Query 025190
Match_columns 256
No_of_seqs 138 out of 1468
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 03:28:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025190.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025190hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 4E-30 8.6E-35 194.1 19.2 221 3-231 13-235 (244)
2 PRK13288 pyrophosphatase PpaX; 100.0 2.2E-30 4.7E-35 205.7 13.3 197 4-224 2-211 (214)
3 TIGR01993 Pyr-5-nucltdase pyri 100.0 7.2E-29 1.5E-33 192.5 19.5 184 6-200 1-184 (184)
4 PRK13478 phosphonoacetaldehyde 100.0 2.1E-29 4.6E-34 206.4 16.9 206 2-232 1-263 (267)
5 PLN02770 haloacid dehalogenase 100.0 1.4E-29 3.1E-34 205.0 15.6 193 3-219 20-231 (248)
6 PRK13226 phosphoglycolate phos 100.0 1.7E-29 3.8E-34 202.3 15.1 196 4-223 11-224 (229)
7 COG0546 Gph Predicted phosphat 100.0 2.4E-29 5.1E-34 200.2 15.7 199 3-224 2-218 (220)
8 PLN02575 haloacid dehalogenase 100.0 5E-29 1.1E-33 209.2 18.3 204 1-228 127-347 (381)
9 TIGR02253 CTE7 HAD superfamily 100.0 7.1E-29 1.5E-33 198.0 16.9 198 5-219 2-220 (221)
10 TIGR03351 PhnX-like phosphonat 100.0 4.3E-29 9.3E-34 199.1 15.5 196 5-223 1-219 (220)
11 TIGR01422 phosphonatase phosph 100.0 7.5E-29 1.6E-33 201.8 16.4 195 4-223 1-252 (253)
12 PLN03243 haloacid dehalogenase 100.0 1E-28 2.2E-33 200.5 16.3 202 3-227 22-238 (260)
13 PRK10826 2-deoxyglucose-6-phos 100.0 9E-29 2E-33 197.5 15.7 195 3-221 5-217 (222)
14 PRK11587 putative phosphatase; 100.0 1.7E-28 3.8E-33 195.2 17.0 191 4-220 2-204 (218)
15 TIGR01449 PGP_bact 2-phosphogl 100.0 2.7E-28 5.8E-33 193.6 16.1 191 8-222 1-212 (213)
16 PRK13222 phosphoglycolate phos 100.0 1.1E-27 2.5E-32 191.7 17.9 199 3-225 4-223 (226)
17 PRK14988 GMP/IMP nucleotidase; 100.0 2.2E-27 4.7E-32 189.3 18.4 202 3-226 8-221 (224)
18 PRK10725 fructose-1-P/6-phosph 100.0 4.2E-28 9.1E-33 188.8 13.7 176 1-201 1-186 (188)
19 TIGR02254 YjjG/YfnB HAD superf 100.0 2.8E-27 6.1E-32 189.1 18.5 198 5-223 1-224 (224)
20 TIGR01454 AHBA_synth_RP 3-amin 100.0 6.8E-28 1.5E-32 190.1 13.9 192 8-223 1-203 (205)
21 PLN02940 riboflavin kinase 100.0 1.4E-27 3E-32 203.9 14.7 193 4-220 10-217 (382)
22 COG0637 Predicted phosphatase/ 100.0 1.4E-27 3.1E-32 189.7 13.8 177 4-204 1-189 (221)
23 PRK09449 dUMP phosphatase; Pro 100.0 5.7E-27 1.2E-31 187.4 17.3 122 88-224 93-223 (224)
24 PRK13223 phosphoglycolate phos 100.0 2E-27 4.2E-32 194.8 15.0 199 3-224 11-230 (272)
25 PRK10563 6-phosphogluconate ph 100.0 1.3E-27 2.8E-32 190.7 13.5 201 3-223 2-212 (221)
26 PRK13225 phosphoglycolate phos 100.0 2.9E-27 6.2E-32 193.1 15.7 197 4-228 61-272 (273)
27 TIGR01428 HAD_type_II 2-haloal 99.9 1.6E-26 3.4E-31 181.4 15.5 105 87-205 89-196 (198)
28 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.4E-26 5.3E-31 178.4 13.1 170 5-200 1-185 (185)
29 PRK10748 flavin mononucleotide 99.9 9.2E-26 2E-30 181.8 16.6 199 4-223 9-238 (238)
30 COG1011 Predicted hydrolase (H 99.9 9.1E-26 2E-30 181.0 16.5 123 88-224 97-227 (229)
31 TIGR01990 bPGM beta-phosphoglu 99.9 2.5E-26 5.3E-31 178.4 12.2 171 7-201 1-185 (185)
32 PLN02779 haloacid dehalogenase 99.9 1.1E-25 2.4E-30 185.5 14.0 199 3-221 38-270 (286)
33 PRK06698 bifunctional 5'-methy 99.9 1.1E-25 2.3E-30 197.5 14.6 201 4-226 240-456 (459)
34 TIGR02252 DREG-2 REG-2-like, H 99.9 4.3E-25 9.3E-30 173.9 16.0 173 6-199 1-203 (203)
35 PF13419 HAD_2: Haloacid dehal 99.9 6.9E-26 1.5E-30 173.8 7.6 172 8-200 1-176 (176)
36 PLN02919 haloacid dehalogenase 99.9 6.7E-24 1.4E-28 200.7 15.0 194 3-220 73-286 (1057)
37 TIGR02247 HAD-1A3-hyp Epoxide 99.9 7.1E-24 1.5E-28 167.9 12.0 102 88-203 92-198 (211)
38 PHA02597 30.2 hypothetical pro 99.9 1E-23 2.2E-28 165.3 11.5 180 4-220 1-195 (197)
39 TIGR00338 serB phosphoserine p 99.9 2.9E-23 6.3E-28 165.4 13.3 194 2-217 11-211 (219)
40 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 3.4E-24 7.3E-29 165.9 7.7 97 89-200 84-183 (183)
41 PRK09456 ?-D-glucose-1-phospha 99.9 2E-22 4.4E-27 158.1 16.2 120 66-203 64-187 (199)
42 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.3E-22 2.7E-27 159.1 13.2 165 7-193 2-197 (197)
43 PLN02811 hydrolase 99.9 7.6E-23 1.7E-27 163.0 11.1 185 12-220 1-207 (220)
44 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 1.1E-22 2.5E-27 156.4 11.1 160 7-193 1-175 (175)
45 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 6.2E-22 1.3E-26 149.1 12.7 151 7-194 1-154 (154)
46 PLN02954 phosphoserine phospha 99.9 5.9E-21 1.3E-25 152.6 16.1 202 3-223 10-223 (224)
47 PRK08942 D,D-heptose 1,7-bisph 99.9 4.5E-21 9.7E-26 148.2 11.9 126 88-224 27-177 (181)
48 KOG3085 Predicted hydrolase (H 99.9 1.3E-20 2.9E-25 147.7 14.4 181 3-204 5-216 (237)
49 KOG2914 Predicted haloacid-hal 99.9 1.3E-20 2.7E-25 147.3 14.1 194 3-218 8-217 (222)
50 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.9 2.8E-20 6.1E-25 146.2 15.9 114 87-204 77-193 (201)
51 PRK11133 serB phosphoserine ph 99.8 2.9E-20 6.3E-25 154.7 14.7 125 87-223 178-312 (322)
52 PRK06769 hypothetical protein; 99.8 5.5E-21 1.2E-25 146.3 9.4 121 89-223 27-171 (173)
53 PRK09552 mtnX 2-hydroxy-3-keto 99.8 1.9E-20 4.1E-25 149.1 12.7 190 5-227 3-216 (219)
54 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2E-20 4.4E-25 143.8 10.8 128 88-220 24-175 (176)
55 PRK13582 thrH phosphoserine ph 99.8 1.2E-19 2.6E-24 143.1 12.7 195 5-230 1-202 (205)
56 TIGR01656 Histidinol-ppas hist 99.8 3.8E-20 8.3E-25 138.1 8.7 100 90-203 27-147 (147)
57 TIGR01691 enolase-ppase 2,3-di 99.8 1.4E-18 3.1E-23 137.1 17.2 103 87-205 92-200 (220)
58 TIGR01685 MDP-1 magnesium-depe 99.8 1.2E-20 2.7E-25 143.0 4.6 104 87-204 42-160 (174)
59 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 7.5E-19 1.6E-23 128.8 11.6 95 90-202 25-132 (132)
60 TIGR01261 hisB_Nterm histidino 99.8 2.6E-19 5.6E-24 134.9 8.1 102 88-205 27-151 (161)
61 TIGR02137 HSK-PSP phosphoserin 99.8 5.5E-18 1.2E-22 132.6 13.7 192 6-225 2-197 (203)
62 TIGR01672 AphA HAD superfamily 99.8 7.1E-18 1.5E-22 134.2 13.2 97 87-204 111-214 (237)
63 COG0560 SerB Phosphoserine pho 99.8 1.6E-17 3.6E-22 130.6 12.9 186 2-206 2-192 (212)
64 TIGR01489 DKMTPPase-SF 2,3-dik 99.8 3.8E-17 8.1E-22 127.0 14.2 107 88-197 70-185 (188)
65 TIGR03333 salvage_mtnX 2-hydro 99.7 2.2E-17 4.7E-22 131.0 11.6 124 88-227 68-212 (214)
66 cd01427 HAD_like Haloacid deha 99.7 1.2E-17 2.5E-22 122.6 9.2 114 87-200 21-139 (139)
67 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 5.8E-18 1.3E-22 128.4 7.6 93 91-199 43-160 (166)
68 TIGR01488 HAD-SF-IB Haloacid D 99.7 1.8E-16 4E-21 121.9 13.1 105 87-193 70-177 (177)
69 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.7 4.4E-16 9.5E-21 122.5 13.9 129 70-202 66-199 (202)
70 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 1.1E-16 2.4E-21 130.2 9.8 122 91-223 121-254 (257)
71 TIGR01452 PGP_euk phosphoglyco 99.7 5.6E-17 1.2E-21 133.7 7.8 119 90-219 143-279 (279)
72 PRK05446 imidazole glycerol-ph 99.7 3.5E-16 7.6E-21 131.1 11.5 100 87-202 27-149 (354)
73 TIGR01670 YrbI-phosphatas 3-de 99.7 7.4E-17 1.6E-21 121.1 6.3 107 98-228 36-150 (154)
74 PRK11009 aphA acid phosphatase 99.6 1.8E-15 3.8E-20 120.4 11.7 108 73-204 98-214 (237)
75 TIGR01668 YqeG_hyp_ppase HAD s 99.6 2.7E-15 5.9E-20 114.5 12.2 97 87-206 40-141 (170)
76 COG0647 NagD Predicted sugar p 99.6 1.3E-15 2.8E-20 122.6 9.5 76 150-225 183-267 (269)
77 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 1.5E-15 3.3E-20 110.3 8.8 85 90-192 29-126 (128)
78 PLN02645 phosphoglycolate phos 99.6 1E-16 2.2E-21 134.0 2.8 116 98-224 178-308 (311)
79 PHA02530 pseT polynucleotide k 99.6 2.3E-15 4.9E-20 125.6 10.4 110 87-203 184-298 (300)
80 TIGR02726 phenyl_P_delta pheny 99.6 1.9E-16 4.2E-21 119.8 3.0 107 99-228 43-156 (169)
81 PF00702 Hydrolase: haloacid d 99.6 2.4E-15 5.3E-20 119.1 8.1 88 88-194 125-215 (215)
82 PF06888 Put_Phosphatase: Puta 99.6 7E-14 1.5E-18 110.6 16.1 175 7-202 2-198 (234)
83 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.6 6.3E-15 1.4E-19 119.4 9.7 66 154-219 175-249 (249)
84 smart00577 CPDc catalytic doma 99.6 8.1E-16 1.8E-20 114.8 2.5 94 87-198 42-139 (148)
85 PRK10444 UMP phosphatase; Prov 99.6 3.1E-14 6.6E-19 115.0 10.1 68 152-219 169-245 (248)
86 PRK09484 3-deoxy-D-manno-octul 99.5 1.1E-14 2.5E-19 112.4 6.4 102 98-223 56-168 (183)
87 KOG1615 Phosphoserine phosphat 99.5 2.8E-13 6.2E-18 101.2 12.7 103 86-192 84-191 (227)
88 PF13242 Hydrolase_like: HAD-h 99.5 1.4E-13 3.1E-18 90.4 7.7 65 155-219 2-75 (75)
89 PRK11590 hypothetical protein; 99.5 6.2E-13 1.4E-17 105.2 12.8 180 4-201 5-203 (211)
90 COG0241 HisB Histidinol phosph 99.5 7.2E-13 1.6E-17 100.2 11.5 121 89-220 30-173 (181)
91 PRK10530 pyridoxal phosphate ( 99.5 1.2E-13 2.6E-18 113.6 7.8 71 156-226 197-270 (272)
92 PRK01158 phosphoglycolate phos 99.5 1.2E-13 2.6E-18 110.8 7.1 72 155-226 154-228 (230)
93 TIGR01686 FkbH FkbH-like domai 99.5 2.7E-13 5.9E-18 113.8 9.1 88 90-196 31-125 (320)
94 PRK08238 hypothetical protein; 99.4 4.4E-12 9.6E-17 111.1 14.7 96 87-203 69-167 (479)
95 KOG2882 p-Nitrophenyl phosphat 99.4 2E-13 4.4E-18 109.1 5.0 74 150-223 217-303 (306)
96 TIGR01456 CECR5 HAD-superfamil 99.4 2.5E-12 5.4E-17 108.0 11.4 71 153-223 229-320 (321)
97 TIGR01544 HAD-SF-IE haloacid d 99.4 1.2E-11 2.5E-16 100.2 13.7 115 69-193 104-230 (277)
98 COG2179 Predicted hydrolase of 99.4 2.5E-12 5.4E-17 94.1 8.7 96 85-203 41-140 (175)
99 KOG3120 Predicted haloacid deh 99.4 2E-11 4.2E-16 93.3 12.7 208 4-231 12-251 (256)
100 TIGR01663 PNK-3'Pase polynucle 99.4 3.5E-12 7.6E-17 112.2 10.0 90 91-196 198-306 (526)
101 TIGR02244 HAD-IG-Ncltidse HAD 99.4 2.4E-11 5.1E-16 101.4 13.9 114 89-203 183-325 (343)
102 PRK10513 sugar phosphate phosp 99.3 8.1E-12 1.8E-16 102.6 9.4 77 151-227 189-268 (270)
103 COG4359 Uncharacterized conser 99.3 3.1E-11 6.7E-16 89.6 11.4 200 6-228 4-216 (220)
104 TIGR01482 SPP-subfamily Sucros 99.3 1.1E-12 2.3E-17 104.9 3.3 98 108-218 112-210 (225)
105 PRK00192 mannosyl-3-phosphogly 99.3 3.7E-11 8E-16 98.9 11.4 73 155-228 188-271 (273)
106 COG4229 Predicted enolase-phos 99.3 1.1E-10 2.5E-15 86.4 12.3 107 88-210 101-213 (229)
107 PF12689 Acid_PPase: Acid Phos 99.3 3.3E-12 7.2E-17 96.1 3.3 99 87-204 42-154 (169)
108 TIGR01545 YfhB_g-proteo haloac 99.2 1.8E-10 3.8E-15 90.9 12.7 107 89-202 93-203 (210)
109 PRK15126 thiamin pyrimidine py 99.2 1.8E-11 3.9E-16 100.7 6.9 77 151-227 181-262 (272)
110 KOG3040 Predicted sugar phosph 99.2 7.7E-12 1.7E-16 94.6 3.9 74 151-224 175-257 (262)
111 TIGR01487 SPP-like sucrose-pho 99.2 8.8E-12 1.9E-16 99.0 3.8 95 108-217 112-207 (215)
112 PRK10976 putative hydrolase; P 99.2 6.1E-11 1.3E-15 97.2 8.8 77 151-227 183-264 (266)
113 COG0561 Cof Predicted hydrolas 99.2 4.6E-11 9.9E-16 97.9 7.7 77 151-227 182-261 (264)
114 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 1.3E-11 2.7E-16 99.8 3.8 96 92-201 140-241 (242)
115 TIGR01460 HAD-SF-IIA Haloacid 99.2 4.5E-11 9.7E-16 96.1 6.5 51 153-203 184-236 (236)
116 TIGR01533 lipo_e_P4 5'-nucleot 99.2 3.3E-10 7.2E-15 91.7 11.3 83 87-190 115-204 (266)
117 COG1778 Low specificity phosph 99.2 1E-11 2.2E-16 89.9 2.2 92 99-213 44-139 (170)
118 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 1.1E-10 2.5E-15 94.3 8.0 87 90-195 24-116 (242)
119 PF12710 HAD: haloacid dehalog 99.2 7.9E-11 1.7E-15 91.6 6.7 92 93-191 92-192 (192)
120 PLN02887 hydrolase family prot 99.1 1.4E-09 3.1E-14 97.2 14.8 76 151-226 500-578 (580)
121 PRK03669 mannosyl-3-phosphogly 99.1 8.8E-10 1.9E-14 90.6 9.4 77 151-227 180-268 (271)
122 TIGR02463 MPGP_rel mannosyl-3- 99.0 7.4E-10 1.6E-14 88.3 6.3 44 156-199 177-220 (221)
123 PF09419 PGP_phosphatase: Mito 99.0 3.1E-09 6.6E-14 79.8 9.1 73 108-204 82-167 (168)
124 PF08645 PNK3P: Polynucleotide 99.0 1.1E-09 2.4E-14 82.4 5.9 91 92-198 31-153 (159)
125 TIGR00099 Cof-subfamily Cof su 99.0 1.5E-09 3.3E-14 88.4 6.8 68 151-218 181-249 (256)
126 PF08282 Hydrolase_3: haloacid 98.9 4.2E-09 9E-14 85.2 8.5 68 151-218 179-247 (254)
127 TIGR01684 viral_ppase viral ph 98.9 6.1E-09 1.3E-13 84.4 8.3 50 92-141 148-200 (301)
128 TIGR01525 ATPase-IB_hvy heavy 98.9 3.4E-09 7.4E-14 95.6 5.9 110 89-223 383-499 (556)
129 TIGR01486 HAD-SF-IIB-MPGP mann 98.8 7.4E-09 1.6E-13 84.4 6.9 72 154-225 172-254 (256)
130 PF06941 NT5C: 5' nucleotidase 98.8 1.1E-08 2.3E-13 79.7 7.3 169 6-223 2-185 (191)
131 TIGR01512 ATPase-IB2_Cd heavy 98.8 7.3E-09 1.6E-13 93.0 6.5 110 89-223 361-478 (536)
132 PTZ00445 p36-lilke protein; Pr 98.8 2.7E-08 5.8E-13 76.6 8.1 111 90-203 75-207 (219)
133 TIGR01485 SPP_plant-cyano sucr 98.7 1.1E-07 2.4E-12 77.2 10.8 51 153-203 162-212 (249)
134 PHA03398 viral phosphatase sup 98.7 7.2E-08 1.6E-12 78.3 9.2 95 92-187 150-266 (303)
135 TIGR01511 ATPase-IB1_Cu copper 98.7 7.3E-08 1.6E-12 87.0 8.8 109 89-223 404-518 (562)
136 COG4087 Soluble P-type ATPase 98.6 2.7E-07 5.9E-12 65.0 8.0 115 87-224 27-147 (152)
137 TIGR02251 HIF-SF_euk Dullard-l 98.6 1.6E-08 3.4E-13 76.5 2.1 97 88-201 40-139 (162)
138 TIGR01675 plant-AP plant acid 98.6 1.1E-06 2.4E-11 69.4 11.8 96 87-201 117-222 (229)
139 TIGR01522 ATPase-IIA2_Ca golgi 98.6 1.9E-07 4.2E-12 88.5 8.0 134 90-223 528-670 (884)
140 TIGR02461 osmo_MPG_phos mannos 98.6 1.5E-07 3.2E-12 75.2 6.0 43 156-198 179-223 (225)
141 COG4996 Predicted phosphatase 98.5 5.7E-07 1.2E-11 63.3 7.6 79 88-187 39-129 (164)
142 PRK12702 mannosyl-3-phosphogly 98.5 1.3E-06 2.9E-11 71.1 9.7 44 156-199 206-251 (302)
143 PRK10671 copA copper exporting 98.5 3.7E-07 8.1E-12 86.3 7.5 111 89-224 649-765 (834)
144 PRK14502 bifunctional mannosyl 98.5 4.7E-07 1E-11 81.5 7.7 47 156-202 611-659 (694)
145 PF05761 5_nucleotid: 5' nucle 98.4 1.1E-05 2.3E-10 70.4 15.0 115 88-203 181-326 (448)
146 PF03767 Acid_phosphat_B: HAD 98.4 4.5E-07 9.7E-12 72.4 5.3 91 89-193 114-211 (229)
147 PF05116 S6PP: Sucrose-6F-phos 98.4 7.2E-07 1.6E-11 72.2 5.8 49 154-203 161-209 (247)
148 PTZ00174 phosphomannomutase; P 98.4 1.4E-06 3E-11 70.6 7.5 47 151-201 181-231 (247)
149 PLN02177 glycerol-3-phosphate 98.4 4E-06 8.6E-11 74.1 10.8 100 91-199 111-213 (497)
150 PF13344 Hydrolase_6: Haloacid 98.3 2.8E-06 6E-11 58.9 7.2 81 90-195 14-100 (101)
151 TIGR01680 Veg_Stor_Prot vegeta 98.3 1.2E-05 2.5E-10 64.9 11.6 101 86-203 141-251 (275)
152 TIGR00685 T6PP trehalose-phosp 98.2 2.6E-06 5.6E-11 69.0 6.5 70 158-227 167-243 (244)
153 TIGR01116 ATPase-IIA1_Ca sarco 98.2 4.6E-06 9.9E-11 79.6 8.8 133 90-223 537-682 (917)
154 smart00775 LNS2 LNS2 domain. T 98.2 2.8E-05 6E-10 58.4 10.6 102 91-197 28-142 (157)
155 COG2503 Predicted secreted aci 98.2 1.4E-05 3.1E-10 62.5 8.9 95 70-189 106-208 (274)
156 KOG0207 Cation transport ATPas 98.1 3.7E-05 8.1E-10 70.7 10.7 107 89-222 722-836 (951)
157 TIGR02471 sucr_syn_bact_C sucr 98.1 9.1E-06 2E-10 65.4 6.0 50 152-201 153-202 (236)
158 PRK11033 zntA zinc/cadmium/mer 98.1 8.2E-06 1.8E-10 76.1 6.4 108 89-223 567-680 (741)
159 PF11019 DUF2608: Protein of u 98.0 0.00023 5E-09 57.7 13.5 113 89-207 80-215 (252)
160 PLN02423 phosphomannomutase 98.0 0.00024 5.2E-09 57.5 12.7 45 153-202 184-232 (245)
161 COG4030 Uncharacterized protei 98.0 0.00013 2.9E-09 56.7 10.2 151 71-227 69-265 (315)
162 TIGR01497 kdpB K+-transporting 97.9 2.8E-05 6.2E-10 71.1 7.0 87 90-201 446-535 (675)
163 KOG2630 Enolase-phosphatase E- 97.8 0.00019 4.1E-09 55.9 9.5 101 90-206 123-229 (254)
164 PF05152 DUF705: Protein of un 97.8 0.00031 6.8E-09 56.6 10.9 97 90-187 142-260 (297)
165 COG2217 ZntA Cation transport 97.8 6.7E-05 1.5E-09 69.0 7.7 110 89-223 536-651 (713)
166 PRK14010 potassium-transportin 97.8 6.3E-05 1.4E-09 68.9 6.9 86 90-200 441-529 (673)
167 COG3882 FkbH Predicted enzyme 97.8 0.00012 2.5E-09 63.0 7.9 94 87-195 252-348 (574)
168 PRK01122 potassium-transportin 97.7 9.1E-05 2E-09 68.0 6.9 107 90-222 445-558 (679)
169 TIGR01484 HAD-SF-IIB HAD-super 97.7 3E-05 6.5E-10 60.9 3.2 48 151-198 156-203 (204)
170 TIGR02250 FCP1_euk FCP1-like p 97.7 9E-05 1.9E-09 55.6 5.5 80 87-185 55-138 (156)
171 COG3700 AphA Acid phosphatase 97.7 0.00034 7.5E-09 52.3 8.1 91 90-201 114-211 (237)
172 TIGR01517 ATPase-IIB_Ca plasma 97.7 0.00012 2.6E-09 70.3 7.2 134 90-223 579-721 (941)
173 TIGR01524 ATPase-IIIB_Mg magne 97.7 0.00017 3.7E-09 68.6 8.1 130 90-221 515-652 (867)
174 PRK10187 trehalose-6-phosphate 97.6 0.00021 4.5E-09 58.6 7.1 75 155-231 171-248 (266)
175 PF03031 NIF: NLI interacting 97.6 0.0001 2.3E-09 55.4 4.9 90 88-194 34-126 (159)
176 TIGR01523 ATPase-IID_K-Na pota 97.6 0.00018 3.8E-09 69.7 7.5 133 90-222 646-797 (1053)
177 PLN02645 phosphoglycolate phos 97.6 0.00035 7.5E-09 58.7 8.3 87 90-199 44-136 (311)
178 TIGR01689 EcbF-BcbF capsule bi 97.6 0.00042 9.2E-09 49.8 7.3 46 90-137 24-87 (126)
179 PRK15122 magnesium-transportin 97.5 0.00021 4.6E-09 68.2 7.1 131 90-223 550-689 (903)
180 PRK10517 magnesium-transportin 97.5 0.00035 7.7E-09 66.6 8.2 130 90-222 550-688 (902)
181 TIGR01106 ATPase-IIC_X-K sodiu 97.3 0.00076 1.6E-08 65.2 8.2 133 90-222 568-735 (997)
182 TIGR01647 ATPase-IIIA_H plasma 97.3 0.00044 9.5E-09 64.9 5.9 120 90-213 442-574 (755)
183 COG5663 Uncharacterized conser 97.3 0.00025 5.5E-09 52.4 3.1 115 87-227 69-190 (194)
184 COG5610 Predicted hydrolase (H 97.0 0.0014 3.1E-08 56.1 5.8 114 73-200 80-201 (635)
185 COG0474 MgtA Cation transport 97.0 0.0013 2.8E-08 63.1 6.1 116 89-204 546-668 (917)
186 PLN02382 probable sucrose-phos 96.9 0.00091 2E-08 58.3 3.6 49 153-201 170-222 (413)
187 TIGR01494 ATPase_P-type ATPase 96.9 0.006 1.3E-07 54.7 8.9 100 89-221 346-448 (499)
188 KOG3107 Predicted haloacid deh 96.8 0.0092 2E-07 50.1 8.4 76 108-202 375-452 (468)
189 PF08235 LNS2: LNS2 (Lipin/Ned 96.8 0.012 2.6E-07 43.8 8.3 98 90-196 27-141 (157)
190 TIGR01658 EYA-cons_domain eyes 96.7 0.0074 1.6E-07 47.8 6.9 77 108-202 180-258 (274)
191 PRK14501 putative bifunctional 96.7 0.0032 6.8E-08 59.1 5.7 68 156-227 655-724 (726)
192 TIGR01657 P-ATPase-V P-type AT 96.6 0.014 3E-07 57.1 9.9 133 90-223 656-851 (1054)
193 KOG0202 Ca2+ transporting ATPa 96.5 0.0068 1.5E-07 55.9 6.5 124 90-213 584-718 (972)
194 TIGR01652 ATPase-Plipid phosph 96.5 0.0034 7.4E-08 61.3 4.8 134 90-223 631-819 (1057)
195 PLN02580 trehalose-phosphatase 96.5 0.0089 1.9E-07 51.2 6.6 71 156-227 299-377 (384)
196 COG3769 Predicted hydrolase (H 96.2 0.15 3.2E-06 40.0 11.3 38 161-198 194-233 (274)
197 COG4502 5'(3')-deoxyribonucleo 96.0 0.032 7E-07 40.3 6.5 165 4-223 2-174 (180)
198 TIGR01452 PGP_euk phosphoglyco 96.0 0.037 8E-07 45.7 7.9 85 90-198 18-108 (279)
199 TIGR02245 HAD_IIID1 HAD-superf 96.0 0.034 7.4E-07 43.2 7.1 101 90-196 45-151 (195)
200 KOG2961 Predicted hydrolase (H 96.0 0.064 1.4E-06 39.4 7.8 35 172-206 137-172 (190)
201 COG2216 KdpB High-affinity K+ 96.0 0.021 4.5E-07 50.1 6.2 86 90-200 447-535 (681)
202 PLN02205 alpha,alpha-trehalose 95.7 0.019 4.1E-07 54.6 5.5 72 155-228 759-846 (854)
203 KOG2470 Similar to IMP-GMP spe 95.5 0.028 6.1E-07 46.9 5.1 112 89-201 239-375 (510)
204 PF05822 UMPH-1: Pyrimidine 5' 95.5 0.39 8.5E-06 38.6 11.4 116 70-193 74-198 (246)
205 PLN03190 aminophospholipid tra 95.4 0.041 8.9E-07 54.2 6.9 49 175-223 872-922 (1178)
206 PRK10187 trehalose-6-phosphate 95.2 0.063 1.4E-06 44.0 6.2 14 6-19 15-28 (266)
207 COG1877 OtsB Trehalose-6-phosp 93.7 0.18 3.9E-06 41.2 5.7 68 157-226 181-251 (266)
208 PLN02151 trehalose-phosphatase 93.7 0.18 3.9E-06 42.9 5.9 69 158-227 269-345 (354)
209 PLN03017 trehalose-phosphatase 93.7 0.28 6E-06 42.0 7.0 70 158-227 283-359 (366)
210 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.6 0.46 1E-05 38.5 7.9 112 89-203 16-145 (249)
211 KOG2134 Polynucleotide kinase 93.4 0.2 4.4E-06 42.5 5.5 44 155-198 168-230 (422)
212 PLN02499 glycerol-3-phosphate 93.2 4 8.8E-05 36.4 13.4 77 107-194 112-192 (498)
213 TIGR01484 HAD-SF-IIB HAD-super 92.7 0.091 2E-06 41.0 2.6 27 7-33 1-28 (204)
214 PRK14501 putative bifunctional 91.7 0.44 9.5E-06 45.0 6.1 36 90-125 514-553 (726)
215 PLN02580 trehalose-phosphatase 91.7 0.5 1.1E-05 40.8 5.9 36 89-124 140-177 (384)
216 KOG0204 Calcium transporting A 91.1 0.89 1.9E-05 42.8 7.1 121 90-214 647-780 (1034)
217 PRK10444 UMP phosphatase; Prov 90.6 1.1 2.3E-05 36.4 6.7 111 90-203 17-144 (248)
218 PLN02151 trehalose-phosphatase 90.5 0.68 1.5E-05 39.5 5.6 33 90-122 120-154 (354)
219 TIGR01460 HAD-SF-IIA Haloacid 90.1 2.1 4.6E-05 34.3 8.0 52 87-138 11-69 (236)
220 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.6 0.44 9.5E-06 38.8 3.0 49 90-138 21-75 (257)
221 PLN02205 alpha,alpha-trehalose 88.5 1.2 2.7E-05 42.7 6.3 32 92-123 618-653 (854)
222 TIGR02471 sucr_syn_bact_C sucr 88.3 0.34 7.3E-06 38.8 2.2 18 7-24 1-18 (236)
223 TIGR02468 sucrsPsyn_pln sucros 87.7 1.9 4.1E-05 42.1 6.9 76 114-200 923-1000(1050)
224 KOG0210 P-type ATPase [Inorgan 87.3 1.3 2.8E-05 40.8 5.3 113 90-223 711-832 (1051)
225 TIGR00685 T6PP trehalose-phosp 86.4 0.45 9.8E-06 38.4 1.9 16 4-19 2-17 (244)
226 PF06189 5-nucleotidase: 5'-nu 86.2 6.6 0.00014 31.9 8.2 86 91-205 165-262 (264)
227 KOG3040 Predicted sugar phosph 85.4 4.2 9E-05 31.9 6.5 46 90-135 23-74 (262)
228 KOG4549 Magnesium-dependent ph 84.4 4.7 0.0001 28.8 5.8 81 87-186 41-134 (144)
229 PLN03063 alpha,alpha-trehalose 81.7 3.1 6.7E-05 39.8 5.5 72 158-229 678-786 (797)
230 TIGR01456 CECR5 HAD-superfamil 81.7 5.1 0.00011 33.8 6.3 87 86-199 12-109 (321)
231 PLN03017 trehalose-phosphatase 81.7 1.6 3.5E-05 37.4 3.3 13 5-17 111-123 (366)
232 KOG3128 Uncharacterized conser 81.3 2.9 6.4E-05 33.7 4.3 103 87-193 135-247 (298)
233 PLN03064 alpha,alpha-trehalose 80.8 4.1 8.9E-05 39.5 6.0 37 89-125 621-661 (934)
234 PF06014 DUF910: Bacterial pro 80.3 0.7 1.5E-05 28.5 0.5 25 163-191 7-31 (62)
235 PRK00192 mannosyl-3-phosphogly 78.6 4.2 9E-05 33.3 4.8 41 90-130 21-64 (273)
236 PF02358 Trehalose_PPase: Treh 78.0 1.7 3.8E-05 34.7 2.3 61 156-216 163-234 (235)
237 PF06437 ISN1: IMP-specific 5' 77.0 4.7 0.0001 34.5 4.6 45 158-204 349-402 (408)
238 COG2179 Predicted hydrolase of 77.0 1.7 3.6E-05 32.7 1.7 17 4-20 27-43 (175)
239 COG5083 SMP2 Uncharacterized p 75.6 1.6 3.5E-05 37.9 1.5 64 170-233 489-559 (580)
240 PRK10513 sugar phosphate phosp 75.0 8.6 0.00019 31.3 5.7 39 90-128 20-61 (270)
241 KOG2469 IMP-GMP specific 5'-nu 73.5 14 0.0003 32.0 6.5 113 92-204 200-336 (424)
242 TIGR02461 osmo_MPG_phos mannos 72.0 6.7 0.00015 31.2 4.2 37 92-128 17-56 (225)
243 TIGR01487 SPP-like sucrose-pho 71.6 7.5 0.00016 30.5 4.4 40 89-128 17-59 (215)
244 TIGR02463 MPGP_rel mannosyl-3- 70.6 9.3 0.0002 30.0 4.8 37 91-127 17-56 (221)
245 COG4850 Uncharacterized conser 70.5 21 0.00047 30.0 6.7 81 88-188 194-292 (373)
246 TIGR02251 HIF-SF_euk Dullard-l 70.5 3 6.5E-05 31.4 1.8 16 6-21 2-17 (162)
247 PF02358 Trehalose_PPase: Treh 70.0 5.9 0.00013 31.7 3.5 13 9-21 1-13 (235)
248 PLN02382 probable sucrose-phos 68.6 3 6.5E-05 36.6 1.6 14 6-19 10-23 (413)
249 TIGR00099 Cof-subfamily Cof su 68.1 11 0.00025 30.3 4.9 39 89-127 15-56 (256)
250 PRK01158 phosphoglycolate phos 67.9 11 0.00023 29.8 4.6 39 90-128 20-61 (230)
251 PRK15126 thiamin pyrimidine py 67.4 11 0.00024 30.8 4.7 40 90-129 19-61 (272)
252 TIGR02250 FCP1_euk FCP1-like p 66.8 4.5 9.7E-05 30.2 2.1 18 4-21 5-22 (156)
253 COG0561 Cof Predicted hydrolas 66.5 11 0.00024 30.6 4.5 41 88-128 18-61 (264)
254 PRK10976 putative hydrolase; P 63.9 14 0.0003 30.0 4.6 39 90-128 19-60 (266)
255 cd04728 ThiG Thiazole synthase 63.7 62 0.0013 26.2 7.9 105 88-214 102-218 (248)
256 TIGR01486 HAD-SF-IIB-MPGP mann 63.6 12 0.00025 30.3 4.1 34 94-127 20-56 (256)
257 KOG0323 TFIIF-interacting CTD 63.5 18 0.0004 33.4 5.6 51 88-138 199-253 (635)
258 KOG3189 Phosphomannomutase [Li 62.6 8 0.00017 30.1 2.7 23 7-29 13-35 (252)
259 TIGR01482 SPP-subfamily Sucros 62.2 15 0.00032 28.8 4.5 39 90-128 15-56 (225)
260 PRK10530 pyridoxal phosphate ( 61.6 14 0.0003 30.0 4.3 39 90-128 20-61 (272)
261 KOG2469 IMP-GMP specific 5'-nu 60.9 11 0.00023 32.7 3.4 41 3-43 25-65 (424)
262 PTZ00445 p36-lilke protein; Pr 60.9 3.7 8.1E-05 32.3 0.7 15 4-18 42-56 (219)
263 TIGR00715 precor6x_red precorr 60.4 10 0.00022 30.9 3.2 61 163-227 189-255 (256)
264 PRK13789 phosphoribosylamine-- 60.2 53 0.0012 29.0 7.8 114 94-227 56-176 (426)
265 KOG2882 p-Nitrophenyl phosphat 60.1 10 0.00023 31.4 3.1 41 87-127 35-81 (306)
266 KOG1618 Predicted phosphatase 60.1 11 0.00025 31.5 3.3 53 151-203 265-342 (389)
267 PRK13790 phosphoribosylamine-- 59.5 58 0.0012 28.2 7.9 69 159-227 67-135 (379)
268 PRK00208 thiG thiazole synthas 58.8 87 0.0019 25.4 8.0 106 89-216 103-220 (250)
269 PRK12702 mannosyl-3-phosphogly 57.6 22 0.00048 29.6 4.7 40 90-129 18-60 (302)
270 KOG0203 Na+/K+ ATPase, alpha s 56.1 21 0.00046 34.1 4.7 36 90-125 590-628 (1019)
271 PF02571 CbiJ: Precorrin-6x re 55.6 12 0.00026 30.4 2.8 60 161-224 184-248 (249)
272 TIGR00236 wecB UDP-N-acetylglu 55.2 60 0.0013 27.6 7.3 95 95-203 16-119 (365)
273 PRK08057 cobalt-precorrin-6x r 54.6 16 0.00035 29.6 3.4 63 161-227 180-247 (248)
274 COG0731 Fe-S oxidoreductases [ 53.5 44 0.00096 27.9 5.8 36 87-122 89-128 (296)
275 COG4483 Uncharacterized protei 53.3 11 0.00023 23.5 1.6 26 163-192 7-32 (68)
276 PF14336 DUF4392: Domain of un 51.1 95 0.0021 25.9 7.5 95 93-191 63-192 (291)
277 PRK08354 putative aminotransfe 50.1 87 0.0019 26.0 7.3 85 93-204 43-127 (311)
278 PLN03063 alpha,alpha-trehalose 49.9 65 0.0014 31.1 7.1 36 90-125 532-571 (797)
279 PRK03669 mannosyl-3-phosphogly 49.0 35 0.00075 27.9 4.6 38 90-127 24-64 (271)
280 PRK00885 phosphoribosylamine-- 48.6 97 0.0021 27.1 7.7 68 159-227 102-170 (420)
281 cd01766 Ufm1 Urm1-like ubiquit 47.2 39 0.00084 21.6 3.5 40 156-195 25-64 (82)
282 PF13535 ATP-grasp_4: ATP-gras 47.2 71 0.0015 23.8 5.9 69 159-228 4-73 (184)
283 PF04413 Glycos_transf_N: 3-De 45.5 1.1E+02 0.0024 23.5 6.7 87 94-204 36-128 (186)
284 TIGR00877 purD phosphoribosyla 45.5 1.1E+02 0.0024 26.7 7.5 69 158-227 103-173 (423)
285 KOG0206 P-type ATPase [General 45.1 24 0.00053 35.1 3.5 43 174-216 794-838 (1151)
286 PLN02257 phosphoribosylamine-- 43.6 1.4E+02 0.0031 26.4 7.8 68 159-227 102-170 (434)
287 PRK00994 F420-dependent methyl 43.5 1.8E+02 0.0038 23.6 8.6 43 156-201 72-116 (277)
288 TIGR01485 SPP_plant-cyano sucr 43.2 55 0.0012 26.2 4.9 35 93-127 24-61 (249)
289 PRK07206 hypothetical protein; 42.1 2.2E+02 0.0049 24.7 8.9 70 158-228 107-180 (416)
290 TIGR00190 thiC thiamine biosyn 41.8 36 0.00079 29.6 3.7 85 69-184 135-225 (423)
291 KOG0209 P-type ATPase [Inorgan 41.7 21 0.00045 34.2 2.4 30 175-204 807-836 (1160)
292 PF01071 GARS_A: Phosphoribosy 40.0 91 0.002 24.3 5.4 69 161-229 4-73 (194)
293 cd06537 CIDE_N_B CIDE_N domain 40.0 20 0.00043 23.5 1.5 16 6-21 40-55 (81)
294 PRK09932 glycerate kinase II; 39.8 1.4E+02 0.003 26.1 6.9 75 113-200 265-343 (381)
295 cd06539 CIDE_N_A CIDE_N domain 39.2 21 0.00046 23.2 1.5 16 6-21 41-56 (78)
296 PRK02261 methylaspartate mutas 38.8 1.5E+02 0.0033 21.5 7.0 66 67-136 37-119 (137)
297 KOG2456 Aldehyde dehydrogenase 38.7 1.4E+02 0.0031 26.1 6.7 102 90-215 141-253 (477)
298 smart00266 CAD Domains present 37.8 22 0.00047 22.9 1.4 16 6-21 39-54 (74)
299 PRK13352 thiamine biosynthesis 37.8 47 0.001 29.0 3.7 84 70-184 139-228 (431)
300 PRK06524 biotin carboxylase-li 37.6 1.8E+02 0.0038 26.4 7.4 120 90-227 91-214 (493)
301 KOG1605 TFIIF-interacting CTD 37.3 23 0.0005 29.0 1.8 92 89-197 130-224 (262)
302 PRK13717 conjugal transfer pro 36.2 1.6E+02 0.0035 21.1 5.8 14 3-16 43-56 (128)
303 PRK11840 bifunctional sulfur c 35.5 2.8E+02 0.0061 23.6 9.2 97 88-205 176-282 (326)
304 KOG1618 Predicted phosphatase 35.3 99 0.0021 26.2 5.1 87 86-199 47-144 (389)
305 PRK06425 histidinol-phosphate 34.9 1.6E+02 0.0034 24.8 6.6 75 107-206 60-134 (332)
306 COG0052 RpsB Ribosomal protein 34.5 1.5E+02 0.0031 24.2 5.8 49 175-223 157-209 (252)
307 PF02350 Epimerase_2: UDP-N-ac 33.9 81 0.0018 26.9 4.7 88 101-203 2-100 (346)
308 PF02593 dTMP_synthase: Thymid 33.5 67 0.0015 25.5 3.8 92 89-198 58-158 (217)
309 KOG2116 Protein involved in pl 33.5 21 0.00047 32.9 1.1 55 177-231 653-712 (738)
310 cd06536 CIDE_N_ICAD CIDE_N dom 31.7 27 0.00059 22.8 1.1 16 6-21 43-58 (80)
311 cd01615 CIDE_N CIDE_N domain, 31.7 31 0.00067 22.4 1.4 15 7-21 42-56 (78)
312 COG0078 ArgF Ornithine carbamo 31.5 85 0.0019 26.3 4.2 38 163-201 141-184 (310)
313 PF10113 Fibrillarin_2: Fibril 30.8 96 0.0021 27.3 4.5 42 159-200 207-252 (505)
314 PF03671 Ufm1: Ubiquitin fold 30.1 27 0.00057 22.2 0.8 33 156-188 25-57 (76)
315 PLN02444 HMP-P synthase 30.0 81 0.0018 28.8 4.0 84 70-184 296-383 (642)
316 COG0191 Fba Fructose/tagatose 29.9 1.2E+02 0.0025 25.3 4.7 97 94-202 5-106 (286)
317 PRK12415 fructose 1,6-bisphosp 29.8 1.4E+02 0.0031 25.2 5.2 54 151-204 131-188 (322)
318 PF01993 MTD: methylene-5,6,7, 29.3 1.7E+02 0.0036 23.8 5.3 43 156-201 71-115 (276)
319 cd06538 CIDE_N_FSP27 CIDE_N do 29.3 35 0.00077 22.2 1.3 15 7-21 41-55 (79)
320 PRK01372 ddl D-alanine--D-alan 28.8 3E+02 0.0064 22.7 7.2 68 159-226 98-165 (304)
321 PF04007 DUF354: Protein of un 28.4 90 0.002 26.6 4.0 33 95-127 16-50 (335)
322 PF02017 CIDE-N: CIDE-N domain 28.1 37 0.0008 22.1 1.3 15 7-21 42-56 (78)
323 COG0422 ThiC Thiamine biosynth 27.9 1.1E+02 0.0024 26.5 4.4 59 69-127 136-200 (432)
324 PF09269 DUF1967: Domain of un 27.9 66 0.0014 20.2 2.4 23 162-184 44-66 (69)
325 PF10307 DUF2410: Hypothetical 27.6 3E+02 0.0065 21.5 8.2 73 108-193 76-152 (197)
326 PRK01688 histidinol-phosphate 27.6 3.8E+02 0.0082 22.7 8.6 76 107-203 77-154 (351)
327 PRK05294 carB carbamoyl phosph 27.1 3E+02 0.0065 27.7 7.9 69 159-227 669-737 (1066)
328 cd07043 STAS_anti-anti-sigma_f 27.1 93 0.002 20.3 3.3 36 95-130 59-95 (99)
329 COG2897 SseA Rhodanese-related 26.8 1.6E+02 0.0034 24.6 5.0 48 155-202 70-123 (285)
330 TIGR03151 enACPred_II putative 26.7 3.9E+02 0.0083 22.4 7.6 88 97-203 100-192 (307)
331 KOG0208 Cation transport ATPas 26.3 1.5E+02 0.0031 29.4 5.2 39 156-196 706-745 (1140)
332 PLN02887 hydrolase family prot 26.3 1.2E+02 0.0026 28.1 4.6 38 90-127 325-365 (580)
333 PRK02186 argininosuccinate lya 26.2 4.9E+02 0.011 25.6 9.0 69 158-227 106-175 (887)
334 TIGR03572 WbuZ glycosyl amidat 26.1 3.3E+02 0.0071 21.5 6.9 43 157-202 183-228 (232)
335 TIGR00262 trpA tryptophan synt 25.7 3.7E+02 0.008 21.9 8.4 99 90-204 124-230 (256)
336 PRK13762 tRNA-modifying enzyme 25.2 86 0.0019 26.5 3.3 28 88-115 140-170 (322)
337 PRK10342 glycerate kinase I; P 25.2 3.8E+02 0.0082 23.4 7.2 76 113-200 265-343 (381)
338 TIGR03595 Obg_CgtA_exten Obg f 25.2 1E+02 0.0022 19.4 2.9 23 162-184 44-66 (69)
339 PF02222 ATP-grasp: ATP-grasp 25.1 1.8E+02 0.004 22.0 4.8 59 167-226 1-61 (172)
340 PTZ00174 phosphomannomutase; P 24.8 1.3E+02 0.0028 24.1 4.2 34 90-123 22-58 (247)
341 PRK14502 bifunctional mannosyl 24.8 1.4E+02 0.003 28.3 4.8 38 91-128 434-474 (694)
342 PF15366 DUF4597: Domain of un 24.8 52 0.0011 19.7 1.3 23 233-255 10-34 (62)
343 COG1817 Uncharacterized protei 24.8 2.8E+02 0.006 23.6 6.0 35 93-127 14-50 (346)
344 CHL00162 thiG thiamin biosynth 24.5 4E+02 0.0086 21.9 7.7 97 89-205 117-222 (267)
345 PF13580 SIS_2: SIS domain; PD 24.3 1.1E+02 0.0023 22.1 3.3 42 160-201 89-137 (138)
346 cd01445 TST_Repeats Thiosulfat 24.0 1.9E+02 0.0042 20.8 4.7 46 156-201 76-129 (138)
347 PRK09284 thiamine biosynthesis 23.9 98 0.0021 28.2 3.5 84 70-184 291-378 (607)
348 PF04413 Glycos_transf_N: 3-De 23.7 1.6E+02 0.0034 22.7 4.3 69 97-188 109-185 (186)
349 PF08620 RPAP1_C: RPAP1-like, 23.6 30 0.00066 22.2 0.3 9 9-17 4-12 (73)
350 COG3453 Uncharacterized protei 23.6 2.8E+02 0.0061 19.9 5.5 39 155-193 42-82 (130)
351 PLN02588 glycerol-3-phosphate 23.1 46 0.00099 30.1 1.3 35 91-126 134-169 (525)
352 PF05690 ThiG: Thiazole biosyn 22.9 4.2E+02 0.009 21.5 9.1 97 88-204 102-207 (247)
353 PF06437 ISN1: IMP-specific 5' 22.8 54 0.0012 28.4 1.7 17 4-20 146-162 (408)
354 TIGR00045 glycerate kinase. Th 22.6 3.7E+02 0.0079 23.5 6.6 75 113-200 264-342 (375)
355 PF12990 DUF3874: Domain of un 22.5 1.3E+02 0.0029 19.2 3.1 33 95-127 28-61 (73)
356 PLN02591 tryptophan synthase 22.2 4.3E+02 0.0094 21.5 8.3 30 175-204 189-221 (250)
357 TIGR00514 accC acetyl-CoA carb 21.9 3.4E+02 0.0073 24.1 6.6 68 159-226 115-184 (449)
358 PF06901 FrpC: RTX iron-regula 21.7 60 0.0013 25.1 1.5 14 6-19 59-72 (271)
359 PF03332 PMM: Eukaryotic phosp 21.1 1.5E+02 0.0032 23.6 3.7 42 96-137 2-45 (220)
360 TIGR03140 AhpF alkyl hydropero 21.0 4.3E+02 0.0093 23.9 7.2 30 172-201 210-242 (515)
361 PRK13125 trpA tryptophan synth 20.7 4.5E+02 0.0097 21.1 7.2 29 176-204 186-217 (244)
362 TIGR00640 acid_CoA_mut_C methy 20.5 1.5E+02 0.0034 21.3 3.5 40 91-130 66-110 (132)
363 PF04977 DivIC: Septum formati 20.2 1.8E+02 0.0038 18.3 3.5 24 157-180 51-76 (80)
364 TIGR02886 spore_II_AA anti-sig 20.2 1.3E+02 0.0028 20.2 3.0 35 97-131 62-97 (106)
365 PRK06111 acetyl-CoA carboxylas 20.2 2.8E+02 0.006 24.5 5.8 68 158-226 114-184 (450)
366 PRK10422 lipopolysaccharide co 20.1 5.4E+02 0.012 21.8 8.0 23 178-200 265-287 (352)
367 COG3562 KpsS Capsule polysacch 20.0 2.1E+02 0.0044 24.6 4.4 46 157-203 285-330 (403)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.97 E-value=4e-30 Score=194.10 Aligned_cols=221 Identities=51% Similarity=0.900 Sum_probs=206.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
.++++++||+|.||+.....+..+.++.+.+|+.+++|++...+..+...+++.||.....+...+...+.++++++++.
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~ 92 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG 92 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhhhcC-cEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 83 RLPYDLIKPDPQLRNLLCSITQR-KIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 83 ~~~~~~~~~~pg~~~~l~~l~~~-~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
