGTEIDLRFASPK+
Sbjct: 103 CLALTLTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKE 162
Query: 145 GRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGR 204
GRL VIVAPVLRFAD+LGDD IE IG P KVINAFGPEVIGENVEGKVLS +V E GR
Sbjct: 163 GRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGR 222
Query: 205 KYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
YY++ELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHY DLK+IA SFR+V
Sbjct: 223 LYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 274
>gi|357160588|ref|XP_003578812.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
[Brachypodium distachyon]
Length = 268
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 168/217 (77%), Positives = 183/217 (84%), Gaps = 1/217 (0%)
Query: 40 VMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKS 99
++ RR L S A+ +VLGF DGLAVVKQGLLAGR+PGLSEPDE GWRTYRRPD+KS
Sbjct: 53 LVGRRHALASTAAACGVSVLGFAGDGLAVVKQGLLAGRIPGLSEPDENGWRTYRRPDEKS 112
Query: 100 GGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFAD 159
GGHGVGWSPIIPY F VP W+E PVSIADLGGTEIDLRF +PK+GRL VIVAP RFAD
Sbjct: 113 GGHGVGWSPIIPYSFKVPGGWEETPVSIADLGGTEIDLRFGNPKEGRLSVIVAPTARFAD 172
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLIT 219
+L DDATIEKIG P KVINAFGPEVIGENVEGKVLS E GR YY++ELEPPH+ IT
Sbjct: 173 NL-DDATIEKIGSPAKVINAFGPEVIGENVEGKVLSTATSEYSGRTYYQFELEPPHIFIT 231
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
ATAAGNRLYLFSVT NGLQWKRHY DLK+IA+SFRVV
Sbjct: 232 ATAAGNRLYLFSVTANGLQWKRHYKDLKQIAESFRVV 268
>gi|414878372|tpg|DAA55503.1| TPA: hypothetical protein ZEAMMB73_184948 [Zea mays]
Length = 301
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/250 (71%), Positives = 193/250 (77%), Gaps = 10/250 (4%)
Query: 13 AQISSVENGISRVKAVAC------STGSDSVDGVMKRRSVLVSGASLISSAVLGFPADGL 66
A+ S+V G R AV C S G + +GV ++ ++VLGF GL
Sbjct: 56 AKPSAVAKG--RAAAVTCFSGPSLSVGREDQEGVAVVVGRRALASAAAVASVLGFAGRGL 113
Query: 67 AVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVS 126
A QGLLAGRVPGLSEPDE GWRTYRRPDDKSGGHGVGWSPIIPY F VP WDEVPVS
Sbjct: 114 AA-NQGLLAGRVPGLSEPDENGWRTYRRPDDKSGGHGVGWSPIIPYSFKVPDGWDEVPVS 172
Query: 127 IADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIG 186
IADLGGTEIDLRFA+PK+GRLFVIVAPV RFADDL DDATIEKIG PEKVI AFGPEVIG
Sbjct: 173 IADLGGTEIDLRFANPKEGRLFVIVAPVRRFADDL-DDATIEKIGSPEKVITAFGPEVIG 231
Query: 187 ENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDL 246
ENVEGKVLS + GR YY++ELEPPHV ITATAAGNRLYLFSVT NGLQWKRHY DL
Sbjct: 232 ENVEGKVLSSETAAHSGRTYYQFELEPPHVFITATAAGNRLYLFSVTANGLQWKRHYKDL 291
Query: 247 KKIADSFRVV 256
K+IA SFRVV
Sbjct: 292 KQIAQSFRVV 301
>gi|242085062|ref|XP_002442956.1| hypothetical protein SORBIDRAFT_08g005430 [Sorghum bicolor]
gi|241943649|gb|EES16794.1| hypothetical protein SORBIDRAFT_08g005430 [Sorghum bicolor]
Length = 271
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/204 (81%), Positives = 177/204 (86%), Gaps = 2/204 (0%)
Query: 53 LISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPY 112
+ S+ VLGF GLA QGLLAGR+PGLSEPDE GWRTYRRPDDKSGGHGVGWSPIIPY
Sbjct: 70 VCSAPVLGFAGLGLAAT-QGLLAGRIPGLSEPDENGWRTYRRPDDKSGGHGVGWSPIIPY 128
Query: 113 LFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGP 172
F VP WDEVPVSIADLGGTEIDLRFA+PK+GR FVIVAPV RFADDL DDATIEKIG
Sbjct: 129 SFKVPDGWDEVPVSIADLGGTEIDLRFANPKEGRCFVIVAPVRRFADDL-DDATIEKIGN 187
Query: 173 PEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSV 232
PEKVI+AFGPEVIGENVEGKVLS E GR YY++ELEPPHV ITATAAGNRLYLFSV
Sbjct: 188 PEKVISAFGPEVIGENVEGKVLSSATAEYSGRTYYQFELEPPHVFITATAAGNRLYLFSV 247
Query: 233 TGNGLQWKRHYTDLKKIADSFRVV 256
T NGLQWKRHY DLK+IA+SFRVV
Sbjct: 248 TANGLQWKRHYKDLKQIAESFRVV 271
>gi|223950239|gb|ACN29203.1| unknown [Zea mays]
Length = 259
Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 179/250 (71%), Positives = 193/250 (77%), Gaps = 10/250 (4%)
Query: 13 AQISSVENGISRVKAVAC------STGSDSVDGVMKRRSVLVSGASLISSAVLGFPADGL 66
A+ S+V G R AV C S G + +GV ++ ++VLGF GL
Sbjct: 14 AKPSAVAKG--RAAAVTCFSGPSLSVGREDQEGVAVVVGRRALASAAAVASVLGFAGRGL 71
Query: 67 AVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVS 126
A QGLLAGRVPGLSEPDE GWRTYRRPDDKSGGHGVGWSPIIPY F VP WDEVPVS
Sbjct: 72 AA-NQGLLAGRVPGLSEPDENGWRTYRRPDDKSGGHGVGWSPIIPYSFKVPDGWDEVPVS 130
Query: 127 IADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIG 186
IADLGGTEIDLRFA+PK+GRLFVIVAPV RFADDL DDATIEKIG PEKVI AFGPEVIG
Sbjct: 131 IADLGGTEIDLRFANPKEGRLFVIVAPVRRFADDL-DDATIEKIGSPEKVITAFGPEVIG 189
Query: 187 ENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDL 246
ENVEGKVLS + GR YY++ELEPPHV ITATAAGNRLYLFSVT NGLQWKRHY DL
Sbjct: 190 ENVEGKVLSSETAAHSGRTYYQFELEPPHVFITATAAGNRLYLFSVTANGLQWKRHYKDL 249
Query: 247 KKIADSFRVV 256
K+IA SFRVV
Sbjct: 250 KQIAQSFRVV 259
>gi|115487706|ref|NP_001066340.1| Os12g0190200 [Oryza sativa Japonica Group]
gi|108862277|gb|ABA96031.2| thylakoid lumenal 29.8 kDa protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113648847|dbj|BAF29359.1| Os12g0190200 [Oryza sativa Japonica Group]
gi|215765642|dbj|BAG87339.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 201/263 (76%), Gaps = 14/263 (5%)
Query: 5 LFSSCSFLAQ--ISSVENGISRVKAVACSTG---------SDSVDGVMKRRSVLVSGASL 53
L SS FL + + + + S AV CS+G D V +M RR + S A+
Sbjct: 14 LPSSSLFLTKQLVPATKGRASAAAAVRCSSGPNLSEAHEEEDGVASLMGRRHAMASAAAA 73
Query: 54 ISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYL 113
+V GF + +AV KQGLLAGR+PGLS+PDE+GWRTYRRPDDKSGGHGVGWSPIIPY
Sbjct: 74 CGVSVFGFAGESMAV-KQGLLAGRIPGLSDPDEKGWRTYRRPDDKSGGHGVGWSPIIPYS 132
Query: 114 FSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPP 173
F V W+EVPVSIADLGGTEIDLRFA+ K+GRLFV+VAPV RFA+ DDATIEKIG P
Sbjct: 133 FKVRDGWEEVPVSIADLGGTEIDLRFANSKQGRLFVVVAPVRRFAEL--DDATIEKIGTP 190
Query: 174 EKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVT 233
EKVI+AFGPEVIGENVEGKVLSM E GR YY++ELEPPH+ ITATAAGNRLYLF+VT
Sbjct: 191 EKVIDAFGPEVIGENVEGKVLSMATAEYSGRTYYQFELEPPHIFITATAAGNRLYLFNVT 250
Query: 234 GNGLQWKRHYTDLKKIADSFRVV 256
NGLQWKR+Y DLK+IA+SFRVV
Sbjct: 251 ANGLQWKRNYNDLKQIAESFRVV 273
>gi|222616759|gb|EEE52891.1| hypothetical protein OsJ_35474 [Oryza sativa Japonica Group]
Length = 268
Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 201/263 (76%), Gaps = 14/263 (5%)
Query: 5 LFSSCSFLAQ--ISSVENGISRVKAVACSTG---------SDSVDGVMKRRSVLVSGASL 53
L SS FL + + + + S AV CS+G D V +M RR + S A+
Sbjct: 9 LPSSSLFLTKQLVPATKGRASAAAAVRCSSGPNLSEAHEEEDGVASLMGRRHAMASAAAA 68
Query: 54 ISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYL 113
+V GF + +AV KQGLLAGR+PGLS+PDE+GWRTYRRPDDKSGGHGVGWSPIIPY
Sbjct: 69 CGVSVFGFAGESMAV-KQGLLAGRIPGLSDPDEKGWRTYRRPDDKSGGHGVGWSPIIPYS 127
Query: 114 FSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPP 173
F V W+EVPVSIADLGGTEIDLRFA+ K+GRLFV+VAPV RFA+ DDATIEKIG P
Sbjct: 128 FKVRDGWEEVPVSIADLGGTEIDLRFANSKQGRLFVVVAPVRRFAEL--DDATIEKIGTP 185
Query: 174 EKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVT 233
EKVI+AFGPEVIGENVEGKVLSM E GR YY++ELEPPH+ ITATAAGNRLYLF+VT
Sbjct: 186 EKVIDAFGPEVIGENVEGKVLSMATAEYSGRTYYQFELEPPHIFITATAAGNRLYLFNVT 245
Query: 234 GNGLQWKRHYTDLKKIADSFRVV 256
NGLQWKR+Y DLK+IA+SFRVV
Sbjct: 246 ANGLQWKRNYNDLKQIAESFRVV 268
>gi|326496951|dbj|BAJ98502.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509899|dbj|BAJ87165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 160/200 (80%), Positives = 172/200 (86%), Gaps = 1/200 (0%)
Query: 57 AVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSV 116
+VLGF DGLA KQG LAGR+PGLS PD+ GWRTYRRPD+KSGGHGVGWSPIIPY F V
Sbjct: 77 SVLGFAGDGLAAAKQGPLAGRIPGLSGPDQNGWRTYRRPDEKSGGHGVGWSPIIPYSFKV 136
Query: 117 PQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKV 176
P W+E PVSIADLGGTEIDLRF +PK+GRL VIVAP RFADDL DDATIEKIG PEKV
Sbjct: 137 PDGWEETPVSIADLGGTEIDLRFGNPKEGRLSVIVAPTRRFADDL-DDATIEKIGTPEKV 195
Query: 177 INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNG 236
INAFGPEVIGENVEGKVLS E GR YY++ELEPPH+ ITATAAGNRLYLFSVT NG
Sbjct: 196 INAFGPEVIGENVEGKVLSTATAEYSGRTYYQFELEPPHIFITATAAGNRLYLFSVTANG 255
Query: 237 LQWKRHYTDLKKIADSFRVV 256
LQWKRHY DLK+IA+SFRVV
Sbjct: 256 LQWKRHYKDLKQIAESFRVV 275
>gi|125536023|gb|EAY82511.1| hypothetical protein OsI_37728 [Oryza sativa Indica Group]
Length = 268
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 200/263 (76%), Gaps = 14/263 (5%)
Query: 5 LFSSCSFLAQ--ISSVENGISRVKAVACSTG---------SDSVDGVMKRRSVLVSGASL 53
L SS FL + + + + S AV CS+G D V +M RR + S A+
Sbjct: 9 LPSSSLFLTKQLVPATKGRASAAAAVRCSSGPNLSEAHEEEDGVASLMGRRHAMASAAAA 68
Query: 54 ISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYL 113
+V GF + AV KQGLLAGR+PGLS+PDE+GWRTYRRPDDKSGGHGVGWSPIIPY
Sbjct: 69 CGVSVFGFAGESTAV-KQGLLAGRIPGLSDPDEKGWRTYRRPDDKSGGHGVGWSPIIPYS 127
Query: 114 FSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPP 173
F V W+EVPVSIADLGGTEIDLRFA+ K+GRLFV+VAPV RFA+ DDATIEKIG P
Sbjct: 128 FKVRDGWEEVPVSIADLGGTEIDLRFANSKQGRLFVVVAPVRRFAEL--DDATIEKIGTP 185
Query: 174 EKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVT 233
EKVI+AFGPEVIGENVEGKVLSM E GR YY++ELEPPH+ ITATAAGNRLYLF+VT
Sbjct: 186 EKVIDAFGPEVIGENVEGKVLSMATAEYSGRTYYQFELEPPHIFITATAAGNRLYLFNVT 245
Query: 234 GNGLQWKRHYTDLKKIADSFRVV 256
NGLQWKR+Y DLK+IA+SFRVV
Sbjct: 246 ANGLQWKRNYNDLKQIAESFRVV 268
>gi|226505752|ref|NP_001148422.1| LOC100282037 [Zea mays]
gi|195619184|gb|ACG31422.1| tat pathway signal sequence family protein [Zea mays]
gi|414878370|tpg|DAA55501.1| TPA: tat pathway signal sequence family protein [Zea mays]
Length = 170
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/169 (85%), Positives = 150/169 (88%), Gaps = 1/169 (0%)
Query: 88 GWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRL 147
GWRTYRRPDDKSGGHGVGWSPIIPY F VP WDEVPVSIADLGGTEIDLRFA+PK+GRL
Sbjct: 3 GWRTYRRPDDKSGGHGVGWSPIIPYSFKVPDGWDEVPVSIADLGGTEIDLRFANPKEGRL 62
Query: 148 FVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYY 207
FVIVAPV RFADDL DDATIEKIG PEKVI AFGPEVIGENVEGKVLS + GR YY
Sbjct: 63 FVIVAPVRRFADDL-DDATIEKIGSPEKVITAFGPEVIGENVEGKVLSSETAAHSGRTYY 121
Query: 208 RYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
++ELEPPHV ITATAAGNRLYLFSVT NGLQWKRHY DLK+IA SFRVV
Sbjct: 122 QFELEPPHVFITATAAGNRLYLFSVTANGLQWKRHYKDLKQIAQSFRVV 170
>gi|108862278|gb|ABA96032.2| thylakoid lumenal 29.8 kDa protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 171
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/171 (79%), Positives = 150/171 (87%), Gaps = 2/171 (1%)
Query: 86 EQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKG 145
+ GWRTYRRPDDKSGGHGVGWSPIIPY F V W+EVPVSIADLGGTEIDLRFA+ K+G
Sbjct: 3 KTGWRTYRRPDDKSGGHGVGWSPIIPYSFKVRDGWEEVPVSIADLGGTEIDLRFANSKQG 62
Query: 146 RLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRK 205
RLFV+VAPV RFA+ DDATIEKIG PEKVI+AFGPEVIGENVEGKVLSM E GR
Sbjct: 63 RLFVVVAPVRRFAEL--DDATIEKIGTPEKVIDAFGPEVIGENVEGKVLSMATAEYSGRT 120
Query: 206 YYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
YY++ELEPPH+ ITATAAGNRLYLF+VT NGLQWKR+Y DLK+IA+SFRVV
Sbjct: 121 YYQFELEPPHIFITATAAGNRLYLFNVTANGLQWKRNYNDLKQIAESFRVV 171
>gi|168021111|ref|XP_001763085.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685568|gb|EDQ71962.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 307
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 158/207 (76%), Gaps = 15/207 (7%)
Query: 64 DGLAVVKQGLLAGRVPGLSEPDEQG---------------WRTYRRPDDKSGGHGVGWSP 108
+ + V+Q LLAGR+PGLSEPD G RTYRRPD KSGGHGVGWSP
Sbjct: 100 ENASAVQQTLLAGRIPGLSEPDSNGTVNSCICILLYCIYRLRTYRRPDGKSGGHGVGWSP 159
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIE 168
+ PY F VPQ+W+E+PVSIADLGGTEIDLRF + ++G + V+VAPVLRF+ +GD+ATIE
Sbjct: 160 MTPYSFKVPQDWEEIPVSIADLGGTEIDLRFQNAQEGNISVVVAPVLRFSSTIGDNATIE 219
Query: 169 KIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLY 228
+G PEKVI+AFGPE+IG+NVEGKV MDVE+ GR YY++EL+ PH LI ATAAGNRLY
Sbjct: 220 AVGSPEKVISAFGPEIIGQNVEGKVKDMDVEQYDGRTYYQFELDAPHTLIAATAAGNRLY 279
Query: 229 LFSVTGNGLQWKRHYTDLKKIADSFRV 255
LFSV+ NG QWK+H LK+I SFRV
Sbjct: 280 LFSVSANGRQWKKHAPGLKEIMKSFRV 306
>gi|13926195|gb|AAK49577.1|AF370571_1 Unknown protein [Arabidopsis thaliana]
Length = 253
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 152/194 (78%), Gaps = 1/194 (0%)
Query: 40 VMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKS 99
V+ RRS + SG S+ L FP +GLA VKQGLLAGR GL+EPDE+GWRTYRRPD+K
Sbjct: 44 VLSRRSGMASGLD-SSTTGLAFPREGLADVKQGLLAGRETGLNEPDEEGWRTYRRPDEKL 102
Query: 100 GGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFAD 159
GGHG GW IIPY F+ ++ +E P SIADL GTE+D R SPK+ RL VIVAPVLRFAD
