Query 025186
Match_columns 256
No_of_seqs 192 out of 634
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 05:24:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025186.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025186hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dkta2 g.93.1.1 (A:82-137) RI 100.0 6.6E-31 4.8E-35 184.7 3.5 56 78-135 1-56 (56)
2 d2dkta1 g.89.1.1 (A:8-81) RING 99.5 5E-15 3.6E-19 108.6 2.7 61 9-77 3-74 (74)
3 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.5 6.9E-15 5.1E-19 100.6 2.2 49 141-189 2-50 (52)
4 d1iyma_ g.44.1.1 (A:) EL5 RING 99.4 3.5E-14 2.5E-18 98.3 3.1 48 140-189 6-54 (55)
5 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.4 1.3E-13 9.6E-18 98.0 4.0 51 139-189 3-54 (65)
6 d1chca_ g.44.1.1 (A:) Immediat 99.3 1.7E-13 1.3E-17 97.9 2.1 51 137-191 3-53 (68)
7 d1v87a_ g.44.1.1 (A:) Deltex p 99.3 6.6E-13 4.8E-17 102.8 3.2 56 135-190 21-94 (114)
8 d1fbva4 g.44.1.1 (A:356-434) C 99.2 1.2E-12 8.8E-17 96.3 3.4 50 137-190 21-70 (79)
9 d3dplr1 g.44.1.1 (R:19-106) RI 99.2 3.5E-12 2.6E-16 95.3 3.9 52 137-189 19-84 (88)
10 d1rmda2 g.44.1.1 (A:1-86) V(D) 98.9 2.3E-10 1.6E-14 85.7 2.6 47 140-190 24-70 (86)
11 d1jm7a_ g.44.1.1 (A:) brca1 RI 98.9 2.7E-10 2E-14 86.7 2.5 46 140-189 22-69 (103)
12 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.8 4.4E-10 3.2E-14 77.8 2.1 53 135-189 2-58 (60)
13 d1bora_ g.44.1.1 (A:) Acute pr 98.8 1.9E-10 1.4E-14 79.5 -0.0 43 139-189 6-48 (56)
14 d2baya1 g.44.1.2 (A:1-56) Pre- 98.8 3.8E-10 2.7E-14 77.5 0.6 45 141-189 2-46 (56)
15 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.7 1.3E-09 9.8E-14 81.9 1.2 45 139-189 22-66 (97)
16 d2c2la2 g.44.1.2 (A:225-304) S 98.7 3.6E-09 2.6E-13 76.9 3.2 49 137-189 5-53 (80)
17 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.6 6.8E-09 5E-13 75.0 3.4 49 137-189 6-54 (78)
18 d1wima_ g.44.1.1 (A:) UbcM4-in 98.4 3.7E-08 2.7E-12 72.9 2.4 48 137-185 3-57 (94)
19 d1wgma_ g.44.1.2 (A:) Ubiquiti 97.9 5.1E-06 3.7E-10 62.4 4.5 50 135-189 18-68 (98)
20 d2jnea1 g.41.18.1 (A:1-71) Hyp 89.5 0.017 1.2E-06 40.7 -1.4 67 138-233 1-70 (71)
21 d1we9a_ g.50.1.2 (A:) PHD fing 82.1 0.057 4.1E-06 36.2 -1.8 50 137-187 4-58 (64)
22 d2fcwb1 g.12.1.1 (B:86-124) Li 79.1 0.5 3.6E-05 28.9 2.1 33 111-144 5-39 (39)
23 d2dkta2 g.93.1.1 (A:82-137) RI 77.5 0.24 1.7E-05 33.1 0.2 29 80-108 18-46 (56)
24 d1f62a_ g.50.1.2 (A:) Williams 74.4 0.67 4.9E-05 29.2 1.8 45 141-187 2-50 (51)
25 d1vd4a_ g.41.3.1 (A:) Transcri 64.5 1.1 8.1E-05 30.2 1.2 11 93-103 36-46 (62)
26 d1weoa_ g.44.1.1 (A:) Cellulos 58.2 4.3 0.00031 29.1 3.5 55 135-189 12-69 (93)
27 d1wewa_ g.50.1.2 (A:) Sumoylat 55.9 0.66 4.8E-05 31.9 -1.3 48 139-189 16-74 (78)
28 d1mm2a_ g.50.1.2 (A:) Mi2-beta 55.4 1.8 0.00013 28.1 1.0 47 138-188 8-57 (61)
29 d1wila_ g.50.1.3 (A:) Hypothet 51.7 3.9 0.00029 29.1 2.4 32 137-173 13-47 (89)
30 d2co8a2 g.39.1.3 (A:8-43) Nedd 50.5 1.3 9.8E-05 26.8 -0.3 31 136-170 5-36 (36)
31 d2cs3a1 g.44.1.3 (A:8-87) Prot 47.3 5.1 0.00037 27.8 2.4 65 136-204 5-78 (80)
32 d2bi6h1 g.3.12.1 (H:8-31) Brom 47.2 3.1 0.00022 22.9 0.9 15 68-82 9-23 (26)
33 d1s3ga2 g.41.2.1 (A:126-160) M 41.5 4.2 0.00031 24.1 1.0 26 69-103 4-29 (35)
34 d1zina2 g.41.2.1 (A:126-160) M 41.4 4.5 0.00033 24.0 1.1 26 69-103 4-29 (35)
35 d1fp0a1 g.50.1.2 (A:19-88) Nuc 40.9 4.3 0.00031 27.0 1.1 30 160-189 24-56 (70)
36 d2d8ya1 g.39.1.3 (A:9-43) Epli 38.3 3.1 0.00023 24.9 0.0 29 138-170 6-35 (35)
37 d1wepa_ g.50.1.2 (A:) PHD fing 37.1 7.5 0.00055 26.2 1.9 47 142-189 14-65 (79)
38 d1weva_ g.50.1.2 (A:) PHD fing 37.0 2.1 0.00015 29.6 -1.1 49 139-187 16-72 (88)
39 d2j0151 g.41.8.5 (5:2-60) Ribo 34.9 5.6 0.00041 26.2 0.9 29 216-249 28-56 (59)
40 d1k81a_ g.59.1.1 (A:) Zinc-bin 34.1 7.9 0.00057 23.2 1.4 15 215-229 19-33 (36)
41 d2zjrz1 g.41.8.5 (Z:2-59) Ribo 34.0 9.6 0.0007 24.9 2.0 29 216-249 28-56 (58)
42 d2ak3a2 g.41.2.1 (A:125-161) M 32.3 6.7 0.00049 23.5 0.9 26 69-103 4-29 (37)
43 d1e4va2 g.41.2.1 (A:122-156) M 31.0 7.3 0.00053 23.0 0.9 26 69-103 4-29 (35)
44 d2vrda1 g.37.1.4 (A:1-61) Spli 30.4 2.8 0.0002 28.0 -1.3 23 77-99 1-25 (61)
45 d2adra1 g.37.1.1 (A:102-130) A 30.0 14 0.001 20.5 2.0 16 178-193 2-17 (29)
46 d1e7la2 d.4.1.5 (A:1-103) Reco 29.5 9.5 0.00069 27.7 1.4 21 170-190 12-32 (103)
47 d1akya2 g.41.2.1 (A:131-168) M 29.4 9.3 0.00067 22.9 1.1 27 69-104 4-30 (38)
48 d2fiya1 e.59.1.1 (A:19-308) Fd 29.4 11 0.00081 31.9 2.1 26 217-246 190-215 (290)
49 d6rxna_ g.41.5.1 (A:) Rubredox 29.1 10 0.00075 23.6 1.4 12 77-88 1-12 (45)
50 d1wiia_ g.41.3.4 (A:) Hypothet 29.0 15 0.0011 25.8 2.4 40 177-234 22-64 (85)
51 d2dlqa4 g.37.1.1 (A:8-34) GLI- 28.3 14 0.00099 20.4 1.6 15 180-196 2-16 (27)
52 d1neea2 g.59.1.1 (A:99-135) Zi 27.4 4.7 0.00034 24.4 -0.5 15 236-250 2-16 (37)
53 d1tbna_ g.49.1.1 (A:) Protein 24.9 17 0.0012 23.4 2.0 8 52-59 5-12 (66)
54 d1k3xa3 g.39.1.8 (A:223-262) E 24.6 16 0.0011 22.0 1.6 11 67-77 12-22 (40)
55 d1ajja_ g.12.1.1 (A:) Ligand-b 24.2 20 0.0015 21.0 2.0 31 111-142 4-36 (37)
56 d1x6ea2 g.37.1.1 (A:41-66) Zin 23.4 11 0.00083 20.8 0.7 9 96-104 2-10 (26)
57 d1dx8a_ g.41.5.1 (A:) Rubredox 23.1 22 0.0016 24.0 2.3 14 75-88 3-16 (70)
58 d1tota1 g.44.1.6 (A:1-52) CREB 23.0 17 0.0012 23.1 1.6 22 94-119 4-25 (52)
59 d1vfya_ g.50.1.1 (A:) vps27p p 22.4 18 0.0013 23.6 1.7 23 68-103 6-28 (67)
60 d1sp1a_ g.37.1.1 (A:) Transcri 22.4 14 0.0011 20.6 1.0 14 178-191 2-15 (29)
61 d1v5na_ g.49.1.3 (A:) Pdi-like 22.1 20 0.0015 24.9 2.0 12 111-122 59-70 (89)
62 d1dvpa2 g.50.1.1 (A:149-220) H 21.9 22 0.0016 23.6 2.1 24 68-104 14-37 (72)
63 d1xa6a3 g.49.1.1 (A:209-270) B 21.6 23 0.0017 22.4 2.2 12 111-122 30-41 (62)
64 d1iroa_ g.41.5.1 (A:) Rubredox 21.1 24 0.0017 22.5 2.0 12 77-88 1-12 (53)
65 d1wesa_ g.50.1.2 (A:) PHD Inhi 21.1 21 0.0016 23.6 1.9 43 140-187 17-65 (71)
66 d1f8za_ g.12.1.1 (A:) Ligand-b 20.8 26 0.0019 20.7 2.1 32 111-143 5-38 (39)
67 d1tdza3 g.39.1.8 (A:225-271) D 20.7 20 0.0015 22.0 1.6 19 67-85 18-44 (47)
68 d2dlqa2 g.37.1.1 (A:35-62) GLI 20.1 16 0.0011 20.3 0.8 12 114-125 2-13 (28)
69 d1k82a3 g.39.1.8 (A:225-268) D 20.0 22 0.0016 21.6 1.6 12 67-78 16-27 (44)