.+.++.++|.+-.+.+|-.|+++ .++.||+...++.++|+++|+.+.|+.|++.+...+ .+-...+||.+.
T Consensus 93 ~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np--------~~~~~vcKP~~~ 164 (244)
T KOG3109|consen 93 RLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP--------IEKTVVCKPSEE 164 (244)
T ss_pred cCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC--------CCCceeecCCHH
Confidence 99999999999999999999999 569999999999999999999999999999877654 256778999999
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHhcCC
Q 025190 162 AMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 162 ~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 231 (256)
+|+.+.+..|++ |.++++++||.++|..|++.|+++++++.......+++++.+..+..+.++.+|....
T Consensus 165 afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 165 AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 999999999997 9999999999999999999999999999988888899999999999888999887765
No 2
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.97 E-value=2.2e-30 Score=205.73 Aligned_cols=197 Identities=21% Similarity=0.315 Sum_probs=148.1
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHcCCCCChhhHhhhhhc
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (256)
++|+|+||+||||+|+...+..++..+ .++++......+. +...+|..... +..+. ....+.+...+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~-----~~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~ 71 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHT-----LKTYYPNQYKRED----VLPFIGPSLHDTFSKID-ESKVEEMITTYRE 71 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHH-----HHHhCCCCCCHHH----HHHHhCcCHHHHHHhcC-HHHHHHHHHHHHH
Confidence 579999999999999998888888874 4444432111111 22233433222 22221 1112222222211
Q ss_pred ---CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 83 ---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 83 ---~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
........++||+.++|+.|+++|+ ++||+....++..++.+|+.++|+.++++++... +
T Consensus 72 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------~ 137 (214)
T PRK13288 72 FNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------A 137 (214)
T ss_pred HHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC--------------C
Confidence 1112456899999999999999886 8999999999999999999999999999888775 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhHH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVVP 224 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l~ 224 (256)
||+|..+.+++++++++++++++|||+.+|+++|+++|+.++++.++.. ...++++++++.++.+++.
T Consensus 138 Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 138 KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVG 211 (214)
T ss_pred CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999976532 3468999999999888764
No 3
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.97 E-value=7.2e-29 Score=192.46 Aligned_cols=184 Identities=53% Similarity=0.895 Sum_probs=148.8
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCCC
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP 85 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (256)
++|+||+||||+|+...+..++.+++.++....+|++..........++..+|.....+... .....+.+...+.+...
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999999999999999887777777889887666555555555556544433222 23455667777665444
Q ss_pred CCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
.....++||+.++|+.|+.+-+++||+....++..++.+|+.++|+.++++++.+.. ....||+|++|.+
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------~~~~KP~p~~~~~ 149 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD----------YLLPKPSPQAYEK 149 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc----------cCCCCCCHHHHHH
Confidence 456789999999999999554599999999999999999999999999999887630 0114999999999
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
+++++|++|+++++|||+..|+.+|+++|+++++|
T Consensus 150 ~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 150 ALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999999999875
No 4
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.97 E-value=2.1e-29 Score=206.39 Aligned_cols=206 Identities=17% Similarity=0.139 Sum_probs=150.3
Q ss_pred CCCCeEEEEecCCCccCCCcc-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH---------------HHHH
Q 025190 2 DSPFNCLVFDLDDTLYPSETG-IAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL---------------AGLR 65 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 65 (256)
|+++|+|+||+||||+|+... +..++.+ +.+.+|.+..... . ...+|... ....
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~~~-~----~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITLEE-A----RGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCHHH-H----HHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 356899999999999998643 3567776 4455666432211 1 11111110 0112
Q ss_pred HcCCCCChhhH---hhhh----hcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeE
Q 025190 66 ALGYDIGADDY---HGFV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQII 134 (256)
Q Consensus 66 ~~~~~~~~~~~---~~~~----~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~ 134 (256)
.++.....+.+ ...+ .+.+ .....++||+.++|+.|+++|+ |+||+....+...++.+++..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 23332222222 1111 1111 2456899999999999999986 99999999999999999988875 8899
Q ss_pred ecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--------
Q 025190 135 CFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-------- 205 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-------- 205 (256)
++++... .||+|+.|..+++++|+. +++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 150 ~~~~~~~--------------~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~ 215 (267)
T PRK13478 150 TTDDVPA--------------GRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEE 215 (267)
T ss_pred cCCcCCC--------------CCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHH
Confidence 9888775 799999999999999996 69999999999999999999999999986642
Q ss_pred ---------------------CCCCCeeeCCcCchHHhHHHHHhcCCC
Q 025190 206 ---------------------VGEADYALENVNNLPQVVPEIWVSQSD 232 (256)
Q Consensus 206 ---------------------~~~~~~~~~~~~el~~~l~~~~~~~~~ 232 (256)
...++++++++.+|.+++..+......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~~~ 263 (267)
T PRK13478 216 YQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEARLAR 263 (267)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHHhc
Confidence 356999999999999988776554433
No 5
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.97 E-value=1.4e-29 Score=205.02 Aligned_cols=193 Identities=22% Similarity=0.277 Sum_probs=144.0
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHHhhhhHH-HHHHcCC-CCC--h-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF----SETKASSLRVELFKAYGSTLA-GLRALGY-DIG--A- 73 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~- 73 (256)
.++|+|+||+||||+|+...+..++.++ .+++|. +.... ... ....|.... .+..+.. ... .
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~-----~~~~g~~~g~~~~~~-~~~---~~~~G~~~~~~~~~~~~~~~~~~~~ 90 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFREM-----LQEINFNGGVPITEE-FFV---ENIAGKHNEDIALGLFPDDLERGLK 90 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHHH-----HHHhccccCCCCCHH-HHH---HHcCCCCHHHHHHHHcCcchhhHHH
Confidence 4679999999999999999888888874 444432 22111 100 011222111 1111111 000 0
Q ss_pred --hhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCC
Q 025190 74 --DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR 148 (256)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 148 (256)
..+...+.+.. .....++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.+++++++..
T Consensus 91 ~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~------- 162 (248)
T PLN02770 91 FTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH------- 162 (248)
T ss_pred HHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC-------
Confidence 11122222211 2457899999999999999986 9999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----CCCCCCeeeCCcCch
Q 025190 149 PDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----NVGEADYALENVNNL 219 (256)
Q Consensus 149 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----~~~~~~~~~~~~~el 219 (256)
.||+|+.|..++++++++|++|++|||+.+|+++|+++|+.++++.++. ....++++++++.++
T Consensus 163 -------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 163 -------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred -------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 7999999999999999999999999999999999999999999997653 235799999999984
No 6
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=1.7e-29 Score=202.33 Aligned_cols=196 Identities=18% Similarity=0.167 Sum_probs=147.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHH-HHcCCCCCh-------hh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RALGYDIGA-------DD 75 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~ 75 (256)
|+|+|+||+||||+|+...+..++.. +.+++|.+....+.... ..|...... ......... +.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLRP----VVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 56999999999999999888888887 55677765332222211 122222111 111111121 12
Q ss_pred HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC
Q 025190 76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
+...+.... .....++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++.+.
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------- 149 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE----------- 149 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence 223332222 2356899999999999999986 9999999989999999999999999988887665
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-------CCCCCeeeCCcCchHHhH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-------~~~~~~~~~~~~el~~~l 223 (256)
.||+|+.|.++++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.+.+
T Consensus 150 ---~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 150 ---RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred ---CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 79999999999999999999999999999999999999999999876542 245999999998886654
No 7
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.97 E-value=2.4e-29 Score=200.20 Aligned_cols=199 Identities=24% Similarity=0.306 Sum_probs=152.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHH-cCCCC------Chh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRA-LGYDI------GAD 74 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~------~~~ 74 (256)
+++++|+||+||||+|+...+..+++. +++.++.+.......+. ..|.... .+.+ .+... ..+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEIRQ----LIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHHHH----HhcCCHHHHHHHHhccccchhHHHHHH
Confidence 578999999999999999999988886 66778877433333222 1222221 1111 11111 112
Q ss_pred hHhhhhhcCCCCC-CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 75 DYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
.++..+.+.+... ...++||+.++|..|+++|+ |+||.....++..++++|+..+|+.++++++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~--------- 143 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP--------- 143 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence 2222333322111 35899999999999999996 9999999999999999999999999999665554
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC------CCCCCCeeeCCcCchHHhHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV------NVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~------~~~~~~~~~~~~~el~~~l~ 224 (256)
.||+|..+..++++++++|++++||||+.+|+++|+++|+.++++.++. ....+++++.++.||...+.
T Consensus 144 -----~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 144 -----PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred -----CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 7999999999999999998899999999999999999999999998764 23569999999999987764
No 8
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.97 E-value=5e-29 Score=209.16 Aligned_cols=204 Identities=14% Similarity=0.182 Sum_probs=151.0
Q ss_pred CCCCCeEEEEecCCCccCCCc-cHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHc-CCCCCh---h
Q 025190 1 MDSPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRAL-GYDIGA---D 74 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~---~ 74 (256)
|-..+++|+||+||||+|+.. .+..+|.. +.+++|.+....... ....|..... +..+ ....+. +
T Consensus 127 ~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~~----~~~~G~~~~~~l~~ll~~~~~~~~~e 197 (381)
T PLN02575 127 MGCGWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFIL----RRVEGMKNEQAISEVLCWSRDPAELR 197 (381)
T ss_pred ccCCCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHhcCCCHHHHHHHHhhccCCHHHHH
Confidence 335789999999999999987 44567776 556778764332211 1223332221 2221 111111 1
Q ss_pred hH----hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 75 DY----HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 75 ~~----~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
.+ ...+.+.. .....++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.++++++...
T Consensus 198 ~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~------ 270 (381)
T PLN02575 198 RMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR------ 270 (381)
T ss_pred HHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC------
Confidence 22 22222211 2346789999999999999987 9999999999999999999999999999999875
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---CCCCCeeeCCcCchHH-hH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---VGEADYALENVNNLPQ-VV 223 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---~~~~~~~~~~~~el~~-~l 223 (256)
.||+|++|.++++++|++|++|++|||+..|+++|+++|+.+|++..+.. ...++++++++.+|.- .+
T Consensus 271 --------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l 342 (381)
T PLN02575 271 --------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDL 342 (381)
T ss_pred --------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999986432 2358999999999854 34
Q ss_pred HHHHh
Q 025190 224 PEIWV 228 (256)
Q Consensus 224 ~~~~~ 228 (256)
+.+..
T Consensus 343 ~~l~~ 347 (381)
T PLN02575 343 KNLAD 347 (381)
T ss_pred hhhhh
Confidence 44443
No 9
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.96 E-value=7.1e-29 Score=198.00 Aligned_cols=198 Identities=26% Similarity=0.362 Sum_probs=141.3
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHH--HHHHHHHHHHHhhh-----hHHHHHHcCCCCChhhHh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETK--ASSLRVELFKAYGS-----TLAGLRALGYDIGADDYH 77 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 77 (256)
+++|+||+||||+|+...+..++....+. ...+|.+... ...........++. ....+.........+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 68999999999999998887777654332 2345544221 11111111111111 111111122112222111
Q ss_pred hh---hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 78 GF---VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 78 ~~---~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.. +... ....+.++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 148 (221)
T TIGR02253 80 AFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV---------- 148 (221)
T ss_pred HHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence 11 1111 13456899999999999999986 9999999999999999999999999999998886
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC-------CCCCCeeeCCcCch
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN-------VGEADYALENVNNL 219 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~-------~~~~~~~~~~~~el 219 (256)
.||+|..|..+++++|++++++++|||+. +|+.+|+++|+.+|++.++.. ...+++++.++.+|
T Consensus 149 ----~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 149 ----EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred ----CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 79999999999999999999999999998 899999999999999986542 23578888888765
No 10
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.96 E-value=4.3e-29 Score=199.13 Aligned_cols=196 Identities=19% Similarity=0.228 Sum_probs=146.5
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHH----HcCCCC-ChhhH--
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLR----ALGYDI-GADDY-- 76 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~-~~~~~-- 76 (256)
+|+|+||+||||+|+...+..++.+ +.+++|.+....+.... ..|.... .+. ..+... ..+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEVQSA----WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHHHHh----hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 5899999999999999999999887 44567775433222110 1222211 111 112211 11112
Q ss_pred --hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc--cccceeEecccCCcccccCCCC
Q 025190 77 --HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 77 --~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
...+.+.+......++||+.++|+.|+++|+ ++||+....++..++++|+. ++|+.++++++...
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~-------- 143 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA-------- 143 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence 2222222222356899999999999999886 99999999999999999998 99999999998775
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeE-EEEcCCCC------CCCCCeeeCCcCchHH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRT-VLVGKTVN------VGEADYALENVNNLPQ 221 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~------~~~~~~~~~~~~el~~ 221 (256)
.||+|++|..+++++++. |++|++|||+.+|+++|+++|+.+ +++.++.. ...+++++.++.+|..
T Consensus 144 ------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 144 ------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred ------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 799999999999999997 799999999999999999999999 88876532 3568899999888766
Q ss_pred hH
Q 025190 222 VV 223 (256)
Q Consensus 222 ~l 223 (256)
++
T Consensus 218 ~~ 219 (220)
T TIGR03351 218 LL 219 (220)
T ss_pred hh
Confidence 43
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.96 E-value=7.5e-29 Score=201.76 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=143.8
Q ss_pred CCeEEEEecCCCccCCCcc-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH---------------HHHHHc
Q 025190 4 PFNCLVFDLDDTLYPSETG-IAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL---------------AGLRAL 67 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 67 (256)
++|+|+||+||||+|+... +..++.+ ..+++|.+.... .. ....|... .....+
T Consensus 1 ~~k~viFD~DGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~~-~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 70 (253)
T TIGR01422 1 KIEAVIFDWAGTTVDFGSFAPTQAFVE-----AFAEFGVQITLE-EA----RGPMGLGKWDHIRALLKMPAVAERWRAKF 70 (253)
T ss_pred CceEEEEeCCCCeecCCCccHHHHHHH-----HHHHcCCCccHH-HH----HHhcCccHHHHHHHHhcCHHHHHHHHHHh
Confidence 3689999999999998653 4667776 445566643222 11 11111110 011222
Q ss_pred CCCCChhhH---hhhhh----cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeEec
Q 025190 68 GYDIGADDY---HGFVH----GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICF 136 (256)
Q Consensus 68 ~~~~~~~~~---~~~~~----~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~~~ 136 (256)
+...+.+.+ ...+. +.+ .....++||+.++|+.|+++|+ |+||+....++.+++++|+..+| +.++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 71 GRLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTT 149 (253)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcc
Confidence 333333222 12221 111 2457899999999999999986 99999999999999999999986 899999
Q ss_pred ccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----------
Q 025190 137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---------- 205 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---------- 205 (256)
++... .||+|+.|..+++++|+. |++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 150 ~~~~~--------------~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~ 215 (253)
T TIGR01422 150 DDVPA--------------GRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYR 215 (253)
T ss_pred ccCCC--------------CCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHH
Confidence 88775 799999999999999995 99999999999999999999999999976542
Q ss_pred -------------------CCCCCeeeCCcCchHHhH
Q 025190 206 -------------------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 206 -------------------~~~~~~~~~~~~el~~~l 223 (256)
..+|+++++++.+|..+|
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 216 ALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred hCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 256999999999987654
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.96 E-value=1e-28 Score=200.47 Aligned_cols=202 Identities=13% Similarity=0.154 Sum_probs=148.9
Q ss_pred CCCeEEEEecCCCccCCCc-cHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHc-CCCCChh---hH
Q 025190 3 SPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRAL-GYDIGAD---DY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~---~~ 76 (256)
+.+|+|+||+||||+|+.. .+..+|.+ +.+++|++....+.. ....|.... .+..+ ....+.+ .+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~~----~~~~G~~~~~~~~~l~~~~~~~~~~~~l 92 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFLL----KRAEGMKNEQAISEVLCWSRDFLQMKRL 92 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHHH----HHhcCCCHHHHHHHHhccCCCHHHHHHH
Confidence 4679999999999999964 45568887 666778764332211 112332221 11111 1111111 11
Q ss_pred hhhhhc---CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 77 HGFVHG---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 77 ~~~~~~---~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
...+.. ........++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.+++++++..
T Consensus 93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~--------- 163 (260)
T PLN03243 93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR--------- 163 (260)
T ss_pred HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC---------
Confidence 111111 1112356789999999999999987 9999999999999999999999999999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC---CCCCCCeeeCCcCchHHhHHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV---NVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~---~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+||+|++|..+++++|+++++|++|||+.+|+++|+++|+.++++.... ....+++++.++.+|....-..+
T Consensus 164 -----~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~ 238 (260)
T PLN03243 164 -----GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNL 238 (260)
T ss_pred -----CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhh
Confidence 7999999999999999999999999999999999999999999986322 12358999999999887664444
No 13
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.96 E-value=9e-29 Score=197.49 Aligned_cols=195 Identities=19% Similarity=0.221 Sum_probs=146.1
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH----HH-HHcCC-CCChhhH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA----GL-RALGY-DIGADDY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~-~~~~~~~ 76 (256)
.++|+|+||+||||+|+...+..++.+ +.+.+|.+........ ...|.... .+ ..... ....+.+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREELP----DTLGLRIDQVVDLWYARQPWNGPSRQEV 75 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHHH----HhhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 478999999999999999888888876 5566776543322211 12221111 11 11111 1122222
Q ss_pred hh----hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 77 HG----FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 77 ~~----~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.. .+.+.. .....++||+.++|+.|+++|+ ++||+....++..++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------- 146 (222)
T PRK10826 76 VQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY-------- 146 (222)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC--------
Confidence 21 121111 2457899999999999999886 9999999999999999999999999999988765
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC-----CCCCeeeCCcCchHH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV-----GEADYALENVNNLPQ 221 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~-----~~~~~~~~~~~el~~ 221 (256)
+||+|+.+..+++++|++|++|++|||+.+|+++|+++|++++++.++... ..++.++.++.+|..
T Consensus 147 ------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 147 ------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred ------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 799999999999999999999999999999999999999999999876422 357888888877653
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.96 E-value=1.7e-28 Score=195.24 Aligned_cols=191 Identities=20% Similarity=0.251 Sum_probs=142.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCCCChhhHhhhhhc
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (256)
++|+|+||+||||+|+...+..++.. +++++|++..... .. ..|... ..+..+....+.+.+...+..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~----~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVL----NF--IHGKQAITSLRHFMAGASEAEIQAEFTR 70 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHH----HH--HcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence 57999999999999999988888887 5667787642111 11 112221 122222212222222222211
Q ss_pred -----CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 83 -----RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 83 -----~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
........++||+.++|+.|+++|+ ++||+.....+..++..++ .+|+.++++++...
T Consensus 71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------- 136 (218)
T PRK11587 71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------- 136 (218)
T ss_pred HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC-------------
Confidence 1113467899999999999999986 9999988888888888988 46788888887765
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---CCCCCeeeCCcCchH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---VGEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---~~~~~~~~~~~~el~ 220 (256)
.||+|..|..+++++|++|++|++|||+..|+++|+++|+.++++.++.. ...++++++++.+|.
T Consensus 137 -~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 137 -GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred -CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 79999999999999999999999999999999999999999999986532 246889999888874
No 15
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.96 E-value=2.7e-28 Score=193.60 Aligned_cols=191 Identities=24% Similarity=0.316 Sum_probs=142.8
Q ss_pred EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChh---hHhh-
Q 025190 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGAD---DYHG- 78 (256)
Q Consensus 8 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~- 78 (256)
|+||+||||+|+...+..++.. +.+++|.+........ ...|... ..+...+...+.+ .+..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARVI----GFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999998877777776 4566776432222211 1122221 1122222222222 2222
Q ss_pred ---hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC
Q 025190 79 ---FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 ---~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+.. .....++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++...
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------- 139 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence 222211 2356899999999999999886 9999999999999999999999999999888765
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHh
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQV 222 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~ 222 (256)
.||+|+.|.+++++++++++++++|||+.+|+++|+++|+.++++.++.. ...++++++++.+|..+
T Consensus 140 ---~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 140 ---RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ---CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 79999999999999999999999999999999999999999999976532 24689999999887654
No 16
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=1.1e-27 Score=191.66 Aligned_cols=199 Identities=23% Similarity=0.300 Sum_probs=150.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-----HHHHcCCCCChhhH-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDY- 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~- 76 (256)
+++++|+||+||||+|+...+..++.. +.+++|.+......... ..|.... .+...+...+.+.+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVRT----WVGNGADVLVERALTWAGREPDEELLE 74 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhCccHHHHHHHHHhhccCCccHHHHH
Confidence 788999999999999998877777776 45667765333322211 1121111 11111222332222
Q ss_pred ------hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 77 ------HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 77 ------~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
...+.... .....++||+.++++.|++.|+ ++||+....++..++++|+..+|+.++++++...
T Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 147 (226)
T PRK13222 75 KLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN------ 147 (226)
T ss_pred HHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC------
Confidence 22222211 2356899999999999999875 9999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQ 221 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~ 221 (256)
.||+|.++..++++++++++++++|||+.+|+++|+++|+.++++..+.. ...+++++.++.+|..
T Consensus 148 --------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~ 219 (226)
T PRK13222 148 --------KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLP 219 (226)
T ss_pred --------CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHH
Confidence 79999999999999999999999999999999999999999999986542 2468899999999988
Q ss_pred hHHH
Q 025190 222 VVPE 225 (256)
Q Consensus 222 ~l~~ 225 (256)
++..
T Consensus 220 ~l~~ 223 (226)
T PRK13222 220 LLGL 223 (226)
T ss_pred HHHH
Confidence 8754
No 17
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.96 E-value=2.2e-27 Score=189.30 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=142.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh------HHHHHHcCCCCChhhH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST------LAGLRALGYDIGADDY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 76 (256)
.++|+|+||+||||+|+... ...|.+...+.+.+.+|.+...........+...+.. .......+. ....+
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 84 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGL--DICAM 84 (224)
T ss_pred ccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCC--CHHHH
Confidence 35799999999999996311 2344443333455677887543332211111111000 011111111 11111
Q ss_pred hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
... ......++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++.+.
T Consensus 85 ~~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~------------ 147 (224)
T PRK14988 85 TTE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY------------ 147 (224)
T ss_pred HHH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC------------
Confidence 111 13557899999999999999986 9999999999999999999999999999998876
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCC--CCCCCeeeCCcCchHHhHHHH
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVN--VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~--~~~~~~~~~~~~el~~~l~~~ 226 (256)
.||+|+.|.++++++|++|++|++|||+.+|+++|+++|+.+ +++..+.. +..+.....++.++.+++..+
T Consensus 148 --~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 148 --PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred --CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence 799999999999999999999999999999999999999985 66765542 344556667787777777654
No 18
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.96 E-value=4.2e-28 Score=188.80 Aligned_cols=176 Identities=20% Similarity=0.300 Sum_probs=132.3
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCCCChhh
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYDIGADD 75 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 75 (256)
||.++++|+||+||||+|+...+..++.+ +..++|.+.... .. ....|.. .......+.....+.
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 70 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDEQ-AM----VALNGSPTWRIAQAIIELNQADLDPHA 70 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHH-HH----HHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence 78889999999999999999888888887 445677653221 11 1112211 111222233334333
Q ss_pred Hhhhhhc---CCCCCCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 76 YHGFVHG---RLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 76 ~~~~~~~---~~~~~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
+...+.. ........++|+ .++|..|++.. + |+||+....++..++++|+.++|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--------- 140 (188)
T PRK10725 71 LAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH--------- 140 (188)
T ss_pred HHHHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC---------
Confidence 3332111 111355678886 58999998652 2 9999999999999999999999999999998876
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.||+|+.|.+++++++++|++|++|||+.+|+++|+++|+.+|++.