Sbjct: 103 GGHGDGWRTIIPYAFAGAEDCNEAPASIADLAGTEMDWRCGSPKQARLSVIVAPVLRFAD 162
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLIT 219
+LGDD IE IG P KVINAFGPEVIGENVEGKVLS +V E GR YY++ELEPPHVLIT
Sbjct: 163 NLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFELEPPHVLIT 222
Query: 220 ATAAGNRLYLFSVT 233
ATAAGNRL LFSV
Sbjct: 223 ATAAGNRLCLFSVN 236
>gi|302806593|ref|XP_002985046.1| hypothetical protein SELMODRAFT_121443 [Selaginella moellendorffii]
gi|302809061|ref|XP_002986224.1| hypothetical protein SELMODRAFT_123695 [Selaginella moellendorffii]
gi|300146083|gb|EFJ12755.1| hypothetical protein SELMODRAFT_123695 [Selaginella moellendorffii]
gi|300147256|gb|EFJ13921.1| hypothetical protein SELMODRAFT_121443 [Selaginella moellendorffii]
Length = 169
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 141/168 (83%), Gaps = 1/168 (0%)
Query: 88 GWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRL 147
G RTYRRPD+KSGGHGVGWSP+IPY F VPQ W EVPVSIADLGGTEIDLRFAS ++G +
Sbjct: 2 GIRTYRRPDEKSGGHGVGWSPMIPYSFRVPQNWQEVPVSIADLGGTEIDLRFASSEEGSI 61
Query: 148 FVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYY 207
V+VAPV RF+D + D+A IE+IGPPEKVI+AFGPEV G+N+EG V M+V++ GR YY
Sbjct: 62 AVVVAPVRRFSDTIDDNAKIEEIGPPEKVIDAFGPEVTGKNIEGSVKDMEVKQYDGRTYY 121
Query: 208 RYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+YELE PHVLITATAAGNRLYL SV +GLQW++H +L+ I DSFRV
Sbjct: 122 QYELE-PHVLITATAAGNRLYLMSVNASGLQWRKHARELRSIQDSFRV 168
>gi|159470187|ref|XP_001693241.1| hypothetical protein CHLREDRAFT_205900 [Chlamydomonas reinhardtii]
gi|158277499|gb|EDP03267.1| predicted protein [Chlamydomonas reinhardtii]
Length = 262
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 9/237 (3%)
Query: 23 SRVKAVACSTGSDSVDGVMKRRSVLVS-GASLISSAVLGFPADGLAVVKQGLLAGRVPGL 81
SR V C M RR L+S ASL S + PA+ + QGL AGR+PG
Sbjct: 27 SRSHVVRCDAQQHDGQIAMTRRDALLSVAASLALSGTVALPANAV----QGLTAGRIPGR 82
Query: 82 S-EPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFA 140
+ EPD +G+ TY RP+ KSGGHGVGWS I Y F VP WDE+PVSIADLGGTEIDLR+
Sbjct: 83 TKEPDAEGFYTYTRPEGKSGGHGVGWSEIPQYSFKVPAGWDEIPVSIADLGGTEIDLRYQ 142
Query: 141 SPKKGRLFVIVAPVLRFAD-DLGDDATIEKIGPPEKVINAFGPEVIGENV-EGKVLSMDV 198
+ ++G + V+VAPVLRF D T++++GPP++VI FGPE+ G+ + E V+ +V
Sbjct: 143 AKEQGDVAVVVAPVLRFMDVGFNAKVTLKEVGPPQRVIEGFGPELFGKPLDEDDVVKTEV 202
Query: 199 EELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
E G YY++EL+ H L++ATA NR+++ +VT N QWK+H +L+ I SFRV
Sbjct: 203 VEHDGGLYYKWELK-NHYLVSATATKNRVFILTVTSNARQWKKHSDNLRVIQQSFRV 258
>gi|307104197|gb|EFN52452.1| hypothetical protein CHLNCDRAFT_36808 [Chlorella variabilis]
Length = 264
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 128/187 (68%), Gaps = 3/187 (1%)
Query: 71 QGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADL 130
QGL+AGR+PG++ PD +G+ TY RP+ KSGGHGVGWS I Y F VP+ W+EVPVSIADL
Sbjct: 73 QGLIAGRIPGVTGPDSEGYMTYTRPEGKSGGHGVGWSEIQRYSFKVPESWEEVPVSIADL 132
Query: 131 GGTEIDLRFASPKKGRLFVIVAPVLRFAD-DLGDDATIEKIGPPEKVINAFGPEVIGENV 189
GGTEIDLR+ S ++G L V+VAPVLRF + + + T+ + PPE +I F PE+ G +
Sbjct: 133 GGTEIDLRYGSREEGSLMVVVAPVLRFKEVGINANITVRDLAPPENIIAGFAPELFGSPL 192
Query: 190 -EGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKK 248
E VL M V E G YY YEL H L+ ATA GNRLY+ +V N LQW++ L K
Sbjct: 193 QEEDVLDMQVLEKGGLPYYLYELT-RHRLVAATATGNRLYMLAVKSNSLQWRKSGGKLTK 251
Query: 249 IADSFRV 255
I DSF V
Sbjct: 252 IRDSFAV 258
>gi|302837554|ref|XP_002950336.1| hypothetical protein VOLCADRAFT_74648 [Volvox carteri f.
nagariensis]
gi|300264341|gb|EFJ48537.1| hypothetical protein VOLCADRAFT_74648 [Volvox carteri f.
nagariensis]
Length = 275
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 134/191 (70%), Gaps = 7/191 (3%)
Query: 71 QGLLAGRVPGLS-EPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIAD 129
QGL+AGR+PGLS +PDE G+ Y RP+ KSGGHGVGWS I Y F VP+ WDE+PVSIAD
Sbjct: 82 QGLIAGRIPGLSKQPDEDGFYMYTRPEGKSGGHGVGWSEIPQYQFKVPKGWDEIPVSIAD 141
Query: 130 LGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDA---TIEKIGPPEKVINAFGPEVIG 186
LGGTEIDLR+ + ++G + V+VAPVLR D +G T+ ++GPP++VI F PE+ G
Sbjct: 142 LGGTEIDLRYQNKEQGDVAVVVAPVLRLIDQVGPRVVKITLREVGPPQRVIEGFAPELFG 201
Query: 187 ENV-EGKVLSMDVE-ELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYT 244
+ EG VL+ +V G YY +EL+ PH L+ ATA NR+++ +VT N QWK+H
Sbjct: 202 RPLDEGDVLNTEVAVREDGGLYYLWELK-PHNLVAATATKNRVFILTVTSNARQWKKHAD 260
Query: 245 DLKKIADSFRV 255
+L+ I SFRV
Sbjct: 261 ELRVIQKSFRV 271
>gi|302754552|ref|XP_002960700.1| hypothetical protein SELMODRAFT_74144 [Selaginella moellendorffii]
gi|302823358|ref|XP_002993332.1| hypothetical protein SELMODRAFT_136943 [Selaginella moellendorffii]
gi|300138841|gb|EFJ05594.1| hypothetical protein SELMODRAFT_136943 [Selaginella moellendorffii]
gi|300171639|gb|EFJ38239.1| hypothetical protein SELMODRAFT_74144 [Selaginella moellendorffii]
Length = 134
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 111/134 (82%), Gaps = 1/134 (0%)
Query: 122 EVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFG 181
+VPVSIADLGGTEIDLRF+S ++G + ++VAPV RF+D + D+ATIE+IG P+KVI AFG
Sbjct: 1 QVPVSIADLGGTEIDLRFSSTEEGNIAIVVAPVKRFSDTIADNATIEEIGAPDKVIYAFG 60
Query: 182 PEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKR 241
PE+ G+NVEG V M+V++ GR YY+YE+E PH+LITATAAGNRLYL SV NGLQW++
Sbjct: 61 PEITGKNVEGAVKDMEVKKYEGRTYYQYEVE-PHILITATAAGNRLYLMSVNANGLQWRK 119
Query: 242 HYTDLKKIADSFRV 255
H L++I DSFRV
Sbjct: 120 HAPVLRRIQDSFRV 133
>gi|414878371|tpg|DAA55502.1| TPA: hypothetical protein ZEAMMB73_184948 [Zea mays]
Length = 217
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 115/164 (70%), Gaps = 9/164 (5%)
Query: 13 AQISSVENGISRVKAVAC------STGSDSVDGVMKRRSVLVSGASLISSAVLGFPADGL 66
A+ S+V G R AV C S G + +GV ++ ++VLGF GL
Sbjct: 56 AKPSAVAKG--RAAAVTCFSGPSLSVGREDQEGVAVVVGRRALASAAAVASVLGFAGRGL 113
Query: 67 AVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVS 126
A QGLLAGRVPGLSEPDE GWRTYRRPDDKSGGHGVGWSPIIPY F VP WDEVPVS
Sbjct: 114 AA-NQGLLAGRVPGLSEPDENGWRTYRRPDDKSGGHGVGWSPIIPYSFKVPDGWDEVPVS 172
Query: 127 IADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKI 170
IADLGGTEIDLRFA+PK+GRLFVIVAPV RFA +L + +++
Sbjct: 173 IADLGGTEIDLRFANPKEGRLFVIVAPVRRFAGELRPEQNAQEM 216
>gi|384251295|gb|EIE24773.1| putative thylakoid lumenal 29.8 kDa protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 172
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
Query: 88 GWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRL 147
G++TY RP+ KSGGHGVGWS I Y F VP+ W+E PVSIADLGGTEIDLRF++ +G L
Sbjct: 1 GYQTYVRPEGKSGGHGVGWSEIPRYSFKVPKGWEETPVSIADLGGTEIDLRFSNKDQGSL 60
Query: 148 FVIVAPVLRFAD-DLGDDATIEKIGPPEKVINAFGPEVIGENV-EGKVLSMDVEELCGRK 205
++VAP+LRF D D IE++GPPEK+I+ F PE+ G + E V+ + +
Sbjct: 61 AIVVAPILRFIDVGFNADVRIEEVGPPEKLISGFAPELFGAPLSEDDVMGQTITKKNNLT 120
Query: 206 YYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
YYR+EL+ PH L+ ATA NR++L ++ NG QW++ +DL+ + +SF +V
Sbjct: 121 YYRWELK-PHRLVAATAYKNRMFLIAIQANGRQWRKAESDLRHVQESFDIV 170
>gi|145342154|ref|XP_001416158.1| thylakoid lumenal 30 kDa protein, probable [Ostreococcus
lucimarinus CCE9901]
gi|144576383|gb|ABO94451.1| thylakoid lumenal 30 kDa protein, probable [Ostreococcus
lucimarinus CCE9901]
Length = 267
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 135/226 (59%), Gaps = 10/226 (4%)
Query: 34 SDSVDGVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYR 93
++ ++ ++ RR V V+ +I PA + G+ AGRVPG ++ D G+R Y
Sbjct: 46 TEDMERIVSRRYV-VTSTLVIGQLTRALPAKAV----MGMTAGRVPGFAKADTNGFRVYT 100
Query: 94 RPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAP 153
RP+ KSGGHGVGWS I PY F + W E PVSIAD GTEID +F S G L +I+AP
Sbjct: 101 RPEAKSGGHGVGWSEITPYSFQANESWRETPVSIADPAGTEIDAKFVSDSDGELKIILAP 160
Query: 154 VLRFAD--DLGDDATIEKIGPPEKVINAFGPEVIGENVEGK-VLSMDVEELCGRKYYRYE 210
+LRF+D DL D I+++ I FGPE++G ++ + +LS + ++ R YY YE
Sbjct: 161 ILRFSDKGDL-DTIDIKELVSLNAFIKGFGPELLGNPIQDENILSAEEIQVKDRTYYIYE 219
Query: 211 LEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
L H L++AT R+Y+ ++T N LQW++ ++ + SF+V+
Sbjct: 220 L-ANHSLVSATTWNKRVYICAITCNSLQWRKSKSNNISVLKSFQVL 264
>gi|308800508|ref|XP_003075035.1| Tl30 thylakoid lumenal 30 kDa protein, probable (IC) [Ostreococcus
tauri]
gi|119358862|emb|CAL52307.2| Tl30 thylakoid lumenal 30 kDa protein, probable (IC) [Ostreococcus
tauri]
Length = 266
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 141/253 (55%), Gaps = 20/253 (7%)
Query: 16 SSVENGISRVKAVACSTGSDSV-----------DGVMKRRSVLVSGASLISSAVLGFPAD 64
++V + R VA ++ DS+ + V +R + S +SL+ V PA
Sbjct: 17 TAVRRQLQRTPRVASNSDGDSIKTQAKMQQAQGENVSRRLLGISSASSLVYMGVA--PAK 74
Query: 65 GLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVP 124
+ G+ AGRVPG S+ D++G+R Y RP++KSGGHGVGWS I PY F + W E P
Sbjct: 75 AI----MGMTAGRVPGFSKVDDEGFRVYSRPEEKSGGHGVGWSEITPYSFRAIESWREAP 130
Query: 125 VSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDAT-IEKIGPPEKVINAFGPE 183
VSIAD GTEID +F S G L +I+AP+ RF++ + D ++++ E I F PE
Sbjct: 131 VSIADPAGTEIDAKFVSESDGVLKIILAPIARFSNKVETDVIDLKELVSLENFIKGFAPE 190
Query: 184 VIGENV-EGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRH 242
++G V E +++S ++ G YY +EL H L++ATA R+Y+ VT N LQW++
Sbjct: 191 LVGRPVQEDEIVSSSEFDMNGITYYNHEL-ADHSLVSATARNKRVYICLVTCNSLQWRKS 249
Query: 243 YTDLKKIADSFRV 255
+ SF V
Sbjct: 250 KDRNLALLHSFAV 262
>gi|412988623|emb|CCO17959.1| predicted protein [Bathycoccus prasinos]
Length = 283
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 132/222 (59%), Gaps = 10/222 (4%)
Query: 43 RRSVLVSGASL-----ISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDD 97
RR L++ +L +L P AV+ G +AGRVPG + +E G TY RP+
Sbjct: 63 RREQLLNATALGVLLSFQGGLLVSPPPAQAVM--GSIAGRVPGFGKIEEDGSMTYTRPEA 120
Query: 98 KSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRF 157
KSGGHG+GW+ I PY + + W+EV VSIAD GGTEID RF S +G + +++APVLRF
Sbjct: 121 KSGGHGIGWTEITPYSVKLREGWEEVAVSIADPGGTEIDTRFKSESEGDVKIVLAPVLRF 180
Query: 158 AD-DLGDDATIEKIGPPEKVINAFGPEVIGENV-EGKVLSMDVEELCGRKYYRYEL-EPP 214
A+ + G++ TIE++ P I F PEV+G+ V E ++ SM+ + G +Y YE+
Sbjct: 181 ANVEDGENPTIEELVPITNFILGFAPEVLGQPVNEEQIKSMEKDTRNGLTHYNYEISNEA 240
Query: 215 HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
H LI+AT R+YL SV +G QW+ L+ SF V+
Sbjct: 241 HWLISATVWKKRVYLCSVKASGRQWRTAQPKLRDTIASFTVL 282
>gi|255070273|ref|XP_002507218.1| predicted protein [Micromonas sp. RCC299]
gi|226522493|gb|ACO68476.1| predicted protein [Micromonas sp. RCC299]
Length = 261
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 6/212 (2%)
Query: 50 GASLISSAVLGFPADGL---AVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGW 106
GA ++ + AD A G+ AGRVPGLS + G R Y RP+ KSGGHGVGW
Sbjct: 47 GAISLAGTIFSLTADPTVQPASAVMGMTAGRVPGLSPANADGVRHYTRPEGKSGGHGVGW 106
Query: 107 SPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFAD-DLGDDA 165
+ I PY F V W+EVPVSIAD GGTEID RF+S + G L V++APVLRFA+ D G +
Sbjct: 107 TEITPYSFDVYDGWEEVPVSIADPGGTEIDARFSSEQDGGLKVVLAPVLRFANIDEGLNP 166
Query: 166 TIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYELEPPHVLITATAAG 224
TIE++ P E+ + FGPE+ VE ++ VE+ YY +EL H L+ AT
Sbjct: 167 TIEELIPLERFMAGFGPELTQSPVEEVDIIDKFVEKRGVLTYYNFELR-DHTLVAATVWK 225
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
R+++ + + QW+ L+ SF ++
Sbjct: 226 KRVFIICIKASARQWRNSAEKLRNTMKSFNIL 257
>gi|303274288|ref|XP_003056466.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462550|gb|EEH59842.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 185
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 7/186 (3%)
Query: 72 GLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLG 131
G+ AGRVPGLS D G R Y RP+ KSGGHGVGW+ I PY F V + W+EVPVSIAD G
Sbjct: 2 GMTAGRVPGLSPTDTNGIRRYYRPEGKSGGHGVGWTEITPYTFDVYEGWEEVPVSIADPG 61
Query: 132 GTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG 191
GTEID RF S G L +++APVL+ G++ IE++ P ++ ++ FGPE+ VE
Sbjct: 62 GTEIDARFNSDLDGGLKIVLAPVLQ-----GENPGIEELIPIDRFMSGFGPELTQNPVEA 116
Query: 192 -KVLSMDVEELCGRKYYRYELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIA 250
++ + + G KYY +EL H L+ AT R+++ + W+ L+K
Sbjct: 117 DDIIDVSTDVRSGLKYYNFELR-NHTLVAATVWKKRVFIMCLQAPPRLWRNSAEKLRKTM 175
Query: 251 DSFRVV 256
SF V+
Sbjct: 176 KSFTVL 181
>gi|55792483|gb|AAV65340.1| plastid thylakoid lumenal 29-like protein [Prototheca wickerhamii]
Length = 246
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 111/184 (60%), Gaps = 9/184 (4%)
Query: 27 AVACSTGSDSVDGV-MKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSE-P 84
A T +DS+DG + RR L A+L++ + LAV QGL AGR+PG+S