No 1
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.96 E-value=6.6e-31 Score=184.70 Aligned_cols=56 Identities=57% Similarity=1.450 Sum_probs=54.3
Q ss_pred ceeeCCccccccCCCCCCcccCCCCCccccCCccceeecCccCccccccccCcceeec
Q 025186 78 GEYFCDICKFYDDDIEKGQFHCDDCGICRIGGRENYFHCKRCGSCYSTSLRNNHLCIE 135 (256)
Q Consensus 78 ~~y~C~~C~l~dd~~~k~~yHC~~CgiCRvG~~~~ffHC~~C~~C~s~~l~~~H~C~e 135 (256)
|+|||+|||||||| |+||||++|||||||+++|||||++||+|||++|+++|+|+|
T Consensus 1 G~YfC~iC~l~ddd--k~~yHC~~CgiCRvG~~~~ffHC~~C~~C~~~~l~~~H~CiE 56 (56)
T d2dkta2 1 GEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIE 56 (56)
T ss_dssp CSEECSSSCCEECS--SSEEEETTTTEEEESCGGGEEEETTTTEEEEGGGSSSSCCSC
T ss_pred CceECCcCCcccCC--CCcccCCCCCceeecCCccccccCccccccCcccCCCccccC
Confidence 78999999999885 999999999999999999999999999999999999999997
No 2
>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=5e-15 Score=108.60 Aligned_cols=61 Identities=38% Similarity=0.951 Sum_probs=50.5
Q ss_pred ccCCCCccCCccccCCceeEcCcCCCeecCCcchhhhhccCCCCCCCceecchhhhhh-----------hhcccccCccc
Q 025186 9 ITFGKMGYGCKHYRRRCRIRAPCCNEIFDCRHCHNEAASMLRNPYDRHELVRQDVKQV-----------AQVCTNCGVNM 77 (256)
Q Consensus 9 ~~~~~~~~GC~HY~R~cki~apcC~~~y~CR~CHde~~~~~~~~~~~H~l~r~~v~~v-----------~~~C~~Cg~~f 77 (256)
.|..++.+||+||+|+|+|+|++||++|+|+.||++.. .|+++|++++++ .+.|++||..|
T Consensus 3 ~~~~~~~~gC~HY~r~~~l~C~~Cg~~~~C~~C~~~lt--------~H~~~~k~~~~l~CH~Cg~~~~~~~~C~~Cgs~F 74 (74)
T d2dkta1 3 RNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCHDTNE--------DHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLF 74 (74)
T ss_dssp CCCCCCSSSCSSCCCSEEEEETTTTEEESSHHHHHHTS--------SSCCCSSSCCCEEESSSCCEECSCSBCSSSCCBS
T ss_pred cCCCCCCCCCcccCcceEEEcCcCcCeeeCCCCCCccc--------ccccccccCCEEEeccCCCcccCCCcCCCCCCCC
Confidence 56778899999999999999999999999999999875 688888777665 45566666554
No 3
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=6.9e-15 Score=100.60 Aligned_cols=49 Identities=29% Similarity=0.556 Sum_probs=41.4
Q ss_pred CCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 141 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 141 ~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
+||||+|+|..+...+..++|||.||..|+++|++.++.+||+||+++.
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~ 50 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYP 50 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCS
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCC
Confidence 6999999965554445667999999999999999866778999999875
No 4
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.41 E-value=3.5e-14 Score=98.34 Aligned_cols=48 Identities=29% Similarity=0.776 Sum_probs=40.5
Q ss_pred CCCchhhhhhcccCCccEEe-ccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 140 HHCPICYEYLFDSLRNTTVM-KCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 140 ~~CPICle~lf~s~~~v~~L-pCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
..||||++++.+ .+.+..| +|||.||..|+.+|++ .+.+||+||++|+
T Consensus 6 ~~C~ICl~~~~~-~~~~~~l~~C~H~Fh~~Ci~~Wl~-~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 6 VECAVCLAELED-GEEARFLPRCGHGFHAECVDMWLG-SHSTCPLCRLTVV 54 (55)
T ss_dssp CCCTTTCCCCCT-TSCCEECSSSCCEECTTHHHHTTT-TCCSCSSSCCCSC
T ss_pred CCCeEECccccC-CCEEEEeCCCCCcccHHHHHHHHH-hCCcCCCCCCEeE
Confidence 469999999554 4567666 5999999999999998 5789999999875
No 5
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=1.3e-13 Score=97.96 Aligned_cols=51 Identities=25% Similarity=0.538 Sum_probs=42.6
Q ss_pred CCCCchhhhhhcccCCc-cEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 139 HHHCPICYEYLFDSLRN-TTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 139 ~~~CPICle~lf~s~~~-v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
+..||||++.++.+.+. +.+++|||.||..|+.+|+.+.+.+||+||+.+.
T Consensus 3 d~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~ 54 (65)
T d1g25a_ 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCcc
Confidence 57899999987665443 4567999999999999999766778999999875
No 6
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.32 E-value=1.7e-13 Score=97.94 Aligned_cols=51 Identities=25% Similarity=0.634 Sum_probs=42.9
Q ss_pred CCCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCccccch
Q 025186 137 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDM 191 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~dm 191 (256)
+....||||++.+. ++++.+||||.||..|+.+|++ .+.+||+||+.+.++
T Consensus 3 ~~~d~C~IC~~~~~---~~~~~~~C~H~Fc~~Ci~~w~~-~~~~CP~CR~~i~~~ 53 (68)
T d1chca_ 3 TVAERCPICLEDPS---NYSMALPCLHAFCYVCITRWIR-QNPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCCSSCCSCCC---SCEEETTTTEEESTTHHHHHHH-HSCSTTTTCCCCCCE
T ss_pred CCCCCCccCCcCcc---CCcEEeCCCCcCcHHHHHHHHH-hCCcCCCCCcchHhh
Confidence 45678999999853 3677899999999999999998 468999999988654
No 7
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.27 E-value=6.6e-13 Score=102.76 Aligned_cols=56 Identities=25% Similarity=0.482 Sum_probs=43.6
Q ss_pred cCCCCCCCchhhhhhccc--------------CCccEEeccCCccChhhHHHHhcCC----CCCCCCCCccccc
Q 025186 135 ENSMHHHCPICYEYLFDS--------------LRNTTVMKCGHTMHCECYHEMIKRD----KYCCPICSKSVID 190 (256)
Q Consensus 135 e~~~~~~CPICle~lf~s--------------~~~v~~LpCGH~~H~~Cl~~~~~~~----~~~CPiCrksv~d 190 (256)
+...+..|+||+|.|... ...+.+++|||+||..||.+|+++. +.+||+||..+..
T Consensus 21 ~~~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T d1v87a_ 21 KVAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SSCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred cccccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhcc
Confidence 345567899999998642 2245678999999999999999742 4689999988764
No 8
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.2e-12 Score=96.30 Aligned_cols=50 Identities=26% Similarity=0.596 Sum_probs=41.6
Q ss_pred CCCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCccccc
Q 025186 137 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 190 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~d 190 (256)
+....||||+|.+ . ..+++||||.||..|+..|++.++.+||+||+.|..