T Consensus 141 -----~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 141 -----HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -----CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 7999999999999999999999999999999999999999999885
No 19
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.96 E-value=2.8e-27 Score=189.08 Aligned_cols=198 Identities=22% Similarity=0.321 Sum_probs=144.7
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHH--HH---HHHHHHh--hh---h-------HHHHHHc
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS--LR---VELFKAY--GS---T-------LAGLRAL 67 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~--~~---~-------~~~~~~~ 67 (256)
+|+|+||+||||+|+...+..++.+ +.+.+|.+...... .. ...+..+ +. . ...+...
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999999887777776 44556654321111 10 0011111 00 0 0012223
Q ss_pred CCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc
Q 025190 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS 144 (256)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 144 (256)
+.....+.+...+.+.. .....++||+.++|+.|+++ + ++||+....++..++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI--- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC---
Confidence 33222223333333322 23468999999999999988 5 9999999999999999999999999999988876
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCc
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVA-NVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV----NVGEADYALENVNN 218 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~-~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~e 218 (256)
.||+|.+|.++++++ +++|+++++|||+. +|+.+|+++|+.+++++++. ....+++++.++.+
T Consensus 151 -----------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~e 219 (224)
T TIGR02254 151 -----------QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEE 219 (224)
T ss_pred -----------CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHH
Confidence 799999999999999 99999999999998 79999999999999997643 22457889999888
Q ss_pred hHHhH
Q 025190 219 LPQVV 223 (256)
Q Consensus 219 l~~~l 223 (256)
|.++|
T Consensus 220 l~~~~ 224 (224)
T TIGR02254 220 LYEIL 224 (224)
T ss_pred HHhhC
Confidence 87653
No 20
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.95 E-value=6.8e-28 Score=190.13 Aligned_cols=192 Identities=21% Similarity=0.267 Sum_probs=143.8
Q ss_pred EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCCCCh-hhHhhhhhcCCC
Q 025190 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGA-DDYHGFVHGRLP 85 (256)
Q Consensus 8 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 85 (256)
|+||+||||+|+...+..++.++++ +.+|.+....+. +....|... ..+..++.+... +.+.....+ .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYR----EVVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHH----HhcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 6899999999999988888887432 224543222221 111223222 222333322111 112111211 1
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
.....++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++... +||+|..
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~ 136 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------PKPAPDI 136 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC--------------CCCChHH
Confidence 3467899999999999999986 9999999999999999999999999999888765 7999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC------CCCCCCeeeCCcCchHHhH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV------NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~------~~~~~~~~~~~~~el~~~l 223 (256)
+..++++++++++++++|||+.+|+.+|+++|+.++++.++. ....+++++.++.+|..++
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 999999999999999999999999999999999999887654 2356899999998887765
No 21
>PLN02940 riboflavin kinase
Probab=99.95 E-value=1.4e-27 Score=203.86 Aligned_cols=193 Identities=22% Similarity=0.301 Sum_probs=148.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCCCChhhHhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYDIGADDYHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 78 (256)
.+++|+||+||||+|+...+..++.. +++++|.+..... .....|.. ...+...+.....+.+..
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 47899999999999999988888887 5566776543222 11222221 112233344444444333
Q ss_pred hhhcCC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHH-hcCcccccceeEecccCCcccccCCCCCCC
Q 025190 79 FVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLK-RLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 ~~~~~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~-~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+.+ ......++||+.++|+.|+++|+ |+||+....++..++ .+|+.++|+.+++++++..
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~----------- 148 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK----------- 148 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence 222211 13467899999999999999986 999999999998887 7899999999999998876
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCchH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV----NVGEADYALENVNNLP 220 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~el~ 220 (256)
+||+|+.|.+++++++++|++|++|||+.+|+++|+++|+.++++.++. ....++++++++.++.
T Consensus 149 ---~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 149 ---GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred ---CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcC
Confidence 7999999999999999999999999999999999999999999998653 2356889999988875
No 22
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.95 E-value=1.4e-27 Score=189.68 Aligned_cols=177 Identities=27% Similarity=0.336 Sum_probs=135.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh----hHHHHHH-cCCC--CChhhH
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS----TLAGLRA-LGYD--IGADDY 76 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~--~~~~~~ 76 (256)
++|+|+|||||||+|+.+.+.++|.+ +++++|+....... ....|. ....+.. .... ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 46899999999999999999999998 66778876443211 111221 1111111 1111 111121
Q ss_pred hhhhh--cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 77 HGFVH--GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 77 ~~~~~--~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
..... .........++||+.++|+.|+++++ ++|++....++..++.+|+.++|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 11111 11125678999999999999999876 7777788899999999999999999999999886
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+||.|+.|..+++++|++|++|+.|+|+.+++++|+++||.++++..++
T Consensus 141 ----~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~ 189 (221)
T COG0637 141 ----GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGH 189 (221)
T ss_pred ----CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCC
Confidence 7999999999999999999999999999999999999999999998643
No 23
>PRK09449 dUMP phosphatase; Provisional
Probab=99.95 E-value=5.7e-27 Score=187.40 Aligned_cols=122 Identities=22% Similarity=0.331 Sum_probs=107.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++|+.|++ ++ ++||+....++..++++|+.++|+.++++++.+. .||+|.+|.
T Consensus 93 ~~~~~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~--------------~KP~p~~~~ 157 (224)
T PRK09449 93 ICTPLPGAVELLNALRG-KVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV--------------AKPDVAIFD 157 (224)
T ss_pred cCccCccHHHHHHHHHh-CCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC--------------CCCCHHHHH
Confidence 46799999999999995 44 9999999999999999999999999999998886 799999999
Q ss_pred HHHHHcCCC-CCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCchHHhHH
Q 025190 165 LALHVANVD-PRHALFLDDNI-KNVTAGKALGLRTVLVGKTV----NVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~-~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~el~~~l~ 224 (256)
++++++|+. +++|++|||+. +|+.+|+++|+.++++.++. ....+++++.++.+|.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 158 YALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 999999985 57999999998 69999999999999997432 22458899999998887653
No 24
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=2e-27 Score=194.75 Aligned_cols=199 Identities=23% Similarity=0.311 Sum_probs=148.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHc-C-----CCCCh--
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRAL-G-----YDIGA-- 73 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-----~~~~~-- 73 (256)
.++|+|+||+||||+|+...+..++.. +..++|.+........ ...|..... .... . ...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 81 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAVR----HWVGNGAPVLVRRALAGSIDHDGVDDEL 81 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhChhHHHHHHHHhcccccccCCCHHH
Confidence 467999999999999999988888887 5667777643332221 112221111 1110 0 11221
Q ss_pred -hhHhhhhhcCCC--CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 74 -DDYHGFVHGRLP--YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 74 -~~~~~~~~~~~~--~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
+.+...+.+.+. .....++||+.++|+.|+++|+ ++||+....++..++++++..+|+.++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------ 155 (272)
T PRK13223 82 AEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------ 155 (272)
T ss_pred HHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC------
Confidence 122222222111 2346789999999999999886 9999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQ 221 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~ 221 (256)
.||+|..+..+++++|+++++|++|||+.+|+++|+++|++++++.++.. ...++++++++.+|.+
T Consensus 156 --------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 --------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred --------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 79999999999999999999999999999999999999999999976532 2469999998888876
Q ss_pred hHH
Q 025190 222 VVP 224 (256)
Q Consensus 222 ~l~ 224 (256)
++.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 554
No 25
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=1.3e-27 Score=190.74 Aligned_cols=201 Identities=17% Similarity=0.191 Sum_probs=142.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH--HhhhhHHHHHHcCCCCChhhHhhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFK--AYGSTLAGLRALGYDIGADDYHGFV 80 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (256)
+++|+|+||+||||+|+...+..++.+ ....+|.+.... +....+.. ............+.....+++...+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLE-EVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVY 75 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHH-HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 468999999999999998888888877 445677653322 11111110 0111112223345444555554433
Q ss_pred hcCC---CCCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccc-eeEecccCCcccccCCCCCCCCCCC
Q 025190 81 HGRL---PYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 81 ~~~~---~~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
.+.+ ......++||+.++|+.|+-.-.++||+....++..++++|+.++|+ .++++++.+. .
T Consensus 76 ~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~--------------~ 141 (221)
T PRK10563 76 RAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR--------------W 141 (221)
T ss_pred HHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC--------------C
Confidence 3211 12457899999999999963223999999999999999999999996 6778777775 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-C---CCCCCeeeCCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-N---VGEADYALENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~---~~~~~~~~~~~~el~~~l 223 (256)
||+|+.|..++++++++|++|++|||+.+|+++|+++|+.++++..+. . ...++.++.++.+|.+++
T Consensus 142 KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 212 (221)
T PRK10563 142 KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELW 212 (221)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999886432 1 123344566666665543
No 26
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=2.9e-27 Score=193.15 Aligned_cols=197 Identities=18% Similarity=0.268 Sum_probs=148.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCC-CChhhH----h
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYD-IGADDY----H 77 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~----~ 77 (256)
++++|+||+||||+|+.+.+..++.+ +.+++|.+....... ....+... ..+..++.. ...+.+ .
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~~----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERDY----AQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 67899999999999999888888887 556777653222211 11122111 222333321 111222 2
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 78 ~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
..+... ...++++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.++++++.
T Consensus 132 ~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~--------------- 194 (273)
T PRK13225 132 RQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI--------------- 194 (273)
T ss_pred HHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence 222221 3567899999999999999987 99999999999999999999999998876543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhHHHHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
++++..+..+++++++++++|++|||+.+|+.+|+++|+.++++.++.. ...|+++++++.+|.+++.++++
T Consensus 195 --~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 195 --LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred --CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 3456889999999999999999999999999999999999999987642 35699999999999998877654
No 27
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.95 E-value=1.6e-26 Score=181.38 Aligned_cols=105 Identities=23% Similarity=0.392 Sum_probs=98.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++++. .||+|.+|
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~--------------~KP~~~~~ 154 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA--------------YKPAPQVY 154 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC--------------CCCCHHHH
Confidence 456899999999999999986 9999999999999999999999999999998886 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
.++++++|++|+++++|||+.+|+.+|+++|+.+|+++++.+
T Consensus 155 ~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 155 QLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred HHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 999999999999999999999999999999999999987543
No 28
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.94 E-value=2.4e-26 Score=178.37 Aligned_cols=170 Identities=24% Similarity=0.321 Sum_probs=125.5
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChhhHh--
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGADDYH-- 77 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-- 77 (256)
+|+|+||+||||+|+...+..++.. +.+++|.+... ... ....|... ..+...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~-~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK-QYN----TSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH-HHH----HHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4799999999999999887778776 45566765321 110 11112111 1122222233333322
Q ss_pred -----hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 78 -----GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 78 -----~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
..+.+.+......++||+.++|+.|+++|+ ++|++ ..++..++++|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 122222112357899999999999999886 77777 668889999999999999999988775
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.||+|..|.+++++++++++++++|||+.+|+++|+++|+.+++|
T Consensus 141 ------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 141 ------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 799999999999999999999999999999999999999999875
No 29
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.94 E-value=9.2e-26 Score=181.76 Aligned_cols=199 Identities=16% Similarity=0.173 Sum_probs=136.1
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHH----------H-h-hhhHHHHHHcC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF---SETKASSLRVELFK----------A-Y-GSTLAGLRALG 68 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------~-~-~~~~~~~~~~~ 68 (256)
++|+|+||+||||+|+.+.+..+++.+++.+....... .......+...+.. . . ......+...+
T Consensus 9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 88 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDAG 88 (238)
T ss_pred CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHcC
Confidence 56999999999999999988888887554321100011 11111111110000 0 0 01112233444
Q ss_pred CCCChh-----hHhhhhhcCCCCCCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCc
Q 025190 69 YDIGAD-----DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141 (256)
Q Consensus 69 ~~~~~~-----~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 141 (256)
.+.... .....+.. ....+.++||+.++|+.|++.. + ++||+... ++..|+..+|+.++++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~ 161 (238)
T PRK10748 89 LSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR 161 (238)
T ss_pred CCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCc
Confidence 432221 11111221 1245789999999999998763 2 89998765 478999999999999988876
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC--------CCCCee
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV--------GEADYA 212 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~ 212 (256)
.||+|.+|..+++++|++|++|++|||+. .|+.+|+++|+.++|+++.... ..|++.
T Consensus 162 --------------~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~ 227 (238)
T PRK10748 162 --------------SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIE 227 (238)
T ss_pred --------------CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEE
Confidence 79999999999999999999999999995 9999999999999999864321 358888
Q ss_pred eCCcCchHHhH
Q 025190 213 LENVNNLPQVV 223 (256)
Q Consensus 213 ~~~~~el~~~l 223 (256)
+.++.||.++|
T Consensus 228 i~~l~el~~~~ 238 (238)
T PRK10748 228 ISRLASLTSLI 238 (238)
T ss_pred ECCHHHHHhhC
Confidence 88888887653
No 30
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.94 E-value=9.1e-26 Score=180.96 Aligned_cols=123 Identities=26% Similarity=0.452 Sum_probs=112.7
Q ss_pred CCCCChhHHHHHHhhhcC--cEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQR--KIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~--~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
..+++|++.+.|+.|+++ -.++||+....++..++.+|+.++||.++++++.+. .||+|.+|..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~--------------~KP~~~~f~~ 162 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV--------------AKPDPEIFEY 162 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc--------------CCCCcHHHHH
Confidence 579999999999999998 239999999999999999999999999999999986 8999999999
Q ss_pred HHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC-----CCCCeeeCCcCchHHhHH
Q 025190 166 ALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV-----GEADYALENVNNLPQVVP 224 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~-----~~~~~~~~~~~el~~~l~ 224 (256)
+++++|++|+++++|||+. +||.+|+++||++||++++... ..+++.+.++.+|.+++.
T Consensus 163 ~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 163 ALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred HHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9999999999999999999 7889999999999999876532 468899999999888775
No 31
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.94 E-value=2.5e-26 Score=178.35 Aligned_cols=171 Identities=23% Similarity=0.260 Sum_probs=124.5
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh---hHHHHHHcCCCCChhhHhh-----
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS---TLAGLRALGYDIGADDYHG----- 78 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----- 78 (256)
+|+||+||||+|+...+..++.+ +.+.+|++..... . ..+...+. ....+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEF-N--ESLKGVSREDSLERILDLGGKKYSEEEKEELAERK 72 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH-H--HHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 48999999999999988888887 5566777532211 1 11111111 1112223344444333221
Q ss_pred --hhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC
Q 025190 79 --FVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 --~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+.+. .....++||+.++|+.|+++|+ ++||+.. .+..++.+|+..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (185)
T TIGR01990 73 NDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK----------- 139 (185)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC-----------
Confidence 1211110 1235789999999999999986 7887643 4678999999999999999988876
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.||+|+.|.++++++++++++|++|||+.+|+++|+++|+++|+|+
T Consensus 140 ---~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 140 ---GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ---CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 7999999999999999999999999999999999999999999874
No 32
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=1.1e-25 Score=185.52 Aligned_cols=199 Identities=19% Similarity=0.284 Sum_probs=136.4
Q ss_pred CCCeEEEEecCCCccCCC-ccHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHhhhhH----HHHHHcCCC------
Q 025190 3 SPFNCLVFDLDDTLYPSE-TGIAAAVKRNIEGFLIEKCGFSET-KASSLRVELFKAYGSTL----AGLRALGYD------ 70 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 70 (256)
..+++|+||+||||+|+. ..+..+|.+ +++.+|++.. ........+. ..|... ..+...+..
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 111 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVELYDELL-NIGGGKERMTWYFNENGWPTSTIEK 111 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHHHHHHH-ccCCChHHHHHHHHHcCCCcccccc
Confidence 357899999999999999 888889887 5566777311 1011000011 122111 111111111
Q ss_pred --CChhh-------Hh----hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc--e
Q 025190 71 --IGADD-------YH----GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--Q 132 (256)
Q Consensus 71 --~~~~~-------~~----~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~--~ 132 (256)
..++. +. ..+.+......+.++||+.++|+.|+++|+ ++||+....+..+++.++...+++ .
T Consensus 112 ~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 112 APKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE
Confidence 11111 11 112211112236899999999999999986 999999999998888774434443 2
Q ss_pred eEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCC
Q 025190 133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGE 208 (256)
Q Consensus 133 i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~ 208 (256)
++++++++. .||+|++|.++++++|++|++|++|||+.+|+++|+++|+.+|++.++.. -..
T Consensus 192 ~v~~~~~~~--------------~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ 257 (286)
T PLN02779 192 VFAGDDVPK--------------KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSG 257 (286)
T ss_pred EEeccccCC--------------CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCC
Confidence 336666654 79999999999999999999999999999999999999999999976532 145
Q ss_pred CCeeeCCcCchHH
Q 025190 209 ADYALENVNNLPQ 221 (256)
Q Consensus 209 ~~~~~~~~~el~~ 221 (256)
++++++++.++..
T Consensus 258 ad~vi~~~~~l~~ 270 (286)
T PLN02779 258 ADAVFDCLGDVPL 270 (286)
T ss_pred CcEEECChhhcch
Confidence 8999999999764
No 33
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.93 E-value=1.1e-25 Score=197.51 Aligned_cols=201 Identities=15% Similarity=0.226 Sum_probs=143.9
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhhhhHHH-HHHcCCCCC---hhhHhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKC-GFSETKASSLRVELFKAYGSTLAG-LRALGYDIG---ADDYHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 78 (256)
|+++|+||+||||+|+...+..+|.++++++..... +.. .... .+....|..... +..+..... .+.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~-~~~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~ 314 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTV-TPID----KYREIMGVPLPKVWEALLPDHSLEIREQTDA 314 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCC-CCHH----HHHHHcCCChHHHHHHHhhhcchhHHHHHHH
Confidence 568999999999999999999999986655421111 111 1111 111222322211 111111111 122222
Q ss_pred hhhc----CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 79 FVHG----RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 79 ~~~~----~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.+.+ .......+++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~----------- 383 (459)
T PRK06698 315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN----------- 383 (459)
T ss_pred HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------
Confidence 2222 1112356899999999999999886 999999999999999999999999999988764
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchHHhHHHH
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~~~l~~~ 226 (256)
.||+|..+..++++++ +++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.+|.+++..+
T Consensus 384 ----~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 384 ----SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred ----CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 4677789999998865 68999999999999999999999999976532 245899999999998887654
No 34
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.93 E-value=4.3e-25 Score=173.92 Aligned_cols=173 Identities=20% Similarity=0.287 Sum_probs=123.8
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHH--HHHHHHHH-------h----hhhH---------HH
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS--LRVELFKA-------Y----GSTL---------AG 63 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~----~~~~---------~~ 63 (256)
|+|+||+||||+|+...+..++.+ +.+++|.+....+. .....+.. + |... ..
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999999988888887 55667775322111 10011110 0 1111 11
Q ss_pred HHHcCCCCChhhH---hhhhhc-CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEec
Q 025190 64 LRALGYDIGADDY---HGFVHG-RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF 136 (256)
Q Consensus 64 ~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~ 136 (256)
+...+. ...+.+ ...+.. ........++||+.++|+.|+++|+ |+||+... ++..++.+|+..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 122221 111122 121111 1112345789999999999999875 89998765 57889999999999999999
Q ss_pred ccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEE
Q 025190 137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVL 199 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~ 199 (256)
++.+. .||+|..|.++++++|++|+++++|||+. +|+.+|+++|+.+||
T Consensus 154 ~~~~~--------------~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 154 YEVGA--------------EKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cccCC--------------CCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 88876 79999999999999999999999999998 899999999999885
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.93 E-value=6.9e-26 Score=173.78 Aligned_cols=172 Identities=31% Similarity=0.501 Sum_probs=126.5
Q ss_pred EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHcCCCCChhhHhhhhhcCCCC
Q 025190 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFVHGRLPY 86 (256)
Q Consensus 8 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 86 (256)
|+||+||||+|+...+..++.. .+.+.++.+.. .+.........+..... .+...+ .....+.+.+.+....
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-AEELRELFGKSYEEALERLLERFG--IDPEEIQELFREYNLE 73 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-HHHHHHHTTSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-HHHHHHHhCCCHHHHHHHhhhccc--hhHHHHHHHhhhhhhh
Confidence 7999999999988766666665 23455555422 22221111111111111 111111 1133333333332223
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++.+. .||++.+|
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~--------------~Kp~~~~~ 139 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS--------------RKPDPDAY 139 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS--------------STTSHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh--------------hhhHHHHH
Confidence 677999999999999998876 9999999999999999999999999999998886 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.+++++++++|+++++|||+..|+.+|+++|+.+|+|
T Consensus 140 ~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 140 RRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp HHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 9999999999999999999999999999999999986
No 36
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=6.7e-24 Score=200.71 Aligned_cols=194 Identities=19% Similarity=0.293 Sum_probs=147.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHH-----HHcCC-CCChhh-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-----RALGY-DIGADD- 75 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~- 75 (256)
+++|+|+||+||||+|+...+..++.+ +++++|++..... +...+|.....+ ...+. ....+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 468999999999999999988888887 5566777643221 112223222111 11121 122222
Q ss_pred ---HhhhhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc-cccceeEecccCCcccccCC
Q 025190 76 ---YHGFVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA-DCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 76 ---~~~~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~ 147 (256)
+...+.+.+. .....++||+.++|+.|+++|+ |+||+....++..++++|+. .+|+.++++++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------ 216 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------ 216 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence 2222222111 1223579999999999999987 99999999999999999996 78999999998876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLP 220 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~ 220 (256)
.||+|++|.+++++++++|++|++|||+..|+++|+++||.++++.++.. ...++++++++.++.
T Consensus 217 --------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 217 --------LKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred --------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 79999999999999999999999999999999999999999999987642 357899999999874
No 37
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.91 E-value=7.1e-24 Score=167.95 Aligned_cols=102 Identities=25% Similarity=0.283 Sum_probs=89.1
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHH--HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNH--AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
...++||+.++|+.|+++|+ ++||+.... ....+...++.++|+.++++++.+. .||+|..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~KP~p~~ 157 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------RKPDPRI 157 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC--------------CCCCHHH
Confidence 56899999999999999886 889986543 3334555788899999999888875 7999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
|..+++++|++|++|++|||+..|+.+|+++|+.++++.+.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999998653
No 38
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.91 E-value=1e-23 Score=165.29 Aligned_cols=180 Identities=9% Similarity=0.058 Sum_probs=120.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-H-HHHHcCCCCChhh---Hhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-A-GLRALGYDIGADD---YHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~---~~~ 78 (256)
|+|+|+||+||||+|... ++.. +.+++|++.... ....+... . ....++ ...+. +..
T Consensus 1 m~k~viFDlDGTLiD~~~----~~~~-----~~~~~g~~~~~~-------~~~~g~~~~~~~~~~~~--~~~~~~~~~~~ 62 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQS----GLPY-----FAQKYNIPTDHI-------LKMIQDERFRDPGELFG--CDQELAKKLIE 62 (197)
T ss_pred CCcEEEEecCCceEchhh----ccHH-----HHHhcCCCHHHH-------HHHHhHhhhcCHHHHhc--ccHHHHHHHhh
Confidence 368999999999999543 3333 456778764211 11111110 0 111111 12222 222
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccc----cceeEecccCCcccccCCCCCCC
Q 025190 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADC----FDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 ~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+........++||+.++|+.|++.+. ++||+........++.+++..+ |+.+++++.
T Consensus 63 ~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------- 128 (197)
T PHA02597 63 KYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------- 128 (197)
T ss_pred hhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------
Confidence 22211113456799999999999988643 7788766666667778877654 456666554
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc--CCeEEEEcCCCCC--CCCCeeeCCcCchH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL--GLRTVLVGKTVNV--GEADYALENVNNLP 220 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~--G~~~v~v~~~~~~--~~~~~~~~~~~el~ 220 (256)
.||||+.|..+++++| ++++++|||+.+|+.+|+++ |+.+++++++... ..+++.+.++.|+.
T Consensus 129 ---~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 129 ---DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred ---CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHh
Confidence 3677899999999999 78899999999999999999 9999999877543 34667788777764
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.90 E-value=2.9e-23 Score=165.41 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=125.4
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH----HHHHHcCCCCChhhHh
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL----AGLRALGYDIGADDYH 77 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 77 (256)
++++|+|+||+||||+++.. +.. +...+|.+.... .....+....-... ..+..+ .....+.+.
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~-----~~~-----l~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 78 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET-----IDE-----IAKIAGVEEEVS-EITERAMRGELDFKASLRERVALL-KGLPVELLK 78 (219)
T ss_pred hccCCEEEEeCcccCCCchH-----HHH-----HHHHhCCHHHHH-HHHHHHHcCCCCHHHHHHHHHHHh-CCCCHHHHH
Confidence 46789999999999999852 333 344556542221 11111111100000 111111 122233332
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 78 ~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
... ....++||+.++|+.|+++|+ |+|++....++.+++.+|+..+|+..+..++.. +.+. ......
T Consensus 79 ~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~---~~~~-~~~~~~ 148 (219)
T TIGR00338 79 EVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK---LTGL-VEGPIV 148 (219)
T ss_pred HHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE---EEEE-ecCccc
Confidence 222 345799999999999999886 999999999999999999988886543322110 0000 001112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVN 217 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~ 217 (256)
.++||+..++.+++++++++++|++|||+.+|+++|+.+|+.+++.+.......+++++.+.+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKD 211 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCC
Confidence 356789999999999999999999999999999999999999776544333456788877553
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.90 E-value=3.4e-24 Score=165.94 Aligned_cols=97 Identities=36% Similarity=0.540 Sum_probs=89.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
..++||+.++|+.|+++|+ ++||+.... ...+.++|+.++|+.++++++.+. +||+|..|..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~~~~ 148 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR--------------GKPDPDIYLL 148 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC--------------CCCCHHHHHH
Confidence 6899999999999999885 999998888 666777999999999999888775 8999999999
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
++++++++|+++++|||+..|+.+|+++|+.+|++
T Consensus 149 ~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 149 ALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred HHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999875
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.90 E-value=2e-22 Score=158.14 Aligned_cols=120 Identities=18% Similarity=0.346 Sum_probs=99.3
Q ss_pred HcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh-cCcccccceeEecccCCc
Q 025190 66 ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNP 141 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~ 141 (256)
..+...+.+.+...+.+. ...++||+.++|+.|+++|+ ++||+........+.. .++..+|+.++++++.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~----~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~ 139 (199)
T PRK09456 64 EMALSLSYEQFAHGWQAV----FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM 139 (199)
T ss_pred HhCCCCCHHHHHHHHHHH----HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC
Confidence 344444445554444332 23589999999999999886 9999988877766655 478889999999999886
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.||+|+.|.++++++|++|++|++|||+..|+.+|+++|+.++++.++
T Consensus 140 --------------~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 140 --------------RKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred --------------CCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 799999999999999999999999999999999999999999998764
No 42
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.89 E-value=1.3e-22 Score=159.06 Aligned_cols=165 Identities=18% Similarity=0.215 Sum_probs=115.0
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh-----------hHHHHHHc-----CCC
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS-----------TLAGLRAL-----GYD 70 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-----~~~ 70 (256)
+|+||+||||+|+.+.+..++..+ ++.+|......+.... +. ..+. ....+... ...
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~-----~~~~g~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDT-----VEHFGGVSVTHADIDH-TK-LAGNANNDWQLTHRLVVDGLNSASSERVRDA 74 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHH-----HHHHcCCCCCHHHHHH-HH-HccCccCchHHHHHHHHHhhhcccchhccCC
Confidence 689999999999999988899884 4445421111111111 11 0000 00111110 012
Q ss_pred CChhhHhhhhhcCCC----C--------CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEe
Q 025190 71 IGADDYHGFVHGRLP----Y--------DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC 135 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~----~--------~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~ 135 (256)
...+.+...+.+.+. + ....+.++..++|+.|+++|+ ++||+....++..++.+|+..+|+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~ 154 (197)
T TIGR01548 75 PTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW 154 (197)
T ss_pred ccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe
Confidence 233333333322211 0 122455667999999999886 9999999999999999999999999999
Q ss_pred cccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 136 FETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
+++.. .||+|..+..+++++++++++|++|||+.+|+.+|+++
T Consensus 155 ~~~~~---------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 155 MEDCP---------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred ecCCC---------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 88765 49999999999999999999999999999999999875
No 43
>PLN02811 hydrolase
Probab=99.89 E-value=7.6e-23 Score=162.99 Aligned_cols=185 Identities=19% Similarity=0.223 Sum_probs=131.2
Q ss_pred cCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCC--CChhhHhhhhhcCC
Q 025190 12 LDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYD--IGADDYHGFVHGRL 84 (256)
Q Consensus 12 ~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~ 84 (256)
+||||+|+...+..+|.+ +.+++|.+.. .+. .....|... ......+.+ ...+.+........
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~-~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFD-WSL----KAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCC-HHH----HHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 699999999988888887 5567776532 111 111233221 112222332 12223222211111
Q ss_pred --CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHH-HHHhcCcccccceeEecc--cCCcccccCCCCCCCCCCC
Q 025190 85 --PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT-CLKRLEIADCFDQIICFE--TMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 85 --~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~-~l~~~gl~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~~ 156 (256)
......++||+.++|+.|+++|+ |+||+....... .++..++.++|+.+++++ +++. +
T Consensus 71 ~~~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~--------------~ 136 (220)
T PLN02811 71 QDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ--------------G 136 (220)
T ss_pred HHHHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------C
Confidence 02356889999999999999987 999988765544 444557888999999998 6665 7
Q ss_pred CCCHHHHHHHHHHcC---CCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchH
Q 025190 157 KPSMDAMKLALHVAN---VDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLP 220 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~---~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~ 220 (256)
||+|++|..++++++ +++++|++|||+..|+++|+++|++++++.++.. ...+++++.++.++.
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 999999999999996 9999999999999999999999999999976532 235788888887753
No 44
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.89 E-value=1.1e-22 Score=156.39 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=112.3
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCC---HHHHHHHHHHHHH-Hhh-----------hhHHHHHHcCCCC
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS---ETKASSLRVELFK-AYG-----------STLAGLRALGYDI 71 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~ 71 (256)
+|+||+||||+|+...+..++...+ ...+.. +.. ......+.. ..+ .........+...
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 74 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIA-----PEGGAFSDLWRA-KQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDA 74 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhh-----hhhhHHHHHHHH-HHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999987777777632 222210 010 000001110 011 1111223444444
Q ss_pred ChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 72 GADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
+.+.. ..+.+. +....++||+.++|+. -.|+||+....++..++++|+..+|+.++++++++.
T Consensus 75 ~~~~~-~~~~~~--~~~~~~~~g~~~~L~~----~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~---------- 137 (175)
T TIGR01493 75 EPKYG-ERLRDA--YKNLPPWPDSAAALAR----VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA---------- 137 (175)
T ss_pred CHHHH-HHHHHH--HhcCCCCCchHHHHHH----HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC----------
Confidence 44322 222221 2456799999999993 239999999999999999999999999999998776
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.||+|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 138 ----~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 ----YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred ----CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 79999999999999999999999999999999999864
No 45
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.88 E-value=6.2e-22 Score=149.12 Aligned_cols=151 Identities=21% Similarity=0.311 Sum_probs=111.0
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCCCC
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY 86 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (256)
+|+||+||||+|+...+..++..++ ++++.+..... ...|.....+.... ..+.+.. . + .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~g~~~~~~~~~~-----~~~~~~~-~-~-~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETL-----EEFGEDFQALK-------ALRGLAEELLYRIA-----TSFEELL-G-Y-D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHH-----HHhcccHHHHH-------HHHccChHHHHHHH-----HHHHHHh-C-c-c
Confidence 4899999999999888888888743 44454322111 11111111111100 0111111 1 1 2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.....+||+.++|+.|+++|+ ++||+....+...++++ +..+|+.++++++.+ .||+|+.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~---------------~Kp~~~~~ 124 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG---------------AKPEPEIF 124 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC---------------CCcCHHHH
Confidence 344567999999999998876 99999999999999998 888999999887765 69999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
.++++++++++ +|++|||+..|+.+|+++|
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 99999999999 9999999999999999987
No 46
>PLN02954 phosphoserine phosphatase
Probab=99.87 E-value=5.9e-21 Score=152.62 Aligned_cols=202 Identities=17% Similarity=0.214 Sum_probs=127.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHH-cC-CCCChhhHhhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA-LG-YDIGADDYHGFV 80 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 80 (256)
+++|+|+||+||||++++. +.. +.+.+|.+.... .....+....-.....+.. ++ .....+.+...+
T Consensus 10 ~~~k~viFDfDGTL~~~~~-----~~~-----~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG-----IDE-----LAEFCGAGEAVA-EWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFL 78 (224)
T ss_pred ccCCEEEEeCCCcccchHH-----HHH-----HHHHcCChHHHH-HHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4679999999999999853 232 556677642222 1111111110001111111 11 112334444444
Q ss_pred hcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc--cccceeEecccCCcccccCCCCCCCCCC
Q 025190 81 HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 81 ~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
.+ ....++||+.++|+.|+++|+ |+|++....++.+++.+|+. ++|...+..+..+ .+.++........
T Consensus 79 ~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~~~~~~~ 152 (224)
T PLN02954 79 EK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDENEPTSR 152 (224)
T ss_pred HH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccCCCcccC
Confidence 32 235689999999999999986 99999999999999999997 3564322221111 1112221222234
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----CCCCCCeeeCCcCchHHhH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----~~~~~~~~~~~~~el~~~l 223 (256)
.++||..+..++++++. +++++|||+.+|+.+++.+|+.++....+. ....+++++.++.+|.+++
T Consensus 153 ~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 67788999999998885 689999999999999999888866543221 1245899999998887654
No 47
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.86 E-value=4.5e-21 Score=148.20 Aligned_cols=126 Identities=20% Similarity=0.201 Sum_probs=97.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.+.++||+.++|+.|+++|+ ++||+.. +.+...++++|+ .|+.++.+.....
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~-------- 96 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE-------- 96 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC--------
Confidence 34789999999999999986 8998762 334556777776 3777765432110
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCC--CeeeCCcCchHHh
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEA--DYALENVNNLPQV 222 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~--~~~~~~~~el~~~ 222 (256)
+.....||+|.+|.+++++++++++++++|||+.+|+.+|+++|+.++++.++.. ...+ ++++.++.++.++
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 1112379999999999999999999999999999999999999999999976532 2345 8999999888876
Q ss_pred HH
Q 025190 223 VP 224 (256)
Q Consensus 223 l~ 224 (256)
+.
T Consensus 176 l~ 177 (181)
T PRK08942 176 LK 177 (181)
T ss_pred HH
Confidence 64
No 48
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.86 E-value=1.3e-20 Score=147.69 Aligned_cols=181 Identities=19% Similarity=0.270 Sum_probs=127.0
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhh----------h-----hHHHHH--
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG----------S-----TLAGLR-- 65 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-----~~~~~~-- 65 (256)
+++|+|+||++|||+...+.....+.. ..+.+|.+.... .....+...+. . .....+
T Consensus 5 ~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDDS-LIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCHH-HHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 789999999999999877777777776 677788764332 11111111110 0 000000
Q ss_pred ----Hc---CCCCChhhHhhhhhcCCCC---CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce
Q 025190 66 ----AL---GYDIGADDYHGFVHGRLPY---DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ 132 (256)
Q Consensus 66 ----~~---~~~~~~~~~~~~~~~~~~~---~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~ 132 (256)
.+ +.+...+.........+.. ....+.++..+++++||++|. ++||.+.. .+..+..+|+..+||.
T Consensus 79 lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~ 157 (237)
T KOG3085|consen 79 LVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDF 157 (237)
T ss_pred HHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhh
Confidence 00 1111111111111111111 355677888899999999996 56665544 5589999999999999
Q ss_pred eEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC
Q 025190 133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 133 i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~ 204 (256)
++.+...+. .||+|.+|..+++.++++|++|++|||+. ||+++|+++|+.++.|.+..
T Consensus 158 vv~S~e~g~--------------~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 158 VVESCEVGL--------------EKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred hhhhhhhcc--------------CCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 999999987 79999999999999999999999999999 89999999999999997554
No 49
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.86 E-value=1.3e-20 Score=147.32 Aligned_cols=194 Identities=21% Similarity=0.208 Sum_probs=145.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH----H-HHHHcCCCCChhhHh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL----A-GLRALGYDIGADDYH 77 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~ 77 (256)
..+.+++||+||||+|+...+..++++ .+.++|...+.... ....|... + .+.......+.+++.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~-----~~~mG~~~~eaa~~~~~~~~dp~s~ee~~ 77 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVK-----VKSMGKRTSEAARLFVKKLPDPVSREEFN 77 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHH-----HHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence 456789999999999999999999888 66777764332211 11223221 1 122445567777776
Q ss_pred hhhhcCC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcC-cccccceeEecccCCcccccCCCCCC
Q 025190 78 GFVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE-IADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 78 ~~~~~~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
...++.. ......++||+.++++.|+.+|+ ++|+.........+++++ +...|+.++.+++...
T Consensus 78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v---------- 147 (222)
T KOG2914|consen 78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEV---------- 147 (222)
T ss_pred HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccc----------
Confidence 6555422 25677899999999999999998 999999999999998887 6677877776443322
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNN 218 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~e 218 (256)
..+||+|++|..+++.+|.++ +.|++++|++..+++|+++||.+++++.... ...++.+++++.+
T Consensus 148 --~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 148 --KNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred --cCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 247999999999999999988 9999999999999999999999999987432 2446666655543
No 50
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.85 E-value=2.8e-20 Score=146.16 Aligned_cols=114 Identities=10% Similarity=0.048 Sum_probs=89.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ |+|++....++.+++.+|+..+|...+..++.+.. .. .+ ......++++..+
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--~p-~~-~~~~~~~~k~~~~ 152 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--QP-DG-IVRVTFDNKGEAV 152 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--ec-ce-eeEEccccHHHHH
Confidence 345799999999999999986 99999999999999999998888776665443320 00 00 0001124455789
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
..++++++++++++++|||+.+|+++|+.+|+.++..+.+.