Sbjct: 68 AAQSGTSNDSLDGFEVGRRQAL---AALVTVPAILQANAALAV--QGLTAGRIPGVSSTA 122
Query: 85 DEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK 144
D G+ Y RP+ KSGGHGVGWS + Y F V W+E PVSIADLGGTEIDLRFA P++
Sbjct: 123 DADGFYRYTRPEGKSGGHGVGWSEMPRYTFKVRPGWEETPVSIADLGGTEIDLRFACPEE 182
Query: 145 GRLFVIVAPVLRFAD-DLGDDATIEKIGPPEKVINAFGPEVIGENVEGK-VLSMDVEELC 202
G L V+VAPVLRFAD D I + PE +I+ F PE+ G ++ + VL V E
Sbjct: 183 GSLQVVVAPVLRFADVGYNADVRITDLNKPENIISGFAPELFGRPLDDEDVLEQRVLEKE 242
Query: 203 GRKY 206
G Y
Sbjct: 243 GVPY 246
>gi|168045858|ref|XP_001775393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673338|gb|EDQ59863.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 281
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 21/162 (12%)
Query: 109 IIPYLFSVPQEWDEVPVSIAD-LGGTE---------IDLRFASPKKGRLFVIVAPVLRFA 158
+ PY F +P W PV +A+ L G ++++F + K+G + V+V+P++R
Sbjct: 122 VKPYKFILPPAWK--PVRVANILSGNYCQPKCAEPWVEVKFENAKEGTVQVVVSPMVRLT 179
Query: 159 DDLGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP--- 214
+ +A+IE+IGPPEK+I+A GP V G + + +VL VE+ YY Y+LE P
Sbjct: 180 NKA--NASIEEIGPPEKIISALGPFVTGNSFDPDEVLETSVEKKGDLTYYNYQLETPFAL 237
Query: 215 ---HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSF 253
H L ATA+GN + LF V+ + QW L+ + +SF
Sbjct: 238 TGAHNLAAATASGNVVLLFVVSASDKQWASSQDLLRTVLESF 279
>gi|297816988|ref|XP_002876377.1| thylakoid lumenal 20 kDa protein [Arabidopsis lyrata subsp. lyrata]
gi|297322215|gb|EFH52636.1| thylakoid lumenal 20 kDa protein [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 21/164 (12%)
Query: 109 IIPYLFSVPQEWDEVPVSIAD-LGGTE---------IDLRFASPKKGRLFVIVAPVLRFA 158
+ PY F +P W ++ IA+ L G I+++F + K+G++ V+ +P++R
Sbjct: 103 VQPYQFVLPPNWKQL--RIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLT 160
Query: 159 DDLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYELEPP--- 214
+ +ATIE IG PEKVI + GP V G + + ++L +E++ + YY+Y LE P
Sbjct: 161 NK--PNATIEDIGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFAL 218
Query: 215 ---HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF V+ QW+ L+ I DSF++
Sbjct: 219 TGSHNLAKATAKGNTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262
>gi|357509231|ref|XP_003624904.1| PsbP domain-containing protein [Medicago truncatula]
gi|124361218|gb|ABN09190.1| hypothetical protein MtrDRAFT_AC183371g14v1 [Medicago truncatula]
gi|355499919|gb|AES81122.1| PsbP domain-containing protein [Medicago truncatula]
Length = 259
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 109 IIPYLFSVPQEWDEVPVSIAD-LGGTE---------IDLRFASPKKGRLFVIVAPVLRFA 158
+ PY F +P W ++ IA+ L G ++++F K+G++ V+ +P++R
Sbjct: 100 VQPYQFILPPTWKQL--RIANILSGNYCQPKCAEPWVEVKFEDEKQGKIQVVASPLIRLT 157
Query: 159 DDLGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP--- 214
+ +ATIE IG PEK+I + GP V G ++ ++L VE++ + YY+Y LE P
Sbjct: 158 NK--PNATIEDIGSPEKLIASLGPFVTGNTLDPDELLEASVEKIDDQTYYKYVLETPYAL 215
Query: 215 ---HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF + N QW+ LK + DSF+V
Sbjct: 216 TGSHNLAKATAKGNTVVLFVASANDKQWQTSEKILKTMLDSFKV 259
>gi|356571888|ref|XP_003554103.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
[Glycine max]
Length = 260
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F K+G++ V+ +P++R +
Sbjct: 101 VQPYKFILPPTWKQARVA-NILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTN 159
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEGK-VLSMDVEELCGRKYYRYELEPP---- 214
+ATIE IG PEK+I + GP V G + + +L VE+L + YY+Y LE P
Sbjct: 160 K--PNATIEDIGSPEKLIASLGPFVTGNTFDPEELLETSVEKLGDQTYYKYVLETPYALT 217
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF V+ N QW+ LK + +SF V
Sbjct: 218 GTHNLAKATAKGNTVVLFVVSANDKQWQTSEETLKAVLNSFEV 260
>gi|225440155|ref|XP_002283307.1| PREDICTED: psbP domain-containing protein 6, chloroplastic [Vitis
vinifera]
gi|297741687|emb|CBI32819.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F +G++ V+ +P++R +
Sbjct: 105 VQPYQFVLPPTWKQTRVANI-LSGNYCQPKCAEPWVEVKFEDENQGKVQVVASPLIRLTN 163
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYELEPP---- 214
+A+IE IG PEK+I + GP V G + ++L VE+L + YY+Y LE P
Sbjct: 164 K--PNASIEDIGSPEKLIASLGPFVTGNTYDSDELLETSVEKLGDQTYYKYVLETPFALT 221
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF + N QW+ LK + DSF+V
Sbjct: 222 GSHNLAKATAKGNSVVLFVASANDKQWQASQKTLKAMLDSFQV 264
>gi|15228983|ref|NP_191224.1| PsbP domain-containing protein 6 [Arabidopsis thaliana]
gi|75180968|sp|Q9LXX5.1|PPD6_ARATH RecName: Full=PsbP domain-containing protein 6, chloroplastic;
AltName: Full=OEC23-like protein 1; Flags: Precursor
gi|7594543|emb|CAB88068.1| putative protein [Arabidopsis thaliana]
gi|222424215|dbj|BAH20066.1| AT3G56650 [Arabidopsis thaliana]
gi|332646027|gb|AEE79548.1| PsbP domain-containing protein 6 [Arabidopsis thaliana]
Length = 262
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 26/231 (11%)
Query: 42 KRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGG 101
+RR +L+ A I A+L ++ ++ + +P LS D +P D
Sbjct: 41 RRRELLLKSAVAIP-AILQLKEAPISAAREVEVGSYLP-LSPSDPSFVLFKAKPSDTPAL 98
Query: 102 HGVGWSPIIPYLFSVPQEWDEVPVSIAD-LGGTE---------IDLRFASPKKGRLFVIV 151
+ PY F +P W ++ IA+ L G I+++F + K+G++ V+
Sbjct: 99 RAGN---VQPYQFVLPPNWKQL--RIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVA 153
Query: 152 APVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYE 210
+P++R + +ATIE +G PEKVI + GP V G + + ++L +E++ + YY+Y
Sbjct: 154 SPLIRLTNK--PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYV 211
Query: 211 LEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
LE P H L ATA G+ + LF V+ QW+ L+ I DSF++
Sbjct: 212 LETPFALTGSHNLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262
>gi|413935199|gb|AFW69750.1| hypothetical protein ZEAMMB73_728279 [Zea mays]
Length = 155
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 60 GFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPII 110
GF GLA QGLLAGR+PGLSEP+E GWRTY RPDDKSGGHGVGWSPI+
Sbjct: 66 GFAGRGLAA-NQGLLAGRIPGLSEPNENGWRTYCRPDDKSGGHGVGWSPIM 115
>gi|147864201|emb|CAN83026.1| hypothetical protein VITISV_039682 [Vitis vinifera]
Length = 239
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F +G++ V+ +P++R +
Sbjct: 80 VQPYQFVLPPTWKQTRVANI-LSGNYCQPKCAEPWVEVKFEDENQGKVQVVASPLIRLTN 138
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYELEPP---- 214
+A+IE IG PEK+I + GP V G + ++L VE+L + YY+Y LE P
Sbjct: 139 K--PNASIEDIGSPEKLIASLGPFVTGNTYDSDELLETSVEKLGDQTYYKYVLETPFALT 196
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF + N QW+ LK + DSF+V
Sbjct: 197 GSHNLAKATAKGNSVVLFVASANDKQWQASQKTLKAMLDSFQV 239
>gi|255570482|ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223534477|gb|EEF36178.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 260
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F K+G++ V+ +P++R +
Sbjct: 101 VQPYQFILPPTWKQARVA-NILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTN 159
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP---- 214
+ATIE+IG PEK+I + GP V G + + ++L +E+L + YY+Y LE P
Sbjct: 160 K--PNATIEEIGTPEKLIASLGPFVTGNSYDPDELLETSIEKLGDQTYYKYVLETPYALT 217
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA G+ + LF + N QW+ LK I DSF V
Sbjct: 218 GTHNLAKATAKGSTVVLFVASANDKQWQASEKTLKAIIDSFIV 260
>gi|224086769|ref|XP_002307956.1| predicted protein [Populus trichocarpa]
gi|222853932|gb|EEE91479.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F K+G++ V+ +P++R +
Sbjct: 98 VQPYQFILPPSWKQTRVANI-LSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTN 156
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP---- 214
+ATIE+IG PEK+I + GP V G + + ++L +E+ + YY+Y LE P
Sbjct: 157 K--PNATIEEIGNPEKLIASLGPFVTGNSYDPDELLETKIEKFGDQTYYKYMLETPFALT 214
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA G+ + LF + N QW+ LK I DSF++
Sbjct: 215 GTHNLAKATAKGSTVVLFVASANDKQWQASEKTLKAILDSFQI 257
>gi|115440559|ref|NP_001044559.1| Os01g0805300 [Oryza sativa Japonica Group]
gi|55296826|dbj|BAD68170.1| thylakoid lumenal 20 kDa protein-like [Oryza sativa Japonica Group]
gi|113534090|dbj|BAF06473.1| Os01g0805300 [Oryza sativa Japonica Group]
gi|215686493|dbj|BAG87754.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686834|dbj|BAG89684.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737429|dbj|BAG96559.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189235|gb|EEC71662.1| hypothetical protein OsI_04124 [Oryza sativa Indica Group]
gi|222619413|gb|EEE55545.1| hypothetical protein OsJ_03797 [Oryza sativa Japonica Group]
Length = 272
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F K+G++ V+ +P++R +
Sbjct: 113 VQPYEFILPPTWKQTRVANI-LSGNYCQPKCAEPWVEVKFEDDKQGKVQVVASPLIRLTN 171
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYELEPP---- 214
+ATIE IG PE++I + GP V G + +++ VE++ G+ YY Y LE P
Sbjct: 172 R--PNATIEDIGSPERLIASLGPFVTGNTFDSDELVDTSVEKIDGQTYYSYVLETPLALT 229
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF + + QW+ LK I DSF+V
Sbjct: 230 GSHNLAKATAKGNTVVLFVASASDKQWQSSEKVLKTIVDSFKV 272
>gi|363814543|ref|NP_001242704.1| uncharacterized protein LOC100813771 [Glycine max]
gi|255636717|gb|ACU18694.1| unknown [Glycine max]
Length = 265
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFADD 160
+ PY F +P W + V+ G ++++F K+G++ V+ +P++R +
Sbjct: 106 VQPYKFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNK 165
Query: 161 LGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP----- 214
+A+IE IG PEK+I + GP V G ++ ++L VE++ + YY+Y LE P
Sbjct: 166 --PNASIEDIGSPEKLIASLGPFVTGNTLDPDELLETSVEKIGDQTYYKYVLETPYALTG 223
Query: 215 -HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF V+ N QW+ LK + +SF V
Sbjct: 224 THNLAKATAKGNTVVLFVVSANDKQWQTSEETLKAVLNSFEV 265
>gi|195613260|gb|ACG28460.1| hypothetical protein [Zea mays]
Length = 260
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 19/238 (7%)
Query: 33 GSDSVDGVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTY 92
G S D + R + LV+ AS V+G + + + +A P G+ +
Sbjct: 27 GVPSADDAVPRPAPLVAAASHRRELVVGAALTAVLLPRAREVAVGTYLPPAPSNPGFVFF 86
Query: 93 RRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKK 144
R + G + PY F +P W + V+ G ++++F K+
Sbjct: 87 RATSKDTPALRAGN--VEPYEFILPPTWKQTRVANILSGNYFQPKCAEPWVEVKFEDEKQ 144
Query: 145 GRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCG 203
G++ V+ +P++R + +ATIE IG PE++I + GP V G + +++ +VE + G
Sbjct: 145 GKVQVVASPLIRLTNK--PNATIEDIGSPERLIASLGPFVTGNTFDSDELVDTNVENVDG 202
Query: 204 RKYYRYELEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ YY Y LE P H L ATA G+ + LF + N QW LK I DSF++
Sbjct: 203 QTYYSYVLETPLALTGSHNLAKATAKGSTVVLFVASANDKQWPASQKVLKAIVDSFQI 260
>gi|226501880|ref|NP_001145426.1| uncharacterized protein LOC100278794 [Zea mays]
gi|195656049|gb|ACG47492.1| hypothetical protein [Zea mays]
Length = 266
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 33 GSDSVDGVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTY 92
G S D + R + LV+ AS V+G +L R P ++ E TY
Sbjct: 27 GVPSADDAVPRPAPLVAAASHRRELVVG-------AALTAVLLPRAPLPAQAREVAVGTY 79
Query: 93 RRPDDKSGGH-----------GVGWSPIIPYLFSVPQEWDEVPVSIADLGG--------T 133
P + G + + PY F +P W + V+ G
Sbjct: 80 LPPAPSNPGFVFFRATSKDTPALRAGNVEPYEFILPPTWKQTRVANILSGNYCQPKCAEP 139
Query: 134 EIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG-K 192
++++F K+G++ V+ +P++R + +ATIE IG PE++I + GP V G + +
Sbjct: 140 WVEVKFEDEKQGKVQVVASPLIRLTNK--PNATIEDIGSPERLIASLGPFVTGNTFDSDE 197
Query: 193 VLSMDVEELCGRKYYRYELEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYTDL 246
++ +VE + G+ YY Y LE P H L ATA G+ + LF + N QW L
Sbjct: 198 LVDTNVENVDGQTYYSYVLETPLALTGSHNLAKATAKGSTVVLFVASANDKQWPASQKVL 257
Query: 247 KKIADSFRV 255
K I DSF++
Sbjct: 258 KAIVDSFQI 266
>gi|414880083|tpg|DAA57214.1| TPA: hypothetical protein ZEAMMB73_926737 [Zea mays]
Length = 266
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 33 GSDSVDGVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTY 92
G S D + R + LV+ AS V+G +L R P ++ E TY
Sbjct: 27 GVPSADDAVPRPAPLVAAASHRRELVVG-------AALTAVLLPRAPLPAQAREVAVGTY 79
Query: 93 RRPDDKSGGH-----------GVGWSPIIPYLFSVPQEWDEVPVSIADLGG--------T 133
P + G + + PY F +P W + V+ G
Sbjct: 80 LPPAPSNPGFVFFRATPKDTPALRAGNVEPYEFILPPTWKQTRVANILSGNYCQPKCAEP 139
Query: 134 EIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEG-K 192
++++F K+G++ V+ +P++R + +ATIE IG PE++I + GP V G + +
Sbjct: 140 WVEVKFEDEKQGKVQVVASPLIRLTNK--PNATIEDIGSPERLIASLGPFVTGNTFDSDE 197
Query: 193 VLSMDVEELCGRKYYRYELEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYTDL 246
++ +VE + G+ YY Y LE P H L ATA G+ + LF + N QW L