T Consensus 21 ~~~~~C~IC~~~~-~---~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~ 70 (79)
T d1fbva4 21 STFQLCKICAEND-K---DVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 70 (79)
T ss_dssp CCTTBCTTTSSSB-C---CEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCC
T ss_pred CCCCCCccCCCcC-C---CeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccC
Confidence 3445799999974 2 467899999999999999998666789999999974
No 9
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=3.5e-12 Score=95.26 Aligned_cols=52 Identities=21% Similarity=0.506 Sum_probs=39.6
Q ss_pred CCCCCCchhhhhhccc--------------CCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 137 SMHHHCPICYEYLFDS--------------LRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 137 ~~~~~CPICle~lf~s--------------~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
..+.+|+||++.+.+. ...+..++|||.||..||.+||+ .+.+||+||+...
T Consensus 19 ~~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-~~~~CP~CR~~~~ 84 (88)
T d3dplr1 19 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-TRQVCPLDNREWE 84 (88)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-TCSBCSSSCSBCC
T ss_pred CCCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHH-HCCcCCCCCCccc
Confidence 3455677777664332 22467789999999999999998 5789999998865
No 10
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.89 E-value=2.3e-10 Score=85.72 Aligned_cols=47 Identities=23% Similarity=0.487 Sum_probs=39.5
Q ss_pred CCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCccccc
Q 025186 140 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVID 190 (256)
Q Consensus 140 ~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~d 190 (256)
..||||+|.+ . ..++++|||+|.+.|+.+|++..+.+||+||.++..
T Consensus 24 l~C~IC~~~~-~---~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~ 70 (86)
T d1rmda2 24 ISCQICEHIL-A---DPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (86)
T ss_dssp TBCTTTCSBC-S---SEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cCCccCCcch-h---cceecCCCChhhHHHHHHHHhhCCCcCcccCCCCCh
Confidence 5799999975 2 346789999999999999997566789999998763
No 11
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=2.7e-10 Score=86.65 Aligned_cols=46 Identities=26% Similarity=0.747 Sum_probs=37.5
Q ss_pred CCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCC--CCCCCCCCcccc
Q 025186 140 HHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRD--KYCCPICSKSVI 189 (256)
Q Consensus 140 ~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~--~~~CPiCrksv~ 189 (256)
..||||++.+ . +|+ .++|||+|+..|+.+|+... ..+||+||+++.
T Consensus 22 l~CpIC~~~~-~--~pv-~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (103)
T d1jm7a_ 22 LECPICLELI-K--EPV-STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (103)
T ss_dssp TSCSSSCCCC-S--SCC-BCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred cCCCccCchh-C--CeE-EcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCC
Confidence 5799999964 3 344 48999999999999999643 368999999885
No 12
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.83 E-value=4.4e-10 Score=77.84 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=38.0
Q ss_pred cCCCCCCCchhhhhhcccCCccEE---eccCCccChhhHHHHhcC-CCCCCCCCCcccc
Q 025186 135 ENSMHHHCPICYEYLFDSLRNTTV---MKCGHTMHCECYHEMIKR-DKYCCPICSKSVI 189 (256)
Q Consensus 135 e~~~~~~CPICle~lf~s~~~v~~---LpCGH~~H~~Cl~~~~~~-~~~~CPiCrksv~ 189 (256)
|+.....|+||+|++-+ ..+.. ..|+|.||..||.+|+.. ++.+||+||+.+.
T Consensus 2 eded~~~C~IC~~~~~~--~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 2 EDEDVPVCWICNEELGN--ERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp TTCSCCEETTTTEECSC--CCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCCCccCCccCCC--ceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 45566789999997422 12222 234699999999999953 4679999998753
No 13
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=1.9e-10 Score=79.53 Aligned_cols=43 Identities=23% Similarity=0.540 Sum_probs=35.2
Q ss_pred CCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 139 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 139 ~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
...||||++.+ . ..++|||||+||..|++.| +.+||+||+.+.
T Consensus 6 ~l~C~IC~~~~-~---~p~~lpCgH~fC~~Ci~~~----~~~CP~Cr~~~~ 48 (56)
T d1bora_ 6 FLRCQQCQAEA-K---CPKLLPCLHTLCSGCLEAS----GMQCPICQAPWP 48 (56)
T ss_dssp CSSCSSSCSSC-B---CCSCSTTSCCSBTTTCSSS----SSSCSSCCSSSS
T ss_pred CCCCcccCccc-C---CCEEecCCCHHhHHHHHcC----CCcCcCCCCccc
Confidence 45899999974 3 3467899999999998755 568999999886
No 14
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.79 E-value=3.8e-10 Score=77.53 Aligned_cols=45 Identities=18% Similarity=0.176 Sum_probs=38.4
Q ss_pred CCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 141 HCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 141 ~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
.||||++.| . ++|....|||+|++.|+.+|++ .+.+||+||+.+.
T Consensus 2 ~C~Ic~~~~-~--~Pv~~~~cGh~fc~~cI~~~l~-~~~~CP~c~~~l~ 46 (56)
T d2baya1 2 LCAISGKVP-R--RPVLSPKSRTIFEKSLLEQYVK-DTGNDPITNEPLS 46 (56)
T ss_dssp CCTTTCSCC-S--SEEEETTTTEEEEHHHHHHHHH-HHSBCTTTCCBCC
T ss_pred CCccCCchH-H--hcCccCCCCCcccHHHHHHHHh-hccCCCccCCcCC
Confidence 599999964 3 4676678999999999999998 4679999999876
No 15
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=1.3e-09 Score=81.87 Aligned_cols=45 Identities=22% Similarity=0.556 Sum_probs=37.5
Q ss_pred CCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 139 HHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 139 ~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
...||||++.| . +++...+|||+|+..|+.+|+. .+||+||+.+.
T Consensus 22 ~l~C~IC~~~~-~--~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~ 66 (97)
T d1jm7b_ 22 LLRCSRCTNIL-R--EPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAW 66 (97)
T ss_dssp TTSCSSSCSCC-S--SCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCS
T ss_pred cCCCccCCchh-h--cCceeCCCCCchhHHHHHHHHh---ccccccCCcCc
Confidence 45899999975 3 4677779999999999999985 46999998775
No 16
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.69 E-value=3.6e-09 Score=76.91 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=40.9
Q ss_pred CCCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 137 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
..+..||||++-| . +|| .++|||+|.+.|+.+|+...+.+||+|+..+.
T Consensus 5 P~~l~CpIc~~l~-~--dPv-~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~ 53 (80)
T d2c2la2 5 PDYLCGKISFELM-R--EPC-ITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 53 (80)
T ss_dssp CSTTBCTTTCSBC-S--SEE-ECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred CccccCcCcCchh-h--hhc-ccCCcCeecHHHHHHHHhcCCccCCCcccccc
Confidence 3567899999864 4 355 68999999999999999766788999999876
No 17
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.63 E-value=6.8e-09 Score=74.96 Aligned_cols=49 Identities=18% Similarity=0.449 Sum_probs=41.1
Q ss_pred CCCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 137 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
..+..||||++.|.+ +| +++|||+|.+.|+.+|+..+..+||+|+..+.
T Consensus 6 P~~l~CpIc~~~m~d---PV-~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~ 54 (78)
T d1t1ha_ 6 PEYFRCPISLELMKD---PV-IVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSSCTTTSCCCSS---EE-EETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred CccCCCcCcCchhhC---ce-EccCCCcchHHHHHHHHHHCCCCCCcccccCC
Confidence 356789999997533 55 67999999999999999866788999999886
No 18
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=3.7e-08 Score=72.92 Aligned_cols=48 Identities=19% Similarity=0.414 Sum_probs=36.3
Q ss_pred CCCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcC-------CCCCCCCCC
Q 025186 137 SMHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKR-------DKYCCPICS 185 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~-------~~~~CPiCr 185 (256)
+....||||++++ ...+.+..++|||.|+..|+.+|++. ...+||.|+
T Consensus 3 ~~~~~C~IC~~~~-~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~ 57 (94)
T d1wima_ 3 SGSSGCKLCLGEY-PVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA 57 (94)
T ss_dssp CSBCCCSSSCCCC-BGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTT
T ss_pred CCCCcCccCCCcc-cCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCC
Confidence 3457899999985 33344566789999999999999962 135799865
No 19
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.88 E-value=5.1e-06 Score=62.40 Aligned_cols=50 Identities=10% Similarity=0.093 Sum_probs=39.9
Q ss_pred cCCCCCCCchhhhhhcccCCccEEeccC-CccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 135 ENSMHHHCPICYEYLFDSLRNTTVMKCG-HTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 135 e~~~~~~CPICle~lf~s~~~v~~LpCG-H~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
+...+..||||++-| . +.++++|| |+|-+.||.+|+. .+.+||+|++.+.