T Consensus 153 ~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 153 ERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 99999999999999999999999999999999988776554
No 51
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.85 E-value=2.9e-20 Score=154.74 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=100.0
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-------eEecccCCcccccCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-------IICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-------i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
..++++||+.++++.|++.|+ |+|++....++.+++++|++..+.. .+++...+ ....+
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------~iv~~ 246 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------DIVDA 246 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------ccCCc
Confidence 346799999999999999986 9999999989999999998754432 22222111 12346
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
|||++.++.+++++|+++++|++|||+.||++|++.+|+++++...+..+..++++++ ..+|..+|
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHHHHH
Confidence 8999999999999999999999999999999999999999998555656678899886 55555544
No 52
>PRK06769 hypothetical protein; Validated
Probab=99.85 E-value=5.5e-21 Score=146.32 Aligned_cols=121 Identities=19% Similarity=0.177 Sum_probs=95.7
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChH--------HHHHHHHhcCcccccceeE-ecccCCcccccCCCCCCCCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN--------HAITCLKRLEIADCFDQII-CFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~--------~~~~~l~~~gl~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
+.++||+.++|++|+++|+ ++||.... .....++.+|+..+|.... +++.... .
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------~ 92 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------R 92 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC--------------C
Confidence 3689999999999999986 89987631 2344577777765544333 3333343 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------------CCCCCeeeCCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------------~~~~~~~~~~~~el~~~l 223 (256)
||+|..|.+++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.+|.++|
T Consensus 93 KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 93 KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999976531 245889999988887754
No 53
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.84 E-value=1.9e-20 Score=149.07 Aligned_cols=190 Identities=11% Similarity=0.102 Sum_probs=122.2
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH---hhhhHHHHHHcCCCCChhhHhhhhh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA---YGSTLAGLRALGYDIGADDYHGFVH 81 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (256)
.++|+||+||||++++..+ . +.+.++- .........+... ++.......+.......+++...+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~-~---------~~~~~~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 70 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNII-A---------IMKKFAP--PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLL 70 (219)
T ss_pred CcEEEEcCCCCCCcchhhH-H---------HHHHhCH--HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 3589999999999998643 1 1222321 2222222222221 1222222222211112244444432
Q ss_pred cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc--cc--ceeEecccCCcccccCCCCCCCCC
Q 025190 82 GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CF--DQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 82 ~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
....++||+.++|+.|+++|+ |+|++....++.+++++ +.. ++ +..++++....
T Consensus 71 -----~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------- 131 (219)
T PRK09552 71 -----ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------- 131 (219)
T ss_pred -----hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE-------------
Confidence 446899999999999999987 99999999999999998 643 22 23333333322
Q ss_pred CCCCCHHH----------HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC----CCCCCCCCeeeCCcCchH
Q 025190 155 LLKPSMDA----------MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK----TVNVGEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~----------~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~----~~~~~~~~~~~~~~~el~ 220 (256)
.||.|.. ...++++++.++.+|++||||.+|+++|+.+|+.++ ... ......+.+.++++.|+.
T Consensus 132 -~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f~ei~ 209 (219)
T PRK09552 132 -TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFETFHDVQ 209 (219)
T ss_pred -eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccCCHHHHH
Confidence 4555432 346888899999999999999999999999999554 111 113455888899999998
Q ss_pred HhHHHHH
Q 025190 221 QVVPEIW 227 (256)
Q Consensus 221 ~~l~~~~ 227 (256)
+.|+.++
T Consensus 210 ~~l~~~~ 216 (219)
T PRK09552 210 TELKHLL 216 (219)
T ss_pred HHHHHHh
Confidence 8887765
No 54
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.84 E-value=2e-20 Score=143.81 Aligned_cols=128 Identities=18% Similarity=0.192 Sum_probs=96.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.+.++||+.++|++|+++|+ ++||... ..+...++.+++. |+.++.+...... ..+.
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~---~~~~ 98 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG---VEEF 98 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc---cccc
Confidence 34689999999999999987 8999874 3445567777766 7776654221100 0000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCC-----CCCCCeeeCCcCchH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVN-----VGEADYALENVNNLP 220 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~-----~~~~~~~~~~~~el~ 220 (256)
++....+||+|.+|.++++++++++++++||||+.+|+++|+++|+.+ +++.++.. ...|+++++++.+|.
T Consensus 99 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 99 RQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred cCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 011224799999999999999999999999999999999999999998 78876642 245899999998875
No 55
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.82 E-value=1.2e-19 Score=143.08 Aligned_cols=195 Identities=14% Similarity=0.136 Sum_probs=123.7
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcC
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSL-RVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR 83 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (256)
+++|+||+||||++. .|.. +.+.+|.+....... ...+...++.....+.. ...+.+++...+
T Consensus 1 ~~~v~FD~DGTL~~~------~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVPE------IWIA-----FAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChhh------HHHH-----HHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHH---
Confidence 378999999999932 3432 445677653211000 00111122222222222 224555554443
Q ss_pred CCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 84 ~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++||+.++|+.|+++ + ++|++....++..++++|+..+|...+..++.+. ..+ ..+++|
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~--i~~--------~~~~~p 130 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM--ITG--------YDLRQP 130 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe--EEC--------cccccc
Confidence 4567899999999999987 5 9999999999999999999888866554332210 000 012222
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCe-eeCCcCchHHhHHHHHhcC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADY-ALENVNNLPQVVPEIWVSQ 230 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~-~~~~~~el~~~l~~~~~~~ 230 (256)
.....++++++..++++++||||.+|+.+++.+|+++. ++... ....+++ +++++.+|.+.+......+
T Consensus 131 ~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 202 (205)
T PRK13582 131 DGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIAEFPQFPAVHTYDELLAAIDKASARA 202 (205)
T ss_pred chHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhhc
Confidence 33455666666677899999999999999999998765 33332 1234554 8999999998887766543
No 56
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.82 E-value=3.8e-20 Score=138.08 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=81.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccc--cceeE-ecccCCcccccCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADC--FDQII-CFETMNPNLSKATR 148 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~--f~~i~-~~~~~~~~~~~~~~ 148 (256)
.++||+.++|+.|+++|+ ++||... ..+...++++|+... |..+. +++..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------- 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------- 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC-------
Confidence 689999999999999987 8999863 456778888888621 11111 1233332
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 149 PDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 149 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.||+|++|.++++++++++++|++|||+..|+++|+++|+++++++++
T Consensus 100 -------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 -------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred -------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 699999999999999999999999999999999999999999999764
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.82 E-value=1.4e-18 Score=137.11 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=90.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++||+.++|+.|+++|+ |+||++...++..+++. ++.++|+.++.. ..+ .||+|
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g---------------~KP~p 155 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG---------------LKTEA 155 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc---------------cCCCH
Confidence 455799999999999999986 99999999888888886 677788877742 222 69999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
+.|.++++++|++|+++++|||+..|+.+|+++|+.++++.++.+
T Consensus 156 ~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 156 QSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred HHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 999999999999999999999999999999999999999977653
No 58
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.81 E-value=1.2e-20 Score=142.99 Aligned_cols=104 Identities=19% Similarity=0.200 Sum_probs=91.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC-ChHHHHHHHHhcCcc---------cccceeEecccCCcccccCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLEIA---------DCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~-~~~~~~~~l~~~gl~---------~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
....++||+.++|+.|+++|+ ++||+ ....++..++.+++. ++|+.+++++....
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 456889999999999999986 99988 888889999999998 99999999887543
Q ss_pred CCCCCCHHHHHHHHHHc--CCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 154 VLLKPSMDAMKLALHVA--NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~--~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.||.+.+++.+.+.+ +++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 110 --~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 110 --AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred --HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 577777777777777 8999999999999999999999999999997764
No 59
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.80 E-value=7.5e-19 Score=128.83 Aligned_cols=95 Identities=22% Similarity=0.366 Sum_probs=82.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCC--------hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSD--------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
.++||+.++|+.|+++|+ ++||+. ...++..++++++. ++.++.+. .. .||
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~--------------~KP 86 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC--------------RKP 86 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC--------------CCC
Confidence 678999999999999986 999998 78889999999986 34444433 22 799
Q ss_pred CHHHHHHHHHHc-CCCCCcEEEEcC-CccccHHHHHcCCeEEEEcC
Q 025190 159 SMDAMKLALHVA-NVDPRHALFLDD-NIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~~~i~vGD-s~~Di~~a~~~G~~~v~v~~ 202 (256)
+|+.|.++++++ +++++++++||| +.+|+.+|+++|+.+|++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 87 KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 999999999999 599999999999 68999999999999999863
No 60
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.79 E-value=2.6e-19 Score=134.94 Aligned_cols=102 Identities=17% Similarity=0.306 Sum_probs=87.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---------------hHHHHHHHHhcCcccccceeE-e----cccCCcccc
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQII-C----FETMNPNLS 144 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---------------~~~~~~~l~~~gl~~~f~~i~-~----~~~~~~~~~ 144 (256)
.+.++||+.++|+.|+++|+ ++||.. ...+...++.+|+. |+.++ + +++...
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~--- 101 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC--- 101 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC---
Confidence 45889999999999999986 899963 45678889999996 77655 4 355544
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
.||++..+..+++++++++++++||||+.+|+++|+++|+.++++.+++.
T Consensus 102 -----------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 102 -----------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred -----------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhc
Confidence 79999999999999999999999999999999999999999999987753
No 61
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.78 E-value=5.5e-18 Score=132.62 Aligned_cols=192 Identities=11% Similarity=0.098 Sum_probs=119.4
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCCC
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP 85 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (256)
++++||+||||++. .|.. +....|.............+..+......+.+. ...+.+.+...+
T Consensus 2 ~la~FDlD~TLi~~------~w~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~----- 64 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIA-----FAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVI----- 64 (203)
T ss_pred eEEEEeCCcccHHH------HHHH-----HHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHH-----
Confidence 57999999999965 2443 455666532221110001111111111112221 145666665554
Q ss_pred CCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
..++++||+.++++.|++.+. ++|++....++.+++++|++.+|...+..++.+ .++|.. ...++.+..+
T Consensus 65 -~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g--~~tG~~-----~~~~~~K~~~ 136 (203)
T TIGR02137 65 -ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD--RVVGYQ-----LRQKDPKRQS 136 (203)
T ss_pred -HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--eeECee-----ecCcchHHHH
Confidence 345789999999999998754 999999999999999999988876322221101 011110 1134444444
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC-CCCC-eeeCCcCchHHhHHH
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV-GEAD-YALENVNNLPQVVPE 225 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~-~~~~-~~~~~~~el~~~l~~ 225 (256)
...+++.+. ++++||||.||+.+++.+|+++++...+... ..++ -++.++.||.+.+..
T Consensus 137 l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 137 VIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred HHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 444455553 7999999999999999999999999876532 2333 456777777776644
No 62
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.77 E-value=7.1e-18 Score=134.20 Aligned_cols=97 Identities=16% Similarity=0.164 Sum_probs=81.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC----ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS----DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....+.+++.++|+.|+++|+ +|||. ....++.+++++|+..+|+.++++++... .||+
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~--------------~Kp~ 176 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ--------------YQYT 176 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC--------------CCCC
Confidence 455788889999999999986 89998 56678888999999999999988877653 5776
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+. .+++++++ ++||||+.+|+.+|+++|+.++.+.++.
T Consensus 177 ~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 177 KT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAS 214 (237)
T ss_pred HH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence 64 35667776 7999999999999999999999997654
No 63
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.75 E-value=1.6e-17 Score=130.55 Aligned_cols=186 Identities=15% Similarity=0.079 Sum_probs=128.3
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH--HhhhhHHHHHHcCCCCChhhHhhh
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFK--AYGSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
.++.++++||+||||++.. .+.. .....|....-.......... .+..............+.+.+...
T Consensus 2 ~~~~~L~vFD~D~TLi~~~-----~~~~-----~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 2 RRMKKLAVFDLDGTLINAE-----LIDE-----LARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CCccceEEEecccchhhHH-----HHHH-----HHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4567899999999999921 2221 334445432211111111100 112222222333345566666665
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
..+. ..++||+.++++.+++.|. ++|++....++++.+.+|++..+...+..++ + .|+| ..-...+.+
T Consensus 72 ~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G--~ltG-~v~g~~~~~ 142 (212)
T COG0560 72 REEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-G--KLTG-RVVGPICDG 142 (212)
T ss_pred HHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-C--EEec-eeeeeecCc
Confidence 5432 7899999999999999986 9999999999999999999988877666655 3 1222 122334456
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
+-|...+..+++++|+++++++++|||.||+.|.+.+|.+.+..+.+...
T Consensus 143 ~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~ 192 (212)
T COG0560 143 EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLR 192 (212)
T ss_pred chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHH
Confidence 67789999999999999999999999999999999999999887766433
No 64
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.75 E-value=3.8e-17 Score=126.96 Aligned_cols=107 Identities=11% Similarity=0.066 Sum_probs=81.2
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc--ccccCCCCC----CCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP--NLSKATRPD----EFPVLLKP 158 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--~~~~~~~~~----~~~~~~Kp 158 (256)
..+++||+.++++.|+++|+ ++|++....++..++++++.++|+.+++++.... +.+.++... +....+.+
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 36899999999999999885 9999999999999999999999999987654221 011110000 11223445
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~ 197 (256)
|+..++++.+++ ++++++|||+.+|+++|+.+++-+
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 678888888765 789999999999999999996544
No 65
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.74 E-value=2.2e-17 Score=131.01 Aligned_cols=124 Identities=10% Similarity=0.102 Sum_probs=89.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc---ceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
..+++||+.++++.|+++|+ |+|++....++.+++.++....+ +.++.++.... .||.|.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------------~~p~~~ 133 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------------DWPHPC 133 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------eCCCCC
Confidence 46899999999999999886 99999999999999987543333 22333222221 345444
Q ss_pred HH----------HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-----CCCCCCCeeeCCcCchHHhHHHH
Q 025190 162 AM----------KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-----VNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 162 ~~----------~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-----~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
.+ ..++++++..+++++||||+.+|+++|+.+|+ +++... .....+...+.++.|+.+.|+++
T Consensus 134 ~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 134 DGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred ccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 32 35666777788899999999999999999998 333321 23344777788888888888765
Q ss_pred H
Q 025190 227 W 227 (256)
Q Consensus 227 ~ 227 (256)
+
T Consensus 212 ~ 212 (214)
T TIGR03333 212 K 212 (214)
T ss_pred h
Confidence 4
No 66
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.74 E-value=1.2e-17 Score=122.61 Aligned_cols=114 Identities=24% Similarity=0.319 Sum_probs=93.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc--cCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~Kp~~~ 161 (256)
....++|++.++|+.|+++|+ ++|++....++..++.+++..+++.+++.+......- ...........+||++.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 567899999999999999875 9999999999999999999888888887766543100 00011122333499999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.+..+++.++.+++++++|||+.+|+++++.+|+.++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999999999999999999999999999998874
No 67
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.74 E-value=5.8e-18 Score=128.40 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=79.1
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChH------------HHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRN------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++||+.++|+.|+++|+ |+||.... .++.+++++|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 68999999999999987 89997653 567889999985 356666554333
Q ss_pred CCCCHHHHHHHHHHcC--CCCCcEEEEcCCc--------cccHHHHHcCCeEEE
Q 025190 156 LKPSMDAMKLALHVAN--VDPRHALFLDDNI--------KNVTAGKALGLRTVL 199 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~--~~~~~~i~vGDs~--------~Di~~a~~~G~~~v~ 199 (256)
.||+|..+.+++++++ +++++++||||+. +|+++|+++|+.+++
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 7999999999999999 9999999999996 699999999999875
No 68
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.71 E-value=1.8e-16 Score=121.93 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=80.7
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
..+.++||+.++++.++++|+ ++|++....++..++++|+..++...+..++.+ .+.+.........+..|+..+
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g--~~~g~~~~~~~~~~~~K~~~l 147 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG--LLTGPIEGQVNPEGECKGKVL 147 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC--EEeCccCCcccCCcchHHHHH
Confidence 345689999999999999986 999999999999999999988776655543322 111111011223456677899
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
..++++++++++++++||||.+|+++++.+
T Consensus 148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 148 KELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999999999999999999999999998764
No 69
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.70 E-value=4.4e-16 Score=122.45 Aligned_cols=129 Identities=13% Similarity=0.054 Sum_probs=94.2
Q ss_pred CCChhhHhhhhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEec-ccCCcccc
Q 025190 70 DIGADDYHGFVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLS 144 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~-~~~~~~~~ 144 (256)
..+.+++.....+... .-...++||+.++++.++++|+ ++|++....++.+++++|++.+|...+.. ++ + .+
T Consensus 66 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g--~~ 142 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-G--IY 142 (202)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-C--EE
Confidence 4566665554443221 1134789999999999999885 99999999999999999998777552221 21 1 11
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
.|.- ....+.+++|...++.++++.++++++++++|||.+|+++++.+|..++..+.
T Consensus 143 ~g~~-~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 143 TGNI-DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eCCc-cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 1111 11234567888889999999999999999999999999999999988775543
No 70
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.69 E-value=1.1e-16 Score=130.16 Aligned_cols=122 Identities=15% Similarity=0.149 Sum_probs=97.7
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
.++++.+.++.|+..+. ++||.+.......+..+|...+|+.+..+.... ....+||+|.+|..++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~~~ 189 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTK-----------ATVVGKPSKTFFLEAL 189 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCC-----------ceeecCCCHHHHHHHH
Confidence 46888899999987664 777877776666667778888887766543322 1223799999999999
Q ss_pred HHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC--------CCCCCCeeeCCcCchHHhH
Q 025190 168 HVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV--------NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 168 ~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~--------~~~~~~~~~~~~~el~~~l 223 (256)
++++++++++++|||+. +|+.+|+++|+.++++.++. ....|+++++++.+|.++|
T Consensus 190 ~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 190 RATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999999999999997 89999999999999997663 1246899999998887765
No 71
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.69 E-value=5.6e-17 Score=133.66 Aligned_cols=119 Identities=22% Similarity=0.233 Sum_probs=89.1
Q ss_pred CCChhHHHHHHhhhcCcE--EEecCChHHH-HHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI--IFTNSDRNHA-ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~--ivs~~~~~~~-~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.-++++.+.++.|+++|. ++||.+.... ...+...+...+|+.+...... +....+||+|.++..+
T Consensus 143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~-----------~~~~~gKP~p~~~~~~ 211 (279)
T TIGR01452 143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGR-----------QPLVVGKPSPYMFECI 211 (279)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCC-----------ceeccCCCCHHHHHHH
Confidence 347899999999998775 8888765433 1223345665666654432111 1122479999999999
Q ss_pred HHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------------CCCCCeeeCCcCch
Q 025190 167 LHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------------VGEADYALENVNNL 219 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------------~~~~~~~~~~~~el 219 (256)
++++++++++++||||+. +||.+|+++|+.+++|.++.. ...|+++++++.+|
T Consensus 212 ~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 212 TENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999999999999999996 999999999999999987632 13699999998764
No 72
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.68 E-value=3.5e-16 Score=131.11 Aligned_cols=100 Identities=16% Similarity=0.297 Sum_probs=83.7
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC---------------ChHHHHHHHHhcCcccccceeEec-----ccCCccc
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICF-----ETMNPNL 143 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~---------------~~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~ 143 (256)
....++||+.++|++|+++|+ |+||. ....+..+++.+++. |+.++.+ ++..
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~--- 101 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCS--- 101 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCC---
Confidence 446899999999999999986 99994 244566678888884 6665543 3333
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
.+||+|.++..+++++++++++++||||+.+|+++|+++|+++++++.
T Consensus 102 -----------~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 102 -----------CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred -----------CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 379999999999999999999999999999999999999999999954
No 73
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.67 E-value=7.4e-17 Score=121.12 Aligned_cols=107 Identities=17% Similarity=0.225 Sum_probs=89.2
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
.+++|+++|+ |+||.....++..++++|+..+|+. .||++..+..+++++++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-----------------------~~~k~~~~~~~~~~~~~~~ 92 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-----------------------QSNKLIAFSDILEKLALAP 92 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-----------------------ccchHHHHHHHHHHcCCCH
Confidence 7888998886 9999999999999999998877642 3778899999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
++|++|||+.+|+.+++.+|++ +.+.+. .....+++++.+... +.++++.++.
T Consensus 93 ~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 93 ENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLL 150 (154)
T ss_pred HHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999998 444433 334668999987765 7777777664
No 74
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.65 E-value=1.8e-15 Score=120.41 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=83.3
Q ss_pred hhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCC----hHHHHHHHHhcCc--ccccceeEecccCCccc
Q 025190 73 ADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSD----RNHAITCLKRLEI--ADCFDQIICFETMNPNL 143 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~----~~~~~~~l~~~gl--~~~f~~i~~~~~~~~~~ 143 (256)
.+.++..+.+.. .....|+||+.++|+.|+++|+ +|||.. ....+.+++.+|+ .++|+.+++++..
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---- 172 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---- 172 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC----
Confidence 445555555432 3457899999999999999986 899963 4466777778999 7889888887643
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.||++.. .++++++ +++|||+.+|+.+|+++|+.++.+.++.
T Consensus 173 ------------~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 173 ------------GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred ------------CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 4666543 5566776 8999999999999999999999997764
No 75
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.65 E-value=2.7e-15 Score=114.47 Aligned_cols=97 Identities=23% Similarity=0.255 Sum_probs=81.6
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCC-hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|+.|+++|+ ++||+. ...++.+++.+++..++ +. .||+|.+
T Consensus 40 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~--------------~KP~p~~ 96 (170)
T TIGR01668 40 DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA--------------VKPPGCA 96 (170)
T ss_pred CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC--------------CCCChHH
Confidence 445789999999999999875 999988 56667777777764221 11 6999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC
Q 025190 163 MKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
|..++++++++++++++|||+. .|+.+|+++|+.++++.++...
T Consensus 97 ~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 97 FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 9999999999999999999998 7999999999999999877543
No 76
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.3e-15 Score=122.62 Aligned_cols=76 Identities=28% Similarity=0.374 Sum_probs=66.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCchH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNLP 220 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el~ 220 (256)
......+||.+.+++.++++++.+++++++|||++ +||.+|+++||.+++|..+.. ...|++++.++.++.
T Consensus 183 ~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~ 262 (269)
T COG0647 183 REPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELI 262 (269)
T ss_pred CcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHH
Confidence 34468899999999999999999999999999999 899999999999999987753 356899999988887
Q ss_pred HhHHH
Q 025190 221 QVVPE 225 (256)
Q Consensus 221 ~~l~~ 225 (256)
..++.
T Consensus 263 ~~~~~ 267 (269)
T COG0647 263 TALKE 267 (269)
T ss_pred hhhhc
Confidence 66543
No 77
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.63 E-value=1.5e-15 Score=110.33 Aligned_cols=85 Identities=21% Similarity=0.253 Sum_probs=75.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecC-ChHHHHHHHHhcC-------cccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLE-------IADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~-~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
.++||+.++|+.|+++|+ ++||+ ....+...++..+ +.++|+.+++++ .+|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~------------------~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY------------------WLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC------------------CCc
Confidence 688999999999999987 89999 7888888899988 788888887753 367
Q ss_pred CHHHHHHHHHHcC--CCCCcEEEEcCCccccHHHHH
Q 025190 159 SMDAMKLALHVAN--VDPRHALFLDDNIKNVTAGKA 192 (256)
Q Consensus 159 ~~~~~~~~~~~~~--~~~~~~i~vGDs~~Di~~a~~ 192 (256)
+|..|..+++++| ++|++|++|||+..|+...++
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 8899999999999 999999999999999877654
No 78
>PLN02645 phosphoglycolate phosphatase
Probab=99.63 E-value=1e-16 Score=133.97 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=85.8
Q ss_pred HHHhhhc-CcE--EEecCChHH-HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 025190 98 LLCSITQ-RKI--IFTNSDRNH-AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173 (256)
Q Consensus 98 ~l~~l~~-~~~--ivs~~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 173 (256)
....|+. .|. ++||.+... ....+...|...+|+.+..+.... ....+||+|.+|..++++++++
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~a~~~~~~~ 246 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTERE-----------PLVVGKPSTFMMDYLANKFGIE 246 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCC-----------cccCCCChHHHHHHHHHHcCCC
Confidence 3445543 354 777776543 233345566666777666554432 1234799999999999999999
Q ss_pred CCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC----------CCCCCeeeCCcCchHHhHH
Q 025190 174 PRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN----------VGEADYALENVNNLPQVVP 224 (256)
Q Consensus 174 ~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~----------~~~~~~~~~~~~el~~~l~ 224 (256)
+++++||||++ +||.+|+++|+++++|.++.. ...|+++++++.+|.++++
T Consensus 247 ~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 247 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99999999998 999999999999999976531 1468999999999877654
No 79
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.62 E-value=2.3e-15 Score=125.57 Aligned_cols=110 Identities=16% Similarity=0.084 Sum_probs=92.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++++.|+++|+ ++|+......+..++++++.. +|+.+++.+.... |-. .....||+|..
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~--~~~-----~~~~~kp~p~~ 256 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH--FQR-----EQGDKRPDDVV 256 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh--hcc-----cCCCCCCcHHH
Confidence 344789999999999999986 999999999999999999987 8999888773110 000 00126999999
Q ss_pred HHHHHHHcCC-CCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 163 MKLALHVANV-DPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 163 ~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+..++++++. ++++|++|||+.+|+.+|+++|+.+++|.++
T Consensus 257 ~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 257 KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 9999999988 6799999999999999999999999999765
No 80
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.62 E-value=1.9e-16 Score=119.84 Aligned_cols=107 Identities=15% Similarity=0.188 Sum_probs=85.4
Q ss_pred HHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 025190 99 LCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175 (256)
Q Consensus 99 l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 175 (256)
+..|+++|+ ++|+.....++..++++|+..+|+. .||+|..+..++++++++++
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-----------------------~kpkp~~~~~~~~~l~~~~~ 99 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-----------------------IKKKTEPYAQMLEEMNISDA 99 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-----------------------CCCCHHHHHHHHHHcCcCHH
Confidence 445555665 9999999999999999999877762 37888999999999999999
Q ss_pred cEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 176 HALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 176 ~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
++++|||+.+|+.+++.+|++.++.+.. ..+..++++..+-.+ +.++++.++.
T Consensus 100 ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 100 EVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred HEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999887643 344567887754333 3455555553
No 81
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.60 E-value=2.4e-15 Score=119.12 Aligned_cols=88 Identities=23% Similarity=0.287 Sum_probs=75.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..+++|++.++|+.|++.|+ ++|+.....+..+.+.+|+. +.++.+... +||.+.++.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~----------------~kP~~k~~~ 185 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI----------------GKPEPKIFL 185 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE----------------TTTHHHHHH
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc----------------ccccchhHH
Confidence 34789999999999999997 99999999999999999994 333332211 399999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
.+++++++++++|+||||+.||+.+++++|
T Consensus 186 ~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 186 RIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999999999999987
No 82
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.60 E-value=7e-14 Score=110.63 Aligned_cols=175 Identities=21% Similarity=0.243 Sum_probs=114.0
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH-----HHHHhhhhHHHHHHcCCCCChhhHhhhhh
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVE-----LFKAYGSTLAGLRALGYDIGADDYHGFVH 81 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (256)
+|+||+|+||+|.+.... +.+.++..... .++... +...+......+... ..+++++.+.+
T Consensus 2 LvvfDFD~TIvd~dsd~~----------v~~~l~~~~~~-~~l~~~~~~~~wt~~m~~vl~~L~~~--gvt~~~I~~~l- 67 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDW----------VIELLPPEELP-EELRESYPKGGWTEYMDRVLQLLHEQ--GVTPEDIRDAL- 67 (234)
T ss_pred EEEEeCCCCccCCccHHH----------HHHhcCCcccH-HHHHHhccccchHHHHHHHHHHHHHc--CCCHHHHHHHH-
Confidence 589999999999876322 22334332110 111111 111122222223222 36777777764
Q ss_pred cCCCCCCCCCChhHHHHHHhhh--cCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc-------ccccCCCC
Q 025190 82 GRLPYDLIKPDPQLRNLLCSIT--QRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP-------NLSKATRP 149 (256)
Q Consensus 82 ~~~~~~~~~~~pg~~~~l~~l~--~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~-------~~~~~~~~ 149 (256)
..+++.||+.++++.+. +.++ |+|++..-+++.+|++.|+...|+.|++....-. .-|-..+|
T Consensus 68 -----~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C 142 (234)
T PF06888_consen 68 -----RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGC 142 (234)
T ss_pred -----HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCC
Confidence 67899999999999994 4565 9999999999999999999999999888642211 01111333
Q ss_pred CC-CCCCCCCCHHHHHHHHHH---cCCCCCcEEEEcCCccccHHHHHcCCe-EEEEcC
Q 025190 150 DE-FPVLLKPSMDAMKLALHV---ANVDPRHALFLDDNIKNVTAGKALGLR-TVLVGK 202 (256)
Q Consensus 150 ~~-~~~~~Kp~~~~~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~G~~-~v~v~~ 202 (256)
+. ....+| ...++++++. .|++..+++||||+.||+.++.+++-. .|+...
T Consensus 143 ~~C~~NmCK--~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 143 SLCPPNMCK--GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred CcCCCccch--HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCC
Confidence 31 122344 4778888877 478889999999999999999998765 344433
No 83
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.59 E-value=6.3e-15 Score=119.36 Aligned_cols=66 Identities=21% Similarity=0.281 Sum_probs=57.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC------C--CCCCeeeCCcCch
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN------V--GEADYALENVNNL 219 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~------~--~~~~~~~~~~~el 219 (256)
..+||+|.+|+.+++.++++++++++|||+. +||.+|+++|++++++.++.. . ..|+++++++.++
T Consensus 175 ~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 175 YIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 3489999999999999999999999999997 899999999999999987642 1 4588888887653
No 84
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.57 E-value=8.1e-16 Score=114.75 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=82.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|+.|++ ++ |+|++....++.+++++++.. +|+.+++++++.. .||+
T Consensus 42 ~~v~l~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~--------------~KP~--- 103 (148)
T smart00577 42 VYVKKRPGVDEFLKRASE-LFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF--------------VKGK--- 103 (148)
T ss_pred EEEEECCCHHHHHHHHHh-ccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc--------------cCCe---
Confidence 345789999999999985 44 999999999999999999865 5699999988875 6885
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
|.+++++++++|++|++|||+.+|+.+++++|+.+-
T Consensus 104 ~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 889999999999999999999999999999988764
No 85
>PRK10444 UMP phosphatase; Provisional
Probab=99.55 E-value=3.1e-14 Score=114.96 Aligned_cols=68 Identities=24% Similarity=0.290 Sum_probs=60.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCch
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNL 219 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el 219 (256)
....+||+|.++..++++++++++++++|||+. +|+.+|+++|+.++++.++.. +..|+++++++.++
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 344589999999999999999999999999998 899999999999999987642 25799999998876
No 86
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.54 E-value=1.1e-14 Score=112.41 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=79.9
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
.++.|+++|+ ++|+.....+...++.+|+..+|+ + .++++..+..+++++|+++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g---------------~~~k~~~l~~~~~~~gl~~ 112 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G---------------QSNKLIAFSDLLEKLAIAP 112 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------CCcHHHHHHHHHHHhCCCH
Confidence 4455555665 999999999999999999876664 1 4667799999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC------CcCchHHhH
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE------NVNNLPQVV 223 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~------~~~el~~~l 223 (256)
++++||||+.+|+.+++.+|+.++ +++.. ....+++++. .+.++.+.|
T Consensus 113 ~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 113 EQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 999999999999999999999955 54332 2356888886 455555443
No 87
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.53 E-value=2.8e-13 Score=101.18 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=84.1
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc--ccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
...+++.||+++++..|+++|. ++|++....+..+...+|++- .+...+--+..+ -|.|+..++++..+.-|+
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G--k~~gfd~~~ptsdsggKa 161 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG--KYLGFDTNEPTSDSGGKA 161 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC--cccccccCCccccCCccH
Confidence 3577899999999999999986 999999999999999999974 343333333333 356677778888888888
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKA 192 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 192 (256)
+.+..+.+ +.+...++||||+.+|+++...
T Consensus 162 ~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 162 EVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 99998888 8888999999999999998776
No 88
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.49 E-value=1.4e-13 Score=90.38 Aligned_cols=65 Identities=29% Similarity=0.445 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCch
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDN-IKNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNL 219 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el 219 (256)
.+||+|.++..++++++++++++++|||+ .+||.+|+++|+.+++|..+.. ...|+++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 37999999999999999999999999999 7999999999999999987642 25899999999875
No 89
>PRK11590 hypothetical protein; Provisional
Probab=99.49 E-value=6.2e-13 Score=105.18 Aligned_cols=180 Identities=12% Similarity=0.026 Sum_probs=102.7
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH------------HHHcCCCC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG------------LRALGYDI 71 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 71 (256)
..|+++||+||||++.+ +...+.. ++.++++++......... .+|..... +.......
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~----~~~~~~g~~~~~~~~~~~----~ig~~l~~~~~~~~~~~~~~~~~~~~g~ 74 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLR----YLLRRQPLNLLLVLPLLP----VIGLGLLVKGRAARWPMSLLLWGCTFGH 74 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHH----HHHHhcchhhHHHhHHHH----HhccCcccchhhhhhhHHHHHHHHHcCC
Confidence 56899999999999443 4444444 233566655333222211 11211100 11111122
Q ss_pred ChhhHh---hhhhcCCCCCCCCCChhHHHHH-HhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc
Q 025190 72 GADDYH---GFVHGRLPYDLIKPDPQLRNLL-CSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS 144 (256)
Q Consensus 72 ~~~~~~---~~~~~~~~~~~~~~~pg~~~~l-~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 144 (256)
+.+++. +.+.+.+ .....++||+.+.| +.+++.|+ ++|++....++.+++.+|+.. .+.+++++-.. .|
T Consensus 75 ~~~~~~~~~~~f~~~~-~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~--~~ 150 (211)
T PRK11590 75 SEARLQALEADFVRWF-RDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR--RY 150 (211)
T ss_pred CHHHHHHHHHHHHHHH-HHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE--EE
Confidence 333332 2222212 12257799999999 57887774 999999999999999999632 33344443111 12
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
+| ......+++.-|...++.. ++.+...+.+.|||.+|+.+..-+|-+.+..+
T Consensus 151 tg-~~~g~~c~g~~K~~~l~~~---~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 151 GG-WVLTLRCLGHEKVAQLERK---IGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred cc-EECCccCCChHHHHHHHHH---hCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 22 1122233344444444433 46677788999999999999999997766443
No 90
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.47 E-value=7.2e-13 Score=100.16 Aligned_cols=121 Identities=18% Similarity=0.261 Sum_probs=88.0
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecC---------------ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~---------------~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
+...||+.+.+..|++.|+ ++||- ....+...++..|. -|+.++..-....
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~--------- 98 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPE--------- 98 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC---------
Confidence 3566788888888888886 78871 23334455666665 3676665433221
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----CCCCCCeeeCCcCchH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----NVGEADYALENVNNLP 220 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----~~~~~~~~~~~~~el~ 220 (256)
+.-..+||++.++..+++++++++++.++|||+.+|+++|.++|++.+.+.++. .+...+++..++.++.
T Consensus 99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 224568999999999999999999999999999999999999999977765442 1224567777766665
No 91
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.47 E-value=1.2e-13 Score=113.57 Aligned_cols=71 Identities=10% Similarity=0.135 Sum_probs=57.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+-.|+.+++++++.+|++++++++|||+.||++|++.+|+.+++-+.. ..+..|++++.+..+ +.++|+.+
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 455779999999999999999999999999999999999977665432 234568999887766 66666654
No 92
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.46 E-value=1.2e-13 Score=110.79 Aligned_cols=72 Identities=13% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
.+..|+.+++++++.+|++++++++|||+.||++|++.+|+.+++-+.. ..+..++++..+..+ +.+.|+.+
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence 4677889999999999999999999999999999999999988776543 344568888877665 55666544
No 93
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.46 E-value=2.7e-13 Score=113.82 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=80.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh----cCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR----LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~----~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
.++||+.++|+.|+++|+ ++|++....+...+++ +++.++|+.+..+ .||+|..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-------------------~~pk~~~ 91 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-------------------WGPKSES 91 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-------------------cCchHHH
Confidence 358999999999999997 8999999999999999 8898899887553 5899999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCe
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+..+++++|+.+++++||||+..|+..++.++..
T Consensus 92 i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 92 LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999997654
No 94
>PRK08238 hypothetical protein; Validated
Probab=99.42 E-value=4.4e-12 Score=111.08 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=75.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
...+++||+.+++++++++|. ++|++....++.+++++|+ ||.++++++... .||++..