Sbjct: 198 LVDTNVENVDGQTYYSYVLETPLALTGSHNLAKATAKGSTVVLFVASANDKQWPASQKVL 257
Query: 247 KKIADSFRV 255
K I DSF++
Sbjct: 258 KAIVDSFQI 266
>gi|357125499|ref|XP_003564431.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
[Brachypodium distachyon]
Length = 279
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFADD 160
+ PY F +P W + V+ G ++++F ++G++ V+ +P++R +
Sbjct: 120 VQPYEFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDRQGKVQVVASPLIRLTNR 179
Query: 161 LGDDATIEKIGPPEKVINAFGPEVIGENVEGK-VLSMDVEELCGRKYYRYELEPP----- 214
+ATIE IG PEK++ + GP V G +E + +L VE++ + YY Y LE P
Sbjct: 180 --PNATIEDIGSPEKLMASLGPFVTGNTLEPEEILETTVEKIGDQTYYSYVLETPLALTG 237
Query: 215 -HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF + + QW+ LK + DSF+V
Sbjct: 238 SHNLAKATAKGNTVVLFVASASDKQWQSSQKILKAMVDSFQV 279
>gi|326509981|dbj|BAJ87207.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 111 PYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFADDL 161
PY F +P W ++ V+ L G ++++F ++G++ V+ +P++R +
Sbjct: 117 PYEFILPPTWKQLRVA-NILSGNYCQPKCAEPWVEVKFEDERQGKVQVVASPLIRLTNR- 174
Query: 162 GDDATIEKIGPPEKVINAFGPEVIGENVEGK-VLSMDVEELCGRKYYRYELEPP------ 214
+ATIE IG PEK+I + GP V G +E + ++ VE++ YY Y LE P
Sbjct: 175 -PNATIEDIGSPEKLIASLGPFVTGNTLEPEEIIETSVEKIGDLTYYSYVLETPLALTGS 233
Query: 215 HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA GN + LF + + QW+ LK + DSF+V
Sbjct: 234 HNLAKATAKGNTVVLFVASASDKQWQSSQKILKAMVDSFQV 274
>gi|118489766|gb|ABK96683.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 119
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 66/108 (61%), Gaps = 20/108 (18%)
Query: 1 MGTTLFSSCSFL-----AQI--------SSVENGISRVKAVACSTGSDSVDG-------V 40
MGTTL +SC QI S E+ SR K A S + +DG
Sbjct: 1 MGTTLLTSCGIQWRYHHQQIVPDNHLLSHSQESFSSRAKITAESRKNGFLDGENEKSAWF 60
Query: 41 MKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQG 88
+KRRSVLVSG SL+S++VLG +GLAVVKQGLLAGR+PGLSEPD+QG
Sbjct: 61 LKRRSVLVSGVSLVSTSVLGSAGEGLAVVKQGLLAGRIPGLSEPDDQG 108
>gi|449459072|ref|XP_004147270.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
[Cucumis sativus]
gi|449501207|ref|XP_004161307.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
[Cucumis sativus]
Length = 263
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + V+ L G ++++F K+G++ ++ +P++R +
Sbjct: 104 VQPYQFILPPTWKQTRVANI-LSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTN 162
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYELEPP---- 214
+ATIE IG PEKVI + GP V G + ++L VE+L + YY+Y LE P
Sbjct: 163 K--PNATIEDIGSPEKVIASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALT 220
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L ATA G+ + LF + N QW+ L+ + DSF +
Sbjct: 221 GTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFHL 263
>gi|302792471|ref|XP_002978001.1| hypothetical protein SELMODRAFT_176658 [Selaginella moellendorffii]
gi|300154022|gb|EFJ20658.1| hypothetical protein SELMODRAFT_176658 [Selaginella moellendorffii]
Length = 259
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 21/163 (12%)
Query: 109 IIPYLFSVPQEWDEVPVSIAD-LGGTE---------IDLRFASPKKGRLFVIVAPVLRFA 158
+ PY F +P W + IA+ L G ++++F K+G L V+ AP++R
Sbjct: 100 VQPYEFILPSTWKQQ--RIANILSGNYCQPKCAEPWVEVKFEDDKEGSLQVVAAPMVRLT 157
Query: 159 DDLGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP--- 214
+ +A I++IG PEK+I A GP V G + + +V+ V++ G K+Y Y LE P
Sbjct: 158 NK--PNARIDEIGSPEKLIAALGPFVTGNSYDPDEVIETSVKDRDGEKFYCYTLETPYAK 215
Query: 215 ---HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFR 254
H L AT+ GN + LF V+ + QW + + L+ I DSF+
Sbjct: 216 TGTHNLAAATSKGNVVLLFVVSASESQWSKSESVLRTILDSFK 258
>gi|302766653|ref|XP_002966747.1| hypothetical protein SELMODRAFT_144149 [Selaginella moellendorffii]
gi|300166167|gb|EFJ32774.1| hypothetical protein SELMODRAFT_144149 [Selaginella moellendorffii]
Length = 207
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTE---------IDLRFASPKKGRLFVIVAPVLRFAD 159
+ PY F +P W + ++ L G ++++F K+G L V+ AP++R +
Sbjct: 48 VQPYEFILPSTWKQQRIANI-LSGNYCQPKCAEPWVEVKFEDDKEGSLQVVAAPMVRLTN 106
Query: 160 DLGDDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP---- 214
+A I++IG PEK+I A GP V G + + +V+ V++ G K+Y Y LE P
Sbjct: 107 K--PNARIDEIGSPEKLIAALGPFVTGNSYDPDEVIETSVKDRDGEKFYCYTLETPYAKT 164
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFR 254
H L AT+ GN + LF V+ + QW + + L+ I DSF+
Sbjct: 165 GAHNLAAATSKGNVVLLFVVSASESQWSKSESVLRTILDSFK 206
>gi|255070673|ref|XP_002507418.1| thylakoid lumenal protein, chloroplast precursor [Micromonas sp.
RCC299]
gi|226522693|gb|ACO68676.1| thylakoid lumenal protein, chloroplast precursor [Micromonas sp.
RCC299]
Length = 292
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 111 PYLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFADDLG 162
PY +P E+ E PVS A G +++F P G L +I+ P +
Sbjct: 130 PYSILLPPEFKEAPVSNARSGNYCQPRCDEATTEVQFVEPSAGSLQIIIIPTTKLLI-AK 188
Query: 163 DDATIEKIGPPEKVINAFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEPP------ 214
D T+E +G + ++NA P + G +V+S + GR YY YEL P
Sbjct: 189 QDPTVEDVGTIDGILNAISPAITGSVAAEPEEVVSASTKVKDGRSYYEYELLTPFAEFGL 248
Query: 215 HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H + + N + + ++ + QW + DLKK+ DSFRV
Sbjct: 249 HSVSAVSTNKNYVMIATIAASEKQWAKSEADLKKVIDSFRV 289
>gi|145343672|ref|XP_001416437.1| thylakoid lumenal 20 kDa protein, putative [Ostreococcus
lucimarinus CCE9901]
gi|144576662|gb|ABO94730.1| thylakoid lumenal 20 kDa protein, putative [Ostreococcus
lucimarinus CCE9901]
Length = 285
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFADD 160
I PY S+P +W E+PVS A G +++FASP G L VI+ P +
Sbjct: 116 IEPYKISLPGDWKEIPVSNAKSGNYCQPRCDEATTEVQFASPTAGTLQVIIIPTNKLMIT 175
Query: 161 LGDDATIEKIGPPEKVINAFGPEVIGENV--EGKVLSMDVEELCGRKYYRYELEPP---- 214
IE +G + V+NA P + G + +++S + R YY+YEL P
Sbjct: 176 -EKSPEIESVGTLDSVLNAVSPAITGSVAVEQEEIISQEQYSKNNRGYYQYELLTPFAAY 234
Query: 215 --HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
H L T + N + + +V + QW +L+ + SF++
Sbjct: 235 GLHNLACVTTSQNYVVIATVAASEKQWSTSEQELRNVVTSFQI 277
>gi|384245482|gb|EIE18976.1| Mog1p/PsbP-like protein [Coccomyxa subellipsoidea C-169]
Length = 256
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 111 PYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKI 170
PY F++P W E V+ G F ++VAP+ R + +IEK+
Sbjct: 120 PYRFALPPTWHEGKVANIQSGN------FCQ-------LLVAPLRRLG--VNKPVSIEKV 164
Query: 171 GPPEKVINAFGPEVIGENV-EGKVLSMDVEELCGRKYYRYEL------EPPHVLITATAA 223
G + V+++ GP + G + E V+SM+ + + G+ YY YE PPH + TA
Sbjct: 165 GSIDSVLSSIGPFISGTGIDEEDVVSMEQKVIDGKTYYFYETYAPSGTNPPHSVTCVTAK 224
Query: 224 GNRLYLFSVTGNGLQWKRHYTDLKKIADSFR 254
G+ YLF QW + LKK+ ++FR
Sbjct: 225 GDLAYLFITAATDKQWSKSAGKLKKMVETFR 255
>gi|303286647|ref|XP_003062613.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456130|gb|EEH53432.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 268
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 112 YLFSVPQE-WDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKI 170
Y F P+E W VS+ D +DLRF+SP +G+L V P + D +++ +
Sbjct: 118 YSFKYPKESWKPDIVSLNDGKLYGVDLRFSSPTEGKLCTHVLPFV-------DKDSLKDV 170
Query: 171 GPPEKVINAFGPEVIG----EN-------VEGKVLSMDVEELCGRKYYRYELEPPHVLIT 219
G PE ++ F E+IG EN G V S G YY YEL PH LI+
Sbjct: 171 GSPEVALDRF-VELIGAFWDENGFGVPGGAAGTVKSTKTVVKDGVMYYEYELTKPHNLIS 229
Query: 220 ATAAGNRLYLFSVT-GNGLQWKRHYTDLKKIADSFRV 255
A +LY+ + + GN QW +L+ I SF V
Sbjct: 230 AAVTDGQLYVINASAGNERQWASGEANLRGIVGSFYV 266
>gi|308801609|ref|XP_003078118.1| unnamed protein product [Ostreococcus tauri]
gi|116056569|emb|CAL52858.1| unnamed protein product [Ostreococcus tauri]
Length = 216
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPK-KGRLFVIVAPVLRFADDLGDDATIEKI 170
Y F++P +W VS+ D +D R+ S G+L V V P + G D +IE+
Sbjct: 68 YEFTMPDDWAADIVSLNDGKLYGVDTRYKSGSGNGQLAVSVLPFV------GAD-SIEQA 120
Query: 171 GPPEKVINAFGPEVIGENVE----------GKVLSMDVEELCGRKYYRYELEPPHVLITA 220
G E V+ F E++G E G V + + G YY YEL PH LI+A
Sbjct: 121 GSAEDVLGRF-EELVGAYWEQNGFGVPGRAGAVKETSLTKKQGVAYYNYELVNPHNLISA 179
Query: 221 TAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
LY+ + WK +DL+ I DSF V
Sbjct: 180 CVVNGELYIMVASCGARSWKTAESDLRSIVDSFTV 214
>gi|303278162|ref|XP_003058374.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459534|gb|EEH56829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFADDLGD 163
Y ++P W E PVS A G +++F P G + +I+ P + +
Sbjct: 36 YHIALPPTWKEAPVSNARSGNYCQPRCDEATTEVQFVDPTAGSVQIIIIPTTKLLI-AKN 94
Query: 164 DATIEKIGPPEKVINAFGPEVIGE-NVE-GKVLSMDVEELCGRKYYRYELEPP------H 215
+ +IE +G +INA P + G VE +++S + + G+ YY YEL P H
Sbjct: 95 EPSIEDVGELNGLINAISPSITGSVAVEPEEIVSAEEVKHEGKTYYAYELLTPFAEFGLH 154
Query: 216 VLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ + + N + + ++ + QW + D KKI DSFRV
Sbjct: 155 NVAKVSTSKNYVVIAALAASEKQWGKSEADCKKILDSFRV 194
>gi|145344211|ref|XP_001416630.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576856|gb|ABO94923.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPK-KGRLFVIVAPVLRFADDLGDDATIEKI 170
Y F P++W VS+ D +D R+ S G+L V V P + G D I+
Sbjct: 72 YSFEYPEDWSADIVSLNDGKLYGVDTRYKSDTGNGQLAVSVLPFV------GADG-IKDA 124
Query: 171 GPPEKVINAFGPEVIGENVEGKVL--------SMDVEELCGRKYYRYELEPPHVLITATA 222
G PE V+ F E+IG E S V G YY YEL PH LI+A
Sbjct: 125 GTPEDVLQRF-EELIGAYWEQNGFGQPGRTPSSTSVSTKNGVDYYLYELVSPHNLISACI 183
Query: 223 AGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
LYL + WK DL+ I DSF+V
Sbjct: 184 VEGELYLMVASCGARSWKSAEGDLRSIVDSFKV 216
>gi|255076013|ref|XP_002501681.1| predicted protein [Micromonas sp. RCC299]
gi|226516945|gb|ACO62939.1| predicted protein [Micromonas sp. RCC299]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 112 YLFSVPQE-WDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKI 170
Y F P++ W VS+ D +DLRF+SP +G+L V P + D +++ +
Sbjct: 151 YSFKYPKDSWKPDIVSLNDGKLYGVDLRFSSPSEGKLCTHVLPFV-------DKDSLKDV 203
Query: 171 GPPEKVINAFGPEVIG----EN-------VEGKVLSMDVEELCGRKYYRYELEPPHVLIT 219
G P ++ F E+IG EN G V S G YY+YEL+ PH LI+
Sbjct: 204 GSPAVALDRF-VELIGAFWDENGFGVPGGNAGVVKSTKTVAKDGVVYYQYELDKPHNLIS 262
Query: 220 ATAAGNRLYLFSVT-GNGLQWKRHYTDLKKIADSFRV 255
A +LY+ + + N QW +L+ I +SF V
Sbjct: 263 AAVTDGQLYVINASAANERQWAAGEANLRNIVESFYV 299
>gi|168050759|ref|XP_001777825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670801|gb|EDQ57363.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y+F VPQ W E +S + G D F +P++ V + + F K+G
Sbjct: 55 YIFDVPQGWKERQISKVEKGTNGTDAEFYNPRRKDEKVYLTYLSGF----------RKLG 104
Query: 172 PPEKVINAFG-PEVIGENVEGKVLSMDVEELC--GRKYYRYELEPP--HVLITATAAGNR 226
P + V+N +V +++ G + ++L G+ YY +E++ P H LI T A N+
Sbjct: 105 PRDNVLNNLALSDVNLQDILGSAEEVKSDDLVQNGQLYYVFEIDSPVAHELIKVTCAKNK 164
Query: 227 LYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
LY V W R L+K+ DSF +
Sbjct: 165 LYTQFVKAPVSDWARDNVMLRKVHDSFTTI 194
>gi|242054707|ref|XP_002456499.1| hypothetical protein SORBIDRAFT_03g037420 [Sorghum bicolor]
gi|241928474|gb|EES01619.1| hypothetical protein SORBIDRAFT_03g037420 [Sorghum bicolor]
Length = 262
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 17/130 (13%)
Query: 111 PYLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFADDLG 162
PY F +P W + V+ G ++++F K+G++ V+ +P++R +
Sbjct: 115 PYEFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNK-- 172
Query: 163 DDATIEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP------H 215
+ATI+ IG PE++I + GP V G + +++ +VE + G+ YY Y LE P H
Sbjct: 173 PNATIQDIGSPERLIASLGPFVTGNTFDPDELVDTNVENVDGQTYYSYVLETPLALTGSH 232
Query: 216 VLITATAAGN 225
L ATA G+
Sbjct: 233 NLAKATAKGS 242
>gi|92090800|sp|P82658.2|TL19_ARATH RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic;
AltName: Full=P19; Flags: Precursor
gi|304557033|gb|ADM35939.1| chloroplast luminal 19 kDa protein [Arabidopsis thaliana]
gi|304557035|gb|ADM35940.1| chloroplast luminal 19 kDa protein [Arabidopsis thaliana]
Length = 229
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E VS + G D F +PKK L F A ++
Sbjct: 86 YVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKK----TEKEYLTFL------AGFRQLA 135
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEP--PHVLITATAAGN 225
P + ++N A + + + G KV+S + ++ G+ YY YE++ H LIT T + N
Sbjct: 136 PRDVILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKN 195
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
RLY V +W R + L + DSF+ V
Sbjct: 196 RLYAHFVNAPAPEWNRDHDTLTHLRDSFKTV 226
>gi|297821278|ref|XP_002878522.1| hypothetical protein ARALYDRAFT_907941 [Arabidopsis lyrata subsp.