T Consensus 18 ~~P~~f~CPI~~~lm-~---dPV~~~~~~~ty~r~~I~~~l~-~~~~~P~~~~~l~ 68 (98)
T d1wgma_ 18 DACDEFLDPIMSTLM-C---DPVVLPSSRVTVDRSTIARHLL-SDQTDPFNRSPLT 68 (98)
T ss_dssp SCCTTTBCTTTCSBC-S---SEEECTTTCCEEEHHHHHHHTT-TSCBCTTTCSBCC
T ss_pred CCcHHhCCcCchhHH-H---HHHhcccccchhhHHHHHHHHH-hcCCccccccccc
Confidence 334578999999965 3 34577765 6899999999998 5789999999986
No 20
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=89.53 E-value=0.017 Score=40.74 Aligned_cols=67 Identities=25% Similarity=0.444 Sum_probs=47.8
Q ss_pred CCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhcCCCCCCCCCCccccchhHHhHHHHHHHHhcCCChhhhcCeeE
Q 025186 138 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSRTWKRIDEEIEATVMPEDYRHKKVW 217 (256)
Q Consensus 138 ~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~~~~~~CPiCrksv~dm~~~~~~lD~~i~~~pmP~~y~~~~v~ 217 (256)
|+..||.|.-+|-... ||+....|-..+.. .-.||-|++.+..+.+ =--|+
T Consensus 1 m~~~CP~C~~eL~~~~--------~~~~C~~C~~~~~~--~a~CPdC~~~Le~LkA-------------------CGAvd 51 (71)
T d2jnea1 1 MELHCPQCQHVLDQDN--------GHARCRSCGEFIEM--KALCPDCHQPLQVLKA-------------------CGAVD 51 (71)
T ss_dssp CCCBCSSSCSBEEEET--------TEEEETTTCCEEEE--EEECTTTCSBCEEEEE-------------------TTEEE
T ss_pred CCCcCCCccCcccccC--------CCEehhhhhhhhee--EEeCCccccHHHHHHh-------------------ccchh
Confidence 5678999998864421 56666667666654 4689999998875432 12479
Q ss_pred EEccCCC---CcceeeeeE
Q 025186 218 ILCNDCN---DTTEVYFHI 233 (256)
Q Consensus 218 I~CnDC~---~~s~~~fH~ 233 (256)
+.||.|+ +|+.|.|++
T Consensus 52 YFC~~cn~LiSKkrv~f~~ 70 (71)
T d2jnea1 52 YFCQHGHGLISKKRVEFVL 70 (71)
T ss_dssp EEETTTTEEECTTTSEEEE
T ss_pred hhhccCCceeEeeeEEEEe
Confidence 9999999 577888864
No 21
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=82.11 E-value=0.057 Score=36.16 Aligned_cols=50 Identities=22% Similarity=0.407 Sum_probs=33.2
Q ss_pred CCCCCCchhhhhhcccCCccEE-eccCCccChhhHHHHhc----CCCCCCCCCCcc
Q 025186 137 SMHHHCPICYEYLFDSLRNTTV-MKCGHTMHCECYHEMIK----RDKYCCPICSKS 187 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~-LpCGH~~H~~Cl~~~~~----~~~~~CPiCrks 187 (256)
+....|+||.+. .+.....+. -.|+..||..|+..-.. ...|.||.|+..
T Consensus 4 ~~~~~C~~C~~~-~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 4 GSSGQCGACGES-YAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCC-CCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCcCcCcCCC-CCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 456789999875 333233222 37899999999964211 246889998754
No 22
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density lipoprotein receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.05 E-value=0.5 Score=28.93 Aligned_cols=33 Identities=27% Similarity=0.765 Sum_probs=27.9
Q ss_pred cceeecCccCcccccccc--CcceeecCCCCCCCch
Q 025186 111 ENYFHCKRCGSCYSTSLR--NNHLCIENSMHHHCPI 144 (256)
Q Consensus 111 ~~ffHC~~C~~C~s~~l~--~~H~C~e~~~~~~CPI 144 (256)
.+.|+|.. |.|++.++. +..-|..++.+.+|||
T Consensus 5 ~~~f~C~~-g~CI~~~~~CDg~~DC~DgsDE~~Cpv 39 (39)
T d2fcwb1 5 QAEFRCHD-GKCISRQFVCDSDRDCLDGSDEASCPV 39 (39)
T ss_dssp TTEEECTT-SCEEEGGGTTSSSCCSTTCTTTTTHHH
T ss_pred CCCEEcCC-CCEEcchhcCcCcCcCcCCchhcCCCC
Confidence 45899987 899999875 6677889999999997
No 23
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.45 E-value=0.24 Score=33.15 Aligned_cols=29 Identities=28% Similarity=0.777 Sum_probs=19.4
Q ss_pred eeCCccccccCCCCCCcccCCCCCccccC
Q 025186 80 YFCDICKFYDDDIEKGQFHCDDCGICRIG 108 (256)
Q Consensus 80 y~C~~C~l~dd~~~k~~yHC~~CgiCRvG 108 (256)
|-|+.|.+=--...++-|||+.||+|-.-
T Consensus 18 yHC~~CgiCRvG~~~~ffHC~~C~~C~~~ 46 (56)
T d2dkta2 18 YHCESCGICRIGPKEDFFHCLKCNLCLTT 46 (56)
T ss_dssp EEETTTTEEEESCGGGEEEETTTTEEEEG
T ss_pred ccCCCCCceeecCCccccccCccccccCc
Confidence 55555444432345789999999999643
No 24
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.39 E-value=0.67 Score=29.16 Aligned_cols=45 Identities=18% Similarity=0.581 Sum_probs=29.2
Q ss_pred CCchhhhhhcccCCccEE-eccCCccChhhHHHHhc---CCCCCCCCCCcc
Q 025186 141 HCPICYEYLFDSLRNTTV-MKCGHTMHCECYHEMIK---RDKYCCPICSKS 187 (256)
Q Consensus 141 ~CPICle~lf~s~~~v~~-LpCGH~~H~~Cl~~~~~---~~~~~CPiCrks 187 (256)
.|.||... +....++. =.|.-.||..|++.-+. ...+.||.|+..
T Consensus 2 ~C~vC~~~--~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~~ 50 (51)
T d1f62a_ 2 RCKVCRKK--GEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCS--SCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCcCcCCC--CCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcCc
Confidence 47777653 11122222 26889999999988664 246789999854
No 25
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.47 E-value=1.1 Score=30.22 Aligned_cols=11 Identities=36% Similarity=0.890 Sum_probs=5.4
Q ss_pred CCCcccCCCCC
Q 025186 93 EKGQFHCDDCG 103 (256)
Q Consensus 93 ~k~~yHC~~Cg 103 (256)
....|+|..|+
T Consensus 36 ~~~~F~C~~C~ 46 (62)
T d1vd4a_ 36 MTGTFRCTFCH 46 (62)
T ss_dssp TTTEEBCSSSC
T ss_pred CCCeEEecCCC
Confidence 34555555543
No 26
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=58.21 E-value=4.3 Score=29.10 Aligned_cols=55 Identities=20% Similarity=0.448 Sum_probs=41.5
Q ss_pred cCCCCCCCchhhhhhcccCCccEEe---ccCCccChhhHHHHhcCCCCCCCCCCcccc
Q 025186 135 ENSMHHHCPICYEYLFDSLRNTTVM---KCGHTMHCECYHEMIKRDKYCCPICSKSVI 189 (256)
Q Consensus 135 e~~~~~~CPICle~lf~s~~~v~~L---pCGH~~H~~Cl~~~~~~~~~~CPiCrksv~ 189 (256)
.+.....|-||.|.+-...+.-.+. -|+--+.+.||+--++.++..||.|+....
T Consensus 12 ~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 12 KNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred hhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence 4456778999999864433333333 578999999999888888999999997665
No 27
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=55.89 E-value=0.66 Score=31.92 Aligned_cols=48 Identities=21% Similarity=0.470 Sum_probs=30.9
Q ss_pred CCCCchhhhhhcccCCccEEe---ccCCccChhhHHH----Hh----cCCCCCCCCCCcccc
Q 025186 139 HHHCPICYEYLFDSLRNTTVM---KCGHTMHCECYHE----MI----KRDKYCCPICSKSVI 189 (256)
Q Consensus 139 ~~~CPICle~lf~s~~~v~~L---pCGH~~H~~Cl~~----~~----~~~~~~CPiCrksv~ 189 (256)
...| ||.+.. +. ...+.+ .|...||..|+.- +. ....|.||.|+.+-.