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~--------------~kg~~K~- 130 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN--------------LKGAAKA- 130 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc--------------cCCchHH-
Confidence 445678999999999999986 9999999999999999997 899999887543 5554432
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
..+.+.++ .++++++||+.+|+++++.+| ..+.|+.+
T Consensus 131 ~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 131 AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCC
Confidence 23445554 355899999999999999999 55566543
No 95
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.41 E-value=2e-13 Score=109.14 Aligned_cols=74 Identities=27% Similarity=0.379 Sum_probs=62.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC------------CCCCCeeeCCc
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN------------VGEADYALENV 216 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~------------~~~~~~~~~~~ 216 (256)
-.+...+||.+.++..++++++++|++++||||+. +||..++++|++++++..+.. ...|||.++++
T Consensus 217 R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l 296 (306)
T KOG2882|consen 217 RQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSL 296 (306)
T ss_pred CCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhH
Confidence 35688999999999999999999999999999999 799999999999999976542 23488888777
Q ss_pred CchHHhH
Q 025190 217 NNLPQVV 223 (256)
Q Consensus 217 ~el~~~l 223 (256)
.++...+
T Consensus 297 ~d~~~~~ 303 (306)
T KOG2882|consen 297 GDLLPLL 303 (306)
T ss_pred HHHhhhc
Confidence 6665443
No 96
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.41 E-value=2.5e-12 Score=108.01 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=58.8
Q ss_pred CCCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC-------CCCCCCe
Q 025190 153 PVLLKPSMDAMKLALHVA--------NV-----DPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV-------NVGEADY 211 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~--------~~-----~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~-------~~~~~~~ 211 (256)
...+||++.+|+.+++.+ ++ ++++++||||++ +||.+|+++|+.+++|..+. ....|++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 567999999999988877 43 457999999999 99999999999999998752 1235899
Q ss_pred eeCCcCchHHhH
Q 025190 212 ALENVNNLPQVV 223 (256)
Q Consensus 212 ~~~~~~el~~~l 223 (256)
+++++.|+..+|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999998887654
No 97
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.39 E-value=1.2e-11 Score=100.20 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=82.6
Q ss_pred CCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEe------cccC
Q 025190 69 YDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC------FETM 139 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~------~~~~ 139 (256)
..++.+.+...+.+ ..+.+.||+.+|++.|+++|+ |+|++....++.+++++|+...+..+++ .+..
T Consensus 104 ~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGv 179 (277)
T TIGR01544 104 QAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGV 179 (277)
T ss_pred CCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCe
Confidence 34566666666532 578999999999999999987 9999999999999999998765655532 2222
Q ss_pred CcccccCCCCCCCCCCCCCCH-HHHHHHHHHcC--CCCCcEEEEcCCccccHHHHHc
Q 025190 140 NPNLSKATRPDEFPVLLKPSM-DAMKLALHVAN--VDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~~Kp~~-~~~~~~~~~~~--~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.. |. .+++.+.--|. ..+...++.++ .++++||+||||.+|+.||..+
T Consensus 180 lt----G~--~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 180 LK----GF--KGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred Ee----CC--CCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 11 10 01111111122 55667888888 8999999999999999998877
No 98
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.38 E-value=2.5e-12 Score=94.15 Aligned_cols=96 Identities=26% Similarity=0.449 Sum_probs=85.8
Q ss_pred CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 85 PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 85 ~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
.+.....-|.+.+.+.+++..|+ ++||+....+....+.+|+ +.++.+ .||-+.
T Consensus 41 ~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi~~A-------------------~KP~~~ 97 (175)
T COG2179 41 PWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFIYRA-------------------KKPFGR 97 (175)
T ss_pred cccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----ceeecc-------------------cCccHH
Confidence 35667888999999999999987 9999999999999999996 444442 799999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~ 203 (256)
.|.++++++++++++|++|||.. .|+.+++.+|+.++.|..-
T Consensus 98 ~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl 140 (175)
T COG2179 98 AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPL 140 (175)
T ss_pred HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEe
Confidence 99999999999999999999999 8999999999999999543
No 99
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.36 E-value=2e-11 Score=93.27 Aligned_cols=208 Identities=12% Similarity=0.130 Sum_probs=126.6
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHH---HHHHHHHHHHHH-hhhhHHHHHHcCCCCChhhHhhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSET---KASSLRVELFKA-YGSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
+..+++||+|-||+|.++..+ ..+.++.... ....+....+.. ++.....+.+ ....++++...
T Consensus 12 ~ril~~FDFD~TIid~dSD~w----------Vv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lhe--qgv~~~~ik~~ 79 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNW----------VVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHE--QGVRIAEIKQV 79 (256)
T ss_pred CcEEEEEecCceeecCCcchH----------HHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHH--cCCCHHHHHHH
Confidence 445789999999998876432 1122332211 111111111111 2222222222 23566666666
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE----EEecCChHHHHHHHHhcCcccccceeEecccCCc--------ccccCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP--------NLSKAT 147 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~----ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------~~~~~~ 147 (256)
+ ..++..||+.++++.+++.|. |||+...-+++.+|+++|+.+.|+.|++.-.... .+-..+
T Consensus 80 ~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~h 153 (256)
T KOG3120|consen 80 L------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQH 153 (256)
T ss_pred H------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCC
Confidence 4 678899999999999999884 9999999999999999999999998887543211 000112
Q ss_pred CCC-CCCCCCCCCHHHHHHHHHH---cCCCCCcEEEEcCCccccHHHHHcCCeEEEE-cCCCC-----CC------CCCe
Q 025190 148 RPD-EFPVLLKPSMDAMKLALHV---ANVDPRHALFLDDNIKNVTAGKALGLRTVLV-GKTVN-----VG------EADY 211 (256)
Q Consensus 148 ~~~-~~~~~~Kp~~~~~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v-~~~~~-----~~------~~~~ 211 (256)
.|+ .+...+|- ..+.++... -|++.++.+||||+.||+.+.....-.-+.. ..+.. .. ..-.
T Consensus 154 sC~~CPsNmCKg--~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~ 231 (256)
T KOG3120|consen 154 SCNLCPSNMCKG--LVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVL 231 (256)
T ss_pred ccCcCchhhhhh--HHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEE
Confidence 222 22233333 455555444 3788889999999999999888876554444 33321 11 1334
Q ss_pred eeCCcCchHHhHHHHHhcCC
Q 025190 212 ALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 212 ~~~~~~el~~~l~~~~~~~~ 231 (256)
...+=.|+...|.+++....
T Consensus 232 ~W~sg~d~~~~L~~lik~~~ 251 (256)
T KOG3120|consen 232 EWSSGEDLERILQQLIKTIQ 251 (256)
T ss_pred ecccHHHHHHHHHHHHHHhh
Confidence 56666677777776665444
No 100
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.36 E-value=3.5e-12 Score=112.22 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=76.1
Q ss_pred CChhHHHHHHhhhcCcE---EEecCCh------------HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDR------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++||+.+.|+.|++.|+ |+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 57999999999999987 8898655 4577889999985 887777665543
Q ss_pred CCCCHHHHHHHHHHcC----CCCCcEEEEcCCccccHHHHHcCCe
Q 025190 156 LKPSMDAMKLALHVAN----VDPRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~----~~~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+||+|.++.+++++++ +++++++||||+..|+.+++.+|-+
T Consensus 262 RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 262 RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 7999999999999985 8999999999999999888777753
No 101
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.35 E-value=2.4e-11 Score=101.45 Aligned_cols=114 Identities=23% Similarity=0.275 Sum_probs=85.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc-C-------cccccceeEecccCCcccccCCCC-------C
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-E-------IADCFDQIICFETMNPNLSKATRP-------D 150 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~-g-------l~~~f~~i~~~~~~~~~~~~~~~~-------~ 150 (256)
+.++||+.++|+.|+++|+ |+||+....++.+++.+ | +.++||.|+++..-. .-|...+. +
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP-~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKP-GFFTEGRPFRQVDVET 261 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCC-cccCCCCceEEEeCCC
Confidence 5779999999999999986 99999999999999996 7 889999888766432 22322110 0
Q ss_pred CCCCCC-----CC----CHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHH-HcCCeEEEEcCC
Q 025190 151 EFPVLL-----KP----SMDAMKLALHVANVDPRHALFLDDNI-KNVTAGK-ALGLRTVLVGKT 203 (256)
Q Consensus 151 ~~~~~~-----Kp----~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~-~~G~~~v~v~~~ 203 (256)
...... ++ ...-...+.+.+++++++++||||+. .||..++ .+||.++++-..
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 001111 11 01236677888899999999999999 8999998 899999998654
No 102
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.32 E-value=8.1e-12 Score=102.64 Aligned_cols=77 Identities=8% Similarity=0.041 Sum_probs=63.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|.+.++-+.. ..+..|+++..+..+ +..+|+.++
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 34455778889999999999999999999999999999999999988877643 345678999877655 666666553
No 103
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.32 E-value=3.1e-11 Score=89.55 Aligned_cols=200 Identities=13% Similarity=0.137 Sum_probs=118.0
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHc--CCCCChhhHhhhhhcC
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL--GYDIGADDYHGFVHGR 83 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 83 (256)
-.|+.|+|||+.-.+.. . ++...+|.+... .+...+....-.....+.++ ....+.+++.+.+
T Consensus 4 ~vi~sDFDGTITl~Ds~-----~-----~itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~l--- 68 (220)
T COG4359 4 PVIFSDFDGTITLNDSN-----D-----YITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFL--- 68 (220)
T ss_pred eEEEecCCCceEecchh-----H-----HHHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHH---
Confidence 34566999999755431 1 245666665443 22222222211111222111 1123345555554
Q ss_pred CCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-eEecccCCcccccCC----CCCCCCCC
Q 025190 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMNPNLSKAT----RPDEFPVL 155 (256)
Q Consensus 84 ~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~~~~~~~----~~~~~~~~ 155 (256)
...+.+.||+++++++++++++ +||+|....+..+++.++=.+-.+. -+.++......=+.| .+...-.+
T Consensus 69 --lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~ 146 (220)
T COG4359 69 --LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGH 146 (220)
T ss_pred --HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCC
Confidence 3567899999999999999986 9999999999999998763222211 111111111111111 11223334
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE---EEcCCCCCCCCCeeeCCcCchHHhHHHHHh
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV---LVGKTVNVGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v---~v~~~~~~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
.|| ..++ .+.-+++.++|+|||.+|+.+|+...+-++ +++...+++.+...+.++.|+..-++.++.
T Consensus 147 dK~--~vI~----~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl~ 216 (220)
T COG4359 147 DKS--SVIH----ELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEFETFYEILKEIEKVLE 216 (220)
T ss_pred Ccc--hhHH----HhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCcccccHHHHHHHHHHHHh
Confidence 555 4444 444456679999999999999999876554 344555677778888888888777776653
No 104
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.31 E-value=1.1e-12 Score=104.88 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=69.1
Q ss_pred EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcccc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di 187 (256)
+.+....+.+...++.++.. +.. .++.. . -+....+.+|...++++++.+|++++++++|||+.||+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~-~---------~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi 178 (225)
T TIGR01482 112 MRYGIDVDTVREIIKELGLN--LVA-VDSGF-D---------IHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDI 178 (225)
T ss_pred EeecCCHHHHHHHHHhcCce--EEE-ecCCc-E---------EEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhH
Confidence 44555566667777777643 111 11110 0 02333467888999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc
Q 025190 188 TAGKALGLRTVLVGKT-VNVGEADYALENVNN 218 (256)
Q Consensus 188 ~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e 218 (256)
+|++.+|+.+++-+.. ..+..++++..+..+
T Consensus 179 ~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 179 DLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred HHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 9999999998877643 345668888776555
No 105
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.29 E-value=3.7e-11 Score=98.87 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC-C----CCC-Ceee--CCcC--chHHhH
Q 025190 155 LLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN-V----GEA-DYAL--ENVN--NLPQVV 223 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-~----~~~-~~~~--~~~~--el~~~l 223 (256)
.+ .|...++++++.+|+++ +++++|||+.||++|++.+|+.+++-+.... + ..+ +.+. .+.. -+.+.|
T Consensus 188 ~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l 266 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAI 266 (273)
T ss_pred CC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHH
Confidence 35 77789999999999999 9999999999999999999999998875432 2 223 4555 3322 255666
Q ss_pred HHHHh
Q 025190 224 PEIWV 228 (256)
Q Consensus 224 ~~~~~ 228 (256)
+.+++
T Consensus 267 ~~~~~ 271 (273)
T PRK00192 267 NKLLS 271 (273)
T ss_pred HHHHh
Confidence 66554
No 106
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.28 E-value=1.1e-10 Score=86.42 Aligned_cols=107 Identities=17% Similarity=0.174 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
...+||++.+.+++-++.|+ |-|.++-..++-...+. .+..+|+..|.. ..+ .|....
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG---------------~KrE~~ 164 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG---------------KKRESQ 164 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc---------------ccccch
Confidence 45789999999999999987 88888888777776654 455677776654 223 588888
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEAD 210 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~ 210 (256)
-|.+++...|++|.+++++.|.++.+.+|+.+||.++.+.++...+-++
T Consensus 165 SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d 213 (229)
T COG4229 165 SYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPD 213 (229)
T ss_pred hHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCC
Confidence 9999999999999999999999999999999999999887765444333
No 107
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.26 E-value=3.3e-12 Score=96.13 Aligned_cols=99 Identities=21% Similarity=0.335 Sum_probs=71.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEec-CChHHHHHHHHhcCcc----------cccceeEecccCCcccccCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTN-SDRNHAITCLKRLEIA----------DCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~-~~~~~~~~~l~~~gl~----------~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
..+.++|++.++|++|+.+|+ ++|. ...+.+++.|+.+++. ++|+..-. .
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI----~------------ 105 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI----Y------------ 105 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE----S------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe----e------------
Confidence 567899999999999999998 6774 4667899999999999 66665322 1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
...|..-|+.+.++.|++++++++++|-..++....+.|..++.+.+|.
T Consensus 106 ---~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 106 ---PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp ---SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred ---cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence 2366688999999999999999999999999999999999999998864
No 108
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.24 E-value=1.8e-10 Score=90.88 Aligned_cols=107 Identities=7% Similarity=-0.052 Sum_probs=70.5
Q ss_pred CCCChhHHHHHH-hhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLC-SITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~-~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..++||+.+.|+ .++++|. |||++....++.+.+..++... +.+++.+-- . ..+| ......+.+.-|...++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le-~-~~gg-~~~g~~c~g~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIE-R-GNGG-WVLPLRCLGHEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeE-E-eCCc-eEcCccCCChHHHHHHH
Confidence 468999999996 7887775 9999999999999988665332 233443311 0 0111 11222333444444444
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
..+ +.+...+.+.|||.+|+++...+|-+.+..++
T Consensus 169 ~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 169 QKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred HHh---CCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 444 55667889999999999999999977664433
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.23 E-value=1.8e-11 Score=100.73 Aligned_cols=77 Identities=8% Similarity=0.024 Sum_probs=61.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCe--eeCCcCc--hHHhHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADY--ALENVNN--LPQVVPE 225 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~--~~~~~~e--l~~~l~~ 225 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|...++-+.. ..+..+++ ++.+..+ +..+|+.
T Consensus 181 eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 181 EVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTH 260 (272)
T ss_pred EeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHH
Confidence 44455667889999999999999999999999999999999999988877643 33444554 6666555 7777877
Q ss_pred HH
Q 025190 226 IW 227 (256)
Q Consensus 226 ~~ 227 (256)
++
T Consensus 261 ~~ 262 (272)
T PRK15126 261 WL 262 (272)
T ss_pred Hh
Confidence 66
No 110
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.23 E-value=7.7e-12 Score=94.58 Aligned_cols=74 Identities=27% Similarity=0.376 Sum_probs=60.9
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC--------CCCCCCeeeCCcCchHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV--------NVGEADYALENVNNLPQ 221 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~--------~~~~~~~~~~~~~el~~ 221 (256)
+....+||+|..|+.+++.+|++|++++||||.. .|+-.|.++||..+.|..+. ....|+...+++-+..+
T Consensus 175 ~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 175 EATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVD 254 (262)
T ss_pred eEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHH
Confidence 4456689999999999999999999999999999 57999999999999996542 12457778877776666
Q ss_pred hHH
Q 025190 222 VVP 224 (256)
Q Consensus 222 ~l~ 224 (256)
+|.
T Consensus 255 ~I~ 257 (262)
T KOG3040|consen 255 LII 257 (262)
T ss_pred HHH
Confidence 653
No 111
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.21 E-value=8.8e-12 Score=98.97 Aligned_cols=95 Identities=9% Similarity=0.069 Sum_probs=67.1
Q ss_pred EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcccc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di 187 (256)
+++......+...++..++..+... +.. +....+..|..+++++++.+|++++++++|||+.||+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~--------------ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 112 MREGKDVDEVREIIKERGLNLVDSG-FAI--------------HIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred ecCCccHHHHHHHHHhCCeEEEecC-ceE--------------EEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 4455555666767777665432211 111 2222356777999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCC-CCCCCCCeeeCCcC
Q 025190 188 TAGKALGLRTVLVGKT-VNVGEADYALENVN 217 (256)
Q Consensus 188 ~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~ 217 (256)
+|++.+|+.+++.+.. ..+..++++..+..
T Consensus 177 ~ml~~ag~~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 177 DLFRVVGFKVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred HHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence 9999999998877643 34456788876543
No 112
>PRK10976 putative hydrolase; Provisional
Probab=99.21 E-value=6.1e-11 Score=97.21 Aligned_cols=77 Identities=6% Similarity=0.048 Sum_probs=60.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCC--eeeCCcCc--hHHhHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEAD--YALENVNN--LPQVVPE 225 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~--~~~~~~~e--l~~~l~~ 225 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|.+.++-+... .+..++ +++.+..+ +...|+.
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 444556778899999999999999999999999999999999999988776543 344454 67776655 6666665
Q ss_pred HH
Q 025190 226 IW 227 (256)
Q Consensus 226 ~~ 227 (256)
++
T Consensus 263 ~~ 264 (266)
T PRK10976 263 LY 264 (266)
T ss_pred Hh
Confidence 43
No 113
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.20 E-value=4.6e-11 Score=97.86 Aligned_cols=77 Identities=9% Similarity=0.112 Sum_probs=61.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
+....+..|..+++++++++|++++++++|||+.||++|.+.+|.+.++-+.. ..+..++++..+..+ +...|+.++
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 44556788999999999999999999999999999999999999998887753 344556666566555 555665543
No 114
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.19 E-value=1.3e-11 Score=99.82 Aligned_cols=96 Identities=23% Similarity=0.252 Sum_probs=79.2
Q ss_pred ChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCccccccee--EecccCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 92 DPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQI--ICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i--~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
+|++.++++.|+++|+ ++||.+.......+..++...++..+ .+.+... .+||+|.+|+.++
T Consensus 140 ~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~--------------~gKP~~~~~~~~~ 205 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIY--------------SGKPYPAIFHKAL 205 (242)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEec--------------CCCCCHHHHHHHH
Confidence 6899999999888776 88999888777677777777666654 3443322 3899999999999
Q ss_pred HHcCCC-CCcEEEEcCCc-cccHHHHHcCCeEEEEc
Q 025190 168 HVANVD-PRHALFLDDNI-KNVTAGKALGLRTVLVG 201 (256)
Q Consensus 168 ~~~~~~-~~~~i~vGDs~-~Di~~a~~~G~~~v~v~ 201 (256)
++++.. ++++++|||+. +|+.+|+++|+.+++|.
T Consensus 206 ~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 206 KECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred HHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 999975 67999999995 99999999999999884
No 115
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.18 E-value=4.5e-11 Score=96.15 Aligned_cols=51 Identities=27% Similarity=0.435 Sum_probs=46.5
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCc-cccHHHHHcCCeEEEEcCC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHA-LFLDDNI-KNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~-i~vGDs~-~Di~~a~~~G~~~v~v~~~ 203 (256)
...+||++.+|+.++++++++++++ ++|||+. +||.+|+++|++++++.++
T Consensus 184 ~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 184 TVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 3578999999999999999988887 9999999 8999999999999998653
No 116
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.17 E-value=3.3e-10 Score=91.70 Aligned_cols=83 Identities=12% Similarity=0.166 Sum_probs=64.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcCccccc-ceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....++||+.++++.|+++|+ ++||+... .....|+.+|+...+ +.++..++ .++|
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-----------------~~~K 177 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-----------------KSSK 177 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-----------------CCCc
Confidence 456789999999999999986 89998643 445788889997643 55655432 3566
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHH
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAG 190 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a 190 (256)
+..+..+.+.+++ +++|||+.+|+..+
T Consensus 178 ~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 178 ESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred HHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 6888888887777 89999999999654
No 117
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.17 E-value=1e-11 Score=89.89 Aligned_cols=92 Identities=21% Similarity=0.319 Sum_probs=72.1
Q ss_pred HHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 025190 99 LCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175 (256)
Q Consensus 99 l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 175 (256)
++.|.+.|+ |+|+..++.++...+.+|+..++..+ +.|...++.+++++++.++
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~-----------------------~dK~~a~~~L~~~~~l~~e 100 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI-----------------------SDKLAAFEELLKKLNLDPE 100 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech-----------------------HhHHHHHHHHHHHhCCCHH
Confidence 344455555 99999999999999999987655443 5666999999999999999
Q ss_pred cEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeee
Q 025190 176 HALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYAL 213 (256)
Q Consensus 176 ~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~ 213 (256)
++.||||..+|+...+++|+.++.... +.....++++.
T Consensus 101 ~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt 139 (170)
T COG1778 101 EVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVT 139 (170)
T ss_pred HhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhh
Confidence 999999999999999999998774432 22233445543
No 118
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.16 E-value=1.1e-10 Score=94.26 Aligned_cols=87 Identities=16% Similarity=0.055 Sum_probs=72.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHH--HHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAI--TCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~--~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++|++|+++|+ ++||+...... ..++++|+.. +|+.|++++.... ..+
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~-------------------~~l 84 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV-------------------QMI 84 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-------------------HHH
Confidence 568999999999999886 99998777665 7899999987 8999998765432 467
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
.++++++++++.++++|||+..|+.....+|.
T Consensus 85 ~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 85 LESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred HhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 77778888999999999999999988876654
No 119
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.16 E-value=7.9e-11 Score=91.63 Aligned_cols=92 Identities=18% Similarity=0.201 Sum_probs=61.5
Q ss_pred hhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCC---CCHHHHHHH
Q 025190 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK---PSMDAMKLA 166 (256)
Q Consensus 93 pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~K---p~~~~~~~~ 166 (256)
|++.++++.+++.|+ |+|++....++.+++.+|+... .+++++..... +....... .+. -|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~~~~~---~~~~~~~~-~~~~~~~K~~~l~~~ 165 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNELFDNG---GGIFTGRI-TGSNCGGKAEALKEL 165 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEEECTT---CCEEEEEE-EEEEESHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEeeeecc---cceeeeeE-CCCCCCcHHHHHHHH
Confidence 777799999998886 9999999999999999998742 12222210000 00000000 000 155777777
Q ss_pred ---HHHcCCCCCcEEEEcCCccccHHHH
Q 025190 167 ---LHVANVDPRHALFLDDNIKNVTAGK 191 (256)
Q Consensus 167 ---~~~~~~~~~~~i~vGDs~~Di~~a~ 191 (256)
... +.+..++++||||.+|+.+++
T Consensus 166 ~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 166 YIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 445 888999999999999999875
No 120
>PLN02887 hydrolase family protein
Probab=99.14 E-value=1.4e-09 Score=97.19 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=61.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|.++++-+.. ..+..++++..+..+ +..+|+.+
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 33444677889999999999999999999999999999999999998877644 345678999877665 55555544
No 121
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.06 E-value=8.8e-10 Score=90.59 Aligned_cols=77 Identities=9% Similarity=0.008 Sum_probs=59.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC---CCCcEEEEcCCccccHHHHHcCCeEEEEcCC-C------CCCCCCeeeCCcCc--
Q 025190 151 EFPVLLKPSMDAMKLALHVANV---DPRHALFLDDNIKNVTAGKALGLRTVLVGKT-V------NVGEADYALENVNN-- 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~---~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~------~~~~~~~~~~~~~e-- 218 (256)
+.+..+-.|..+++++++.+|+ +++++++|||+.||++|.+.+|.++++-+.. . .+..++++......
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g 259 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEG 259 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHH
Confidence 4455577888999999999999 9999999999999999999999988887432 1 22357777776653
Q ss_pred hHHhHHHHH
Q 025190 219 LPQVVPEIW 227 (256)
Q Consensus 219 l~~~l~~~~ 227 (256)
+.+.|+.++
T Consensus 260 ~~~~l~~~~ 268 (271)
T PRK03669 260 WREGLDHFF 268 (271)
T ss_pred HHHHHHHHH
Confidence 555555544
No 122
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.00 E-value=7.4e-10 Score=88.27 Aligned_cols=44 Identities=14% Similarity=0.015 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
+-.|+.+++++++.+|++++++++|||+.||++|.+.+|.+++.
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 44566889999999999999999999999999999999988763
No 123
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.00 E-value=3.1e-09 Score=79.83 Aligned_cols=73 Identities=27% Similarity=0.348 Sum_probs=55.3
Q ss_pred EEecC-------ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCC-----CCC
Q 025190 108 IFTNS-------DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV-----DPR 175 (256)
Q Consensus 108 ivs~~-------~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~-----~~~ 175 (256)
||||+ ....++.+-+.+|+. .+... ..|| ..+..+++.++. +|+
T Consensus 82 IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~------------------~kKP--~~~~~i~~~~~~~~~~~~p~ 137 (168)
T PF09419_consen 82 IVSNSAGSSDDPDGERAEALEKALGIP----VLRHR------------------AKKP--GCFREILKYFKCQKVVTSPS 137 (168)
T ss_pred EEECCCCcccCccHHHHHHHHHhhCCc----EEEeC------------------CCCC--ccHHHHHHHHhhccCCCCch
Confidence 99998 366677777888853 21110 0466 666777777654 499
Q ss_pred cEEEEcCCc-cccHHHHHcCCeEEEEcCCC
Q 025190 176 HALFLDDNI-KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 176 ~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~ 204 (256)
++++|||.+ .|+.+|+.+|+.++|+..+.
T Consensus 138 eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 138 EIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred hEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 999999999 89999999999999998764
No 124
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.97 E-value=1.1e-09 Score=82.42 Aligned_cols=91 Identities=21% Similarity=0.262 Sum_probs=62.3
Q ss_pred ChhHHHHHHhhhcCcE---EEecC---Ch-----------HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 92 DPQLRNLLCSITQRKI---IFTNS---DR-----------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~---~~-----------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.|++.+.|++|.+.|+ |+||- .. ..+..+++.+++. + .++.+.... .
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d-------------~ 94 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKD-------------P 94 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSS-------------T
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCC-------------C
Confidence 3579999999999997 88874 11 3344456666665 3 334333222 2
Q ss_pred CCCCCHHHHHHHHHHcCC----CCCcEEEEcCC-----------ccccHHHHHcCCeEE
Q 025190 155 LLKPSMDAMKLALHVANV----DPRHALFLDDN-----------IKNVTAGKALGLRTV 198 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~----~~~~~i~vGDs-----------~~Di~~a~~~G~~~v 198 (256)
.+||.+.++..+++.++. +.++++||||. -.|..-|.++|+++.
T Consensus 95 ~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 95 CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 599999999999999874 88999999996 468999999999753
No 125
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.96 E-value=1.5e-09 Score=88.42 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=54.8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e 218 (256)
+....+-.|..+++++++.++++++++++|||+.||++|++.+|+.+++.+.. ..+..+++++.+..+
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNE 249 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCC
Confidence 34445677889999999999999999999999999999999999988775432 234557888776544
No 126
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.93 E-value=4.2e-09 Score=85.15 Aligned_cols=68 Identities=18% Similarity=0.177 Sum_probs=56.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e 218 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|...++-+.. ..+..+++++.+..+
T Consensus 179 ei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 179 EITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred EEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 34555667889999999999999999999999999999999999887766543 344668888888777
No 127
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.91 E-value=6.1e-09 Score=84.36 Aligned_cols=50 Identities=22% Similarity=0.504 Sum_probs=46.0
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 141 (256)
.||+.++|++|+++|+ ++|++....+...++.+|+..+|+.++++++...
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 4789999999999986 9999999999999999999999999999988765
No 128
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.86 E-value=3.4e-09 Score=95.60 Aligned_cols=110 Identities=16% Similarity=0.283 Sum_probs=82.8
Q ss_pred CCCChhHHHHHHhhhcCc-E---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..++||+.+++++|+++| + ++|+.....++.+++++|++++|..+. +++|+..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~~~v~ 441 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------------PEDKLAIVK 441 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------------HHHHHHHHH
Confidence 478999999999999998 6 999999999999999999987765431 233344444
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeC--CcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALE--NVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~--~~~el~~~l 223 (256)
. ++..+++|+||||+.+|+.+++++|+.+.+-+.. .....+|+++. ++..+.+.+
T Consensus 442 ~----l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 442 E----LQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred H----HHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 4 4445679999999999999999999766554211 12346888887 566666554
No 129
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.84 E-value=7.4e-09 Score=84.41 Aligned_cols=72 Identities=10% Similarity=-0.050 Sum_probs=55.0
Q ss_pred CCCCCCHHHHHHHHHHcCCC--CCcEEEEcCCccccHHHHHcCCeEEEEcCC----CCCCC--C-CeeeCCcCc--hHHh
Q 025190 154 VLLKPSMDAMKLALHVANVD--PRHALFLDDNIKNVTAGKALGLRTVLVGKT----VNVGE--A-DYALENVNN--LPQV 222 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~--~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~----~~~~~--~-~~~~~~~~e--l~~~ 222 (256)
..+-.|..+++++++.++++ .+++++|||+.||++|.+.+|.++++-+.. ..+.. + +++..+..+ +.+.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~ 251 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREA 251 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHH
Confidence 34667889999999999999 999999999999999999999999888754 23333 3 477655443 4444
Q ss_pred HHH
Q 025190 223 VPE 225 (256)
Q Consensus 223 l~~ 225 (256)
|+.
T Consensus 252 l~~ 254 (256)
T TIGR01486 252 LEH 254 (256)
T ss_pred HHH
Confidence 443
No 130
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.84 E-value=1.1e-08 Score=79.73 Aligned_cols=169 Identities=16% Similarity=0.151 Sum_probs=89.9
Q ss_pred eE-EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 6 NC-LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS--ETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 6 k~-viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
|+ |++|+||||.|....+... +.+.++.. ....+.........+|.. .....+.+...+.+
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~--------~n~~~~~~~~~~~~~~~~~~~~~~~g~~--------~~e~~~~~~~~~~~ 65 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEW--------FNEEFGKNPELTPEDITGYWDWEKWGIT--------EPEFYEKLWRFYEE 65 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHH--------HHHHTTTS----GGGGTSSSHHHHHHHH--------STTHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcccHHHHHHH--------HHHHcCCCCCCCHHHhhhhhHHHHhCCC--------CHHHHHHHHHHHhC
Confidence 45 8999999999886543333 33455554 111110000011111110 01112233333433
Q ss_pred CCCCCCCCCChhHHHHHHhhhcCc--E-EEecCChH-------HHHHHHHh-cCcccccceeEecccCCcccccCCCCCC
Q 025190 83 RLPYDLIKPDPQLRNLLCSITQRK--I-IFTNSDRN-------HAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 83 ~~~~~~~~~~pg~~~~l~~l~~~~--~-ivs~~~~~-------~~~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.-.+..++|.||+.+.|++|.+.| . ++|..... .....+++ ++...+-+.+++.
T Consensus 66 ~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~--------------- 130 (191)
T PF06941_consen 66 PGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTG--------------- 130 (191)
T ss_dssp TTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEES---------------
T ss_pred hhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEec---------------
Confidence 333678899999999999999997 2 56655332 22334444 3432233444442
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCC-CCeeeCCcCchHHhH
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE-ADYALENVNNLPQVV 223 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~-~~~~~~~~~el~~~l 223 (256)
.|. ..+. -++|+|++.++..+...|++++++..+.+... .-..+.++.|+.+++
T Consensus 131 ----~K~----------~v~~----DvlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i 185 (191)
T PF06941_consen 131 ----DKT----------LVGG----DVLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLI 185 (191)
T ss_dssp ----SGG----------GC------SEEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHH
T ss_pred ----CCC----------eEec----cEEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHH
Confidence 121 1122 28999999999999999999999987765533 478899999988776
No 131
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.82 E-value=7.3e-09 Score=93.00 Aligned_cols=110 Identities=17% Similarity=0.275 Sum_probs=85.2
Q ss_pred CCCChhHHHHHHhhhcCcE----EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~----ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.+++||+.+.++.|+++|+ ++|+.....++..++++|++++|..+. +.+|.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~---- 415 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------------------PEDKL---- 415 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------------------cHHHH----
Confidence 4789999999999999876 899999999999999999987765431 23333
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeee--CCcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~--~~~~el~~~l 223 (256)
.++++++...++++||||+.||+.+++.+|+...+-..+ .....+|+++ +++.+|.+.+
T Consensus 416 ~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 416 EIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 355555555689999999999999999999865554222 2235689988 8888887755
No 132
>PTZ00445 p36-lilke protein; Provisional
Probab=98.80 E-value=2.7e-08 Score=76.59 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=81.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChH---------------HHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~---------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.+.|.+.++++.|++.|+ +||=++.+ .++..++..+-+--...+++....-+ ....--.
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w---~~p~~y~ 151 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW---QEPSDYR 151 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc---CChhhhh
Confidence 467899999999999987 77766553 45666666654433455554332211 1111112
Q ss_pred CCCCCCCCHHH--H--HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 152 FPVLLKPSMDA--M--KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 152 ~~~~~Kp~~~~--~--~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.....||+|.. | +++++++|++|+++++|+|+..++++|+++|+.++.+..+
T Consensus 152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 34568999999 8 9999999999999999999999999999999999988654
No 133
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.74 E-value=1.1e-07 Score=77.17 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=43.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
...+.+|..+++++++.++++++++++|||+.||++|++.++..++.+.+.
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 444789999999999999999999999999999999999966566666543
No 134
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.74 E-value=7.2e-08 Score=78.29 Aligned_cols=95 Identities=23% Similarity=0.305 Sum_probs=67.7
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC-----------------CCCCC
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA-----------------TRPDE 151 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~-----------------~~~~~ 151 (256)
.|++.++|++|+++|+ ++|++....+...++.+|+..+|+.++++++........ .+...
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~ 229 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD 229 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence 3789999999999986 899999999999999999999999999988865432100 00010
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCc-EEEEcCCc-ccc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRH-ALFLDDNI-KNV 187 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~-~i~vGDs~-~Di 187 (256)
....+| +|..+.+.+++.|++.-. +-.|+|=. ||+
T Consensus 230 ~~~lPK-SprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 230 VKNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred ccCCCC-CCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 011122 357788889999987544 44777766 443
No 135
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.69 E-value=7.3e-08 Score=86.99 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=81.0
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
.+++||+.++++.|+++|+ ++|+.....++.+++++|++ ++. + .. +++|+..+++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~-~-~~---------------p~~K~~~v~~ 461 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRA-E-VL---------------PDDKAALIKE 461 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEc-c-CC---------------hHHHHHHHHH
Confidence 4789999999999999987 89999999999999999995 222 1 11 2344454444
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeee--CCcCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~--~~~~el~~~l 223 (256)
+. .++++|+||||+.||+.+++++|+...+-.. ......+|+++ +++.+|.+++
T Consensus 462 l~----~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 462 LQ----EKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred HH----HcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 43 3678999999999999999999986554421 12235688888 4777776654
No 136
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.62 E-value=2.7e-07 Score=64.98 Aligned_cols=115 Identities=8% Similarity=0.089 Sum_probs=92.6
Q ss_pred CCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
....+|+.+.+.+++|+..- + |+|+.....+.+.++..|+. .+.++. -.++..-.
T Consensus 27 tgGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a---------------------~a~~e~K~ 83 (152)
T COG4087 27 TGGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA---------------------GADPEMKA 83 (152)
T ss_pred cCcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec---------------------ccCHHHHH
Confidence 35689999999999999872 2 88888888999999999976 455554 33446777
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----CCCCeeeCCcCchHHhHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----GEADYALENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----~~~~~~~~~~~el~~~l~ 224 (256)
.++++++-+.+.|++|||+.||+.+.+.+.++.+-+...... ..+|+++.++.|+.+++.
T Consensus 84 ~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 84 KIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147 (152)
T ss_pred HHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhh
Confidence 899999888899999999999999999999988877653322 468999999888887764
No 137
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.62 E-value=1.6e-08 Score=76.48 Aligned_cols=97 Identities=13% Similarity=0.099 Sum_probs=81.6
Q ss_pred CCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.+...||+.+||+.|++.. + |.|++....++.+++.++... +|+.+++.+.+.. .+++ +.
T Consensus 40 ~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~--------------~~~~---~~ 102 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF--------------TNGK---YV 102 (162)
T ss_pred EEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE--------------eCCC---EE
Confidence 4567899999999998872 2 999999999999999999876 8898888877653 3453 56
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
+.++.+|.+++++|+|||++.++.++..+|+.+....
T Consensus 103 K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 103 KDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred eEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 7788889999999999999999999999998876554
No 138
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.59 E-value=1.1e-06 Score=69.43 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=60.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHH---HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC--
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP-- 158 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp-- 158 (256)
...++.|++.++++.|+++|+ ++|+..... +...|...|+..+ +.++....... .|+
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~--------------~~~~~ 181 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS--------------NKTVV 181 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC--------------CchHh
Confidence 566899999999999999997 889987655 6677888898765 55554321111 232
Q ss_pred --CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 159 --SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 159 --~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
|.....++.+ -|. .=+..|||..+|+... .+|.++.-.+
T Consensus 182 ~yKs~~R~~l~~-~GY--rIv~~iGDq~sDl~G~-~~~~RtFKLP 222 (229)
T TIGR01675 182 TYKSEVRKSLME-EGY--RIWGNIGDQWSDLLGS-PPGRRTFKLP 222 (229)
T ss_pred HHHHHHHHHHHh-CCc--eEEEEECCChHHhcCC-CccCceeeCC
Confidence 1122222222 222 2267999999999653 4554555443
No 139
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.56 E-value=1.9e-07 Score=88.54 Aligned_cols=134 Identities=12% Similarity=0.184 Sum_probs=96.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc--CCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK--ATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~~~~ 164 (256)
++.||+.+.++.|++.|+ ++|+.....+..+.+.+|+...++.++++++.....-. .........+++..|+--.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 789999999999999997 89999999999999999998777666665544210000 0000011233456667777
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee--CCcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~--~~~~el~~~l 223 (256)
.+.+.++-..+.+.|+||+.||..++++++++..+-..+. .+..+|+++ +++..+...+
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 7888777767889999999999999999998776532222 335689998 5577777654
No 140
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.55 E-value=1.5e-07 Score=75.19 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 156 LKPSMDAMKLALHVANV--DPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+-.|+.+++.+++.+++ ++.++++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 44556889999999876 66689999999999999999999765
No 141
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.53 E-value=5.7e-07 Score=63.34 Aligned_cols=79 Identities=19% Similarity=0.285 Sum_probs=60.7
Q ss_pred CCCCChhHHHHHHhhhcCcEE---EecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH---H
Q 025190 88 LIKPDPQLRNLLCSITQRKII---FTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM---D 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~i---vs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~---~ 161 (256)
.+.++|.+++++++++..|.| .|=+....+-+.|+.+++..||+-++. +|.| .