lyrata]
gi|297324360|gb|EFH54781.1| hypothetical protein ARALYDRAFT_907941 [Arabidopsis lyrata subsp.
lyrata]
Length = 229
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E VS + G D F +PKK L F A ++
Sbjct: 86 YVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKK----TEKEYLTFL------AGFRQLA 135
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEP--PHVLITATAAGN 225
P + ++N A + + + G KV+S + ++ G+ YY YE++ H LIT T A N
Sbjct: 136 PRDVILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCAKN 195
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W R + L + DSF+ V
Sbjct: 196 KLYAHFVNAPAPEWNRDHDTLTHLRDSFKTV 226
>gi|356521004|ref|XP_003529148.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
[Glycine max]
Length = 87
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 176 VINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYELEPP------HVLITATAAGNRLY 228
+I + GP VI + ++L VE+LC + YY+Y LE P H L AT GN +
Sbjct: 1 MIASLGPFVIENTFDPEELLETSVEKLCDQTYYKYVLETPYALTGTHNLAKATTKGNTVV 60
Query: 229 LFSVTGNGLQWKRHYTDLKKIADSFRV 255
LF V+ N QW+ LK + +SF V
Sbjct: 61 LFVVSANDKQWQTSKETLKVVLNSFEV 87
>gi|110740201|dbj|BAF01999.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E VS + G D F +PKK L F A ++
Sbjct: 86 YVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKK----TEKEYLTFL------AGFRQLA 135
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEP--PHVLITATAAGN 225
P + ++N A + + + G KV+S + ++ G+ YY YE++ H LIT T + N
Sbjct: 136 PRDVILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKN 195
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W R + L + DSF+ V
Sbjct: 196 KLYAHFVNAPAPEWNRDHDTLTHLRDSFKTV 226
>gi|125562094|gb|EAZ07542.1| hypothetical protein OsI_29797 [Oryza sativa Indica Group]
Length = 243
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK--GRLFVIVAPVLRFADDLG---DDAT 166
Y++ VP+ W E VS + G D F +P+K R ++ R +G D+
Sbjct: 93 YVYEVPEGWKERLVSKVEKGTNGTDSEFFNPRKRSEREYLTFLAGFRALAPVGAVLDNLA 152
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP--HVLITATAAG 224
+ +G +++ +A G VLS + + G+ YY YE+ H LI+ T A
Sbjct: 153 LSDVGLQDQIASADG-----------VLSTERRDGGGQLYYEYEIAGAGAHSLISVTCAR 201
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY VT +W R L+++ SF+ V
Sbjct: 202 NKLYAHFVTAPNPEWSRDEAVLRRLHQSFKTV 233
>gi|115477166|ref|NP_001062179.1| Os08g0504500 [Oryza sativa Japonica Group]
gi|42407675|dbj|BAD08824.1| unknown protein [Oryza sativa Japonica Group]
gi|113624148|dbj|BAF24093.1| Os08g0504500 [Oryza sativa Japonica Group]
gi|125562090|gb|EAZ07538.1| hypothetical protein OsI_29793 [Oryza sativa Indica Group]
gi|125603938|gb|EAZ43263.1| hypothetical protein OsJ_27860 [Oryza sativa Japonica Group]
gi|215692855|dbj|BAG88275.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK--GRLFVIVAPVLRFADDLG---DDAT 166
Y++ VP+ W E VS + G D F +P+K R ++ R +G D+
Sbjct: 93 YVYEVPEGWKERLVSKVEKGTNGTDSEFFNPRKRSEREYLTFLAGFRALAPVGAVLDNLA 152
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP--HVLITATAAG 224
+ +G +++ +A G VLS + + G+ YY YE+ H LI+ T A
Sbjct: 153 LSDVGLQDQIASADG-----------VLSTERRDGGGQLYYEYEIAGAGAHSLISVTCAR 201
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY VT +W R L+++ SF+ V
Sbjct: 202 NKLYAHFVTAPNPEWSRDEAVLRRLHQSFKTV 233
>gi|449436287|ref|XP_004135924.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 245
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 20/153 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E VS + G D F +PKK L F A I ++G
Sbjct: 102 YIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKRS----EKEYLTFL------AGIRQLG 151
Query: 172 PPEKVINAFGPEVIGENVEGKV------LSMDVEELCGRKYYRYELEPP--HVLITATAA 223
P + ++N + N++ ++ L+ + ++ G+ YY YE++ H LI+ T A
Sbjct: 152 PKDVILNNLALSDV--NLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCA 209
Query: 224 GNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY V +W R L+ + DSF+ V
Sbjct: 210 KNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTV 242
>gi|449489040|ref|XP_004158197.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 250
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 20/153 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E VS + G D F +PKK L F A I ++G
Sbjct: 107 YIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKRS----EKEYLTFL------AGIRQLG 156
Query: 172 PPEKVINAFGPEVIGENVEGKV------LSMDVEELCGRKYYRYELEPP--HVLITATAA 223
P + ++N + N++ ++ L+ + ++ G+ YY YE++ H LI+ T A
Sbjct: 157 PKDVILNNLALSDV--NLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCA 214
Query: 224 GNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY V +W R L+ + DSF+ V
Sbjct: 215 KNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTV 247
>gi|302762264|ref|XP_002964554.1| hypothetical protein SELMODRAFT_68404 [Selaginella moellendorffii]
gi|302822918|ref|XP_002993114.1| hypothetical protein SELMODRAFT_48330 [Selaginella moellendorffii]
gi|302825201|ref|XP_002994232.1| hypothetical protein SELMODRAFT_49175 [Selaginella moellendorffii]
gi|300137903|gb|EFJ04699.1| hypothetical protein SELMODRAFT_49175 [Selaginella moellendorffii]
gi|300139005|gb|EFJ05754.1| hypothetical protein SELMODRAFT_48330 [Selaginella moellendorffii]
gi|300168283|gb|EFJ34887.1| hypothetical protein SELMODRAFT_68404 [Selaginella moellendorffii]
Length = 183
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK---GRLFVIVAPVLRFA--DDLGDDAT 166
Y+F VPQ W E +S + G D F +P++ +A + A D++ +D +
Sbjct: 41 YIFEVPQGWKERLISKVEKGTNGTDSEFYNPRRKGEKTYLTYLAGFRKLANRDNVLNDLS 100
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP--HVLITATAAG 224
+ + + + A + + D + G+ YY YE++ P H LI T A
Sbjct: 101 LSDVSLQDDISQA-----------DSIKASDKQNDSGQLYYEYEIQGPVAHSLIFVTCAK 149
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY V W R L+ + +SF V
Sbjct: 150 NKLYAHYVRAPTQDWTRDEPMLRHVHESFMTV 181
>gi|116781528|gb|ABK22139.1| unknown [Picea sitchensis]
Length = 256
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VPQ W E VS + G D F +PK+ L F A +
Sbjct: 110 YVYDVPQGWKERLVSKVEKGTNGTDSEFFNPKRK----TEKEYLTFL------AGFRTLA 159
Query: 172 PPEKVINAFG-PEVIGENVEGKVLSMDVEELCGRK---YYRYELEPP--HVLITATAAGN 225
P + V+N +V ++V S+ E G YY +E++ P H LI+ T A N
Sbjct: 160 PKDSVLNNLSLSDVNLQDVIASAESIKSSERNGSNGQLYYDFEIDSPMAHSLISVTCARN 219
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V W R LK + +SF V
Sbjct: 220 KLYAHFVNAPLQDWARDEAMLKHVHESFETV 250
>gi|159474396|ref|XP_001695311.1| PsbP-like protein [Chlamydomonas reinhardtii]
gi|158275794|gb|EDP01569.1| PsbP-like protein [Chlamydomonas reinhardtii]
Length = 150
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 139 FASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDV 198
F GR+ +IVAP+ + + +E +G PE+++ G + G ++ L
Sbjct: 28 FEGTTGGRVELIVAPLQKLTPR--KNIKVEDLGTPEQLLQRVGNYITGTYLDEDALVSGT 85
Query: 199 EELC--GRKYYRYELEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIA 250
+ G YY YEL P H T G+ YLF + N QW + LK+
Sbjct: 86 SKTLDDGLTYYYYELNAPYAKVGGHSFTACTVKGDLAYLFITSANEKQWGKLEGSLKQTV 145
Query: 251 DSFR 254
+SFR
Sbjct: 146 ESFR 149
>gi|148908734|gb|ABR17474.1| unknown [Picea sitchensis]
Length = 256
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VPQ W E VS + G D F +PK+ L F A +
Sbjct: 110 YVYDVPQGWKERLVSKVEKGTNGTDSEFFNPKRK----TEKEYLTFL------AGFRTLA 159
Query: 172 PPEKVINAFG-PEVIGENVEGKVLSMDVEELCGRK---YYRYELEPP--HVLITATAAGN 225
P + V+N +V ++V S+ E G YY +E++ P H LI+ T A N
Sbjct: 160 PKDSVLNNLSLSDVNLQDVIASAESIKSSERNGSNGQLYYDFEIDSPIAHSLISVTCARN 219
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V W R LK + +SF V
Sbjct: 220 KLYAHFVNAPLQDWARDEAMLKHVHESFETV 250
>gi|326532046|dbj|BAK01399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 242
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 26/156 (16%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRL---------FVIVAPVLRFADDLG 162
Y++ VP+ W E VS + G D F +P+K F +APV D+L
Sbjct: 96 YVYDVPEGWKERLVSKVEKGTNGTDSEFFNPRKRSEREYLTFLSGFRKLAPVGAVLDNLA 155
Query: 163 DDATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP--HVLITA 220
+ +G +++ +A V S + ++ G+ YY YE+ H LI+
Sbjct: 156 ----LSDVGLQDQISSA-----------DDVTSAERKDADGQVYYEYEVAGAGAHSLISV 200
Query: 221 TAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
T A N+LY VT +W R L+++ SF+ V
Sbjct: 201 TCARNKLYAHFVTAPNPEWGRDEAVLRRLHQSFKTV 236
>gi|226491484|ref|NP_001148434.1| thylakoid lumenal 19 kDa protein [Zea mays]
gi|195619244|gb|ACG31452.1| thylakoid lumenal 19 kDa protein [Zea mays]
gi|414869373|tpg|DAA47930.1| TPA: thylakoid lumenal protein [Zea mays]
Length = 257
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK--GRLFVIVAPVLRFADDLG---DDAT 166
Y++ VP+ W E VS + G D F +P+K + ++ +R L D+
Sbjct: 106 YVYDVPEGWKERLVSKVEKGTNGTDSEFFNPRKRAEKEYLTFLSGIRALAPLSAVLDNLA 165
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE--PPHVLITATAAG 224
+ +G +++ +A V S + + G+ YY YE+ H LI+ T A
Sbjct: 166 LSDVGLLDQISSA-----------DDVRSAERADGAGQVYYEYEVAGASAHSLISVTCAR 214
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY VT +W R L+++ +SF+ +
Sbjct: 215 NKLYAHFVTAPNAEWSRDEAMLRRLHESFKTI 246
>gi|351725327|ref|NP_001235041.1| uncharacterized protein LOC100305670 [Glycine max]
gi|255626267|gb|ACU13478.1| unknown [Glycine max]
Length = 246
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP W E VS + G D F +P+K L F A ++
Sbjct: 103 YVYDVPAGWKERLVSKVEKGTNGTDSEFYNPRKK----AEKEYLTFL------AGFRQLA 152
Query: 172 PPEKVINAFG------PEVIGENVEGKVLSMDVEELCGRKYYRYELEP--PHVLITATAA 223
P + ++N ++IG V S +V++ G+ YY YE++ H LI+ T A
Sbjct: 153 PKDVILNNLALSDVDLQDLIGN--ADSVTSEEVKDDKGQLYYVYEIDGVGTHSLISVTCA 210
Query: 224 GNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY V +W R L+ + +SF+ V
Sbjct: 211 KNKLYAHFVNAPTPEWNRDKDVLRHVHESFKTV 243
>gi|242080033|ref|XP_002444785.1| hypothetical protein SORBIDRAFT_07g027960 [Sorghum bicolor]
gi|241941135|gb|EES14280.1| hypothetical protein SORBIDRAFT_07g027960 [Sorghum bicolor]
Length = 256
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK--GRLFVIVAPVLRFADDLG---DDAT 166
Y++ VP+ W E VS + G D F +P+K + ++ +R L D+
Sbjct: 105 YVYDVPEGWKERLVSKVEKGTNGTDSEFFNPRKRTEKEYLTFLSGIRALAPLSAVLDNLA 164
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP--HVLITATAAG 224
+ +G +++ A V S++ + G+ YY YE+ H LI+ T A
Sbjct: 165 LSDVGLLDQIATA-----------DDVRSVERADGAGQVYYEYEVAGAGAHSLISVTCAR 213
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY VT +W R L+++ +SF+ +
Sbjct: 214 NKLYAHFVTAPNAEWSRDEAMLRRLHESFKTI 245
>gi|357148370|ref|XP_003574737.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
[Brachypodium distachyon]
Length = 248
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKK--GRLFVIVAPVLRFADDLG---DDAT 166
Y++ VP W E VS + G D F +P+K R ++ R +G D+
Sbjct: 102 YVYDVPGTWKERLVSKVEKGTNGTDSEFYNPRKRSEREYLTFLSGFRALAPIGAVLDNLA 161
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP--HVLITATAAG 224
+ +G +++ A +V S + + G+ YY YE+ H LI+ T A
Sbjct: 162 LSDVGLQDQISTA-----------DEVRSTEERKEDGQVYYEYEVAGAGAHSLISVTCAR 210
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY VT +W R L+++ SF+ V
Sbjct: 211 NKLYAHFVTAPNPEWGRDEEVLRRLHQSFKTV 242
>gi|334186238|ref|NP_001190172.1| Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family
protein, partial [Arabidopsis thaliana]
gi|332646980|gb|AEE80501.1| Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family
protein, partial [Arabidopsis thaliana]
Length = 143
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 116 VPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEK 175
V + W E VS + G D F +PKK L F A ++ P +
Sbjct: 4 VEEGWKERLVSKVEKGTNGTDSEFYNPKKK----TEKEYLTFL------AGFRQLAPRDV 53
Query: 176 VIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEP--PHVLITATAAGNRLYL 229
++N A + + + G KV+S + ++ G+ YY YE++ H LIT T + N+LY
Sbjct: 54 ILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNKLYA 113
Query: 230 FSVTGNGLQWKRHYTDLKKIADSFRVV 256
V +W R + L + DSF+ V
Sbjct: 114 HFVNAPAPEWNRDHDTLTHLRDSFKTV 140
>gi|302829516|ref|XP_002946325.1| hypothetical protein VOLCADRAFT_102920 [Volvox carteri f.