T Consensus 16 ~~~C-~C~~~~-~~-~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T d1wewa_ 16 KVRC-VCGNSL-ET-DSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCC-SSCCCC-CC-SCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred ccEe-ECCCcc-CC-CcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcCC
Confidence 3567 898863 22 344555 4999999999842 10 012599999986543
No 28
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.44 E-value=1.8 Score=28.13 Aligned_cols=47 Identities=17% Similarity=0.481 Sum_probs=29.8
Q ss_pred CCCCCchhhhhhcccCCccEEeccCCccChhhHHHHhc---CCCCCCCCCCccc
Q 025186 138 MHHHCPICYEYLFDSLRNTTVMKCGHTMHCECYHEMIK---RDKYCCPICSKSV 188 (256)
Q Consensus 138 ~~~~CPICle~lf~s~~~v~~LpCGH~~H~~Cl~~~~~---~~~~~CPiCrksv 188 (256)
....|.||.+. .+-+.==.|.-.||..|+...+. ...+.||.|+-+.
T Consensus 8 ~~~~C~~C~~~----g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~ 57 (61)
T d1mm2a_ 8 HMEFCRVCKDG----GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCC----SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CcCCCcCCCCC----CeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCcc
Confidence 34457777642 12111126889999999976554 2478899997544
No 29
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.70 E-value=3.9 Score=29.13 Aligned_cols=32 Identities=19% Similarity=0.591 Sum_probs=24.5
Q ss_pred CCCCCCchhhhhhcccCCccEEec---cCCccChhhHHHH
Q 025186 137 SMHHHCPICYEYLFDSLRNTTVMK---CGHTMHCECYHEM 173 (256)
Q Consensus 137 ~~~~~CPICle~lf~s~~~v~~Lp---CGH~~H~~Cl~~~ 173 (256)
.++..|+|| ..|++.. ++| ||-.||..||...
T Consensus 13 ~~D~mC~vC--~v~t~~~---l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 13 VNDEMCDVC--EVWTAES---LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTT--CCCCSSC---CSSCSSSSSCCCHHHHHHH
T ss_pred CcCcccccc--Ccccccc---eecceeecchhhHHHHHHh
Confidence 457789999 3577533 446 5899999999997
No 30
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.55 E-value=1.3 Score=26.79 Aligned_cols=31 Identities=26% Similarity=0.604 Sum_probs=19.7
Q ss_pred CCCCCCCchhhhhhcccCCccEEecc-CCccChhhH
Q 025186 136 NSMHHHCPICYEYLFDSLRNTTVMKC-GHTMHCECY 170 (256)
Q Consensus 136 ~~~~~~CPICle~lf~s~~~v~~LpC-GH~~H~~Cl 170 (256)
......|.+|...++ ++-.|.. |++||+.||
T Consensus 5 ~g~~~~C~~C~K~VY----~~Erl~a~g~~yHk~CF 36 (36)
T d2co8a2 5 AGAGDLCALCGEHLY----VLERLCVNGHFFHRSCF 36 (36)
T ss_dssp CCSSCBCSSSCCBCC----TTTBCCBTTBCCBTTTC
T ss_pred CCCCCcccccCCEEe----eeeEEEecCcEeccccC
Confidence 345567777776543 3444544 788888885
No 31
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.31 E-value=5.1 Score=27.77 Aligned_cols=65 Identities=32% Similarity=0.563 Sum_probs=41.7
Q ss_pred CCCCCCCchhhhhhcccCCccEEecc----CCccChhhHHHHhcC----CCCCCCCCCcccc-chhHHhHHHHHHHHh
Q 025186 136 NSMHHHCPICYEYLFDSLRNTTVMKC----GHTMHCECYHEMIKR----DKYCCPICSKSVI-DMSRTWKRIDEEIEA 204 (256)
Q Consensus 136 ~~~~~~CPICle~lf~s~~~v~~LpC----GH~~H~~Cl~~~~~~----~~~~CPiCrksv~-dm~~~~~~lD~~i~~ 204 (256)
++....|.+|.|.|-+ .....| +|-|.-.|-++.++. +..-||.=.|-.+ .-..-|.-+..||++
T Consensus 5 ~~~~l~CtlC~erLEd----tHFVQCPsv~~HkFCFpCsr~sik~q~~~~evyCPSG~kCpL~gs~~PWAFmqgEI~t 78 (80)
T d2cs3a1 5 NSGPLCCTICHERLED----THFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIAT 78 (80)
T ss_dssp SCCSCCCSSSCSCCSS----TTSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTTSSCCBCSSSSSBCCCCHHHHHH
T ss_pred CCCceeeeeehhhhcC----CceEeCCCCcCCceeccccHHHHHhcCCCCcEECCCCCccccCCCCCChHHhhchhhh
Confidence 4556789999998754 345555 799999999999872 1233444433332 222247777777765
No 32
>d2bi6h1 g.3.12.1 (H:8-31) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=47.20 E-value=3.1 Score=22.89 Aligned_cols=15 Identities=33% Similarity=1.161 Sum_probs=12.7
Q ss_pred hcccccCcccceeeC
Q 025186 68 QVCTNCGVNMGEYFC 82 (256)
Q Consensus 68 ~~C~~Cg~~f~~y~C 82 (256)
-.|..|.+.||+|.|
T Consensus 9 gfcktckaefgkyic 23 (26)
T d2bi6h1 9 GFCKTCKAEFGKYIC 23 (26)
T ss_dssp TTCSSBCCBTTBCCB
T ss_pred hHHHHHHHHhCceee
Confidence 357889999999987
No 33
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=41.52 E-value=4.2 Score=24.13 Aligned_cols=26 Identities=27% Similarity=0.623 Sum_probs=17.2
Q ss_pred cccccCcccceeeCCccccccCCCCCCcccCCCCC
Q 025186 69 VCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCG 103 (256)
Q Consensus 69 ~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cg 103 (256)
+|.+||..+-.+| .+.|..--||.||
T Consensus 4 ~C~~CG~~Yh~~~---------~pPk~~g~CD~cg 29 (35)
T d1s3ga2 4 ICKVCGTSYHLLF---------NPPQVEGKCDKDG 29 (35)
T ss_dssp EETTTCCEEETTT---------BCCSBTTBCTTTC
T ss_pred CCcCcCchhcccc---------CCCCCCCccCCCC
Confidence 4666666665544 4667777788877
No 34
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=41.35 E-value=4.5 Score=24.03 Aligned_cols=26 Identities=35% Similarity=0.795 Sum_probs=16.6
Q ss_pred cccccCcccceeeCCccccccCCCCCCcccCCCCC
Q 025186 69 VCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCG 103 (256)
Q Consensus 69 ~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cg 103 (256)
+|.+||..+-.+| .+.|..--||.||
T Consensus 4 ~C~~CG~~Yh~~~---------~pPk~~g~CD~cG 29 (35)
T d1zina2 4 ICRNCGATYHLIF---------HPPAKPGVCDKCG 29 (35)
T ss_dssp EETTTCCEEETTT---------BCCSSTTBCTTTC
T ss_pred CCcCcCchhcccc---------CCCCCCCcCCCCC
Confidence 4566666554443 4677777788877
No 35
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.86 E-value=4.3 Score=26.97 Aligned_cols=30 Identities=17% Similarity=0.607 Sum_probs=23.0
Q ss_pred ccCCccChhhHHHHhc---CCCCCCCCCCcccc
Q 025186 160 KCGHTMHCECYHEMIK---RDKYCCPICSKSVI 189 (256)
Q Consensus 160 pCGH~~H~~Cl~~~~~---~~~~~CPiCrksv~ 189 (256)
.|.-.||..|+...+. .....||.|+....
T Consensus 24 ~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 24 QCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp TSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence 6889999999986654 24678999976543
No 36
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.29 E-value=3.1 Score=24.85 Aligned_cols=29 Identities=14% Similarity=0.429 Sum_probs=17.4
Q ss_pred CCCCCchhhhhhcccCCccEEecc-CCccChhhH
Q 025186 138 MHHHCPICYEYLFDSLRNTTVMKC-GHTMHCECY 170 (256)
Q Consensus 138 ~~~~CPICle~lf~s~~~v~~LpC-GH~~H~~Cl 170 (256)
....|.+|...+ .++-.|.+ |.+||+.||
T Consensus 6 ~~~kC~~C~K~V----Y~~E~~~a~g~~~Hk~CF 35 (35)
T d2d8ya1 6 ARETCVECQKTV----YPMERLLANQQVFHISCF 35 (35)
T ss_dssp SSCBCTTTCCBC----CTTSEEECSSSEEETTTC
T ss_pred CCcccccCCCEE----eeeeeEecCCeehhhccC
Confidence 345677776653 33445555 677777774
No 37
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.13 E-value=7.5 Score=26.24 Aligned_cols=47 Identities=19% Similarity=0.301 Sum_probs=29.2
Q ss_pred CchhhhhhcccCCccEE-eccCCccChhhHHH---Hhc-CCCCCCCCCCcccc
Q 025186 142 CPICYEYLFDSLRNTTV-MKCGHTMHCECYHE---MIK-RDKYCCPICSKSVI 189 (256)
Q Consensus 142 CPICle~lf~s~~~v~~-LpCGH~~H~~Cl~~---~~~-~~~~~CPiCrksv~ 189 (256)
+-||.+. ++.....+. =.|.=.||..|+.. -+. ...|.||.|+....