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi---------------------ePhP~K~~ 97 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI---------------------EPHPYKFL 97 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe---------------------cCCChhHH
Confidence 468899999999999999984 444566777788999999999998775 4433 4
Q ss_pred HHHHHHHHc------CCCCCcEEEEcCCcccc
Q 025190 162 AMKLALHVA------NVDPRHALFLDDNIKNV 187 (256)
Q Consensus 162 ~~~~~~~~~------~~~~~~~i~vGDs~~Di 187 (256)
++.+++++. .+.|++++|++|+.--+
T Consensus 98 ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 98 MLSQLLREINTERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred HHHHHHHHHHHhhccccCcceEEEEecccccH
Confidence 455555553 46899999999987443
No 142
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.48 E-value=1.3e-06 Score=71.10 Aligned_cols=44 Identities=20% Similarity=0.148 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 156 LKPSMDAMKLALHVANVD--PRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~--~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
.-+|..++..+.+.++-. +-.++.+|||+||+.|.+.+-+.+|.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 457778999999987754 44899999999999999999988775
No 143
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.47 E-value=3.7e-07 Score=86.27 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=82.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-.++||+.+.++.|++.|+ ++|+.....++.+++++|+.++|..+ .| +-...
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-----------------------~p--~~K~~ 703 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-----------------------LP--DGKAE 703 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC-----------------------CH--HHHHH
Confidence 3788999999999999987 89999999999999999987544322 22 22345
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCC--eeeCCcCchHHhHH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEAD--YALENVNNLPQVVP 224 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~--~~~~~~~el~~~l~ 224 (256)
++++++..+++++||||+.||+.+++.+|+..++-+... ....+| +..+++..+..++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 666777778899999999999999999999776653221 223344 44567777776654
No 144
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.47 E-value=4.7e-07 Score=81.53 Aligned_cols=47 Identities=6% Similarity=-0.004 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCCccccHHHHHcCCeEEEEcC
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFL--DDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~v--GDs~~Di~~a~~~G~~~v~v~~ 202 (256)
+-.|..+++++++.++++.++++.| ||+.||+.|.+.+|.++++-+.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 5577799999999999998999988 9999999999999998887543
No 145
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.44 E-value=1.1e-05 Score=70.40 Aligned_cols=115 Identities=23% Similarity=0.244 Sum_probs=70.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc-C--------cccccceeEecccCCcccccCCCC------
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-E--------IADCFDQIICFETMNPNLSKATRP------ 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~-g--------l~~~f~~i~~~~~~~~~~~~~~~~------ 149 (256)
.+.+.|.+..+|+.|++.|. ++||+.-..+...++.+ | ..++||.|++...- +.-|...+.
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~K-P~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARK-PGFFTEGRPFREVDT 259 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--C-CHHHCT---EEEEET
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCC-CcccCCCCceEEEEC
Confidence 34567899999999999994 99999999999999875 2 44689998876532 222222110
Q ss_pred -CCCCC-------CCCC---CHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHc-CCeEEEEcCC
Q 025190 150 -DEFPV-------LLKP---SMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKAL-GLRTVLVGKT 203 (256)
Q Consensus 150 -~~~~~-------~~Kp---~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~-G~~~v~v~~~ 203 (256)
+.... ..|. ...-...+.+.+|....+|+||||+. .||...++. |+.|+.|-..
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 00001 1111 12336677777888889999999999 897777766 9999988544
No 146
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.40 E-value=4.5e-07 Score=72.42 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=58.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
..+.||+.+|++.++++|+ ++|+.. .......|...|...+-..++-....... ... ..-|...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~--------~~~--~~yK~~~ 183 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK--------KSA--VEYKSER 183 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS----------------SHHH
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc--------ccc--cccchHH
Confidence 3889999999999999997 899874 44556678888976543344433322110 000 0113355
Q ss_pred HHHHHHH-cCCCCCcEEEEcCCccccHHHHHc
Q 025190 163 MKLALHV-ANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 163 ~~~~~~~-~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
...+.++ +.+ +++|||..+|+..++..
T Consensus 184 r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 184 RKEIEKKGYRI----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp HHHHHHTTEEE----EEEEESSGGGCHCTHHH
T ss_pred HHHHHHcCCcE----EEEeCCCHHHhhccccc
Confidence 5555555 444 88999999999995443
No 147
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.37 E-value=7.2e-07 Score=72.23 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+.+-.|..+++++++++++++++++++|||.||+.|. ..+...|.|.+.
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 3455677999999999999999999999999999999 666677777643
No 148
>PTZ00174 phosphomannomutase; Provisional
Probab=98.37 E-value=1.4e-06 Score=70.62 Aligned_cols=47 Identities=6% Similarity=-0.171 Sum_probs=38.9
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~ 201 (256)
+....+-.|..+++++++. ++++++||| +.||++|.+.+|.....|.
T Consensus 181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3444567788999999998 589999999 8999999998887766665
No 149
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.36 E-value=4e-06 Score=74.14 Aligned_cols=100 Identities=14% Similarity=0.020 Sum_probs=58.4
Q ss_pred CChhHHHHHHhhhcCcEEEecCChHHHHHHHHh-cCcccccceeEecccC--CcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 91 PDPQLRNLLCSITQRKIIFTNSDRNHAITCLKR-LEIADCFDQIICFETM--NPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~--~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
+.|.+.+.++..... ++||.+....++..++. +|++. +++.+-- ..+.|+|.-.....+.+.-| ...+.
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VIgTeLev~~~G~~TG~i~g~~~c~Ge~K---v~rl~ 182 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VLGTELEVSKSGRATGFMKKPGVLVGDHK---RDAVL 182 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EEecccEECcCCEEeeeecCCCCCccHHH---HHHHH
Confidence 667777766654332 69999999999999975 78653 3333211 01122221111001122222 33333
Q ss_pred HHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 168 HVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 168 ~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
+.++.+... +++|||.+|..+...|+-..+.
T Consensus 183 ~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 183 KEFGDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred HHhCCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 556654334 8999999999999999866543
No 150
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.33 E-value=2.8e-06 Score=58.89 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=51.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCCh---HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++++.|+++|. ++||++. ......|+.+|+.--.+.++++.. ..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~-----------------------~~ 70 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM-----------------------AA 70 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH-----------------------HH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH-----------------------HH
Confidence 578999999999999875 9999853 344556788898865677887653 23
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
...+++. -...+++++|-. ...+.++.+|+
T Consensus 71 ~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 71 AEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp HHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred HHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 3334332 234678888865 44555555554
No 151
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.32 E-value=1.2e-05 Score=64.89 Aligned_cols=101 Identities=9% Similarity=0.054 Sum_probs=60.1
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....++.|++.+|.+.++++|+ ++|+.... .....|...|+..+ +.++....... .+.+
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~--------------~~~~ 205 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDN--------------SAEN 205 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCC--------------ccch
Confidence 4567899999999999999997 88998653 34556777787654 44444322111 2222
Q ss_pred HHHHHHH----HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 160 MDAMKLA----LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 160 ~~~~~~~----~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
...++.. +.+-|. .=+..|||..+|+......+.++.-.+++
T Consensus 206 av~yKs~~R~~li~eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 206 AVEYKTAARAKLIQEGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred hHHHHHHHHHHHHHcCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 2223322 112232 23679999999996554223455544433
No 152
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.25 E-value=2.6e-06 Score=68.95 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc-------CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL-------GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~-------G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.|...++.+++++++++.++++|||+.+|+.+++.+ |..++.+..+..+..+++++++..++.++|..+.
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 346999999999999999999999999999999998 6677888766677789999999999998887654
No 153
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.23 E-value=4.6e-06 Score=79.61 Aligned_cols=133 Identities=11% Similarity=0.097 Sum_probs=88.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc----cceeEecccCCccc--ccCCCCCCCCCCCCCCH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC----FDQIICFETMNPNL--SKATRPDEFPVLLKPSM 160 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~--~~~~~~~~~~~~~Kp~~ 160 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+... ....+++....... ............++..|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 688999999999999997 8888888999999999998531 11223322111000 00000001122344555
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCC--cCchHHhH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALEN--VNNLPQVV 223 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~--~~el~~~l 223 (256)
+--..+.+.++-..+.+.++||+.||+.+.+.++++.++- .+ ..+..+|+++.+ +..+.+.+
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 6667777777766677889999999999999999977654 33 233569999987 66666654
No 154
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.19 E-value=2.8e-05 Score=58.44 Aligned_cols=102 Identities=12% Similarity=0.065 Sum_probs=59.5
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChHHHH---HHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCC---
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAI---TCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKP--- 158 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~~~~---~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp--- 158 (256)
..|++.+++++++++|+ ++|++...... ..+..+ |..-....++++......-+. ......+|
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~-----~e~i~~~~~~~ 102 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALH-----REVISKKPEVF 102 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhh-----cccccCCHHHH
Confidence 35899999999999986 88888766663 566552 211111345544432210000 01112333
Q ss_pred CHHHHHHHHHHcCCCCCcE-EEEcCCccccHHHHHcCCeE
Q 025190 159 SMDAMKLALHVANVDPRHA-LFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-i~vGDs~~Di~~a~~~G~~~ 197 (256)
|...++.+.+.+.-..... ..+||+.+|+.+=+.+|+..
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 4455666665543212233 45888899999999999973
No 155
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=98.18 E-value=1.4e-05 Score=62.51 Aligned_cols=95 Identities=13% Similarity=0.197 Sum_probs=65.0
Q ss_pred CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHH----HHHHHHhcCcccccce-eEecccCCc
Q 025190 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNH----AITCLKRLEIADCFDQ-IICFETMNP 141 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~----~~~~l~~~gl~~~f~~-i~~~~~~~~ 141 (256)
.++++.|...... ....+.||+.+|++...++|. .+||+..+. ...-|...|+...... ++--.+
T Consensus 106 ~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~--- 178 (274)
T COG2503 106 GFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD--- 178 (274)
T ss_pred CCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC---
Confidence 4566666665543 566899999999999999986 899987665 4556777888765433 222211
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHH
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTA 189 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~ 189 (256)
.|++...+..+.+-+ .-++.|||+..|+-.
T Consensus 179 --------------~k~Ke~R~~~v~k~~----~iVm~vGDNl~DF~d 208 (274)
T COG2503 179 --------------KKSKEVRRQAVEKDY----KIVMLVGDNLDDFGD 208 (274)
T ss_pred --------------CCcHHHHHHHHhhcc----ceeeEecCchhhhcc
Confidence 466656666665534 449999999988643
No 156
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.07 E-value=3.7e-05 Score=70.65 Aligned_cols=107 Identities=14% Similarity=0.225 Sum_probs=76.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC--CHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP--SMDAM 163 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp--~~~~~ 163 (256)
-.+.|++...++.||+.|+ ++|+.....++.+.++.| ++.+++. -+| |.+.+
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~ae-------------------v~P~~K~~~I 778 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAE-------------------VLPEQKAEKI 778 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEec-------------------cCchhhHHHH
Confidence 3788999999999999998 899999999999999999 5666652 233 33455
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeee--CCcCchHHh
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYAL--ENVNNLPQV 222 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~--~~~~el~~~ 222 (256)
+.+.++- ..+.||||+.||-.+...+.++.+..... ..-..+|.+. +++.+++..
T Consensus 779 k~lq~~~----~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 779 KEIQKNG----GPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFA 836 (951)
T ss_pred HHHHhcC----CcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHH
Confidence 5555443 56999999999999988888776554433 2334466553 444444443
No 157
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.06 E-value=9.1e-06 Score=65.41 Aligned_cols=50 Identities=14% Similarity=-0.007 Sum_probs=44.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
..+.+.+|+.++++++++++++++++++|||+.||+.|++.+|...++-+
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n 202 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN 202 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC
Confidence 34457889999999999999999999999999999999999998887654
No 158
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.05 E-value=8.2e-06 Score=76.11 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=75.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-+++||+.+.++.|++.|+ ++|+.....++.+.+++|+..+++ .. +..|+..+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~-------~~---------------p~~K~~~v-- 622 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG-------LL---------------PEDKVKAV-- 622 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC-------CC---------------HHHHHHHH--
Confidence 3889999999999999987 999999999999999999862211 11 11233433
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCCeee--CCcCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~~~~--~~~~el~~~l 223 (256)
++++ ...+++||||+.||..+++.++++.++-+... ....+|.++ +++..|.+.+
T Consensus 623 --~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 623 --TELN-QHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred --HHHh-cCCCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 4444 23589999999999999999998877653221 223356554 4555555443
No 159
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.02 E-value=0.00023 Score=57.70 Aligned_cols=113 Identities=20% Similarity=0.209 Sum_probs=72.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHH---HHhcCccccccee-Eecc-----------cCC-cccccCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITC---LKRLEIADCFDQI-ICFE-----------TMN-PNLSKATRP 149 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~---l~~~gl~~~f~~i-~~~~-----------~~~-~~~~~~~~~ 149 (256)
-..-+.+.++++.|+.+|+ .+|.......... |+.+|++ |+.. +..+ ... +-++.|
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~G--- 154 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDG--- 154 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecC---
Confidence 3556789999999999885 7787765555444 4455654 2111 0000 000 000011
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHH----HHcCCeEEEEcCCCCCC
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAG----KALGLRTVLVGKTVNVG 207 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a----~~~G~~~v~v~~~~~~~ 207 (256)
-....+-++..++..++.+.|..|+++|||+|+..++... +..|+.+.++.+...+.
T Consensus 155 -Ilft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~~ 215 (252)
T PF11019_consen 155 -ILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAEE 215 (252)
T ss_pred -eEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchhh
Confidence 1122356778999999999999999999999999876554 44588888887665443
No 160
>PLN02423 phosphomannomutase
Probab=97.97 E-value=0.00024 Score=57.52 Aligned_cols=45 Identities=9% Similarity=-0.149 Sum_probs=36.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEcC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~~ 202 (256)
+..+-.|..++++++ +++++++||| +.||++|.+.-|+.++-|..
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 334666777777777 8999999999 79999999998888876643
No 161
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.95 E-value=0.00013 Score=56.66 Aligned_cols=151 Identities=16% Similarity=0.115 Sum_probs=85.3
Q ss_pred CChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcC--cEEEecCChHHHHHHHHhcCccc--------ccceeEecc---
Q 025190 71 IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR--KIIFTNSDRNHAITCLKRLEIAD--------CFDQIICFE--- 137 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~--~~ivs~~~~~~~~~~l~~~gl~~--------~f~~i~~~~--- 137 (256)
.+.+++++.- ..+.++.||+.+.++.|+.. -+++|.+...+++....++|+.. -+|.+-.-+
T Consensus 69 Vt~~dlrr~s-----E~sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR 143 (315)
T COG4030 69 VTNRDLRRIS-----ELSAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER 143 (315)
T ss_pred CcHHHHHHHH-----HhhcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHH
Confidence 4555555543 34578899999999999985 56999999999999999887621 112110000
Q ss_pred ------------cCCc-------ccccCCCCC--------CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHH
Q 025190 138 ------------TMNP-------NLSKATRPD--------EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAG 190 (256)
Q Consensus 138 ------------~~~~-------~~~~~~~~~--------~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a 190 (256)
..+. .+|+....+ ...+-+-.+...++..++.-+.+.+ +++||||.+|+++.
T Consensus 144 ~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml 222 (315)
T COG4030 144 EELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKML 222 (315)
T ss_pred HHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHH
Confidence 0000 111111111 1111223345566666666666665 99999999999998
Q ss_pred HHcC----CeEEEEcCCCCCCCCCe--eeCCcCchHHhHHHHH
Q 025190 191 KALG----LRTVLVGKTVNVGEADY--ALENVNNLPQVVPEIW 227 (256)
Q Consensus 191 ~~~G----~~~v~v~~~~~~~~~~~--~~~~~~el~~~l~~~~ 227 (256)
+.+. +...+.++...-..+|. +.++...+..+|+-+.
T Consensus 223 ~~~rgrGglAvaFNGNeYal~eAdVAvisp~~~a~~pvielf~ 265 (315)
T COG4030 223 EAARGRGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIELFM 265 (315)
T ss_pred HHhhccCceEEEecCCcccccccceEEeccchhhhhHHHHHHH
Confidence 8762 22233333332233444 4444445555554433
No 162
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.91 E-value=2.8e-05 Score=71.11 Aligned_cols=87 Identities=9% Similarity=0.124 Sum_probs=67.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.||+++.++.|++.|+ ++|+.....++.+.+.+|+++++ .. ..| +--..+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~-------------------~~P--edK~~~ 500 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AE-------------------ATP--EDKIAL 500 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cC-------------------CCH--HHHHHH
Confidence 788999999999999997 89999999999999999986432 21 233 223333
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.++++-....+.|+||+.||..+.+.++++.++-+
T Consensus 501 v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~ 535 (675)
T TIGR01497 501 IRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNS 535 (675)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 33333334569999999999999999999988753
No 163
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.85 E-value=0.00019 Score=55.90 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=80.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCc---ccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEI---ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl---~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.+++++...++.-+..|+ |-|.++...++.+..+.+- ..++++.|-. ..| .|-....|
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG---------------~K~e~~sy 186 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG---------------LKVESQSY 186 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc---------------ceehhHHH
Confidence 789999999999999886 8888888877777766542 2334433322 122 68888999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
..|.+..+.++.++++.-|-..-..+|+.+|+.+..+.++.+.
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna 229 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNA 229 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCC
Confidence 9999999999999999999999999999999999888766543
No 164
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.83 E-value=0.00031 Score=56.63 Aligned_cols=97 Identities=22% Similarity=0.270 Sum_probs=66.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC-----------------CCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA-----------------TRP 149 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~-----------------~~~ 149 (256)
.+.|.+.+-|.+|++.|. +=|.|.++++...++.+++.++||.+++++......-.+ .+.
T Consensus 142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 345677888899999984 779999999999999999999999999877544211111 001
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCc-EEEEcCCc-ccc
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRH-ALFLDDNI-KNV 187 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~-~i~vGDs~-~Di 187 (256)
+.....+| +|..+.+.+++.|++.-. +-.|+|=. ||+
T Consensus 222 ~~~~~LPK-SPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 222 TNVNNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred CcCCCCCC-CCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 11111222 357788899999997654 44777766 443
No 165
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.81 E-value=6.7e-05 Score=68.99 Aligned_cols=110 Identities=17% Similarity=0.302 Sum_probs=80.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-++.|++.+.++.|++.|+ ++|+.....++.+.+++|+++++..+ +| +--..
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ael-----------------------lP--edK~~ 590 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL-----------------------LP--EDKAE 590 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccC-----------------------Cc--HHHHH
Confidence 3788999999999999997 89999999999999999986655443 33 22333
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc-CCCCCCCCCeee--CCcCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG-KTVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~-~~~~~~~~~~~~--~~~~el~~~l 223 (256)
+.++++-.-..+.||||+.||-.+...+-++.++-. .......+|.++ +++..+.+.+
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 444444333679999999999999999988877665 222334566654 4466666554
No 166
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.77 E-value=6.3e-05 Score=68.91 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=69.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.|++++.+++|++.|+ ++|+.+...+..+.+.+|++++|.. .+| +--..+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~-----------------------~~P--edK~~i 495 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE-----------------------CKP--EDKINV 495 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC-----------------------CCH--HHHHHH
Confidence 788999999999999997 8999999999999999999753221 233 445555
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.+.++-.-+.+.|+||+.||..+.+++.++.++-
T Consensus 496 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 496 IREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred HHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 5665555567899999999999999999888776
No 167
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.77 E-value=0.00012 Score=63.03 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....+|....+++..|+++|+ ++|-+....++.+.+++. +.++.-++.. .+.....||.+.+
T Consensus 252 ~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa----------~~~iNW~~K~eNi 316 (574)
T COG3882 252 AEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFA----------VFQINWDPKAENI 316 (574)
T ss_pred CCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhh----------hheecCCcchhhH
Confidence 344666778899999999998 677777777887777765 3334333332 2344589999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
+.+++++++..+..+|++|++..-+.-+.-+-
T Consensus 317 rkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 317 RKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred HHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999999999988888888775
No 168
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.71 E-value=9.1e-05 Score=67.98 Aligned_cols=107 Identities=11% Similarity=0.128 Sum_probs=77.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.||+++.++.|++.|+ ++|+.....++.+.+.+|++++ +.. .+| +--..+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A~-------------------~~P--edK~~i 499 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LAE-------------------ATP--EDKLAL 499 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----Ecc-------------------CCH--HHHHHH
Confidence 678999999999999997 8999999999999999998643 221 233 444455
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC--CcCchHHh
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE--NVNNLPQV 222 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~--~~~el~~~ 222 (256)
.++++-..+-+.|+||+.||..+.+++.++.++- .+. .+..+|.+.- ++..+.+.
T Consensus 500 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~a 558 (679)
T PRK01122 500 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEV 558 (679)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHH
Confidence 5555544556999999999999999999888876 332 2344555543 34444443
No 169
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.69 E-value=3e-05 Score=60.86 Aligned_cols=48 Identities=17% Similarity=0.031 Sum_probs=43.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+..+.+.+|+.++++++++++++++++++|||+.||+.+++.+|+..+
T Consensus 156 ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 156 EVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 334457889999999999999999999999999999999999998875
No 170
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.68 E-value=9e-05 Score=55.56 Aligned_cols=80 Identities=23% Similarity=0.269 Sum_probs=61.1
Q ss_pred CCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcc-ccc-ceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIA-DCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~-~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|++|++.. + |+|++....+..+++.++.. .+| +.+++.+++... ..|
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~------------~~K----- 117 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP------------HTK----- 117 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC------------ccc-----
Confidence 45678999999999999762 2 99999999999999999988 488 677777664310 112
Q ss_pred HHHHHHHcCCCCCcEEEEcCCcc
Q 025190 163 MKLALHVANVDPRHALFLDDNIK 185 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~ 185 (256)
.+-..++.+.+.++.|+|++.
T Consensus 118 --dL~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 118 --SLLRLFPADESMVVIIDDRED 138 (156)
T ss_pred --cHHHHcCCCcccEEEEeCCHH
Confidence 222446778899999999984
No 171
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.67 E-value=0.00034 Score=52.30 Aligned_cols=91 Identities=20% Similarity=0.194 Sum_probs=60.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHH----HHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAIT----CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~----~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
.|-.-+++++...+++|- .+|+...-.+.. +.+.+.+.+....+|.++. .||..-.
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk-----------------~k~~qy~ 176 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK-----------------PKPGQYT 176 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC-----------------CCccccc
Confidence 455567789988888873 888876554433 3344556555555666542 2332222
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
-.+.+...++ -|+.|||-+||.+|+.+|.+.+-+-
T Consensus 177 Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 177 KTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ccHHHHhcCc----eEEecCCchhhhHHHhcCccceeEE
Confidence 3345555665 5899999999999999999988664
No 172
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.66 E-value=0.00012 Score=70.32 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=87.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc--CCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK--ATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~~~~ 164 (256)
++.|++++.++.|++.|+ ++|+.....+..+.+.+|+.+--..++++.+....... .........+++-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 778999999999999997 89999999999999999986432334444332210000 0000000112333445555
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeC--CcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALE--NVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~--~~~el~~~l 223 (256)
.+.+.++-.-+.+.|+||+.||..+.+++.++.++-..+ ..+..+|+++. ++..+...+
T Consensus 659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 555555544557999999999999999999888764233 23456888876 565555544
No 173
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.65 E-value=0.00017 Score=68.58 Aligned_cols=130 Identities=9% Similarity=0.130 Sum_probs=83.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC--CCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA--TRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~--~~~~~~~~~~Kp~~~~~~ 164 (256)
+|.|++++.++.|++.|+ ++|+.....+..+.+.+|+.. +.++++.+....-... ........+.+-.|+--.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 778999999999999997 899999999999999999962 2333333221100000 000000112333445555
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeeeC--CcCchHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYALE--NVNNLPQ 221 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~~--~~~el~~ 221 (256)
++.+.++-.-+.+.|+||+.||..+.+.+.++.++-+. ...+..+|.++- ++..+..
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ 652 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEE 652 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHH
Confidence 55555555556799999999999999999999876531 223456787763 3444443
No 174
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.62 E-value=0.00021 Score=58.61 Aligned_cols=75 Identities=19% Similarity=0.196 Sum_probs=60.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc---CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHhcCC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL---GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~---G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 231 (256)
.+-.|..+++++++.++++.++++++||+.||+.|.+.+ +-.+|.++.. ...|.+.+++..++..+|..+.....
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG--ATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC--CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 355788999999999999999999999999999999988 2344555433 45589999999999999988774444
No 175
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.61 E-value=0.0001 Score=55.43 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=59.9
Q ss_pred CCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCc-ccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEI-ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.+.+.||+.+||+.|.+.. + +.|.+....++.+++.+.- ..+|+.++..+.+... .+. +.
T Consensus 34 ~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~-------------~~~----~~ 96 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD-------------KGS----YI 96 (159)
T ss_dssp EEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-------------TTE----EE
T ss_pred eEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-------------ccc----cc
Confidence 3467899999999997653 3 9999999999999999987 5678988887765421 111 01
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
+-++..+-+.+++|+|+|++.-...-...+
T Consensus 97 KdL~~l~~~~~~vvivDD~~~~~~~~~~N~ 126 (159)
T PF03031_consen 97 KDLSKLGRDLDNVVIVDDSPRKWALQPDNG 126 (159)
T ss_dssp --GGGSSS-GGGEEEEES-GGGGTTSGGGE
T ss_pred cchHHHhhccccEEEEeCCHHHeeccCCce
Confidence 345555667899999999997543334443
No 176
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.60 E-value=0.00018 Score=69.67 Aligned_cols=133 Identities=9% Similarity=0.038 Sum_probs=87.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc----------cceeEecccCCccccc--CCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC----------FDQIICFETMNPNLSK--ATRPDEFPV 154 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~----------f~~i~~~~~~~~~~~~--~~~~~~~~~ 154 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.+- -..++++.......-. .........
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 778999999999999997 8999999999999999999532 1234444433210000 000001112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCC--cCchHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALEN--VNNLPQV 222 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~--~~el~~~ 222 (256)
+++-.|+--..+.+.++-..+.+.++||+.||..+.+.+.++.++-..+ ..+..+|+++.+ +..+...
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence 3444555556666666555567899999999999999999988864233 234568888855 5555443
No 177
>PLN02645 phosphoglycolate phosphatase
Probab=97.59 E-value=0.00035 Score=58.66 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=66.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++|++|+++|+ ++||+. .......++.+|+...++.|+++. ...
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-----------------------~~~ 100 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-----------------------FAA 100 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-----------------------HHH
Confidence 578999999999999886 899987 444445567889877777887753 245
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
...+++.+....+.++++++..+.+.++.+|+.++.
T Consensus 101 ~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 101 AAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred HHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 566666666444568888888899999999998765
No 178
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.57 E-value=0.00042 Score=49.76 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=29.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChH---------------HHHHHHHhcCcccccceeEecc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---------------HAITCLKRLEIADCFDQIICFE 137 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~---------------~~~~~l~~~gl~~~f~~i~~~~ 137 (256)
.+.+++.+.+++|+++|+ ++|+.... .+...|.+.++. +|.++.+.
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 455667777777776664 66766443 445677777775 67777644
No 179
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.54 E-value=0.00021 Score=68.18 Aligned_cols=131 Identities=13% Similarity=0.122 Sum_probs=86.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc--cCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~Kp~~~~~~ 164 (256)
++.|++++.++.|++.|+ ++|+.....+..+.+.+|+.. +.++++.+.....- ..........+.+-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 778999999999999997 899999999999999999952 23333332211000 00000000122344556666
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee--CCcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~--~~~~el~~~l 223 (256)
.+.+.++-.-+.+.|+||+.||..+.+.+.++.++- .+. .+..+|.++ +++..+...+
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 666666655567999999999999999999887765 332 345688876 4455554443
No 180
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.52 E-value=0.00035 Score=66.64 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=86.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc--cCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~Kp~~~~~~ 164 (256)
+|.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.. +.++++.+.....- ..........+.+-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 678999999999999997 899999999999999999952 33444443221000 00000000122344556666
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC--CcCchHHh
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE--NVNNLPQV 222 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~--~~~el~~~ 222 (256)
.+.+.++-..+.+.|+||+.||..+.+.+.++.++- .+. .+..+|.++- ++..+.+.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH
Confidence 666666655567899999999999999999988765 332 3456787774 34444443
No 181
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.34 E-value=0.00076 Score=65.25 Aligned_cols=133 Identities=11% Similarity=0.023 Sum_probs=85.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc------------------------ceeEecccCCcc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF------------------------DQIICFETMNPN 142 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f------------------------~~i~~~~~~~~~ 142 (256)
+|.|++++.++.|++.|+ ++|+.....+..+.+.+|+.+-- ..++++......
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 678999999999999997 89999999999999999984210 023333322110
Q ss_pred cccCCC--C--CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCC-
Q 025190 143 LSKATR--P--DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALEN- 215 (256)
Q Consensus 143 ~~~~~~--~--~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~- 215 (256)
.-.... . .....+++-.|+--..+.+.++-....+.++||+.||+.+.+.+.++.++-..+. .+..+|+++.+
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC
Confidence 000000 0 0001334445555555666555444578999999999999999999887653332 34567888766
Q ss_pred -cCchHHh
Q 025190 216 -VNNLPQV 222 (256)
Q Consensus 216 -~~el~~~ 222 (256)
+..+.+.
T Consensus 728 ~f~~Iv~a 735 (997)
T TIGR01106 728 NFASIVTG 735 (997)
T ss_pred CHHHHHHH
Confidence 5555443
No 182
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.30 E-value=0.00044 Score=64.92 Aligned_cols=120 Identities=10% Similarity=0.066 Sum_probs=79.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc-CC-------CCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK-AT-------RPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~-~~-------~~~~~~~~~Kp 158 (256)
+|.|++++.++.|++.|+ ++|+.....++.+.+++|+.+. ++++++....... .. .......+.+-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 788999999999999997 8999999999999999999641 2222211100000 00 00000122344
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL 213 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~ 213 (256)
.|+--..+.+.++-.-+.+.|+||+.||..+.+.+.++.++- .+. .+..+|.++
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivL 574 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVL 574 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEE
Confidence 455566666666655677999999999999999999887764 332 234566665
No 183
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.00025 Score=52.42 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=68.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
+......++...|..+++..- .+|.......+..-..+...+ .+|.+...+. +.|
T Consensus 69 ke~l~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~----------------h~K------ 126 (194)
T COG5663 69 KEALLAQLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL----------------HHK------ 126 (194)
T ss_pred HHHHHHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc----------------ccc------
Confidence 334556678888888887653 566665554444333332222 2444332111 123
Q ss_pred HHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCCCCCC---eeeCCcCchHHhHHHHH
Q 025190 164 KLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNVGEAD---YALENVNNLPQVVPEIW 227 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~~~~~---~~~~~~~el~~~l~~~~ 227 (256)
..+.+.++++ +++.|+. |-.+.|+.+|++.+.++.+.....++ ..+..+.+..+++...+
T Consensus 127 V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~ 190 (194)
T COG5663 127 VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRL 190 (194)
T ss_pred chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHh
Confidence 2567778885 6999999 56888888999999999877554332 22344444445554433
No 184
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.03 E-value=0.0014 Score=56.12 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=85.5
Q ss_pred hhhHhhhhhcCCCCCCCCCChhH--HHHHHhhhcCcE---EEecC--ChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 73 ADDYHGFVHGRLPYDLIKPDPQL--RNLLCSITQRKI---IFTNS--DRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~pg~--~~~l~~l~~~~~---ivs~~--~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
+..+.+...-.+..+...++|.. .++.+++.+.+. ++|+- +.+..+..|...|.+-.--.++.+.....
T Consensus 80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl---- 155 (635)
T COG5610 80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL---- 155 (635)
T ss_pred cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh----
Confidence 33444444333334555566655 478899988774 78876 66777889999887644344666655554
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEE
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLV 200 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v 200 (256)
.|.....|+.+++..++++...+++||+. .|..+++++|+.+...
T Consensus 156 ----------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 156 ----------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred ----------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 58888999999999999999999999999 7999999999988654
No 185
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.03 E-value=0.0013 Score=63.09 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc--ceeEecccCCccccc--CCCCCCCCCCCCCCHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSK--ATRPDEFPVLLKPSMD 161 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~ 161 (256)
-+|.|++++.++.|++.|+ .+|+....-+..+.+..|+..-- +.++++.......-. -........+++-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 3789999999999999997 89999999999999999976544 336666554321000 0011122345566666
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
--.++.+.++=.-.-+.|+||+.||..+.+.|.++..+...+.
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gt 668 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT 668 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHH
Confidence 6666766666656678999999999999999999988776543
No 186
>PLN02382 probable sucrose-phosphatase
Probab=96.89 E-value=0.00091 Score=58.29 Aligned_cols=49 Identities=10% Similarity=-0.020 Sum_probs=41.8
Q ss_pred CCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCccccHHHHHcC-CeEEEEc
Q 025190 153 PVLLKPSMDAMKLALHVA---NVDPRHALFLDDNIKNVTAGKALG-LRTVLVG 201 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~G-~~~v~v~ 201 (256)
+..+-.|..+++++++++ |+++++++++||+.||++|.+.+| .+.++-+
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 334566789999999999 999999999999999999999999 5666544
No 187
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.88 E-value=0.006 Score=54.72 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+ ++ .-.|+--..
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~---------------------~~~p~~K~~ 397 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA---------------------RVTPEEKAA 397 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee---------------------ccCHHHHHH
Confidence 3788999999999999886 8999999999999999986 11 112233334
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQ 221 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~ 221 (256)
+.++++-....+.++||+.||..+.+.++.+.++. ....+|.++.+ .++..
T Consensus 398 ~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~~~adivl~~-~~l~~ 448 (499)
T TIGR01494 398 LVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AKAAADIVLLD-DNLST 448 (499)
T ss_pred HHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hHHhCCeEEec-CCHHH
Confidence 44444333467999999999999999998775543 34457888775 44443
No 188
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=96.79 E-value=0.0092 Score=50.06 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=56.1
Q ss_pred EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIK 185 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~ 185 (256)
+||+....-.-..+=..||...| +.|+++...| |. ..|++|.+++|- ...-++|||+..
T Consensus 375 lvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG----------------Ke--scFerI~~RFg~-K~~yvvIgdG~e 435 (468)
T KOG3107|consen 375 LVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG----------------KE--SCFERIQSRFGR-KVVYVVIGDGVE 435 (468)
T ss_pred EEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc----------------HH--HHHHHHHHHhCC-ceEEEEecCcHH
Confidence 67776444444444445666655 5688776654 44 889999999997 456789999999
Q ss_pred ccHHHHHcCCeEEEEcC
Q 025190 186 NVTAGKALGLRTVLVGK 202 (256)
Q Consensus 186 Di~~a~~~G~~~v~v~~ 202 (256)
.-.+|++..|++.-+..
T Consensus 436 ee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 436 EEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHhhCCceEeecc
Confidence 99999999999887753
No 189
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.78 E-value=0.012 Score=43.80 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=52.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHH---HHHHHhc-----CcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKRL-----EIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~---~~~l~~~-----gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
...||+.++++.++++|+ .+|....-.. +..|..+ ++.+ -.++.+-+.....+.+ + ...+
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~--Gpv~~sP~~l~~al~r----E---vi~~ 97 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD--GPVLLSPDSLFSALHR----E---VISK 97 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC--CCEEECCcchhhhhhc----c---cccc
Confidence 456789999999999987 6777754443 4445544 2221 1122221110000000 0 0123
Q ss_pred CHHHHHHH-----HHHcCCCC-CcEEEEcCCccccHHHHHcCCe
Q 025190 159 SMDAMKLA-----LHVANVDP-RHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 159 ~~~~~~~~-----~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+|+.|+.. .+.+.-.. .=...+|++.+|+.+=+++|+.
T Consensus 98 ~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 98 DPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44555543 22222111 1245799999999999999997
No 190
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=96.70 E-value=0.0074 Score=47.79 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIK 185 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~ 185 (256)
+||++.-...-...=.++++.+| +.|+++-.++ |. ..|++|.+++|-+...-++|||+..
T Consensus 180 LVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----------------K~--~cFe~I~~Rfg~p~~~f~~IGDG~e 241 (274)
T TIGR01658 180 LVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG----------------KL--QCFKWIKERFGHPKVRFCAIGDGWE 241 (274)
T ss_pred EEEcCccHHHHHHHHHhccCCccccccccchhhcc----------------hH--HHHHHHHHHhCCCCceEEEeCCChh
Confidence 88888655554455556787877 5688876653 54 8899999999998889999999999
Q ss_pred ccHHHHHcCCeEEEEcC
Q 025190 186 NVTAGKALGLRTVLVGK 202 (256)
Q Consensus 186 Di~~a~~~G~~~v~v~~ 202 (256)
.-.+|+..+++++-++.