nagariensis]
gi|300269140|gb|EFJ53320.1| hypothetical protein VOLCADRAFT_102920 [Volvox carteri f.
nagariensis]
Length = 269
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 111 PYLFSVPQEWDEVPVSIADLGGTE--------IDLRFASPKKGRLFVIVAPVLRFADDLG 162
PY F++P + E V+ G ++ F + GR+ +IV+P+ +
Sbjct: 112 PYRFALPPNFVEQKVANIQSGNYCQPRCDEPWTEVVFEGTQGGRVELIVSPLQKLTPR-- 169
Query: 163 DDATIEKIGPPEKVINAFGPEVIGENV-EGKVLSMDVEELCGRKYYRYELEPP------H 215
+ +E +G P++++ G + G + E +++ G YY YEL P H
Sbjct: 170 KNVKVEDLGTPDQLLERVGNYITGTYLDEDALVATGSRTQDGLTYYFYELNAPYAKTGAH 229
Query: 216 VLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFR 254
T G+ +LF + + QW + + L+++ +SFR
Sbjct: 230 SYTACTVKGDLAFLFVASASEKQWGKLESRLRQVVESFR 268
>gi|356557150|ref|XP_003546881.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
[Glycine max]
Length = 240
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKG---RLFVIVAPVLRFA--DDLGDDAT 166
Y++ VP W E VS + G D F +PKK +A + A D + ++
Sbjct: 97 YVYDVPAGWKERLVSKVEKGTNGTDSEFYNPKKKAEKEYLTFLAGFRQLAPKDVILNNLA 156
Query: 167 IEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEP--PHVLITATAAG 224
+ + + + NA V S +V++ G+ YY YE++ H LI+ T A
Sbjct: 157 LSDVDLQDLIANA-----------DSVTSDEVKDDKGQLYYVYEIDGVGTHSLISVTCAK 205
Query: 225 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
N+LY V +W R L+ + +SF+ V
Sbjct: 206 NKLYAHFVNAPTPEWNRDKDMLRHVHESFKTV 237
>gi|224104053|ref|XP_002313298.1| predicted protein [Populus trichocarpa]
gi|222849706|gb|EEE87253.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP W E VS + G D F +PKK + + F ++
Sbjct: 96 YVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYLAGF----------RQLA 145
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEP--PHVLITATAAGN 225
P + V+N A + + + G V+S++ ++ G+ YY YE++ H LI T A N
Sbjct: 146 PKDSVLNNLALSDVDLQDLISGADSVVSVEEKDGNGQLYYVYEIDGVGKHSLIKVTCANN 205
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W + L+ + SF+ V
Sbjct: 206 KLYAHFVNAPTPEWNKDQETLRHLHQSFKTV 236
>gi|388510340|gb|AFK43236.1| unknown [Medicago truncatula]
Length = 241
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E +S + G D F +PKK L F + ++
Sbjct: 100 YIYDVPEGWKERLISKVEKGTNGTDSEFYNPKKR----TEKEYLTFL------SGFRQLA 149
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELE--PPHVLITATAAGN 225
P + V+N A + + + G V S +V++ G+ YY YE++ H LI+ T A N
Sbjct: 150 PKDAVLNNLALSDVNLQDIISGADNVSSEEVKDENGQVYYVYEIDGVAYHSLISVTCANN 209
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W + L + SF+ +
Sbjct: 210 KLYAHFVNAPTPEWNKDKDLLTHVHKSFKTI 240
>gi|357457687|ref|XP_003599124.1| Thylakoid lumenal 19 kDa protein [Medicago truncatula]
gi|355488172|gb|AES69375.1| Thylakoid lumenal 19 kDa protein [Medicago truncatula]
Length = 242
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E +S + G D F +PKK L F + ++
Sbjct: 101 YIYDVPEGWKERLISKVEKGTNGTDSEFYNPKKR----TEKEYLTFL------SGFRQLA 150
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELE--PPHVLITATAAGN 225
P + V+N A + + + G V S +V++ G+ YY YE++ H LI+ T A N
Sbjct: 151 PKDAVLNNLALSDVNLQDIISGADNVSSEEVKDENGQVYYVYEIDGVAYHSLISVTCANN 210
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W + L + SF+ +
Sbjct: 211 KLYAHFVNAPTPEWNKDKDLLTHVHKSFKTI 241
>gi|255571642|ref|XP_002526766.1| Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223533893|gb|EEF35620.1| Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 240
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP+ W E VS + G D F +PKK L F A ++
Sbjct: 97 YVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKK----RTEKEYLTFL------AGFRQLA 146
Query: 172 PPEKVIN--AFGPEVIGENVEG--KVLSMDVEELCGRKYYRYELEP--PHVLITATAAGN 225
P + V+N A + + + G V S + + G+ YY YE++ H LI T A N
Sbjct: 147 PKDVVLNNLALSDVDLQDLISGADSVKSEEKNDDNGQLYYVYEIDGVGKHSLIKVTCAKN 206
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W + L+ + +SF+ V
Sbjct: 207 KLYAHFVNAPTPEWNKDEETLRHLHESFKTV 237
>gi|147787657|emb|CAN69573.1| hypothetical protein VITISV_028610 [Vitis vinifera]
Length = 248
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP W E VS + G D F +PKK L F + ++
Sbjct: 105 YVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKKS----EKEYLTFL------SGFRQLA 154
Query: 172 PPEKVINAFG-PEVIGENVEGKVLSMDVEELC---GRKYYRYELEP--PHVLITATAAGN 225
P + V+N +V +++ S+ EE G+ YY YE++ H LI+ T A N
Sbjct: 155 PKDVVLNNLALSDVSLQDLISSADSVKSEEKKDEKGQVYYVYEIDGVGAHSLISVTCAKN 214
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W R L + +SF+ V
Sbjct: 215 KLYAHFVNAPAPEWTRDKDTLMHLHESFKTV 245
>gi|225450155|ref|XP_002275752.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
[Vitis vinifera]
Length = 247
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y++ VP W E VS + G D F +PKK L F + ++
Sbjct: 104 YVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKKS----EKEYLTFL------SGFRQLA 153
Query: 172 PPEKVINAFG-PEVIGENVEGKVLSMDVEELC---GRKYYRYELEP--PHVLITATAAGN 225
P + V+N +V +++ S+ EE G+ YY YE++ H LI+ T A N
Sbjct: 154 PKDVVLNNLALSDVSLQDLISSADSVKSEEKKDEKGQVYYVYEIDGVGAHSLISVTCAKN 213
Query: 226 RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
+LY V +W R L + +SF+ V
Sbjct: 214 KLYAHFVNAPAPEWTRDKDTLMHLHESFKTV 244
>gi|357120910|ref|XP_003562167.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Brachypodium
distachyon]
Length = 288
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I +GPP++V A +V+ + K++ ++ GR YY +E + P H L T
Sbjct: 189 IRDLGPPDQVAEALIRKVLAPPTQKTKLIEAKENDIDGRAYYTFEFTAQAPNFTRHALGT 248
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
T A + Y + N +W + L KI DSF++
Sbjct: 249 ITIANGKFYTLATGANERRWDKMKDRLHKIVDSFKI 284
>gi|168010712|ref|XP_001758048.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690925|gb|EDQ77290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 142
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 61 FPADGLAVVKQGLLAGRVPGLSEPDEQG-------WRTYRRPDD-KSGGHGVGWSPIIPY 112
F ++ + +Q L GR+PGLSEP G W+ RR GH VG II
Sbjct: 40 FCSEDTSAFEQTSLPGRIPGLSEPYSNGLWTYGDSWKAARRGKKLLLAGHEVGSKQII-- 97
Query: 113 LFSVPQEWDEVPVSIADLGGTEIDLRF 139
+ + + + +V SIADLGG++IDL F
Sbjct: 98 IMILDEGFSQVLPSIADLGGSKIDLGF 124
>gi|224109586|ref|XP_002315245.1| predicted protein [Populus trichocarpa]
gi|222864285|gb|EEF01416.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 167 IEKIGPPEKVINAF-GPEVIGENVEGKVLSMDVEELCGRKYY--RYELEPPHV----LIT 219
I ++GP E+ I N + SM + + G+ YY YEL P+ T
Sbjct: 137 IHELGPMEEAIYFLVKHRYAAPNQMPTIYSMQEKTVEGKNYYTFEYELTSPNYSSVSFAT 196
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
A R Y V N +W+R+ + LK +ADSF+V+
Sbjct: 197 IVIANGRFYTLIVGANERRWRRYRSQLKVVADSFKVL 233
>gi|422303663|ref|ZP_16391014.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9806]
gi|389791336|emb|CCI12845.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9806]
Length = 182
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVEV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLI 218
P +V N+ P + + E +++ + ++ G+ YY Y+++ P H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLPNGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T N+LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNNKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|449464194|ref|XP_004149814.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Cucumis
sativus]
gi|449519084|ref|XP_004166565.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 236
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIG-ENVEGKVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I GPP++V +V+ N + K++ ++ G+ YY +E + P H L T
Sbjct: 138 IRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFEFVAQAPNYTRHALST 197
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L+ + DSF +
Sbjct: 198 IAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTI 233
>gi|326489825|dbj|BAJ93986.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521280|dbj|BAJ96843.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I +GPP++V A +V+ + K++ ++ GR YY +E + P H L T
Sbjct: 133 IRDLGPPDQVAEALVRKVLSPPTQKTKLIEAKETDIDGRAYYTFEFTAQAPNFTRHALGT 192
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
T A + Y + N +W + L I DSF++
Sbjct: 193 ITIANGKFYTLATGANERRWDKMKDRLHTIVDSFKI 228
>gi|218247324|ref|YP_002372695.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8801]
gi|257061341|ref|YP_003139229.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8802]
gi|218167802|gb|ACK66539.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8801]
gi|256591507|gb|ACV02394.1| photosystem II oxygen evolving complex protein PsbP [Cyanothece sp.
PCC 8802]
Length = 183
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W EV V A G ++ R + L VI++ V D+ T+ +G
Sbjct: 37 YQFLYPKGWIEVTVKNAS-EGVDVVFRDLIEQTENLSVIISQV-------PDNKTLADLG 88
Query: 172 PPEKVINAFGPEVIGE-------NVEGKVLSMDVEELCGRKYY--RYELEPP-----HVL 217
P +V G ++ E N + +++ +V E+ + YY Y+++ P H +
Sbjct: 89 TPTEV----GYRLLQEMNQNPDSNRKADLINAEVSEIADKTYYILEYQVQLPNNQQRHNI 144
Query: 218 ITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ + + N+L+ F+++ +W + T K + SF V
Sbjct: 145 ASVSVSRNKLFTFNLSTIESRWNKLKTLFKTVVHSFSV 182
>gi|326492770|dbj|BAJ90241.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 201
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I +GPP++V A +V+ + K++ ++ GR YY +E + P H L T
Sbjct: 102 IRDLGPPDQVAEALVRKVLSPPTQKTKLIEAKETDIDGRAYYTFEFTAQAPNFTRHALGT 161
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
T A + Y + N +W + L I DSF++
Sbjct: 162 ITIANGKFYTLATGANERRWDKMKDRLHTIVDSFKI 197
>gi|388504902|gb|AFK40517.1| unknown [Lotus japonicus]
Length = 234
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 89/243 (36%), Gaps = 49/243 (20%)
Query: 21 GISRVKAVACSTGSDSVDGVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPG 80
S V+C+T + S + +R +L+ G I++ + + L A +P
Sbjct: 32 STSHSNNVSCATETTSSEESHSQRRLLLLGIGAITANLQP---------TRLLFAEEIPD 82
Query: 81 LSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFA 140
YR D S G Y + P +W E D
Sbjct: 83 ----------RYRAFVDYSDG----------YSYVYPSDWKEFDFRAHD----------- 111
Query: 141 SPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVI-NAFGPEVIGENVEGKVLSMDVE 199
S K R + +RF D I +GP E+V+ N + + M +
Sbjct: 112 SAFKDRYLQLQNVRVRFLPTEKKD--IRDMGPIEEVVPNLVKHKYSTPTQISTIYDMQEK 169
Query: 200 ELCGRKYYRYE--LEPPH---VLITATAAGN-RLYLFSVTGNGLQWKRHYTDLKKIADSF 253
+ G+ YY +E L P+ T A GN R Y V N +WKR LK +ADSF
Sbjct: 170 NIDGKHYYTFEYVLTSPNFSSASFTTVAIGNGRYYTLIVGANERRWKRVRNQLKVVADSF 229
Query: 254 RVV 256
R++
Sbjct: 230 RLL 232
>gi|226491834|ref|NP_001147590.1| chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa
protein [Zea mays]
gi|195612378|gb|ACG28019.1| chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa
protein [Zea mays]
gi|238006362|gb|ACR34216.1| unknown [Zea mays]
gi|414864456|tpg|DAA43013.1| TPA: chloroplast oxygen-evolving complex/thylakoid lumenal protein
[Zea mays]
Length = 242
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 67 AVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIP----YLFSVPQEWDE 122
+V ++ L+AG LS P+ + + G+ P++ Y F P W+E
Sbjct: 61 SVRRRVLVAGAAAFLSRPNPAAF---------AAEAKKGFLPVVDKKAGYSFLYPFGWEE 111
Query: 123 VPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIGPPEKVINAFGP 182
V V D ++ S V V + +D+ D +GPP+KV A
Sbjct: 112 VAVQGQDKVYKDVIEPLES-------VSVNSIPTSKEDIRD------LGPPDKVAEALIK 158
Query: 183 EVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLITATAAGNRLYLFSVTGN 235
+V+ + + K++ ++ GR YY +E + P H L A + Y + N
Sbjct: 159 KVLAPSTQKTKLIEAKENDVDGRAYYTFEFTAQAPNYTRHALGAIVIANGKFYTLTTGAN 218
Query: 236 GLQWKRHYTDLKKIADSFRV 255
+W++ L + DSF++
Sbjct: 219 ERRWEKMKDRLHTVVDSFKI 238
>gi|449464218|ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Cucumis
sativus]
Length = 236
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 89/237 (37%), Gaps = 51/237 (21%)
Query: 28 VACSTGSDSVD-GVMKRRSVLVSGASLISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDE 86
+ CS S D G+ RR +L+ G +++++LG L A +P
Sbjct: 41 INCSIERISRDEGIYNRRPLLL-GVGALATSLLG---------ASPLFAEEIP------- 83
Query: 87 QGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGR 146
+ YR D + G Y + P +W E D S K R
Sbjct: 84 ---KNYRAFVDSTDG----------YSYYYPSDWREFDFRAHD-----------SAFKDR 119
Query: 147 LFVIVAPVLRFADDLGDDATIEKIGPPEKVINAF-GPEVIGENVEGKVLSMDVEELCGRK 205
+ ++F D I + GP ++V+N N + + M + G+
Sbjct: 120 YLQLQNVRVKFIPTEKKD--IHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKI 177
Query: 206 YYRYELEPPHVLITATA------AGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
YY +E + + T+ A R Y V N +W+R+ LK +ADSFRV+
Sbjct: 178 YYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVL 234
>gi|225449629|ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
gi|296086288|emb|CBI31729.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 163 DDATIEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYELEPPHVLITAT 221
D I +GP E+V+ V N +L M + + G+ YY E E +
Sbjct: 133 DKRDIHDLGPMEEVVPNLVKNVYAAPNQIATILDMQEKVVDGKNYYTVEYELTSANFSRA 192
Query: 222 -----AAGN-RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
A GN R Y +V N +WKR LK +ADSF+V+
Sbjct: 193 SFVILAIGNGRFYTLNVGANERRWKRVRNKLKVVADSFKVL 233
>gi|303279967|ref|XP_003059276.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459112|gb|EEH56408.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 282
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 22/108 (20%)
Query: 166 TIEKIGPPEKVINAFGPEVIGENVEGKV-LSMDVEELC--------------GRKYYRYE 210
+++ G E V + GP IG NV+ KV +DVE++ + YY ++
Sbjct: 155 SVQSRGGQESVTD-LGP--IG-NVDAKVAFGVDVEDIALAETAGSNVRKDAGKQTYYEWD 210
Query: 211 LEPPH---VLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
L+ P+ VL++A +G LY+ S+ + QWKR +LK+ SF V
Sbjct: 211 LDVPNGSKVLLSACISGGGLYVLSIAASEAQWKRAGEELKRTRASFAV 258
>gi|390441645|ref|ZP_10229687.1| Genome sequencing data, contig C315 [Microcystis sp. T1-4]
gi|389835063|emb|CCI33813.1| Genome sequencing data, contig C315 [Microcystis sp. T1-4]
Length = 182
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDVK--KVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T N+LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNNKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|425469643|ref|ZP_18848562.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9701]
gi|389880473|emb|CCI38767.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9701]
Length = 182
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP-------HVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T N+LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNNKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|425460168|ref|ZP_18839650.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9808]
gi|389827163|emb|CCI21744.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9808]
Length = 182