T Consensus 14 ~CiC~~~-~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~g 65 (79)
T d1wepa_ 14 YCLCRQP-YNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CSTTSCS-CCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred EeECCCc-cCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCcC
Confidence 3388764 332222222 26899999999952 222 24699999987654
No 38
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.04 E-value=2.1 Score=29.59 Aligned_cols=49 Identities=18% Similarity=0.480 Sum_probs=30.1
Q ss_pred CCCCchhhhhhcccCCccEE-eccCCccChhhHHHHh-----c--CCCCCCCCCCcc
Q 025186 139 HHHCPICYEYLFDSLRNTTV-MKCGHTMHCECYHEMI-----K--RDKYCCPICSKS 187 (256)
Q Consensus 139 ~~~CPICle~lf~s~~~v~~-LpCGH~~H~~Cl~~~~-----~--~~~~~CPiCrks 187 (256)
...|.||.....+....++. =.|+-.||..|+...+ . ...+.||.|...
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~ 72 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred cCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCch
Confidence 45699998643222122222 2689999999976322 1 236789999654
No 39
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=34.95 E-value=5.6 Score=26.18 Aligned_cols=29 Identities=24% Similarity=0.632 Sum_probs=22.1
Q ss_pred eEEEccCCCCcceeeeeEeeecCCCCCCcccccc
Q 025186 216 VWILCNDCNDTTEVYFHIIGQKCSHCKSYNTRSI 249 (256)
Q Consensus 216 v~I~CnDC~~~s~~~fH~lg~kC~~C~SyNT~~~ 249 (256)
..+.|..||+. ...|. -|++||-|+-+++
T Consensus 28 ~l~~C~~CG~~--~~pHr---vC~~CG~YkGr~V 56 (59)
T d2j0151 28 TLVPCPECKAM--KPPHT---VCPECGYYAGRKV 56 (59)
T ss_dssp CCBCCSSSSSC--BCTTC---BCTTTCCSSSCCS
T ss_pred ceeECCCCCCc--cccee---ECCCCCeECCEEe
Confidence 35789999973 33453 5999999999986
No 40
>d1k81a_ g.59.1.1 (A:) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=34.11 E-value=7.9 Score=23.16 Aligned_cols=15 Identities=13% Similarity=0.417 Sum_probs=9.1
Q ss_pred eeEEEccCCCCccee
Q 025186 215 KVWILCNDCNDTTEV 229 (256)
Q Consensus 215 ~v~I~CnDC~~~s~~ 229 (256)
.-.+.|+.||++..|
T Consensus 19 ~~~l~C~aCGa~r~V 33 (36)
T d1k81a_ 19 VHLLKCMACGAIRPI 33 (36)
T ss_dssp EEEEEEETTTEEEEE
T ss_pred EEEEEeccCCCCCcc
Confidence 345667777766554
No 41
>d2zjrz1 g.41.8.5 (Z:2-59) Ribosomal protein L32p {Deinococcus radiodurans [TaxId: 1299]}
Probab=33.97 E-value=9.6 Score=24.90 Aligned_cols=29 Identities=24% Similarity=0.658 Sum_probs=22.3
Q ss_pred eEEEccCCCCcceeeeeEeeecCCCCCCcccccc
Q 025186 216 VWILCNDCNDTTEVYFHIIGQKCSHCKSYNTRSI 249 (256)
Q Consensus 216 v~I~CnDC~~~s~~~fH~lg~kC~~C~SyNT~~~ 249 (256)
..+.|..||+. ...| .-|+.||-||-+++
T Consensus 28 ~l~~C~~CG~~--~lpH---rvC~~CG~YkGr~V 56 (58)
T d2zjrz1 28 NLTECPQCHGK--KLSH---HICPNCGYYDGRQV 56 (58)
T ss_dssp CCEECTTTCCE--ECTT---BCCTTTCBSSSBCS
T ss_pred ceeECCCCCCC--ccce---eeCCCCCcCCCEEe
Confidence 45789999973 3344 46999999999886
No 42
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=32.29 E-value=6.7 Score=23.49 Aligned_cols=26 Identities=19% Similarity=0.041 Sum_probs=16.5
Q ss_pred cccccCcccceeeCCccccccCCCCCCcccCCCCC
Q 025186 69 VCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCG 103 (256)
Q Consensus 69 ~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cg 103 (256)
+|.+||..+-.+| .+.|..--||.||
T Consensus 4 vc~~cG~~Yh~~~---------~pPk~~g~CD~cg 29 (37)
T d2ak3a2 4 IHPGSGRVYNIEF---------NPPKTMGIDDLTG 29 (37)
T ss_dssp EETTTTEEEETTT---------BCCSSTTBCTTTC
T ss_pred eeCCcCChhhhcc---------CCccccCCccCCC
Confidence 4556665554433 4677777788887
No 43
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=30.99 E-value=7.3 Score=22.99 Aligned_cols=26 Identities=23% Similarity=0.086 Sum_probs=15.2
Q ss_pred cccccCcccceeeCCccccccCCCCCCcccCCCCC
Q 025186 69 VCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCG 103 (256)
Q Consensus 69 ~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cg 103 (256)
+|.+||..+-.+| .+.|..--||.||
T Consensus 4 ~c~~cG~~Yh~~~---------~PPk~~g~CD~cg 29 (35)
T d1e4va2 4 VHAPSGRVYHVKF---------NPPKVEGKDDVTG 29 (35)
T ss_dssp EETTTTEEEETTT---------BCCSSTTBCTTTC
T ss_pred CCcCcCChhhhcc---------CccccCCcccCCC
Confidence 3555555553333 4567677777776
No 44
>d2vrda1 g.37.1.4 (A:1-61) Spliceosomal protein U1C {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.41 E-value=2.8 Score=28.05 Aligned_cols=23 Identities=35% Similarity=0.870 Sum_probs=15.3
Q ss_pred cceeeCCcccccc--CCCCCCcccC
Q 025186 77 MGEYFCDICKFYD--DDIEKGQFHC 99 (256)
Q Consensus 77 f~~y~C~~C~l~d--d~~~k~~yHC 99 (256)
|++|||+=|+-|- |.++-.-.|.
T Consensus 1 MpryyCdYC~~~lt~ds~s~RK~H~ 25 (61)
T d2vrda1 1 MPKFYCDYCDTYLTHDSPSVRKTHC 25 (61)
T ss_dssp CCSCEETTTTEECSCCSHHHHHHHT
T ss_pred CCchhhhhhcchhccCChhHHHHHh
Confidence 7899999998773 4343334554
No 45
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=30.00 E-value=14 Score=20.55 Aligned_cols=16 Identities=13% Similarity=0.727 Sum_probs=12.4
Q ss_pred CCCCCCCCccccchhH
Q 025186 178 KYCCPICSKSVIDMSR 193 (256)
Q Consensus 178 ~~~CPiCrksv~dm~~ 193 (256)
-|.||+|.|++...+.
T Consensus 2 p~~C~~C~k~F~~~~~ 17 (29)
T d2adra1 2 SFVCEVCTRAFARQEH 17 (29)
T ss_dssp CBCCTTTCCCBSCHHH
T ss_pred cCCCCCCCCCCCCchH
Confidence 4789999999985443
No 46
>d1e7la2 d.4.1.5 (A:1-103) Recombination endonuclease VII, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=29.53 E-value=9.5 Score=27.70 Aligned_cols=21 Identities=14% Similarity=0.352 Sum_probs=15.6
Q ss_pred HHHHhcCCCCCCCCCCccccc
Q 025186 170 YHEMIKRDKYCCPICSKSVID 190 (256)
Q Consensus 170 l~~~~~~~~~~CPiCrksv~d 190 (256)
++++++.++.+||||+.++..