T Consensus 242 Ee~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 242 ECTAAQAMNWPFVKIDL 258 (274)
T ss_pred HHHHHHhcCCCeEEeec
Confidence 99999999999998864
No 191
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.68 E-value=0.0032 Score=59.11 Aligned_cols=68 Identities=19% Similarity=0.147 Sum_probs=54.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCC--eEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGL--RTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~--~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+-.|..+++.+++ +++++.++++||+.||+.|.+.++. .++.++ .....+++++.+..++..+|+.+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG--~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVG--PGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEEC--CCCCcceEeCCCHHHHHHHHHHHh
Confidence 4567789999998 7788999999999999999999743 334443 356779999999999888887654
No 192
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.63 E-value=0.014 Score=57.06 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=82.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccC---------------Cc----------
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETM---------------NP---------- 141 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~---------------~~---------- 141 (256)
++.|++.+.++.|++.|+ ++|+....-+..+.+..|+.+--+.++..+.. ..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 688999999999999997 89999999999999999985322222211100 00
Q ss_pred c------------------cccC---------------CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccH
Q 025190 142 N------------------LSKA---------------TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVT 188 (256)
Q Consensus 142 ~------------------~~~~---------------~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~ 188 (256)
. ...| ........+++-.|+--..+.+.++-.-..+.|+||+.||..
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 0 0000 000011233344555555666665554567999999999999
Q ss_pred HHHHcCCeEEEEcCCCCCCCCCeee--CCcCchHHhH
Q 025190 189 AGKALGLRTVLVGKTVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 189 ~a~~~G~~~v~v~~~~~~~~~~~~~--~~~~el~~~l 223 (256)
+.++|.++.++.... ....++++. +++..+...+
T Consensus 816 ALK~AdVGIam~~~d-as~AA~f~l~~~~~~~I~~~I 851 (1054)
T TIGR01657 816 ALKQADVGISLSEAE-ASVAAPFTSKLASISCVPNVI 851 (1054)
T ss_pred HHHhcCcceeecccc-ceeecccccCCCcHHHHHHHH
Confidence 999998888776432 223456663 3444444444
No 193
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.53 E-value=0.0068 Score=55.95 Aligned_cols=124 Identities=10% Similarity=0.075 Sum_probs=85.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc----eeEecccCCcc--cccCCCCCCCCCCCCCCH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD----QIICFETMNPN--LSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~~--~~~~~~~~~~~~~~Kp~~ 160 (256)
+|.|++++.++.|++.|+ .+|+...+-++.+.+.+|+...-+ ..+++...... ..-.-.+....++.+-.|
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 899999999999999998 899999999999999999765444 34444332210 000001112233344455
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL 213 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~ 213 (256)
.--.++.+.++-.-+=+.|-||+.||-.+.+.+.++.++--.+. .+..+|.+.
T Consensus 664 ~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL 718 (972)
T KOG0202|consen 664 QHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVL 718 (972)
T ss_pred hhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEE
Confidence 66667777776666678899999999999999999988774443 334455554
No 194
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.50 E-value=0.0034 Score=61.30 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=81.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce----------------------------------
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ---------------------------------- 132 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 132 (256)
++.||+.+.++.|++.|+ ++|+...+-+..+....|+-+--..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 788999999999999997 8999888888888877776432111
Q ss_pred -------eEecccCCccc-------ccC-CCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCe
Q 025190 133 -------IICFETMNPNL-------SKA-TRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 133 -------i~~~~~~~~~~-------~~~-~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+++++....-+ |.. .........++-.|.--..+.+.++-. ...+.++||+.||+.|.+.|.++
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 22222111000 000 000000123333334333444443332 45799999999999999999877
Q ss_pred EEEEcCCC--CCCCCCeeeCCcCchHHhH
Q 025190 197 TVLVGKTV--NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 197 ~v~v~~~~--~~~~~~~~~~~~~el~~~l 223 (256)
....+... ....+|+++.++..|..+|
T Consensus 791 Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 791 VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 73333221 2356999998877766654
No 195
>PLN02580 trehalose-phosphatase
Probab=96.46 E-value=0.0089 Score=51.24 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEcCCccccHHHHHc-----CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRH---ALFLDDNIKNVTAGKAL-----GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~---~i~vGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+-.|..+++++++.++++..+ .++|||..+|..+.+.+ |+. |.+..+.....|.|.+.+..++.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 346779999999999987653 38999999999999963 544 445544456678999999999999998764
No 196
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.23 E-value=0.15 Score=40.02 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCC-CCCc-EEEEcCCccccHHHHHcCCeEE
Q 025190 161 DAMKLALHVANV-DPRH-ALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 161 ~~~~~~~~~~~~-~~~~-~i~vGDs~~Di~~a~~~G~~~v 198 (256)
.+.+.+++.+.. ...+ ++.+||++||+.+....-..++
T Consensus 194 ~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~Afi 233 (274)
T COG3769 194 QAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFI 233 (274)
T ss_pred HHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhhee
Confidence 667888887643 3344 8999999999999887655444
No 197
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=96.05 E-value=0.032 Score=40.27 Aligned_cols=165 Identities=10% Similarity=0.070 Sum_probs=90.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR 83 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (256)
+.|.+..|+|-||.|..+.|-..+. .....+++.... .|+...... ...-..+.....+-
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N------~y~D~~lk~~di----------~gwdik~yv----~~~~g~i~~il~ep 61 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN------IYKDKLLKMSDI----------KGWDIKNYV----KPECGKIYDILKEP 61 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh------hccccCcChHhh----------cccchhhcc----CccCCeeeeeccCc
Confidence 4588999999999887665544443 223333332111 111111000 00000122222221
Q ss_pred CCCCCCCCChhHHHHHHhhhcCc-E-EEecC--ChHH----HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 84 LPYDLIKPDPQLRNLLCSITQRK-I-IFTNS--DRNH----AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 84 ~~~~~~~~~pg~~~~l~~l~~~~-~-ivs~~--~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
-.+..+.+.|++.+.+++|.+.. + |||.. .... .+.+.+.+.+-++-..++|+.-.-.
T Consensus 62 ~fFRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnKniv-------------- 127 (180)
T COG4502 62 HFFRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNKNIV-------------- 127 (180)
T ss_pred chhhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCCCeE--------------
Confidence 12567789999999999999874 4 77765 3333 3455666677677777888542211
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
.--++|+|++..++..+. ++..+=.....+..--..+.++.|+.+.+
T Consensus 128 -------------------kaDilIDDnp~nLE~F~G--~kIlFdA~HN~nenRF~Rv~~W~e~eq~l 174 (180)
T COG4502 128 -------------------KADILIDDNPLNLENFKG--NKILFDAHHNKNENRFVRVRDWYEAEQAL 174 (180)
T ss_pred -------------------EeeEEecCCchhhhhccC--ceEEEecccccCccceeeeccHHHHHHHH
Confidence 124789999999887764 34333222222333445567777766443
No 198
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.01 E-value=0.037 Score=45.70 Aligned_cols=85 Identities=15% Similarity=0.130 Sum_probs=57.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCCh---HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++|+.|+++|+ ++||+.. ......++.+|+....+.++++. ...
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~-----------------------~~~ 74 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA-----------------------LCA 74 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH-----------------------HHH
Confidence 478899999999999885 8998653 33345678889875556676643 234
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
...+++......+++++|+.. -...++..|+..+
T Consensus 75 ~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 75 ARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred HHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 445555444456799999852 2445566787754
No 199
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.01 E-value=0.034 Score=43.18 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=57.3
Q ss_pred CCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccc--ccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
...|++.+||+.+.+.. + |-|.+....+..++..+++.. .+...+.-+.....-+...+ ......|+ +..
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~--~g~~~vKd----L~~ 118 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPR--RGKFDVKP----LGV 118 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeec--cCcEEEee----cHH
Confidence 56799999999999864 3 889999999999999987642 12222221211100000000 00011344 333
Q ss_pred HHHHcC--CCCCcEEEEcCCccccHHHHHcCCe
Q 025190 166 ALHVAN--VDPRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 166 ~~~~~~--~~~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+-+.++ .+.+++|+|+|++....+==..|+.
T Consensus 119 lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 119 IWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred hhhhcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 333454 3778999999999654433233443
No 200
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.97 E-value=0.064 Score=39.35 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=31.6
Q ss_pred CCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC
Q 025190 172 VDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 172 ~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
+.++++++|||++ .||.+|...|--.||..++...
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA 172 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence 5889999999999 8999999999999999877544
No 201
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=95.96 E-value=0.021 Score=50.14 Aligned_cols=86 Identities=10% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.+-||++|-+.+||+-|+ .+|+...--+..+.+..|+++|... ++| +--...
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe-----------------------atP--EdK~~~ 501 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE-----------------------ATP--EDKLAL 501 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc-----------------------CCh--HHHHHH
Confidence 556999999999999998 5666666666778888998765433 466 444556
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.++.+-.-.=+.|.||+.||..+..++..+.++.
T Consensus 502 I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 6666666666889999999999999998776655
No 202
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.71 E-value=0.019 Score=54.58 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=57.0
Q ss_pred CCCCCHHHHHHHHHH---cCCCCCcEEEEcCCccccHHHHHcCC-------------eEEEEcCCCCCCCCCeeeCCcCc
Q 025190 155 LLKPSMDAMKLALHV---ANVDPRHALFLDDNIKNVTAGKALGL-------------RTVLVGKTVNVGEADYALENVNN 218 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~G~-------------~~v~v~~~~~~~~~~~~~~~~~e 218 (256)
.+-.|..+++.+++. +|++++.+++|||..||..|.+.++- -+|.|+ .....|.+.+++..+
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~e 836 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAE 836 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHH
Confidence 355677889888754 68899999999999999999998862 334454 446778999999999
Q ss_pred hHHhHHHHHh
Q 025190 219 LPQVVPEIWV 228 (256)
Q Consensus 219 l~~~l~~~~~ 228 (256)
+.++|..+..
T Consensus 837 V~~lL~~L~~ 846 (854)
T PLN02205 837 IVRLMQGLAS 846 (854)
T ss_pred HHHHHHHHHh
Confidence 9999987663
No 203
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.52 E-value=0.028 Score=46.86 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=72.5
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCC----------CCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATR----------PDEF 152 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~----------~~~~ 152 (256)
+.-.|...+++++|+.+|. ++||++..++..-++.+ ...++||.|+.-.+ .++.|...+ ++..
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~-KP~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQAN-KPEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecC-CCcccccccCcchhhcccccchh
Confidence 3455788899999999885 99999999888766654 23367887665433 222333211 1000
Q ss_pred ------CCCCCC-CHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHH-HcCCeEEEEc
Q 025190 153 ------PVLLKP-SMDAMKLALHVANVDPRHALFLDDNI-KNVTAGK-ALGLRTVLVG 201 (256)
Q Consensus 153 ------~~~~Kp-~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~-~~G~~~v~v~ 201 (256)
...+|- ....+...++.-+....+++|+||.+ +|+.... +.|+++..+-
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 000110 11225566666778888999999999 8987776 8999987664
No 204
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.50 E-value=0.39 Score=38.59 Aligned_cols=116 Identities=10% Similarity=0.135 Sum_probs=61.6
Q ss_pred CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-eEecccCCc---c
Q 025190 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMNP---N 142 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~---~ 142 (256)
.++.+.+.....+ ..+.+.+|+.++++.|.++++ |.|.|-...++.++++.+.. ++. -+.++-+.. +
T Consensus 74 ~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~M~Fd~~g 147 (246)
T PF05822_consen 74 GLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNFMDFDEDG 147 (246)
T ss_dssp T-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTS
T ss_pred CcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeeeEEECCcc
Confidence 4566667666654 568899999999999999998 99999999999999998643 221 111111100 0
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHHc-CC-CCCcEEEEcCCccccHHHHHc
Q 025190 143 LSKATRPDEFPVLLKPSMDAMKLALHVA-NV-DPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 143 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~-~~-~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.-.|..+.-.....|.. ..+. -...+ .+ ...+++..||+..|+.|+..+
T Consensus 148 ~l~gF~~~lIH~~NKn~-~~l~-~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 148 VLVGFKGPLIHTFNKNE-SALE-DSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp BEEEE-SS---TT-HHH-HHHT-THHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred eEeecCCCceEEeeCCc-cccc-CchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 00001111111112221 1221 11111 23 457899999999999998877
No 205
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.44 E-value=0.041 Score=54.22 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=37.1
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCCcCchHHhH
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~~~el~~~l 223 (256)
.-+++|||+.||+.|.+.|.++.-..+... ....+|+.+..+.-|..+|
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHH
Confidence 458999999999999999977762222221 2356999999998887766
No 206
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.16 E-value=0.063 Score=44.02 Aligned_cols=14 Identities=43% Similarity=0.501 Sum_probs=12.2
Q ss_pred eEEEEecCCCccCC
Q 025190 6 NCLVFDLDDTLYPS 19 (256)
Q Consensus 6 k~viFD~DGTL~d~ 19 (256)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 57899999999875
No 207
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=93.74 E-value=0.18 Score=41.15 Aligned_cols=68 Identities=22% Similarity=0.261 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcC---CeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALG---LRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G---~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
..|...+++++++......-+++.||...|-.+.+.+. -.++-+..+ ...+++...........+..+
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~--~t~a~~~~~~~~~~~~~l~~~ 251 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG--STQAKFRLAGVYGFLRSLYKL 251 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC--cccccccccccHHHHHHHHHH
Confidence 34778889899888776667999999999977777665 445555544 333444444444444444433
No 208
>PLN02151 trehalose-phosphatase
Probab=93.72 E-value=0.18 Score=42.86 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHcCCCCC---cEEEEcCCccccHHHHHc-----CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDPR---HALFLDDNIKNVTAGKAL-----GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~---~~i~vGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.|..+++.+++.++.... -++|+||-.+|-.+.+.+ |+ .+.|+.......|.|.+.+..++.++|..+.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~ 345 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLV 345 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHH
Confidence 567889999999876433 289999999998777754 32 3455544445679999999999999998764
No 209
>PLN03017 trehalose-phosphatase
Probab=93.71 E-value=0.28 Score=41.95 Aligned_cols=70 Identities=17% Similarity=0.215 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHcCCCC---CcEEEEcCCccccHHHHHcC----CeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDP---RHALFLDDNIKNVTAGKALG----LRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~---~~~i~vGDs~~Di~~a~~~G----~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.|..+++.+++.++... .-.+|+||-.+|-.+.+.+. -..|.|+.......|.|.+.+..++.++|..+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~ 359 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLV 359 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHH
Confidence 56688999999988653 25899999999988877662 235666643445678999999999999998764
No 210
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.57 E-value=0.46 Score=38.50 Aligned_cols=112 Identities=11% Similarity=0.148 Sum_probs=65.2
Q ss_pred CCCChhHHHHHHhhhcCcE---EEec---CChHHHHHHHHhcCcccccceeEecccCCcccccCCC-CCCCCCCCCCCHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR-PDEFPVLLKPSMD 161 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~---~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~-~~~~~~~~Kp~~~ 161 (256)
-.++|++.+++++|+++|+ ++|| ...+.....++.+|+....+.++++...-..+..... .......+. .
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~---~ 92 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGE---E 92 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcC---h
Confidence 3567899999999999986 8997 4577778889999998767778887644321111100 001111112 2
Q ss_pred HHHHHHHHcCCC----CCcEEEEcCCc-cc---cHHH---HHcCCeEEEEcCC
Q 025190 162 AMKLALHVANVD----PRHALFLDDNI-KN---VTAG---KALGLRTVLVGKT 203 (256)
Q Consensus 162 ~~~~~~~~~~~~----~~~~i~vGDs~-~D---i~~a---~~~G~~~v~v~~~ 203 (256)
.+...++.+|+. ..+.|++|... .+ +..| .+.|...+..+..
T Consensus 93 ~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D 145 (249)
T TIGR01457 93 GLKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGD 145 (249)
T ss_pred hHHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCC
Confidence 355666666643 22456666543 22 2212 1347776655543
No 211
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=93.36 E-value=0.2 Score=42.52 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=32.0
Q ss_pred CCCCCHHHHHHHHHHcC----CCCCcEEEEcCC---------------ccccHHHHHcCCeEE
Q 025190 155 LLKPSMDAMKLALHVAN----VDPRHALFLDDN---------------IKNVTAGKALGLRTV 198 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~----~~~~~~i~vGDs---------------~~Di~~a~~~G~~~v 198 (256)
.+||...+..+..+.++ +.-..++++||- ..|+..|.++|+.+.
T Consensus 168 yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 168 YRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred ccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 38999999999988764 233445677763 247888999988764
No 212
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=93.20 E-value=4 Score=36.38 Aligned_cols=77 Identities=12% Similarity=-0.060 Sum_probs=43.0
Q ss_pred EEEecCChHHHHHHHHh-cCcccccceeEecccCC--cccccCCCCCCCCCCCCCCHHH-HHHHHHHcCCCCCcEEEEcC
Q 025190 107 IIFTNSDRNHAITCLKR-LEIADCFDQIICFETMN--PNLSKATRPDEFPVLLKPSMDA-MKLALHVANVDPRHALFLDD 182 (256)
Q Consensus 107 ~ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~--~~~~~~~~~~~~~~~~Kp~~~~-~~~~~~~~~~~~~~~i~vGD 182 (256)
+++|......++..++. +|.+.. ++.+-.- .++|+|.-. ++...+. ...+.+.++- ....+-+||
T Consensus 112 vVVTAsPrvmVEpFake~LG~D~V----vGTEL~v~~~G~~TG~~~------G~n~~ek~~~rl~~~~g~-~~~~vg~~~ 180 (498)
T PLN02499 112 VVVTRMPRVMVERFAKEHLRADEV----IGSELVVNRFGFATGFIR------GTDVDQSVANRVANLFVD-ERPQLGLGR 180 (498)
T ss_pred EEEeCCHHHHHHHHHHHhcCCceE----EeeeEEEeeccEEEEEEe------cCccHHHHHHHHHHHhCc-cCceecccC
Confidence 38999999999999998 886543 2221100 011222111 1111233 4445555663 345788999
Q ss_pred CccccHHHHHcC
Q 025190 183 NIKNVTAGKALG 194 (256)
Q Consensus 183 s~~Di~~a~~~G 194 (256)
+..|-....-|.
T Consensus 181 ~~~~~~f~~~ck 192 (498)
T PLN02499 181 ISASSSFLSLCK 192 (498)
T ss_pred CcccchhhhhCc
Confidence 887766665554
No 213
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.70 E-value=0.091 Score=41.01 Aligned_cols=27 Identities=30% Similarity=0.454 Sum_probs=18.0
Q ss_pred EEEEecCCCccCCC-ccHHHHHHHHHHH
Q 025190 7 CLVFDLDDTLYPSE-TGIAAAVKRNIEG 33 (256)
Q Consensus 7 ~viFD~DGTL~d~~-~~~~~~~~~~~~~ 33 (256)
+|+||+||||++.. ........+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999875 3444444454444
No 214
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=91.67 E-value=0.44 Score=44.98 Aligned_cols=36 Identities=28% Similarity=0.448 Sum_probs=26.1
Q ss_pred CCChhHHHHHHhhhcC-cE---EEecCChHHHHHHHHhcC
Q 025190 90 KPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLE 125 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~-~~---ivs~~~~~~~~~~l~~~g 125 (256)
.+-+.+.+.|+.|.+. |+ ++|+.....++..+..++
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~ 553 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLP 553 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 3446677888888873 43 899998888887776554
No 215
>PLN02580 trehalose-phosphatase
Probab=91.65 E-value=0.5 Score=40.76 Aligned_cols=36 Identities=8% Similarity=0.100 Sum_probs=26.7
Q ss_pred CCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhc
Q 025190 89 IKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRL 124 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~ 124 (256)
..+.|++.+.|+.|.+.. + |||+.....+...+...
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~ 177 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLT 177 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCC
Confidence 355667888888887664 3 99999999888777543
No 216
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.09 E-value=0.89 Score=42.78 Aligned_cols=121 Identities=12% Similarity=0.011 Sum_probs=71.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc--eeEecccCCcccccC-----CCCCCCCCCCCC-
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKA-----TRPDEFPVLLKP- 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~-----~~~~~~~~~~Kp- 158 (256)
+..||+++.++.|++.|+ .||+..-.-++.+...-|+-..-+ .++.+..... +... |.--..+-...|
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeecCCCc
Confidence 678999999999999998 899998888898888888654322 1222211110 0000 000000111122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALE 214 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~ 214 (256)
+...+-+.+.+.| +=+.+-||+.||-.+.+.|.++.++--.+ ..+...|.++-
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEE
Confidence 2222333333221 23456799999999999999887765433 34556777764
No 217
>PRK10444 UMP phosphatase; Provisional
Probab=90.57 E-value=1.1 Score=36.40 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=59.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHH---HHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~---~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++++.|+++|+ ++||+..... ...++.+|++---+.++++...-..+............+. ..+
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~---~~l 93 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGE---GAL 93 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcC---HHH
Confidence 568999999999999886 8999866544 4456667875444666666433211111100000111111 234
Q ss_pred HHHHHHcCCC----CCcEEEEcCCcc-cc---HHHH---HcCCeEEEEcCC
Q 025190 164 KLALHVANVD----PRHALFLDDNIK-NV---TAGK---ALGLRTVLVGKT 203 (256)
Q Consensus 164 ~~~~~~~~~~----~~~~i~vGDs~~-Di---~~a~---~~G~~~v~v~~~ 203 (256)
...++..|+. ..++|++|...+ +. ..|. +.|...+..+..
T Consensus 94 ~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D 144 (248)
T PRK10444 94 IHELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD 144 (248)
T ss_pred HHHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4444555543 235777887663 32 2221 347776665543
No 218
>PLN02151 trehalose-phosphatase
Probab=90.53 E-value=0.68 Score=39.47 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=24.0
Q ss_pred CCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLK 122 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~ 122 (256)
.+.|+..+.|+.|.+.. + |+|+.....+...+.
T Consensus 120 ~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 120 FMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 45677777888877542 2 899998888877764
No 219
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=90.06 E-value=2.1 Score=34.33 Aligned_cols=52 Identities=23% Similarity=0.178 Sum_probs=36.6
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHh-cCcccccceeEeccc
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKR-LEIADCFDQIICFET 138 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~-~gl~~~f~~i~~~~~ 138 (256)
..-.++|++.+.++.++++|+ ++||+. .......+.. +|+.--.+.++++..
T Consensus 11 ~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~ 69 (236)
T TIGR01460 11 LGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS 69 (236)
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH
Confidence 445679999999999998876 888764 3334444555 787655677777643
No 220
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.59 E-value=0.44 Score=38.84 Aligned_cols=49 Identities=14% Similarity=0.202 Sum_probs=37.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcCcccccceeEeccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCFDQIICFET 138 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~gl~~~f~~i~~~~~ 138 (256)
.++|++.++++.|+++|+ ++||+... .....++.+|++--.+.++++..
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~ 75 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAP 75 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHH
Confidence 478899999999999986 89987544 46667888898744566777653
No 221
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=88.48 E-value=1.2 Score=42.70 Aligned_cols=32 Identities=9% Similarity=0.208 Sum_probs=20.6
Q ss_pred ChhHHHHHHhh-hcCcE---EEecCChHHHHHHHHh
Q 025190 92 DPQLRNLLCSI-TQRKI---IFTNSDRNHAITCLKR 123 (256)
Q Consensus 92 ~pg~~~~l~~l-~~~~~---ivs~~~~~~~~~~l~~ 123 (256)
-|++.++|+.| +..+. |+|+.....++..+..
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35666777776 33332 7888877777776654
No 222
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=88.33 E-value=0.34 Score=38.81 Aligned_cols=18 Identities=39% Similarity=0.696 Sum_probs=14.1
Q ss_pred EEEEecCCCccCCCccHH
Q 025190 7 CLVFDLDDTLYPSETGIA 24 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~ 24 (256)
+|++|+||||++.+..+.
T Consensus 1 li~~DlDgTLl~~~~~~~ 18 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLA 18 (236)
T ss_pred CeEEeccccccCCHHHHH
Confidence 478999999998765443
No 223
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=87.70 E-value=1.9 Score=42.12 Aligned_cols=76 Identities=11% Similarity=0.091 Sum_probs=52.6
Q ss_pred hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCcc-ccHHHH
Q 025190 114 RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHA-LFLDDNIK-NVTAGK 191 (256)
Q Consensus 114 ~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~-i~vGDs~~-Di~~a~ 191 (256)
.+.++..|+..++.. ..+++.+.... ..++..-.+..++++++.++|++.+++ +++|||-+ |.+...
T Consensus 923 v~elr~~Lr~~gLr~--~~iys~~~~~L---------DVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll 991 (1050)
T TIGR02468 923 VKELRKLLRIQGLRC--HAVYCRNGTRL---------NVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLL 991 (1050)
T ss_pred HHHHHHHHHhCCCce--EEEeecCCcEe---------eeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh
Confidence 466777888888763 34555431111 334446678899999999999999999 55999998 988764
Q ss_pred HcCCeEEEE
Q 025190 192 ALGLRTVLV 200 (256)
Q Consensus 192 ~~G~~~v~v 200 (256)
.--.++|.+
T Consensus 992 ~G~~~tvi~ 1000 (1050)
T TIGR02468 992 GGLHKTVIL 1000 (1050)
T ss_pred CCceeEEEE
Confidence 444445544
No 224
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=87.32 E-value=1.3 Score=40.82 Aligned_cols=113 Identities=12% Similarity=0.250 Sum_probs=63.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh--cCcccccceeEecccCCcccccCCCCCCCCCCCCC--CHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR--LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP--SMDA 162 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~--~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp--~~~~ 162 (256)
.-..++..-|..|+.++. ++++.+.+..-...+. ..+-.-...++++ .+-| |+++
T Consensus 711 ~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~C------------------RctPtQKA~v 772 (1051)
T KOG0210|consen 711 TSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCC------------------RCTPTQKAQV 772 (1051)
T ss_pred CCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEE------------------ecChhHHHHH
Confidence 444567777788877643 5555555444333322 1121222334432 1333 3333
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--CCCCCeeeCCcCchHHhH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--VGEADYALENVNNLPQVV 223 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--~~~~~~~~~~~~el~~~l 223 (256)
...+.++-+ ..+.+|||+-||+.|...+..+.-.++...+ ...+|+-+..+.-+.++|
T Consensus 773 ~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 773 VRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence 333333333 6799999999999998777555444443333 356899988887776655
No 225
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=86.37 E-value=0.45 Score=38.40 Aligned_cols=16 Identities=31% Similarity=0.366 Sum_probs=13.4
Q ss_pred CCeEEEEecCCCccCC
Q 025190 4 PFNCLVFDLDDTLYPS 19 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~ 19 (256)
+.++++||+||||++.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 4578999999999974
No 226
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=86.21 E-value=6.6 Score=31.86 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=54.2
Q ss_pred CChhHHHHHHhhhcCc------E---EEecCChHHHHHHHH---hcCcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRK------I---IFTNSDRNHAITCLK---RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~------~---ivs~~~~~~~~~~l~---~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
|+....+-|.+++++- + +||..+....++.++ ..|+. +|..+.-. +-+
T Consensus 165 P~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg------------------G~~ 224 (264)
T PF06189_consen 165 PFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG------------------GLP 224 (264)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC------------------CCc
Confidence 4455555566665541 2 899886666566554 44554 55544322 334
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
|. .+++.++= -|+++|....++.|. .+.+++.|+++..
T Consensus 225 K~----~vL~~~~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 225 KG----PVLKAFRP----HIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred hh----HHHHhhCC----CEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 33 44555443 489999999999998 7888988887653
No 227
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=85.35 E-value=4.2 Score=31.89 Aligned_cols=46 Identities=17% Similarity=0.243 Sum_probs=32.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHH---HHHHhcCcccccceeEe
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAI---TCLKRLEIADCFDQIIC 135 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~---~~l~~~gl~~~f~~i~~ 135 (256)
...||+.+.++.|+.++. .+||...+.-+ +.|+++|++---+.|++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~t 74 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFT 74 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcC
Confidence 478999999999996654 89998655544 45667776533344554
No 228
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=84.36 E-value=4.7 Score=28.84 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=57.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC-ChHHHHHHHHhcCccc---------ccceeEecccCCcccccCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLEIAD---------CFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~-~~~~~~~~l~~~gl~~---------~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
..+..|++++..|..|+++|+ ++|++ ....+.+.|+.+.+.. .|+.+..++
T Consensus 41 ~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~---------------- 104 (144)
T KOG4549|consen 41 EEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGD---------------- 104 (144)
T ss_pred ceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecC----------------
Confidence 456788999999999999998 66766 4555677888776543 233333322
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKN 186 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~D 186 (256)
..+...|+.+-+..++...+..++.|-..+
T Consensus 105 ---gsklghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 105 ---GSKLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred ---cccchhHHHHhhccCcchhceeeecccccC
Confidence 334467788888889888888899887755
No 229
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=81.69 E-value=3.1 Score=39.81 Aligned_cols=72 Identities=11% Similarity=0.039 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHc------CCCCCcEEEEcCCc-cccHHHHHcCCeE------------------------------EEE
Q 025190 158 PSMDAMKLALHVA------NVDPRHALFLDDNI-KNVTAGKALGLRT------------------------------VLV 200 (256)
Q Consensus 158 p~~~~~~~~~~~~------~~~~~~~i~vGDs~-~Di~~a~~~G~~~------------------------------v~v 200 (256)
.|..+++.+++++ +-.++=++++||.. .|=.+.+.++-.. +.+
T Consensus 678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 757 (797)
T PLN03063 678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSC 757 (797)
T ss_pred ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEE
Confidence 4667788888765 23456688999975 4766666554211 222
Q ss_pred cCCCCCCCCCeeeCCcCchHHhHHHHHhc
Q 025190 201 GKTVNVGEADYALENVNNLPQVVPEIWVS 229 (256)
Q Consensus 201 ~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 229 (256)
.-|.....|.|.+++..|+.++|..+...
T Consensus 758 ~VG~~~s~A~y~l~~~~eV~~lL~~l~~~ 786 (797)
T PLN03063 758 AIGQARTKARYVLDSSNDVVSLLHKLAVA 786 (797)
T ss_pred EECCCCccCeecCCCHHHHHHHHHHHhcc
Confidence 22345677999999999999999887643
No 230
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=81.69 E-value=5.1 Score=33.84 Aligned_cols=87 Identities=17% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCCCCCChhHHHHHHhhhcC----cE---EEecCC---hHH-HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 86 YDLIKPDPQLRNLLCSITQR----KI---IFTNSD---RNH-AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~----~~---ivs~~~---~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
+..-.++||+.++++.|+.+ |+ ++||+. ... .+.+.+.+|+.--.+.++++.
T Consensus 12 ~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~----------------- 74 (321)
T TIGR01456 12 FRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH----------------- 74 (321)
T ss_pred ECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-----------------
Confidence 34557799999999999987 75 899885 333 333447888753334454421
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
......+++++ ..+++||.+. -...++.+|+..+.
T Consensus 75 ------~~~~~ll~~~~---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 75 ------SPYKSLVNKYE---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred ------HHHHHHHHHcC---CceEEEeChH-HHHHHHHcCCcccc
Confidence 23455555553 2688898764 46777788987653
No 231
>PLN03017 trehalose-phosphatase
Probab=81.67 E-value=1.6 Score=37.36 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=10.9
Q ss_pred CeEEEEecCCCcc
Q 025190 5 FNCLVFDLDDTLY 17 (256)
Q Consensus 5 ~k~viFD~DGTL~ 17 (256)
-.+|++|+||||+
T Consensus 111 ~~llflD~DGTL~ 123 (366)
T PLN03017 111 QIVMFLDYDGTLS 123 (366)
T ss_pred CeEEEEecCCcCc
Confidence 3567889999999
No 232
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.28 E-value=2.9 Score=33.67 Aligned_cols=103 Identities=9% Similarity=0.044 Sum_probs=58.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcC-cccccceeEecccCCcccccCCCC----CCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE-IADCFDQIICFETMNPNLSKATRP----DEFPVLLKP 158 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~----~~~~~~~Kp 158 (256)
..+.+..|+.+++..|+++++ +.|.+--..++.++++.. +.+ + .-+++.-... -+.+.-+ .-...+.|.
T Consensus 135 s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n-~k~vSN~~~F-~edg~l~gF~~~Lihtfnkn 211 (298)
T KOG3128|consen 135 SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-N-VKFVSNYMDF-DEDGNLCGFSQPLIHTFNKN 211 (298)
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-c-HHhhhhhhhh-cccchhhhhhHHHHHHHccc
Confidence 445667899999999999998 899998888888776543 332 1 1111111100 0000000 000001111
Q ss_pred CHHHHHHHHHHcCC--CCCcEEEEcCCccccHHHHHc
Q 025190 159 SMDAMKLALHVANV--DPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 159 ~~~~~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~ 193 (256)
...++...+.++. ...++++.||+.-|+.+|..+
T Consensus 212 -~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 212 -SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred -hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 1223333444432 467899999999999998765
No 233
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=80.77 E-value=4.1 Score=39.48 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=28.6
Q ss_pred CCCChhHHHHHHhhhcC--c-E-EEecCChHHHHHHHHhcC
Q 025190 89 IKPDPQLRNLLCSITQR--K-I-IFTNSDRNHAITCLKRLE 125 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~--~-~-ivs~~~~~~~~~~l~~~g 125 (256)
..|.|++.++|+.|.+. + + |||+.....++..+...+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 35678888899888764 3 2 999999999888887654
No 234
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=80.34 E-value=0.7 Score=28.46 Aligned_cols=25 Identities=8% Similarity=0.260 Sum_probs=15.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGK 191 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~ 191 (256)
+.+.++++|+ .|++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 4578888888 899999999998765
No 235
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=78.59 E-value=4.2 Score=33.35 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=35.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF 130 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f 130 (256)
.+.|.+.+.|++|+++|+ ++|+.....+...++.+|+..++
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 456789999999999986 89999999999999999987543
No 236
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=77.97 E-value=1.7 Score=34.74 Aligned_cols=61 Identities=21% Similarity=0.227 Sum_probs=30.7
Q ss_pred CCCCHHHHHHHHHHcCCC---CCcEEEEcCCccccHHHHHcCCe-----EEEEcCC---CCCCCCCeeeCCc
Q 025190 156 LKPSMDAMKLALHVANVD---PRHALFLDDNIKNVTAGKALGLR-----TVLVGKT---VNVGEADYALENV 216 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~---~~~~i~vGDs~~Di~~a~~~G~~-----~v~v~~~---~~~~~~~~~~~~~ 216 (256)
...|..++++++++++.. +.-++++||...|-.+.+.+.-. .+.|... .....|.|.+++.
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 344778999999998875 67899999999998888886543 4555543 2445677766653
No 237
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=77.00 E-value=4.7 Score=34.54 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHHc----CCCCCcEEEEcCCc-----cccHHHHHcCCeEEEEcCCC
Q 025190 158 PSMDAMKLALHVA----NVDPRHALFLDDNI-----KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 158 p~~~~~~~~~~~~----~~~~~~~i~vGDs~-----~Di~~a~~~G~~~v~v~~~~ 204 (256)
.|...+..+.+.+ ++.++++++|||-. ||+.+-..+ .++|+.++.
T Consensus 349 dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfkaR~a~--~t~WIasP~ 402 (408)
T PF06437_consen 349 DKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFKARLAC--TTAWIASPQ 402 (408)
T ss_pred CcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchhhhhhc--eeeEecCHH
Confidence 3447777777777 89999999999964 676654433 788997764
No 238
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=76.97 E-value=1.7 Score=32.73 Aligned_cols=17 Identities=35% Similarity=0.649 Sum_probs=14.7
Q ss_pred CCeEEEEecCCCccCCC
Q 025190 4 PFNCLVFDLDDTLYPSE 20 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~ 20 (256)
.+|+|++|+|.||+..+
T Consensus 27 Gikgvi~DlDNTLv~wd 43 (175)
T COG2179 27 GIKGVILDLDNTLVPWD 43 (175)
T ss_pred CCcEEEEeccCceeccc
Confidence 57899999999999654
No 239
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=75.63 E-value=1.6 Score=37.92 Aligned_cols=64 Identities=11% Similarity=0.105 Sum_probs=34.3
Q ss_pred cCCCCCcEE-EEcCCccccHHHHHcCCeE---EEEcCCCCCCCCCe---eeCCcCchHHhHHHHHhcCCCC
Q 025190 170 ANVDPRHAL-FLDDNIKNVTAGKALGLRT---VLVGKTVNVGEADY---ALENVNNLPQVVPEIWVSQSDD 233 (256)
Q Consensus 170 ~~~~~~~~i-~vGDs~~Di~~a~~~G~~~---v~v~~~~~~~~~~~---~~~~~~el~~~l~~~~~~~~~~ 233 (256)
+.+.+...+ -+|....|+.+=+.+|++. .-++...+-...-. .-.++..+.+++..++...+..