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T N+LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNNKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|428781554|ref|YP_007173340.1| PsbP [Dactylococcopsis salina PCC 8305]
gi|428695833|gb|AFZ51983.1| PsbP [Dactylococcopsis salina PCC 8305]
Length = 182
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P W EV V + G ++ R + + V++ V G+D + +G
Sbjct: 37 YKFLYPNGWQEVKVD-NNTAGVDVVFRDLVEQTENISVVINQV-------GEDRQLTDLG 88
Query: 172 PP----EKVINAFGPEVIGENVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLITA 220
P +++ N P + +G+++ D E G+ YY Y++ P H + +
Sbjct: 89 TPSEVGQRLKNTIAPP--NSDRQGELIRADELEKKGQTYYLLEYQVTFPDNRKRHNMASV 146
Query: 221 TAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ +LY FS++ +W+ IADSF V
Sbjct: 147 AVSRGKLYTFSISTPQRRWEGLSDRFNTIADSFEV 181
>gi|425448156|ref|ZP_18828135.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
gi|389731137|emb|CCI04772.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
Length = 182
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLI 218
P +V N+ P + + E +++ + ++ G+ YY Y+++ P H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLPNGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|425434490|ref|ZP_18814959.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
gi|389676034|emb|CCH94906.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
Length = 182
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLI 218
P +V N+ P + + E +++ + ++ G+ YY Y+++ P H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLPNGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|425465367|ref|ZP_18844676.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9809]
gi|389832407|emb|CCI24008.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9809]
Length = 182
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ P+ D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVEV--KKVAGVDVVFHDLIETSENLSVIINPI-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T N+LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNNKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|166365167|ref|YP_001657440.1| photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa NIES-843]
gi|166087540|dbj|BAG02248.1| photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa NIES-843]
Length = 182
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ P+ D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPI-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T N+LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNNKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|443475034|ref|ZP_21064996.1| photosystem II oxygen evolving complex protein PsbP [Pseudanabaena
biceps PCC 7429]
gi|443020162|gb|ELS34153.1| photosystem II oxygen evolving complex protein PsbP [Pseudanabaena
biceps PCC 7429]
Length = 182
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 21/154 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P W E G + ID+ F + V VA L ++E+IG
Sbjct: 38 YRFLYPNGWTETK------GNSAIDILFHDIIEPSENVSVA-----ISKLETVKSLEEIG 86
Query: 172 PPEKVINAFGPEVI---GENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLITAT 221
PE + V+ G + K+LS +E R YY +E P H L+T +
Sbjct: 87 NPEAIGLRLKERVVAPEGSGRQAKLLSATQKESGDRNYYTFEYAVERLQGAPRHDLVTVS 146
Query: 222 AAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
LY S++ + +W + ++A SF +
Sbjct: 147 TNRGNLYTLSISSSERRWDKVKDLFARVAKSFTI 180
>gi|242037137|ref|XP_002465963.1| hypothetical protein SORBIDRAFT_01g049040 [Sorghum bicolor]
gi|241919817|gb|EER92961.1| hypothetical protein SORBIDRAFT_01g049040 [Sorghum bicolor]
Length = 242
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I +GPP+KV A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 143 IRDLGPPDKVAEALIKKVLAPPTQKTKLIEAKENDVDGRAYYTFEFTAQAPNYTRHALGA 202
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 203 IVIANGKFYTLTTGANERRWEKMKDRLHTVVDSFKI 238
>gi|297820294|ref|XP_002878030.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297323868|gb|EFH54289.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 229
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 166 TIEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYELE------PPHVLI 218
TI++ GPP+++ +V+ N + ++ ++ G+ YY++E H L
Sbjct: 131 TIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALG 190
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
T T + Y + N +W++ L + DSF++
Sbjct: 191 TITVFNGKFYTLTTGANERRWEKMKDRLHTVVDSFKI 227
>gi|356576841|ref|XP_003556538.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Glycine max]
Length = 231
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYE--LEPPH---VLITA 220
I +GP E+VI + N + M + + G+ YY +E L P+
Sbjct: 133 IRDLGPMEEVIYNLVKHIYAAPNQRPTIKDMQEKTIDGKHYYTFEYILTSPNYSSASFAT 192
Query: 221 TAAGN-RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
A GN R Y V N +WKR LK +ADSFR++
Sbjct: 193 IAIGNGRYYTLIVGANERRWKRFRDQLKVVADSFRLL 229
>gi|388493196|gb|AFK34664.1| unknown [Lotus japonicus]
Length = 240
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 166 TIEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYEL--EPP----HVLI 218
I++ GPP++V V+ N + K++ +++ G+ YYR+E + P H L
Sbjct: 141 NIKEFGPPQQVGETLIKRVLAPPNQKTKIIEATEQDVDGKTYYRFEFIAQAPNYTRHALS 200
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
T + + + Y + N +W + L+ + + F++
Sbjct: 201 TVSVSNGKFYTLTTGANERRWDKMKERLQTVIEFFQI 237
>gi|414878373|tpg|DAA55504.1| TPA: hypothetical protein ZEAMMB73_184948 [Zea mays]
gi|414878374|tpg|DAA55505.1| TPA: hypothetical protein ZEAMMB73_184948 [Zea mays]
Length = 168
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 13 AQISSVENGISRVKAVAC------STGSDSVDGVMKRRSVLVSGASLISSAVLGFPADGL 66
A+ S+V G R AV C S G + +GV ++ ++VLGF GL
Sbjct: 56 AKPSAVAKG--RAAAVTCFSGPSLSVGREDQEGVAVVVGRRALASAAAVASVLGFAGRGL 113
Query: 67 AVVKQGLLAGRVPGLSEPDE 86
A QGLLAGRVPGLSEPDE
Sbjct: 114 AA-NQGLLAGRVPGLSEPDE 132
>gi|110289197|gb|ABG66118.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 323
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 224 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 283
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 284 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 319
>gi|125532244|gb|EAY78809.1| hypothetical protein OsI_33912 [Oryza sativa Indica Group]
Length = 178
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVE-GKVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 79 IRELGPPDQVAEALIRKVLAAPTQKAKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 138
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 139 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 174
>gi|358248758|ref|NP_001239935.1| uncharacterized protein LOC100813624 [Glycine max]
gi|255647240|gb|ACU24088.1| unknown [Glycine max]
Length = 234
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 59/152 (38%), Gaps = 20/152 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y + P +W E D S K R + +RF D I +G
Sbjct: 94 YSYVYPIDWKEFDFRAHD-----------SAFKDRYLQLQNVRVRFIPTEKKD--IRDLG 140
Query: 172 PPEKVI-NAFGPEVIGENVEGKVLSMDVEELCGRKYYRYE--LEPPH---VLITATAAGN 225
P E+VI + N + M + + G+ YY +E L P+ A GN
Sbjct: 141 PMEEVIYDLVKHRYAAPNQRPTINDMQEKTIDGKHYYTFEYILTSPNYSSASFATIAIGN 200
Query: 226 -RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
R Y V N +WKR LK +ADSFR++
Sbjct: 201 GRYYTLIVGANERRWKRFRDQLKVVADSFRLL 232
>gi|218201012|gb|EEC83439.1| hypothetical protein OsI_28915 [Oryza sativa Indica Group]
Length = 244
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 145 IRELGPPDQVAEALIRKVLAAPTQKTKLMEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 204
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 205 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 240
>gi|110289196|gb|ABG66117.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
gi|215701443|dbj|BAG92867.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215769320|dbj|BAH01549.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 523
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 424 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 483
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 484 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 519
>gi|357112832|ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Brachypodium
distachyon]
Length = 226
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 167 IEKIGP-PEKVINAFGPEVIGENVEGKVLSMDVEELCGRKY--YRYELEPPHVLITA--- 220
I +GP E + N N + M + G+ Y + Y+LE P ++A
Sbjct: 126 IHDLGPMDETIFNLVNNVYAAPNQIPTIYDMQERTVDGKNYWTFEYDLEAPGYGVSAFAT 185
Query: 221 TAAGN-RLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A GN R Y VT N +W R LK +ADSF++
Sbjct: 186 VAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKI 221
>gi|356536494|ref|XP_003536772.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Glycine max]
Length = 234
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y + P +W E D S K R + +RF D I ++G
Sbjct: 94 YSYVYPIDWKEFDFRAHD-----------SAFKDRYLQLQNVRVRFIPTEKKD--IRELG 140
Query: 172 PPEKVI-NAFGPEVIGENVEGKVLSMDVEELCGRKYYRYE--LEPPH---VLITATAAGN 225
P E+V+ + N + M + + G+ YY +E L P+ A GN
Sbjct: 141 PMEEVVYDLVKHRYAAPNQRPTINDMQEKTIDGKHYYTFEYILTSPNYSSASFATIAIGN 200
Query: 226 -RLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
R Y V N +WKR LK +ADSFR++
Sbjct: 201 GRYYTLIVGANERRWKRFRDQLKVVADSFRLL 232
>gi|110289198|gb|ABG66119.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 536
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 423 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 482
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 483 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 518
>gi|425440192|ref|ZP_18820500.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9717]
gi|389719412|emb|CCH96737.1| Photosystem II oxygen-evolving complex 23K protein [Microcystis
aeruginosa PCC 9717]
Length = 182
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|428776864|ref|YP_007168651.1| photosystem II oxygen evolving complex protein PsbP [Halothece sp.
PCC 7418]
gi|428691143|gb|AFZ44437.1| photosystem II oxygen evolving complex protein PsbP [Halothece sp.
PCC 7418]
Length = 182
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P W EV V + G ++ R + + V++ V G+D ++ +G
Sbjct: 37 YQFLYPNGWQEVKVD-NNTAGVDVVFRDLVEQSENVSVVINQV-------GEDRKLQDLG 88
Query: 172 PP----EKVINAFGPEVIGENVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLITA 220
P +++ N P + +G++L D E G+ YY Y++ P H + +
Sbjct: 89 TPSDVGQRLKNTIAPP--NSDRKGELLRADELEKDGQTYYLLEYQVTFPDQRQRHNVASV 146
Query: 221 TAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ +L+ SV+ +W+ IADSF V
Sbjct: 147 AVSRGKLFTLSVSTPQNRWESLSERFNAIADSFEV 181
>gi|15233245|ref|NP_191093.1| PsbP-like protein 1 [Arabidopsis thaliana]
gi|9297075|sp|P82538.1|PPL1_ARATH RecName: Full=PsbP-like protein 1, chloroplastic; AltName:
Full=OEC23-like protein 4; AltName: Full=PsbP-related
thylakoid lumenal protein 2; Flags: Precursor
gi|16930399|gb|AAL31885.1|AF419553_1 AT3g55330/T26I12_210 [Arabidopsis thaliana]
gi|7019666|emb|CAB75767.1| putative protein [Arabidopsis thaliana]
gi|20453231|gb|AAM19854.1| AT3g55330/T26I12_210 [Arabidopsis thaliana]
gi|21593252|gb|AAM65201.1| unknown [Arabidopsis thaliana]
gi|332645848|gb|AEE79369.1| PsbP-like protein 1 [Arabidopsis thaliana]
Length = 230
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 166 TIEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYELE------PPHVLI 218
TI++ GPP+++ +V+ N + ++ ++ G+ YY++E H L
Sbjct: 132 TIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALG 191
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
T T Y + N +W++ L + DSF++
Sbjct: 192 TITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKI 228
>gi|115482366|ref|NP_001064776.1| Os10g0461100 [Oryza sativa Japonica Group]
gi|110289195|gb|ABG66116.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
gi|113639385|dbj|BAF26690.1| Os10g0461100 [Oryza sativa Japonica Group]
Length = 537
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 424 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 483
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 484 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 519
>gi|443646837|ref|ZP_21129515.1| psbP protein [Microcystis aeruginosa DIANCHI905]
gi|159028863|emb|CAO90668.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335666|gb|ELS50130.1| psbP protein [Microcystis aeruginosa DIANCHI905]
Length = 182
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDVK--KVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYY--RYEL-----EPPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY Y++ + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQIKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|425457013|ref|ZP_18836719.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
gi|389801727|emb|CCI19132.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
Length = 182
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDVK--KVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELE-------PPHVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLANGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|440751819|ref|ZP_20931022.1| psbP protein [Microcystis aeruginosa TAIHU98]
gi|440176312|gb|ELP55585.1| psbP protein [Microcystis aeruginosa TAIHU98]
Length = 182
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVEV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP-------HVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLVNGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|110289199|gb|AAP54144.2| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 352
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 237 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 296
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 297 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 332
>gi|307107046|gb|EFN55290.1| hypothetical protein CHLNCDRAFT_134225 [Chlorella variabilis]
Length = 227
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEI---------DLRFASPKKGRLFVIVAPVLRFADDLG 162
Y F+VP+ W E P+ + L G + +F K+G ++V + +
Sbjct: 88 YQFAVPESWSEAPL-LNPLTGNFCMPRCEEPWYEFKFEDGKEGTAQLVVTELQKLGAK-- 144
Query: 163 DDATIEKIGPPEKVINAFGPEVIGENV---EGKVLSMDVEELCGRKYYRYELEPPHVLIT 219
AT +G PE++I G + G V E V ++ + G YY YE
Sbjct: 145 RSATTADLGAPEQLIPRIGNFITGSFVPDEEDIVSAVPKKGADGLTYYVYE--------- 195
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
YLF VT N QW + L+ + +SF+
Sbjct: 196 ----EGLAYLFIVTANDKQWGAAESKLRTMLESFQA 227
>gi|22165105|gb|AAM93722.1| putative oxygen evolving complex protein [Oryza sativa Japonica
Group]
gi|22165114|gb|AAM93731.1| putative oxygen evolving complex protein [Oryza sativa Japonica
Group]
Length = 178