T Consensus 12 ~~~l~~~Q~g~C~IC~~~~~~ 32 (103)
T d1e7la2 12 KQKFYDAQNGKCLICQRELNP 32 (103)
T ss_dssp HHHHHHHTTTBCTTTCCBCCS
T ss_pred HHHHHHHhCCcCCCCCCCccc
Confidence 345666678899999987754
No 47
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.41 E-value=9.3 Score=22.95 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=15.8
Q ss_pred cccccCcccceeeCCccccccCCCCCCcccCCCCCc
Q 025186 69 VCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGI 104 (256)
Q Consensus 69 ~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cgi 104 (256)
+|.+||..+-.+| .+.|..--||.||-
T Consensus 4 ~C~~cG~~Yh~~~---------~ppk~~g~CD~cg~ 30 (38)
T d1akya2 4 IHPASGRSYHKIF---------NPPKEDMKDDVTGE 30 (38)
T ss_dssp ECTTTCCEEETTT---------BCCSSTTBCTTTCC
T ss_pred CCcCccchhhhhc---------cCcCcCCccCCCCC
Confidence 3555555554433 35666777877773
No 48
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=29.38 E-value=11 Score=31.86 Aligned_cols=26 Identities=31% Similarity=0.835 Sum_probs=19.8
Q ss_pred EEEccCCCCcceeeeeEeeecCCCCCCccc
Q 025186 217 WILCNDCNDTTEVYFHIIGQKCSHCKSYNT 246 (256)
Q Consensus 217 ~I~CnDC~~~s~~~fH~lg~kC~~C~SyNT 246 (256)
...|.-|+ ..+|+.-.||++|++-+.
T Consensus 190 ~l~C~~C~----teW~~~R~~C~~Cg~~~~ 215 (290)
T d2fiya1 190 YLSCSLCA----CEWHYVRIKCSHCEESKH 215 (290)
T ss_dssp EEEETTTC----CEEECCTTSCSSSCCCSC
T ss_pred EEECCCCC----CccccccccCCCCCCCCC
Confidence 67888888 667888888888886543
No 49
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=29.09 E-value=10 Score=23.59 Aligned_cols=12 Identities=33% Similarity=1.165 Sum_probs=9.8
Q ss_pred cceeeCCccccc
Q 025186 77 MGEYFCDICKFY 88 (256)
Q Consensus 77 f~~y~C~~C~l~ 88 (256)
|.+|-|.+|.+.
T Consensus 1 M~~y~C~~Cgyi 12 (45)
T d6rxna_ 1 MQKYVCNVCGYE 12 (45)
T ss_dssp CCCEEETTTCCE
T ss_pred CCCeEeCCCCeE
Confidence 678999999654
No 50
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.95 E-value=15 Score=25.83 Aligned_cols=40 Identities=23% Similarity=0.533 Sum_probs=27.5
Q ss_pred CCCCCCCCCc--ccc-chhHHhHHHHHHHHhcCCChhhhcCeeEEEccCCCCcceeeeeEe
Q 025186 177 DKYCCPICSK--SVI-DMSRTWKRIDEEIEATVMPEDYRHKKVWILCNDCNDTTEVYFHII 234 (256)
Q Consensus 177 ~~~~CPiCrk--sv~-dm~~~~~~lD~~i~~~pmP~~y~~~~v~I~CnDC~~~s~~~fH~l 234 (256)
..++||.|.. +|. .|.. ...+..|.|.-|+...+...+.|
T Consensus 22 t~F~CPfCnh~~sV~vk~dk------------------k~~~g~l~C~vCg~~~~~~i~~L 64 (85)
T d1wiia_ 22 TQFTCPFCNHEKSCDVKMDR------------------ARNTGVISCTVCLEEFQTPITYL 64 (85)
T ss_dssp SCCCCTTTCCSSCEEEEEET------------------TTTEEEEEESSSCCEEEEECCSS
T ss_pred ceEcCCCCCCCCeEEEEEEe------------------cCCEEEEEEecCCCeEEeccccc
Confidence 4699999994 443 3322 33578899999998776665543
No 51
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.26 E-value=14 Score=20.42 Aligned_cols=15 Identities=33% Similarity=0.844 Sum_probs=11.3
Q ss_pred CCCCCCccccchhHHhH
Q 025186 180 CCPICSKSVIDMSRTWK 196 (256)
Q Consensus 180 ~CPiCrksv~dm~~~~~ 196 (256)
.||+|.|++. +.|+-
T Consensus 2 qcp~c~k~f~--skyyl 16 (27)
T d2dlqa4 2 ECPTCHKKFL--SKYYL 16 (27)
T ss_dssp CCTTTCCCCS--SHHHH
T ss_pred cCcchHHHHH--HhHhh
Confidence 6999999998 34543
No 52
>d1neea2 g.59.1.1 (A:99-135) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=27.40 E-value=4.7 Score=24.35 Aligned_cols=15 Identities=33% Similarity=0.625 Sum_probs=12.1
Q ss_pred ecCCCCCCccccccC
Q 025186 236 QKCSHCKSYNTRSIA 250 (256)
Q Consensus 236 ~kC~~C~SyNT~~~~ 250 (256)
..|+.|+|.||+.++
T Consensus 2 V~C~~C~spDT~l~k 16 (37)
T d1neea2 2 VICHECNRPDTRIIR 16 (37)
T ss_dssp HHHTCCSSCSSCCEE
T ss_pred eECCCCCCCCCEEEE
Confidence 368889999998875
No 53
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}
Probab=24.86 E-value=17 Score=23.44 Aligned_cols=8 Identities=25% Similarity=0.746 Sum_probs=4.2
Q ss_pred CCCCceec
Q 025186 52 PYDRHELV 59 (256)
Q Consensus 52 ~~~~H~l~ 59 (256)
+...|.+.
T Consensus 5 p~~~H~F~ 12 (66)
T d1tbna_ 5 PRNKHKFR 12 (66)
T ss_dssp CCCSCCEE
T ss_pred CCCCCceE
Confidence 34456665
No 54
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=24.65 E-value=16 Score=21.97 Aligned_cols=11 Identities=27% Similarity=0.875 Sum_probs=7.4
Q ss_pred hhcccccCccc
Q 025186 67 AQVCTNCGVNM 77 (256)
Q Consensus 67 ~~~C~~Cg~~f 77 (256)
++.|..||...
T Consensus 12 g~pC~~C~~~I 22 (40)
T d1k3xa3 12 GEPCERCGSII 22 (40)
T ss_dssp TSBCTTTCCBC
T ss_pred CCccCcCCCEE
Confidence 56677777665
No 55
>d1ajja_ g.12.1.1 (A:) Ligand-binding domain of low-density lipoprotein receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.22 E-value=20 Score=21.01 Aligned_cols=31 Identities=32% Similarity=0.676 Sum_probs=21.0
Q ss_pred cceeecCccCcccccccc--CcceeecCCCCCCC
Q 025186 111 ENYFHCKRCGSCYSTSLR--NNHLCIENSMHHHC 142 (256)
Q Consensus 111 ~~ffHC~~C~~C~s~~l~--~~H~C~e~~~~~~C 142 (256)
.+.|.|.. |.|++.+++ +.--|..++.+.+|
T Consensus 4 ~~~f~C~~-g~Ci~~~~~CDg~~DC~dgsDE~~C 36 (37)
T d1ajja_ 4 AFEFHCLS-GECIHSSWRCDGGPDCKDKSDEENC 36 (37)
T ss_dssp TTCEECTT-SCEECGGGTTSSSCCSTTCGGGTTC
T ss_pred CCceEcCC-CCEECchhcCCCCCcCCCCchhhcc
Confidence 35788877 788888765 44556666666665
No 56
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.43 E-value=11 Score=20.76 Aligned_cols=9 Identities=33% Similarity=1.173 Sum_probs=5.9
Q ss_pred cccCCCCCc
Q 025186 96 QFHCDDCGI 104 (256)
Q Consensus 96 ~yHC~~Cgi 104 (256)
||.|+.||-
T Consensus 2 Py~C~eCgK 10 (26)
T d1x6ea2 2 PYKCLECGK 10 (26)
T ss_dssp CEECSSSCC
T ss_pred CccCCCCcC
Confidence 677777763
No 57
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=23.11 E-value=22 Score=23.99 Aligned_cols=14 Identities=29% Similarity=1.028 Sum_probs=11.5
Q ss_pred cccceeeCCccccc
Q 025186 75 VNMGEYFCDICKFY 88 (256)
Q Consensus 75 ~~f~~y~C~~C~l~ 88 (256)
+.+|+|-|.+|.+.