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 79 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 138
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 139 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 174
>gi|425450206|ref|ZP_18830038.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
gi|389769062|emb|CCI05990.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
Length = 182
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P+ W +V V + G ++ L VI+ PV D+ T+ +G
Sbjct: 37 YQFLYPKGWTQVDV--KKVAGVDVVFHDLIETSENLSVIINPV-------PDNKTLTDLG 87
Query: 172 PPEKV------INAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPP-------HVLI 218
P +V N+ P + + E +++ + ++ G+ YY E + H L
Sbjct: 88 TPSEVGYRLLKNNSLNPNL---DKEVELIRSESHQIDGQDYYILEYQVKLVNGQERHNLA 144
Query: 219 TATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ T ++LY F+++ + +W + + I DSF V
Sbjct: 145 SVTVNNHKLYSFNLSTSQKRWTQIQELFETIVDSFSV 181
>gi|222640410|gb|EEE68542.1| hypothetical protein OsJ_27001 [Oryza sativa Japonica Group]
Length = 244
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 145 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 204
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 205 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 240
>gi|38636895|dbj|BAD03159.1| oxygen evolving complex protein-like [Oryza sativa Japonica Group]
Length = 257
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 145 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 204
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 205 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 240
>gi|125532246|gb|EAY78811.1| hypothetical protein OsI_33914 [Oryza sativa Indica Group]
gi|125575051|gb|EAZ16335.1| hypothetical protein OsJ_31797 [Oryza sativa Japonica Group]
Length = 194
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 79 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 138
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 139 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 174
>gi|218192555|gb|EEC74982.1| hypothetical protein OsI_11024 [Oryza sativa Indica Group]
Length = 221
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 167 IEKIGP-PEKVINAFGPEVIGENVEGKVLSMDVEELCGRKY--YRYELEPPHVLITA--- 220
I +GP E + N N V M + G+ Y + Y+LE P ++A
Sbjct: 121 IRDLGPMDEAIFNLVNNVYAAPNQIPTVYDMQERTVDGKNYWTFEYDLEAPGYGVSAFAT 180
Query: 221 TAAGN-RLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A GN R Y VT N +W R LK +ADSF++
Sbjct: 181 VAIGNGRYYTLIVTANERRWSRLRNRLKVVADSFKL 216
>gi|297722003|ref|NP_001173365.1| Os03g0279950 [Oryza sativa Japonica Group]
gi|222624678|gb|EEE58810.1| hypothetical protein OsJ_10361 [Oryza sativa Japonica Group]
gi|255674406|dbj|BAH92093.1| Os03g0279950 [Oryza sativa Japonica Group]
Length = 232
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 167 IEKIGP-PEKVINAFGPEVIGENVEGKVLSMDVEELCGRKY--YRYELEPPHVLITA--- 220
I +GP E + N N V M + G+ Y + Y+LE P ++A
Sbjct: 132 IRDLGPMDEAIFNLVNNVYAAPNQIPTVYDMQERTVDGKNYWTFEYDLEAPGYGVSAFAT 191
Query: 221 TAAGN-RLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A GN R Y VT N +W R LK +ADSF++
Sbjct: 192 VAIGNGRYYTLIVTANERRWSRLRNRLKVVADSFKL 227
>gi|224123546|ref|XP_002330148.1| predicted protein [Populus trichocarpa]
gi|222871604|gb|EEF08735.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 20/105 (19%)
Query: 172 PPEKVINAFG-PEVIGE-----------NVEGKVLSMDVEELCGRK--YYRYEL--EPP- 214
PP+ I AFG P+ +GE +V+G + + E RK YY+ E E P
Sbjct: 162 PPDFSIEAFGGPKEVGEAVVRTITGSRLDVKGTLTESSLREDSLRKVNYYKLEFRVESPA 221
Query: 215 ---HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
H L A G RLY + W D +IADSF ++
Sbjct: 222 FHRHNLAVCCARGGRLYTLNAQAPESAWPNVKADFYRIADSFSII 266
>gi|412990432|emb|CCO19750.1| predicted protein [Bathycoccus prasinos]
Length = 397
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 44/166 (26%)
Query: 112 YLFSVPQEWDEVPVSIADLGG--------TEIDLRFASPKKGRLFVIVAPVLRFA----- 158
Y S P W E+PVS A G ++ F+ P +G L +I+ P +
Sbjct: 139 YSVSFPPRWKELPVSNAKSGNYCQPRCDEATTEVGFSDPAQGTLQIIIIPTTKLLISKKF 198
Query: 159 DDLGDDATIEKIGPPEKVINAFGPEVIGE--------------NVEGKVLSMDVEELCGR 204
+GD TI VINA P + G +G+V +++
Sbjct: 199 PSMGDVGTI------SNVINAISPAITGSVAAEEEEILDKEEFTEKGRVYYQVLQKPDNS 252
Query: 205 -----KYYRYELEPP------HVLITATAAGNRLYLFSVTGNGLQW 239
+Y+YEL P H + T + N + + S++ + QW
Sbjct: 253 LNFYLNFYKYELLTPFAETGLHNIAKITTSQNYVIMASISASEAQW 298
>gi|356568959|ref|XP_003552675.1| PREDICTED: uncharacterized protein LOC100305918 [Glycine max]
Length = 236
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I + G P++V +V+ N + K++ +++ G+KYY++E + P H L T
Sbjct: 138 ITEFGSPQEVAETLIKKVLAPPNQKTKIVEAKEQDVEGKKYYQFEFIAKAPNYTRHALST 197
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ + Y + N +W + L+ + +SF++
Sbjct: 198 VSIGNGKFYTLTTGANERRWDKMKDRLQTVIESFKI 233
>gi|297608449|ref|NP_001061609.2| Os08g0347500 [Oryza sativa Japonica Group]
gi|255678381|dbj|BAF23523.2| Os08g0347500 [Oryza sativa Japonica Group]
Length = 163
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGENVEG-KVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPP++V A +V+ + K++ ++ GR YY +E + P H L
Sbjct: 64 IRELGPPDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGA 123
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
A + Y + N +W++ L + DSF++
Sbjct: 124 IAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKI 159
>gi|255582372|ref|XP_002531975.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223528372|gb|EEF30411.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 180
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 163 DDATIEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYY--RYELEPPHV--- 216
D I +GP E+V++ V N ++ + G+ YY Y L P+
Sbjct: 78 DKQDIHDLGPMEQVVSDLVKHVYAAPNQRPTIIDIQERSADGKNYYTVEYILTSPNYSSA 137
Query: 217 -LITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
T + R Y V N +WKR LK +ADSF+++
Sbjct: 138 SFATIGISNGRYYTLIVGANERRWKRFRNQLKVVADSFKML 178
>gi|255582368|ref|XP_002531973.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223528370|gb|EEF30409.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 242
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYELEPP------HVLIT 219
I GPP++V +V+ + + K++ ++ G+ YY +E H L T
Sbjct: 144 IRDFGPPQQVAEVLIKKVLAPPSQKTKLIEASEHDVDGKTYYTFEFTARAPNYTRHALST 203
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ + Y + N +W + L +I DSF++
Sbjct: 204 ISIGNGKFYTLTTGANERRWDKMKDKLHEITDSFKI 239
>gi|302814400|ref|XP_002988884.1| hypothetical protein SELMODRAFT_447486 [Selaginella moellendorffii]
gi|300143455|gb|EFJ10146.1| hypothetical protein SELMODRAFT_447486 [Selaginella moellendorffii]
Length = 243
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 53 LISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPY 112
L+ S + P A+ ++ L +P ++P+ W Y+ G G+ IP
Sbjct: 51 LLPSPWMQMPMPAAALEQEEL---NIPKKNDPN--SWDEYQ---------GDGFGVKIPP 96
Query: 113 LFSVPQEWDEVPVSIADLGGTE-----IDLRFASPKKGRLFVIVAPVLRFADDLG----D 163
F E DE P+ L G RFAS + G FV V V+R A L +
Sbjct: 97 GFEDTLEPDEFPIGEVPLYGNRAKPKVFAARFAS-RDGEEFVSV--VIRRASQLKATFFE 153
Query: 164 DATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEP--PHVLITAT 221
+I+ +G + + F P +G + + V R YY YE HV+++A
Sbjct: 154 AKSIKDLGKVDDIAKLFLP--VGARLTA---ASSVTSEAQRVYYLYEYLAGSKHVVVSAA 208
Query: 222 AAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
A R+++ + T +WK+ L A SF ++
Sbjct: 209 AQSGRIFVAAATAPQSRWKKDGRLLSSAAASFYLL 243
>gi|302761514|ref|XP_002964179.1| hypothetical protein SELMODRAFT_405914 [Selaginella moellendorffii]
gi|300167908|gb|EFJ34512.1| hypothetical protein SELMODRAFT_405914 [Selaginella moellendorffii]
Length = 243
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 33/215 (15%)
Query: 53 LISSAVLGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPY 112
L+ S + P A+ ++ L +P ++P+ W Y+ G G+ IP
Sbjct: 51 LLPSLWMQMPMPAAALEQEEL---NIPKKNDPN--SWDEYQ---------GDGFGVKIPP 96
Query: 113 LFSVPQEWDEVPVSIADLGGTE-----IDLRFASPKKGRLFVIVAPVLRFADDLG----D 163
F E DE P+ L G RFAS + G FV V V+R A L +
Sbjct: 97 GFEDTLEPDEFPIGEVPLYGNRAKPKVFAARFAS-RDGEEFVSV--VIRRASQLKATFFE 153
Query: 164 DATIEKIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEP--PHVLITAT 221
+I +G + + F P +G + + V R YY YE HV+++A
Sbjct: 154 AKSITDLGKVDDIAKLFLP--VGARLTA---ASSVTSEAQRVYYLYEYLAGSKHVIVSAA 208
Query: 222 AAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
A R+++ + T +WK+ L A SF ++
Sbjct: 209 AQSGRIFVAAATAPQSRWKKDGRFLSSAAASFYLL 243
>gi|428203745|ref|YP_007082334.1| PsbP [Pleurocapsa sp. PCC 7327]
gi|427981177|gb|AFY78777.1| PsbP [Pleurocapsa sp. PCC 7327]
Length = 183
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFAS--PKKGRLFVIVAPVLRFADDLGDDATIEK 169
Y F P W EV + A E+D+ F + L VI++ V ++ T+
Sbjct: 37 YEFFYPNGWIEVNIQNA---SEEVDVVFRDLIQRTENLSVIISSV-------PENKTLTD 86
Query: 170 IGPPEKVINAFGPEVIGE---NVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLIT 219
+G P V F +V N E +++ + E G+ YY Y+++ P H + +
Sbjct: 87 LGTPTDVGYRFLKQVNNNPNANREAELIKAEARESNGKTYYTLEYQVKLPDNQERHDIAS 146
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ +LY F+++ + +W++ + + +SF +
Sbjct: 147 VAVSRGKLYTFNLSTDQKRWEKVKNLFETVVNSFSI 182
>gi|116781263|gb|ABK22029.1| unknown [Picea sitchensis]
gi|148908317|gb|ABR17272.1| unknown [Picea sitchensis]
Length = 239
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYEL--EPP----HVLIT 219
I ++GPPE+V +V+ + + K+L++ G+ YY +E + P H L T
Sbjct: 141 IHELGPPEQVAETLVRKVLSSPSQKTKLLNVKERTAEGKIYYTFEFVAQAPNYIRHALGT 200
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSF 253
+ Y + N +W + L+ + DSF
Sbjct: 201 VAIGNGKFYTLTTGANERRWSKIEEKLRTVIDSF 234
>gi|428223927|ref|YP_007108024.1| photosystem II oxygen evolving complex protein PsbP [Geitlerinema
sp. PCC 7407]
gi|427983828|gb|AFY64972.1| photosystem II oxygen evolving complex protein PsbP [Geitlerinema
sp. PCC 7407]
Length = 179
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P W V VS GG ++ + + V++ PV + T++ +G
Sbjct: 37 YEFLYPTGWVSVKVS----GGPDVVFHDLIEETENVSVVINPV-------EEGQTLQDLG 85
Query: 172 PPEKVINAFGPEVIGENVEGK---VLSMDVEELCGRKYY--RYELEPP----HVLITATA 222
P ++ +I G+ +++ + E G YY YE+E P H L +A
Sbjct: 86 TPSELGQRLAQSIISSVEAGRKAELVNAEARESQGITYYLLEYEVELPNQKRHNLASAAV 145
Query: 223 AGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ RL F+V+ +W + K + SF V
Sbjct: 146 SRGRLLTFNVSTPERRWPKMAERFKTVVSSFTV 178
>gi|159470481|ref|XP_001693388.1| thylakoid lumen protein [Chlamydomonas reinhardtii]
gi|158277646|gb|EDP03414.1| thylakoid lumen protein [Chlamydomonas reinhardtii]
Length = 248
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 13/172 (7%)
Query: 92 YRRPDDKSGGHGVGWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASP--KKGRLFV 149
Y P GG+G Y F P W E S + G +D R +P K R FV
Sbjct: 83 YATPPTSYGGYGGNAKEAPRYTFEYPAGWKEEIPSKVEKGTQGVDGRVVNPRGKDQRAFV 142
Query: 150 IVAPVLRFADDLGDDATIEKIGPPEKVINAF-GPEVIGENVEGKVL--SMDVEELCGRKY 206
+ G+D ++ + ++ F G + ++ + E+ G +
Sbjct: 143 VTLA------RAGEDNKSFRLTDLDSTLSGFAGADYDLQDALSSATNRTTSSREVGGATF 196
Query: 207 YRYELEPP--HVLITATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
Y Y++E P H L+ T + +++ V + + L+ I ++FR++
Sbjct: 197 YDYDIESPDYHYLVAITVSNGKVFSLFVRSPTKSFPANEAKLRHIVETFRLL 248
>gi|388521909|gb|AFK49016.1| unknown [Lotus japonicus]
Length = 102
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 13/64 (20%)
Query: 16 SSVENGISRVKAVACSTGSDSVDG--------VMKRRSVLVSGASLISSAVLGFPADGLA 67
SSV++GI R A + S + VDG ++ RR+VL SG SL L FP + LA
Sbjct: 33 SSVQDGILRTVAASGSKENCLVDGKTEKCPSLLVNRRAVLASGVSL-----LCFPGESLA 87
Query: 68 VVKQ 71
VVKQ
Sbjct: 88 VVKQ 91
>gi|308799187|ref|XP_003074374.1| unnamed protein product [Ostreococcus tauri]
gi|116000545|emb|CAL50225.1| unnamed protein product [Ostreococcus tauri]
Length = 199
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Query: 109 IIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIE 168
+ Y + VP W E S + G D RF K G + A L D A+
Sbjct: 46 LAKYSYEVPDGWVEEATSKVEKGSGGQDSRFV--KSGTKGAVKAYCLTLNPAGQDGASFA 103
Query: 169 KIGPPEKVINAFGPEVIGENVEGKVLSMDVEELCGRKYYRYELEPPHVLITATAAGN--R 226
+ + ++ G++ + +E GR+Y +E++ + + N R
Sbjct: 104 LTEAALQAVAGALSDMQDSITAGQISTKRAKE-DGREYALFEVDADRKYVVKISIDNTGR 162
Query: 227 LYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
L+ F +T Q+ R +++++A+SFRV
Sbjct: 163 LFAFVITAPASQFNRDKKNIERMANSFRV 191
>gi|302755416|ref|XP_002961132.1| hypothetical protein SELMODRAFT_74043 [Selaginella moellendorffii]
gi|300172071|gb|EFJ38671.1| hypothetical protein SELMODRAFT_74043 [Selaginella moellendorffii]
Length = 159
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYEL------EPPHVLIT 219
I GPP+K+ + + + + +V+ E G+ YY +E H L
Sbjct: 61 IHDFGPPDKLSKTLVEKFLTSPSQKTQVIEAKERETDGKPYYTFEFLAKDKTYTRHALAA 120
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
T A + Y N +W + L + DSFR++
Sbjct: 121 VTVANGKFYALVTGANERRWNKMRDRLHSVVDSFRLL 157
>gi|443312253|ref|ZP_21041872.1| PsbP [Synechocystis sp. PCC 7509]
gi|442777723|gb|ELR87997.1| PsbP [Synechocystis sp. PCC 7509]
Length = 181
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 112 YLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADDLGDDATIEKIG 171
Y F P W PV +A+ G ++ + V+V+PV + T+ ++G
Sbjct: 38 YEFLYPNGWQ--PVKVAN--GADVVFHDLIEISENVSVVVSPV-------ANGKTLAELG 86
Query: 172 PPEKVINAFGPEVIG---ENVEGKVLSMDVEELCGRKYY--RYELEPP-----HVLITAT 221
P +V I E ++++ E+ G+KYY Y ++ P H L +
Sbjct: 87 TPTEVGYKLSKSAIAPPDSGREAELVNAASREVKGKKYYLLEYAVKLPNQQERHNLASVA 146
Query: 222 AAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRV 255
+ +LY F+ + +W++ + + DSF V
Sbjct: 147 VSRGKLYTFNASTPERRWQKVQKQFESVVDSFLV 180
>gi|302766918|ref|XP_002966879.1| hypothetical protein SELMODRAFT_86878 [Selaginella moellendorffii]
gi|300164870|gb|EFJ31478.1| hypothetical protein SELMODRAFT_86878 [Selaginella moellendorffii]
Length = 159
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 167 IEKIGPPEKVINAFGPEVIGE-NVEGKVLSMDVEELCGRKYYRYEL------EPPHVLIT 219
I GPP+K+ + + + + +V+ E G+ YY +E H L
Sbjct: 61 IHDFGPPDKLSKTLVEKFLTSPSQKTQVIEAKERETDGKPYYTFEFLAKDKTYTRHALAA 120
Query: 220 ATAAGNRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256
T A + Y N +W + L + DSFR++
Sbjct: 121 VTVANGKFYALVTGANERRWNKMRDRLHSVVDSFRLL 157
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,429,847,169
Number of Sequences: 23463169
Number of extensions: 203218210
Number of successful extensions: 421039
Number of sequences better than 100.0: 183
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 420847
Number of HSP's gapped (non-prelim): 187
length of query: 256
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 117
effective length of database: 9,097,814,876
effective search space: 1064444340492
effective search space used: 1064444340492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)