T Consensus 3 ~~~~ky~C~~Cgyi 16 (70)
T d1dx8a_ 3 IDEGKYECEACGYI 16 (70)
T ss_dssp CCSSCEEETTTCCE
T ss_pred ccCCeEEcCCCCeE
Confidence 56899999999654
No 58
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.97 E-value=17 Score=23.05 Aligned_cols=22 Identities=23% Similarity=0.850 Sum_probs=11.2
Q ss_pred CCcccCCCCCccccCCccceeecCcc
Q 025186 94 KGQFHCDDCGICRIGGRENYFHCKRC 119 (256)
Q Consensus 94 k~~yHC~~CgiCRvG~~~~ffHC~~C 119 (256)
+-.|+|+.|+. -+|. -|||..|
T Consensus 4 ~~~~tCd~C~~-~i~~---Ry~C~~C 25 (52)
T d1tota1 4 RFVYTCNECKH-HVET---RWHCTVC 25 (52)
T ss_dssp SSCEEETTTTE-EESS---EEEESSS
T ss_pred ceEEECcCCCC-cCCC---ceECCCC
Confidence 44566666653 2332 3566554
No 59
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.38 E-value=18 Score=23.63 Aligned_cols=23 Identities=26% Similarity=0.885 Sum_probs=15.8
Q ss_pred hcccccCcccceeeCCccccccCCCCCCcccCCCCC
Q 025186 68 QVCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCG 103 (256)
Q Consensus 68 ~~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cg 103 (256)
..|..|++.|+ || +...||-.||
T Consensus 6 ~~C~~C~~~F~--------~~-----~rkhhCr~CG 28 (67)
T d1vfya_ 6 DACMICSKKFS--------LL-----NRKHHCRSCG 28 (67)
T ss_dssp SBCTTTCCBCB--------TT-----BCCEECTTTC
T ss_pred cccccCCCccc--------Cc-----ccccccccCC
Confidence 45888888874 22 3568888887
No 60
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.37 E-value=14 Score=20.58 Aligned_cols=14 Identities=36% Similarity=0.975 Sum_probs=11.5
Q ss_pred CCCCCCCCccccch
Q 025186 178 KYCCPICSKSVIDM 191 (256)
Q Consensus 178 ~~~CPiCrksv~dm 191 (256)
.|.|++|.|++..-
T Consensus 2 py~C~~C~k~F~~~ 15 (29)
T d1sp1a_ 2 KFACPECPKRFMRS 15 (29)
T ss_dssp CSCCTTTTCCCSCS
T ss_pred CEECCcCCCeecch
Confidence 48999999999843
No 61
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.11 E-value=20 Score=24.89 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=7.6
Q ss_pred cceeecCccCcc
Q 025186 111 ENYFHCKRCGSC 122 (256)
Q Consensus 111 ~~ffHC~~C~~C 122 (256)
.-+|+|..|+.=
T Consensus 59 g~~Y~C~~C~f~ 70 (89)
T d1v5na_ 59 IWSYHCDECDFD 70 (89)
T ss_dssp SCEEECTTTCCC
T ss_pred CcEeEeccCCCE
Confidence 346777777643
No 62
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=21.93 E-value=22 Score=23.56 Aligned_cols=24 Identities=33% Similarity=0.870 Sum_probs=16.5
Q ss_pred hcccccCcccceeeCCccccccCCCCCCcccCCCCCc
Q 025186 68 QVCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGI 104 (256)
Q Consensus 68 ~~C~~Cg~~f~~y~C~~C~l~dd~~~k~~yHC~~Cgi 104 (256)
..|..|++.|+.. +...||..||.
T Consensus 14 ~~C~~C~~~F~~~-------------~rrhhCr~CG~ 37 (72)
T d1dvpa2 14 RVCHRCRVEFTFT-------------NRKHHCRNCGQ 37 (72)
T ss_dssp SBCTTTCCBCCSS-------------SCCEECTTTCC
T ss_pred CccccCCCcccCc-------------cccccccccCC
Confidence 4688888887432 45678877774
No 63
>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.64 E-value=23 Score=22.41 Aligned_cols=12 Identities=25% Similarity=0.636 Sum_probs=5.8
Q ss_pred cceeecCccCcc
Q 025186 111 ENYFHCKRCGSC 122 (256)
Q Consensus 111 ~~ffHC~~C~~C 122 (256)
..-|.|..|+.-
T Consensus 30 ~~g~~C~~C~~~ 41 (62)
T d1xa6a3 30 AQGVRCSDCGLN 41 (62)
T ss_dssp TCEECCSSSCCC
T ss_pred cCeEEcCCCCch
Confidence 344555555543
No 64
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=21.14 E-value=24 Score=22.50 Aligned_cols=12 Identities=33% Similarity=1.093 Sum_probs=9.8
Q ss_pred cceeeCCccccc
Q 025186 77 MGEYFCDICKFY 88 (256)
Q Consensus 77 f~~y~C~~C~l~ 88 (256)
|.+|-|.+|.+.
T Consensus 1 M~ky~C~~Cgyi 12 (53)
T d1iroa_ 1 MKKYTCTVCGYI 12 (53)
T ss_dssp CCCEEETTTCCE
T ss_pred CCCeEcCCCCcE
Confidence 678999999654
No 65
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.08 E-value=21 Score=23.63 Aligned_cols=43 Identities=21% Similarity=0.552 Sum_probs=26.4
Q ss_pred CCCchhhhhhcccCCccEEec---c-CCccChhhHHHHhc--CCCCCCCCCCcc
Q 025186 140 HHCPICYEYLFDSLRNTTVMK---C-GHTMHCECYHEMIK--RDKYCCPICSKS 187 (256)
Q Consensus 140 ~~CPICle~lf~s~~~v~~Lp---C-GH~~H~~Cl~~~~~--~~~~~CPiCrks 187 (256)
.-| ||.+.. + ...+..- | .-.||..|+. +.. ...+.||.|+..
T Consensus 17 ~~C-iC~~~~-~--~~~i~c~~~~C~~~wfH~~Cvg-l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 17 TYC-LCNQVS-Y--GEMIGCDNEQCPIEWFHFSCVS-LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp CCS-TTCCCC-C--SSEECCSCTTCSCCCEETTTTT-CSSCCSSCCCCTTTSSC
T ss_pred CEE-EeCCCC-C--CCEEEEECCCCCCcCccCccCC-CCcCCCCcEECcCCccc
Confidence 445 898752 2 2233332 4 4689999985 222 247899999754
No 66
>d1f8za_ g.12.1.1 (A:) Ligand-binding domain of low-density lipoprotein receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.76 E-value=26 Score=20.73 Aligned_cols=32 Identities=25% Similarity=0.499 Sum_probs=22.5
Q ss_pred cceeecCccCcccccccc--CcceeecCCCCCCCc
Q 025186 111 ENYFHCKRCGSCYSTSLR--NNHLCIENSMHHHCP 143 (256)
Q Consensus 111 ~~ffHC~~C~~C~s~~l~--~~H~C~e~~~~~~CP 143 (256)
.++|.|.. |.|++.++. +..-|..++.+.+|.
T Consensus 5 ~~~f~C~~-g~CI~~~~~CDg~~DC~DgsDE~~C~ 38 (39)
T d1f8za_ 5 PDEFQCSD-GNCIHGSRQCDREYDCKDMSDEVGCV 38 (39)
T ss_dssp TTEEECSS-SCEEETTTSSSCCCCSTTSGGGSSSC
T ss_pred CCceEeCC-CCeEChhhcCCCCCcCCCCchhccCc
Confidence 35888887 789998865 455666666666663
No 67
>d1tdza3 g.39.1.8 (A:225-271) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=20.66 E-value=20 Score=22.03 Aligned_cols=19 Identities=37% Similarity=1.263 Sum_probs=11.9
Q ss_pred hhcccccCccc--------ceeeCCcc
Q 025186 67 AQVCTNCGVNM--------GEYFCDIC 85 (256)
Q Consensus 67 ~~~C~~Cg~~f--------~~y~C~~C 85 (256)
++.|..|+... +.|||+.|
T Consensus 18 g~~C~~C~~~I~~~~~~gR~t~~Cp~C 44 (47)
T d1tdza3 18 GEKCSRCGAEIQKIKVAGRGTHFCPVC 44 (47)
T ss_dssp TSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred CCCcCCCCcEEEEEEECCcccEECccc
Confidence 45677776654 45666665
No 68
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.13 E-value=16 Score=20.32 Aligned_cols=12 Identities=50% Similarity=1.539 Sum_probs=8.7
Q ss_pred eecCccCccccc
Q 025186 114 FHCKRCGSCYST 125 (256)
Q Consensus 114 fHC~~C~~C~s~ 125 (256)
|.|.+||-||=.
T Consensus 2 f~c~kcgkcyfr 13 (28)
T d2dlqa2 2 FECPKCGKCYFR 13 (28)
T ss_dssp CBCTTTCCBCSS
T ss_pred Cccccchhhhhh
Confidence 667788888754
No 69
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=20.04 E-value=22 Score=21.63 Aligned_cols=12 Identities=25% Similarity=0.720 Sum_probs=7.7
Q ss_pred hhcccccCcccc
Q 025186 67 AQVCTNCGVNMG 78 (256)
Q Consensus 67 ~~~C~~Cg~~f~ 78 (256)
+..|..||....
T Consensus 16 g~~C~~C~~~I~ 27 (44)
T d1k82a3 16 GEPCRVCGTPIV 27 (44)
T ss_dssp TSBCTTTCCBCE
T ss_pred CCCcCCCCCEEE
Confidence 456777776653
Done!