T Consensus 489 lf~e~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~ 559 (580)
T COG5083 489 LFIEFDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPK 559 (580)
T ss_pred hhCcCChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCc
Confidence 344443333 6899999999999999873 22332211111111 2244455666666666555543
No 240
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=75.02 E-value=8.6 Score=31.27 Aligned_cols=39 Identities=13% Similarity=0.250 Sum_probs=33.5
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
.+-|...+.|++|+++|+ ++|++....+...++.+++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 456778899999999986 899999999999999998754
No 241
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=73.46 E-value=14 Score=32.00 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=70.2
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCc-cccc---------------CCCC
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNP-NLSK---------------ATRP 149 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~-~~~~---------------~~~~ 149 (256)
.+-...++..++..|. ++||+.-......+.++ +...+||.+++...-.. +-++ |-++
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~ 279 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT 279 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence 3334447777777774 89988777776666543 45568888776532111 0000 0111
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cc-cHHHHHcCCeEEEEcCCC
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KN-VTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~D-i~~a~~~G~~~v~v~~~~ 204 (256)
......+++++.....++..+++...+++++||+. .| +..-+.-|+.++.|-...
T Consensus 280 ~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL 336 (424)
T KOG2469|consen 280 GPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL 336 (424)
T ss_pred CcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence 12222344455667777788888888999999999 46 556677799988886543
No 242
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=71.98 E-value=6.7 Score=31.21 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=31.5
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
.|...+.|++|+++|+ ++|+.....+...++.+|+..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4568899999999986 889998898999999999864
No 243
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=71.60 E-value=7.5 Score=30.47 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=34.4
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
-.+.|...+.+++|+++|+ ++|++....++..++.+++..
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 3577889999999999986 899999999999999988763
No 244
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=70.63 E-value=9.3 Score=30.02 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=32.4
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
..+...+.|++|+++|+ ++|++....++..++.+++.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44458899999999986 99999999999999999986
No 245
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=70.49 E-value=21 Score=30.01 Aligned_cols=81 Identities=14% Similarity=0.072 Sum_probs=50.1
Q ss_pred CCCCChhHHHHHHhhhcCc---E-EEecCChHHHHHHHHhcCcc-------------cccceeEecccCCcccccCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRK---I-IFTNSDRNHAITCLKRLEIA-------------DCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~---~-ivs~~~~~~~~~~l~~~gl~-------------~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
.-.++||+..+.+.|.+.+ + .|||+.-.....+-+.++-. ..++.++.+...
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~----------- 262 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAA----------- 262 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhh-----------
Confidence 4478999999999998877 3 89998665554443333221 223444433322
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVT 188 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~ 188 (256)
.|...+..++..+. -.+.+.|||+- .|.+
T Consensus 263 -------rK~~~l~nil~~~p--~~kfvLVGDsGE~Dpe 292 (373)
T COG4850 263 -------RKGQSLRNILRRYP--DRKFVLVGDSGEHDPE 292 (373)
T ss_pred -------hcccHHHHHHHhCC--CceEEEecCCCCcCHH
Confidence 22244555666553 35789999998 7843
No 246
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=70.47 E-value=3 Score=31.35 Aligned_cols=16 Identities=50% Similarity=0.625 Sum_probs=13.5
Q ss_pred eEEEEecCCCccCCCc
Q 025190 6 NCLVFDLDDTLYPSET 21 (256)
Q Consensus 6 k~viFD~DGTL~d~~~ 21 (256)
+.+++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5799999999998753
No 247
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=70.00 E-value=5.9 Score=31.67 Aligned_cols=13 Identities=38% Similarity=0.508 Sum_probs=7.9
Q ss_pred EEecCCCccCCCc
Q 025190 9 VFDLDDTLYPSET 21 (256)
Q Consensus 9 iFD~DGTL~d~~~ 21 (256)
+||+||||.+...
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6899999997654
No 248
>PLN02382 probable sucrose-phosphatase
Probab=68.59 E-value=3 Score=36.60 Aligned_cols=14 Identities=36% Similarity=0.396 Sum_probs=11.7
Q ss_pred eEEEEecCCCccCC
Q 025190 6 NCLVFDLDDTLYPS 19 (256)
Q Consensus 6 k~viFD~DGTL~d~ 19 (256)
-+|+.|+||||++.
T Consensus 10 ~lI~sDLDGTLL~~ 23 (413)
T PLN02382 10 LMIVSDLDHTMVDH 23 (413)
T ss_pred EEEEEcCCCcCcCC
Confidence 45677999999986
No 249
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=68.13 E-value=11 Score=30.30 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=33.9
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
-.+-+...+.|++|+++|+ ++|++....+...++.+++.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3566889999999999986 89999999999999998876
No 250
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=67.93 E-value=11 Score=29.83 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=33.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
.+-|...+.|++|+++|+ ++|++....+...++.+++..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 456778899999999886 899999998998899998764
No 251
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=67.35 E-value=11 Score=30.77 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=34.5
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC 129 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~ 129 (256)
.+.|...+.|++|+++|+ ++|++....++..++.+++..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 567788999999999986 8999999999999999998643
No 252
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=66.85 E-value=4.5 Score=30.24 Aligned_cols=18 Identities=39% Similarity=0.403 Sum_probs=14.7
Q ss_pred CCeEEEEecCCCccCCCc
Q 025190 4 PFNCLVFDLDDTLYPSET 21 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~ 21 (256)
+...+++|+|.||+.+..
T Consensus 5 ~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CceEEEEeCCCCcccccc
Confidence 446789999999998864
No 253
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=66.47 E-value=11 Score=30.56 Aligned_cols=41 Identities=12% Similarity=0.255 Sum_probs=36.0
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
...+.|.+.+.|++++++|+ ++|++....+...++.+++..
T Consensus 18 ~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 18 NKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 34477889999999999987 899999999999999999875
No 254
>PRK10976 putative hydrolase; Provisional
Probab=63.89 E-value=14 Score=30.02 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=33.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
.+-|...+.|++++++|+ ++|++....+...++.+++..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 466778899999999986 899999999999999998764
No 255
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=63.72 E-value=62 Score=26.21 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=66.4
Q ss_pred CCCCChhHHHHHHhhhcC---cE--E-EecCChHHHHHHHHhcCcccccc--eeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQR---KI--I-FTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~---~~--i-vs~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
.-.++|+..+.++..+.. |+ + +++.+....+.+ ..+|-.-.-- .-++++ .+-.+
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l-~~~G~~~vmPlg~pIGsg-----------------~Gi~~ 163 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRL-EDAGCAAVMPLGSPIGSG-----------------QGLLN 163 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HHcCCCEeCCCCcCCCCC-----------------CCCCC
Confidence 346778888888777765 87 4 677777766654 4445432100 112211 13445
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCc---cccHHHHHcCCeEEEEcCCCCC-CCCCeeeC
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNI---KNVTAGKALGLRTVLVGKTVNV-GEADYALE 214 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~---~Di~~a~~~G~~~v~v~~~~~~-~~~~~~~~ 214 (256)
++.++.+.+..++ .+++|-+. .|+..|..+|...|+++..... ..|..+..
T Consensus 164 ~~~I~~I~e~~~v----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~a~dP~~ma~ 218 (248)
T cd04728 164 PYNLRIIIERADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAKAKDPVAMAR 218 (248)
T ss_pred HHHHHHHHHhCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcCCCCHHHHHH
Confidence 7999988887544 35666655 6899999999999999887643 33444433
No 256
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=63.60 E-value=12 Score=30.30 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=29.5
Q ss_pred hHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 94 QLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 94 g~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
...+.++.|+++|+ ++|++....+...++.+|+.
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 46788899999886 89999999999999999975
No 257
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=63.47 E-value=18 Score=33.43 Aligned_cols=51 Identities=24% Similarity=0.348 Sum_probs=41.5
Q ss_pred CCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCccc-cc-ceeEeccc
Q 025190 88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIAD-CF-DQIICFET 138 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~-~f-~~i~~~~~ 138 (256)
.+++.|++.+||+++.+..- +.|-+.+.++..+++.+.-.. || |.|++.+.
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 45788999999999997643 999999999999999876543 55 67888665
No 258
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=62.58 E-value=8 Score=30.10 Aligned_cols=23 Identities=26% Similarity=0.478 Sum_probs=15.6
Q ss_pred EEEEecCCCccCCCccHHHHHHH
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKR 29 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~ 29 (256)
+++||+||||.........-..+
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~ 35 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLE 35 (252)
T ss_pred EEEEecCCccccccccCCHHHHH
Confidence 67899999998765543333333
No 259
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=62.25 E-value=15 Score=28.81 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=32.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
.+.|...+.|++|+++|+ ++|++....+...++.+++..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD 56 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 456778899999999986 889999999999999988643
No 260
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=61.63 E-value=14 Score=29.96 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=33.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
.+.|...+.|++++++|+ ++|++....+...++.+++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 466778899999999986 899999998999999998764
No 261
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=60.91 E-value=11 Score=32.71 Aligned_cols=41 Identities=20% Similarity=0.335 Sum_probs=25.7
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSE 43 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (256)
.++.+|-||+|+||......-..+..--+..+.....|.+.
T Consensus 25 ~~i~~~GfdmDyTL~~Y~~~~~esLay~~~~~~l~~~Gyp~ 65 (424)
T KOG2469|consen 25 ENIGIVGFDMDYTLARYNLPEMESLAYDLAQFLLKDKGYPN 65 (424)
T ss_pred hcCcEEeeccccchhhhcccchHHHHHHHHHHHHHhcCChh
Confidence 46789999999999976543322222214444556666654
No 262
>PTZ00445 p36-lilke protein; Provisional
Probab=60.89 E-value=3.7 Score=32.29 Aligned_cols=15 Identities=20% Similarity=0.277 Sum_probs=13.9
Q ss_pred CCeEEEEecCCCccC
Q 025190 4 PFNCLVFDLDDTLYP 18 (256)
Q Consensus 4 ~~k~viFD~DGTL~d 18 (256)
.+|+|++|+|.||+.
T Consensus 42 GIk~Va~D~DnTlI~ 56 (219)
T PTZ00445 42 GIKVIASDFDLTMIT 56 (219)
T ss_pred CCeEEEecchhhhhh
Confidence 579999999999998
No 263
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=60.45 E-value=10 Score=30.94 Aligned_cols=61 Identities=20% Similarity=0.329 Sum_probs=42.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCCc------cccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 163 MKLALHVANVDPRHALFLDDNI------KNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~------~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
=..++++++++ +++-=||- .=+++|+.+|++++++.++... .+..++.++.++.+++..++
T Consensus 189 n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 189 EKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQTI-PGVAIFDDISQLNQFVARLL 255 (256)
T ss_pred HHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCC-CCCccCCCHHHHHHHHHHhc
Confidence 34566667764 45554442 3389999999999999988642 33467788888888887643
No 264
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=60.17 E-value=53 Score=29.00 Aligned_cols=114 Identities=12% Similarity=0.165 Sum_probs=69.0
Q ss_pred hHHHHHHhhhcCcE--EEecCChHHHH---HHHHhcCcccccc-eeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 94 QLRNLLCSITQRKI--IFTNSDRNHAI---TCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 94 g~~~~l~~l~~~~~--ivs~~~~~~~~---~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
+..++++.+++.++ ++++.....+. ..++.+|+. +|. ...++. .--+....+.++
T Consensus 56 d~~~l~~~a~~~~iD~Vv~g~E~~l~~glad~~~~~Gip-~~Gp~~~aa~------------------le~dK~~~K~~l 116 (426)
T PRK13789 56 DKSSVQSFLKSNPFDLIVVGPEDPLVAGFADWAAELGIP-CFGPDSYCAQ------------------VEGSKHFAKSLM 116 (426)
T ss_pred CHHHHHHHHHHcCCCEEEECCchHHHHHHHHHHHHcCCC-cCCCHHHHHH------------------HHcCHHHHHHHH
Confidence 45566777777666 66655444433 345567763 221 101111 123456788899
Q ss_pred HHcCCCCCcEEEEcCCccc-cHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 168 HVANVDPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 168 ~~~~~~~~~~i~vGDs~~D-i~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+++|++..+...+.| ..+ ...++..|.+.|.-+.+.-..+--.++.+.+|+.+.+..++
T Consensus 117 ~~~gIpt~~~~~~~~-~~ea~~~~~~~~~PvVVKp~~~~~gkGV~vv~~~eel~~a~~~~~ 176 (426)
T PRK13789 117 KEAKIPTASYKTFTE-YSSSLSYLESEMLPIVIKADGLAAGKGVTVATEKKMAKRALKEIF 176 (426)
T ss_pred HHcCCCCCCeEeeCC-HHHHHHHHHhcCCCEEEEeCCCCCCCcEEEECCHHHHHHHHHHHH
Confidence 999998666555543 333 34456778887766665544555678888888888887765
No 265
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=60.14 E-value=10 Score=31.41 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=32.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHH---HhcCcc
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCL---KRLEIA 127 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l---~~~gl~ 127 (256)
..-.+.||+.+.++.|++.|. +|||++...-+..+ +++|+.
T Consensus 35 ~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 35 LGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred ecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 356899999999999999875 99999777666654 456665
No 266
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=60.07 E-value=11 Score=31.53 Aligned_cols=53 Identities=21% Similarity=0.281 Sum_probs=37.7
Q ss_pred CCCCCCCCCHHHHHHHHHHc--------CC-CCCcEEEEcCCc-cccHHHH---------------HcCCeEEEEcCC
Q 025190 151 EFPVLLKPSMDAMKLALHVA--------NV-DPRHALFLDDNI-KNVTAGK---------------ALGLRTVLVGKT 203 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~--------~~-~~~~~i~vGDs~-~Di~~a~---------------~~G~~~v~v~~~ 203 (256)
.....+||.+-.|.++.+.+ +. ++..+.+|||++ +|+..|. .-|+..|+|..+
T Consensus 265 ~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 265 RYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 34567899887776654432 22 567899999999 8999996 456667777544
No 267
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=59.51 E-value=58 Score=28.22 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+....+.+++++|++......+.|...-.+.+...|.+.+.-+...-...--.++.+..++.+.+..++
T Consensus 67 dK~~~k~~l~~~gIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~~gkGV~iv~~~~el~~a~~~~~ 135 (379)
T PRK13790 67 SKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMY 135 (379)
T ss_pred CHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHH
Confidence 446677899999998666666654333344556788887766655444455677888888888777655
No 268
>PRK00208 thiG thiazole synthase; Reviewed
Probab=58.82 E-value=87 Score=25.43 Aligned_cols=106 Identities=17% Similarity=0.172 Sum_probs=66.4
Q ss_pred CCCChhHHHHHHhhhcC---cE--E-EecCChHHHHHHHHhcCcccccc--eeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 89 IKPDPQLRNLLCSITQR---KI--I-FTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~---~~--i-vs~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
-..+|+..+.++..+.. |+ + +++.+....+. +..+|-.-.-- .-+++. .+-.++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~-l~~~G~~~vmPlg~pIGsg-----------------~gi~~~ 164 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKR-LEEAGCAAVMPLGAPIGSG-----------------LGLLNP 164 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHHcCCCEeCCCCcCCCCC-----------------CCCCCH
Confidence 35678888888777665 87 5 67777666664 44446432110 112211 133347
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc---cccHHHHHcCCeEEEEcCCCCC-CCCCeeeCCc
Q 025190 161 DAMKLALHVANVDPRHALFLDDNI---KNVTAGKALGLRTVLVGKTVNV-GEADYALENV 216 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~---~Di~~a~~~G~~~v~v~~~~~~-~~~~~~~~~~ 216 (256)
+.++.+.+..++ .+.+|-+. .|+..+..+|...|+++....+ ..|..+...+
T Consensus 165 ~~i~~i~e~~~v----pVIveaGI~tpeda~~AmelGAdgVlV~SAItka~dP~~ma~af 220 (250)
T PRK00208 165 YNLRIIIEQADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAVAGDPVAMARAF 220 (250)
T ss_pred HHHHHHHHhcCC----eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhCCCCHHHHHHHH
Confidence 888888887554 36666665 6899999999999999987653 3344444333
No 269
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=57.58 E-value=22 Score=29.63 Aligned_cols=40 Identities=15% Similarity=0.264 Sum_probs=34.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC 129 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~ 129 (256)
...+-+.+.|++|+++|+ ++|+.....+..+.+.+++..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 456678999999999987 8888899999999999998753
No 270
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=56.15 E-value=21 Score=34.13 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=28.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE 125 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~g 125 (256)
+|.+.+.+.+..++..|+ .||+....-++.+....|
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vg 628 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVG 628 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhhee
Confidence 678889999999999987 677766666666666666
No 271
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=55.61 E-value=12 Score=30.38 Aligned_cols=60 Identities=13% Similarity=0.252 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc---c--ccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNI---K--NVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~---~--Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~ 224 (256)
+.=..++++++++ +++-=||- . =+.+|+.+|++.+++.++.... +...+.+++++.++|+
T Consensus 184 e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 184 ELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPY-GDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHh
Confidence 3445567778874 55554443 2 2999999999999999886653 3333688888877764
No 272
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=55.16 E-value=60 Score=27.63 Aligned_cols=95 Identities=14% Similarity=0.078 Sum_probs=54.9
Q ss_pred HHHHHHhhhcC---cE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHH
Q 025190 95 LRNLLCSITQR---KI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169 (256)
Q Consensus 95 ~~~~l~~l~~~---~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 169 (256)
...+++.|++. +. ++|+........+++.+++..-++..+....... .+--...+..+.+.
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~ 81 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTL--------------GEITSNMLEGLEEL 81 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCH--------------HHHHHHHHHHHHHH
Confidence 34577888775 22 8888888878888888888643333332211100 12222223333332
Q ss_pred c-CCCCCcEEEEcCCccc---cHHHHHcCCeEEEEcCC
Q 025190 170 A-NVDPRHALFLDDNIKN---VTAGKALGLRTVLVGKT 203 (256)
Q Consensus 170 ~-~~~~~~~i~vGDs~~D---i~~a~~~G~~~v~v~~~ 203 (256)
+ ..+|+=++..||+..- ..+|+..|++.+.+..+
T Consensus 82 l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g 119 (365)
T TIGR00236 82 LLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAG 119 (365)
T ss_pred HHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCC
Confidence 2 2346667788897643 55677789998877543
No 273
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=54.61 E-value=16 Score=29.61 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCcc-----ccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIK-----NVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~-----Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+.=..++++++++ ++.-=||-. =+.+|+.+|++.+.+.++.... ...++.+++++.+++...+
T Consensus 180 e~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 180 ELERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPALPY-ADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHHHhh
Confidence 3344566778874 454444432 3899999999999999886533 2356788888888887643
No 274
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=53.52 E-value=44 Score=27.88 Aligned_cols=36 Identities=25% Similarity=0.255 Sum_probs=29.1
Q ss_pred CCCCCChhHHHHHHhhhcCc-E---EEecCChHHHHHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLK 122 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~-~---ivs~~~~~~~~~~l~ 122 (256)
...+++|...++++.+++.| + +|||+..+.+...+.
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~ 128 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELK 128 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc
Confidence 45688999999999999998 4 999998855554444
No 275
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.30 E-value=11 Score=23.45 Aligned_cols=26 Identities=4% Similarity=0.204 Sum_probs=21.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKA 192 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 192 (256)
+.+.++.+|+ ++++||...||++...
T Consensus 7 VqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 7 VQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 4577888887 8999999999998653
No 276
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=51.06 E-value=95 Score=25.89 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=51.6
Q ss_pred hhHHHHHHhhhcCcE---EEecCChHHH-HHHHHhcCc----------------------------ccccceeEecccCC
Q 025190 93 PQLRNLLCSITQRKI---IFTNSDRNHA-ITCLKRLEI----------------------------ADCFDQIICFETMN 140 (256)
Q Consensus 93 pg~~~~l~~l~~~~~---ivs~~~~~~~-~~~l~~~gl----------------------------~~~f~~i~~~~~~~ 140 (256)
||+..+-+.|++.|. ++|+.....+ +..++..++ ..-+|.+++-+..+
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~lIaIERpG 142 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQGVDKVEIPPFFPDDFAQAFLEADGLLKEPRPDLLIAIERPG 142 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhCcccccccccccccchhhhHHHHhhccccCCCCEEEEeCCcc
Confidence 688888777777665 7887643333 333333322 12356777777776
Q ss_pred cc---cccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHH
Q 025190 141 PN---LSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGK 191 (256)
Q Consensus 141 ~~---~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~ 191 (256)
.. .|-+-++-......-|--..|..+.+ .++ .++.|||+-|.+=|.+
T Consensus 143 ra~dG~Y~nmrG~~I~~~~a~~D~lf~~a~~-~gi---~tigIGDGGNEiGMG~ 192 (291)
T PF14336_consen 143 RAADGNYYNMRGEDISHLVAPLDDLFLAAKE-PGI---PTIGIGDGGNEIGMGN 192 (291)
T ss_pred cCCCCCEecCcCCcCccccccHHHHHHHhhc-CCC---CEEEECCCchhcccCh
Confidence 53 22222333333333343333333333 444 5899999998764443
No 277
>PRK08354 putative aminotransferase; Provisional
Probab=50.11 E-value=87 Score=26.04 Aligned_cols=85 Identities=6% Similarity=-0.082 Sum_probs=50.1
Q ss_pred hhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCC
Q 025190 93 PQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV 172 (256)
Q Consensus 93 pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 172 (256)
+++++.+.+.....+++|+|..+.+...+..+. . =|.++. ..|.-..+..+++.+|.
T Consensus 43 ~~l~~~ia~~~~~~I~vt~G~~~al~~~~~~~~-~--gd~vlv--------------------~~P~y~~~~~~~~~~g~ 99 (311)
T PRK08354 43 EWLEEEFSKLFGEPIVITAGITEALYLIGILAL-R--DRKVII--------------------PRHTYGEYERVARFFAA 99 (311)
T ss_pred HHHHHHHHHHHCCCEEECCCHHHHHHHHHHhhC-C--CCeEEE--------------------eCCCcHHHHHHHHHcCC
Confidence 444444444434457899998888776654332 1 255555 35555678889998887
Q ss_pred CCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 173 DPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 173 ~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+. +.++.....++.+.. +.+.+++..+.
T Consensus 100 ~~---~~~~~d~~~l~~~~~-~~~~vi~~~P~ 127 (311)
T PRK08354 100 RI---IKGPNDPEKLEELVE-RNSVVFFCNPN 127 (311)
T ss_pred EE---eecCCCHHHHHHhhc-CCCEEEEecCC
Confidence 54 455655555544433 34456665553
No 278
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=49.90 E-value=65 Score=31.11 Aligned_cols=36 Identities=11% Similarity=0.224 Sum_probs=28.0
Q ss_pred CCChhHHHHHHhhhcC--cE--EEecCChHHHHHHHHhcC
Q 025190 90 KPDPQLRNLLCSITQR--KI--IFTNSDRNHAITCLKRLE 125 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~--~~--ivs~~~~~~~~~~l~~~g 125 (256)
.|.|++.++|+.|.+. +. |||+.+.+.++..+...+
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 4667889999999764 32 999999999988887543
No 279
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=49.04 E-value=35 Score=27.86 Aligned_cols=38 Identities=5% Similarity=0.090 Sum_probs=32.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
.+.+...+.+++|+++|+ ++|++....+...++.+|++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 345678899999999987 89999999999999999975
No 280
>PRK00885 phosphoribosylamine--glycine ligase; Provisional
Probab=48.64 E-value=97 Score=27.14 Aligned_cols=68 Identities=10% Similarity=0.043 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccc-cHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~D-i~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+....+.+++++|++......+.+ ..+ ...+...|.+.|.-+.......--.++.+..|+.+.+...+
T Consensus 102 dK~~~k~~l~~~gip~p~~~~~~~-~~~~~~~~~~~~~P~VvKP~~~~gs~Gv~~v~~~~el~~~~~~~~ 170 (420)
T PRK00885 102 SKAFAKDFMARYGIPTAAYETFTD-AEEALAYLDEKGAPIVVKADGLAAGKGVVVAMTLEEAKAAVDDML 170 (420)
T ss_pred CHHHHHHHHHHcCCCCCCeEEeCC-HHHHHHHHHHcCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 446778899999997666666643 444 34456778887766544444445667788888888777655
No 281
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=47.21 E-value=39 Score=21.58 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
.-|-...++.+++++++++..+..|-+.--.|-.+..+|-
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 3466788999999999999988888777777888888863
No 282
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A.
Probab=47.20 E-value=71 Score=23.78 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCcccc-HHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHh
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNV-TAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di-~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
++..++.++++.|++.-+.+.+.+. .++ ..+...|.+.+.-+........-+.+.+..+|...+..+..
T Consensus 4 dK~~~~~~~~~~gv~~P~~~~~~~~-~~~~~~~~~~~~p~vvKp~~g~gs~gv~~~~~~~~l~~~~~~~~~ 73 (184)
T PF13535_consen 4 DKYRMRELLKKAGVPVPKTRIVDSE-EELRAFAEDLGFPFVVKPVDGSGSRGVFIVHSPEELEAALAEIRE 73 (184)
T ss_dssp CHHHHHHHHHHHTS----EEEECSH-HHHHHHHHHSSSSEEEEESS-STTTT-EEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCcCCCCEEEECCH-HHHHHHHHHcCCCEEEEcCccccCCCEEEeCCHHHHHHHHHHHHH
Confidence 4567888999999976667777654 454 44577787776665554555677788999999998876643
No 283
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=45.51 E-value=1.1e+02 Score=23.47 Aligned_cols=87 Identities=18% Similarity=0.178 Sum_probs=44.1
Q ss_pred hHHHHHHhhhcC--c--EEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHH
Q 025190 94 QLRNLLCSITQR--K--IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169 (256)
Q Consensus 94 g~~~~l~~l~~~--~--~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 169 (256)
-+..+++.|+++ + +++|..+....+...+.++ +.....+. +-..+..++.+++.
T Consensus 36 a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~--~~v~~~~~--------------------P~D~~~~~~rfl~~ 93 (186)
T PF04413_consen 36 AARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP--DRVDVQYL--------------------PLDFPWAVRRFLDH 93 (186)
T ss_dssp HHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G--GG-SEEE-----------------------SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC--CCeEEEEe--------------------CccCHHHHHHHHHH
Confidence 356788888876 3 3777665554544444432 22233332 34455788888886
Q ss_pred cCCCCCcEEEEcCCcc--ccHHHHHcCCeEEEEcCCC
Q 025190 170 ANVDPRHALFLDDNIK--NVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 170 ~~~~~~~~i~vGDs~~--Di~~a~~~G~~~v~v~~~~ 204 (256)
++ |+-++.++--.+ =+..+++.|++.++++...
T Consensus 94 ~~--P~~~i~~EtElWPnll~~a~~~~ip~~LvNarl 128 (186)
T PF04413_consen 94 WR--PDLLIWVETELWPNLLREAKRRGIPVVLVNARL 128 (186)
T ss_dssp H----SEEEEES----HHHHHH-----S-EEEEEE--
T ss_pred hC--CCEEEEEccccCHHHHHHHhhcCCCEEEEeeee
Confidence 64 677899988884 4899999999999997543
No 284
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=45.49 E-value=1.1e+02 Score=26.75 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccc-cHHHHHcCCe-EEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLR-TVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~D-i~~a~~~G~~-~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
-++...+.+++++|++......+.+ ..+ ...+...|.+ .+.-+.......--.++.+.+++.+.+..++
T Consensus 103 ~dK~~~k~~l~~~gIp~p~~~~~~~-~~~~~~~~~~~g~P~~VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~ 173 (423)
T TIGR00877 103 GSKAFAKDFMKRYGIPTAEYEVFTD-PEEALSYIQEKGAPAIVVKADGLAAGKGVIVAKTNEEAIKAVEEIL 173 (423)
T ss_pred CCHHHHHHHHHHCCCCCCCeEEECC-HHHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHH
Confidence 3557788899999998777666654 444 4556678887 5544433333344567788888877766554
No 285
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=45.12 E-value=24 Score=35.11 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=27.9
Q ss_pred CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--CCCCCeeeCCc
Q 025190 174 PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--VGEADYALENV 216 (256)
Q Consensus 174 ~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--~~~~~~~~~~~ 216 (256)
...+++|||+.||+.|...+.++.-..+.+.. .-.+|+-+..+
T Consensus 794 ~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqF 838 (1151)
T KOG0206|consen 794 KAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQF 838 (1151)
T ss_pred CceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHH
Confidence 35689999999999999987665432322222 23466665544
No 286
>PLN02257 phosphoribosylamine--glycine ligase
Probab=43.57 E-value=1.4e+02 Score=26.45 Aligned_cols=68 Identities=12% Similarity=0.034 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCcccc-HHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNV-TAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di-~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+....+.+++++|++......+. +..++ ..+...|.+.+.-..+.-..+--+++.+.+|+.+.+..++
T Consensus 102 dK~~~K~~l~~~GIptp~~~~~~-~~~e~~~~~~~~g~PvVVKp~~~~~GkGV~iv~~~~el~~a~~~~~ 170 (434)
T PLN02257 102 SKNFMKDLCDKYKIPTAKYETFT-DPAAAKKYIKEQGAPIVVKADGLAAGKGVVVAMTLEEAYEAVDSML 170 (434)
T ss_pred CHHHHHHHHHHcCCCCCCeEEeC-CHHHHHHHHHHcCCCEEEEcCCCCCCCCEEEECCHHHHHHHHHHHH
Confidence 45677889999999866655553 34443 3345678877766555545556778888888887776653
No 287
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=43.55 E-value=1.8e+02 Score=23.59 Aligned_cols=43 Identities=21% Similarity=0.267 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc--cccHHHHHcCCeEEEEc
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNI--KNVTAGKALGLRTVLVG 201 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~--~Di~~a~~~G~~~v~v~ 201 (256)
.-|-|..-+.++...|++ ||.|||.+ .+....+..|++-+.+.
T Consensus 72 a~PGP~~ARE~l~~~~iP---~IvI~D~p~~K~~d~l~~~g~GYIivk 116 (277)
T PRK00994 72 AAPGPKKAREILKAAGIP---CIVIGDAPGKKVKDAMEEQGLGYIIVK 116 (277)
T ss_pred CCCCchHHHHHHHhcCCC---EEEEcCCCccchHHHHHhcCCcEEEEe
Confidence 467778899999999984 89999999 46788888999987774
No 288
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=43.20 E-value=55 Score=26.24 Aligned_cols=35 Identities=14% Similarity=0.006 Sum_probs=26.0
Q ss_pred hhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 93 pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
|.+.+++++++++|+ ++|+.....++.+++.+++.
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLL 61 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCC
Confidence 345677777777774 78888888888888777764
No 289
>PRK07206 hypothetical protein; Provisional
Probab=42.06 E-value=2.2e+02 Score=24.71 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccccHH-HHHcCC---eEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHh
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKNVTA-GKALGL---RTVLVGKTVNVGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~-a~~~G~---~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
-++..++..++++|++.-....+. +..|+.. +...|. ++|.-+........-.++.+..||.+.+...+.
T Consensus 107 ~dK~~~r~~l~~~gi~~p~~~~~~-~~~e~~~~~~~~g~~~~P~VvKP~~g~gs~gv~~v~~~~el~~~~~~~~~ 180 (416)
T PRK07206 107 RNKAEMINALAEAGLPAARQINTA-DWEEAEAWLRENGLIDRPVVIKPLESAGSDGVFICPAKGDWKHAFNAILG 180 (416)
T ss_pred hCHHHHHHHHHHcCCCcccEEecC-CHHHHHHHHHhcCCCCCCEEEeCCCCCCCCCEEEeCCHHHHHHHHHHHHh
Confidence 466788899999999876666654 3455543 455676 666554443444566778888888887776653
No 290
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=41.82 E-value=36 Score=29.57 Aligned_cols=85 Identities=14% Similarity=0.145 Sum_probs=54.1
Q ss_pred CCCChhhHhhhhhcCCC--CCCCCCChhH-HHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcc
Q 025190 69 YDIGADDYHGFVHGRLP--YDLIKPDPQL-RNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN 142 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~--~~~~~~~pg~-~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~ 142 (256)
.+++++++...++++.. ..-+++.-|+ ++.++.+++.+- |||-+..-.+.+.+.+-.-++++...
T Consensus 135 ~~mt~d~~~~~ie~qa~dGVDfmTiH~Gi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~~~~~ENPlye~f--------- 205 (423)
T TIGR00190 135 EDMDEDDMFRAIEKQAKDGVDFMTIHAGVLLEYVERLKRSGRITGIVSRGGAILAAWMLHHHKENPLYKNF--------- 205 (423)
T ss_pred hhCCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHHHhCCCccCeecCcHHHHHHHHHHcCCcCchHHHH---------
Confidence 35677777776655332 2335667775 478888887553 89988877777666654333333221
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 025190 143 LSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 143 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
+.+..++++|.+ ++-.||+.
T Consensus 206 ------------------D~lLeI~~~yDV----tlSLGDgl 225 (423)
T TIGR00190 206 ------------------DYILEIAKEYDV----TLSLGDGL 225 (423)
T ss_pred ------------------HHHHHHHHHhCe----eeeccCCc
Confidence 345567777877 67888876
No 291
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=41.69 E-value=21 Score=34.18 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=25.9
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
--++|.||+.||+-+.+.+..+.+..+...
T Consensus 807 y~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 807 YVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 368999999999999999999988886543
No 292
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ....
Probab=39.98 E-value=91 Score=24.27 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCCCCCCCeeeCCcCchHHhHHHHHhc
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVNVGEADYALENVNNLPQVVPEIWVS 229 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 229 (256)
..-+.+++++|++-.+...+.|-..=....+..+.+. |.-.++....+--++..+..+..+.+.+++..
T Consensus 4 ~faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~~ViKadGla~GKGV~i~~~~~eA~~~l~~~~~~ 73 (194)
T PF01071_consen 4 SFAKEFMKRYGIPTAKYKVFTDYEEALEYLEEQGYPYVVIKADGLAAGKGVVIADDREEALEALREIFVD 73 (194)
T ss_dssp HHHHHHHHHTT-SB--EEEESSHHHHHHHHHHHSSSEEEEEESSSCTTTSEEEESSHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCCCCeeEECCHHHHHHHHHhcCCCceEEccCCCCCCCEEEEeCCHHHHHHHHHHhccc
Confidence 5678899999999888887776445566677788888 55556766666778889999999999998863
No 293
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=39.97 E-value=20 Score=23.47 Aligned_cols=16 Identities=38% Similarity=0.333 Sum_probs=13.4
Q ss_pred eEEEEecCCCccCCCc
Q 025190 6 NCLVFDLDDTLYPSET 21 (256)
Q Consensus 6 k~viFD~DGTL~d~~~ 21 (256)
-.++++-|||.+|++.
T Consensus 40 ~~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 40 LTLVLEEDGTAVDSED 55 (81)
T ss_pred eEEEEecCCCEEccHH
Confidence 4588999999998864
No 294
>PRK09932 glycerate kinase II; Provisional
Probab=39.78 E-value=1.4e+02 Score=26.07 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=52.1
Q ss_pred ChHHHHHHHHhcCccccc---ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccH
Q 025190 113 DRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVT 188 (256)
Q Consensus 113 ~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~ 188 (256)
...-++.+++..++++.+ |.|++++..-. ..+..+|- |..+.+.+++++++ |+.|.-+. .|..
T Consensus 265 l~~G~d~v~~~~~l~~~l~~ADlVITGEG~~D---------~Qt~~GK~-p~~Va~~A~~~~~P---vi~i~G~~~~~~~ 331 (381)
T PRK09932 265 IKPGIEIVLNAVNLEQAVQGAALVITGEGRID---------SQTAGGKA-PLGVASVAKQFNVP---VIGIAGVLGDGVE 331 (381)
T ss_pred EccHHHHHHHhcChHHHhccCCEEEECCCccc---------ccccCCcc-HHHHHHHHHHcCCC---EEEEecccCCChH
Confidence 445567788888887654 77998875432 44555662 36777788899986 66665555 6788
Q ss_pred HHHHcCCeEEEE
Q 025190 189 AGKALGLRTVLV 200 (256)
Q Consensus 189 ~a~~~G~~~v~v 200 (256)
.....|+..++-
T Consensus 332 ~~~~~g~~~~~~ 343 (381)
T PRK09932 332 VVHQYGIDAVFS 343 (381)
T ss_pred HHHhcCceEEEE
Confidence 899999887653
No 295
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=39.15 E-value=21 Score=23.19 Aligned_cols=16 Identities=31% Similarity=0.395 Sum_probs=13.3
Q ss_pred eEEEEecCCCccCCCc
Q 025190 6 NCLVFDLDDTLYPSET 21 (256)
Q Consensus 6 k~viFD~DGTL~d~~~ 21 (256)
-.++++-|||.+|++.
T Consensus 41 ~~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 41 VTLVLEEDGTVVDTEE 56 (78)
T ss_pred cEEEEeCCCCEEccHH
Confidence 4588999999998864
No 296
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=38.81 E-value=1.5e+02 Score=21.49 Aligned_cols=66 Identities=11% Similarity=0.105 Sum_probs=39.4
Q ss_pred cCCCCChhhHhhhhhcCCC------CCCCCCChhHHHHHHhhhcCcE----EEecCC-------hHHHHHHHHhcCcccc
Q 025190 67 LGYDIGADDYHGFVHGRLP------YDLIKPDPQLRNLLCSITQRKI----IFTNSD-------RNHAITCLKRLEIADC 129 (256)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~------~~~~~~~pg~~~~l~~l~~~~~----ivs~~~-------~~~~~~~l~~~gl~~~ 129 (256)
+|...+.+++.+...+.-. .......+.+.++++.|++.+. ++-++. .......++.+|
T Consensus 37 LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G---- 112 (137)
T PRK02261 37 LGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEKKFKEMG---- 112 (137)
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHHHHHHcC----
Confidence 3456666766665544211 1223556778888888888743 333332 355667888888
Q ss_pred cceeEec
Q 025190 130 FDQIICF 136 (256)
Q Consensus 130 f~~i~~~ 136 (256)
|+.+|..
T Consensus 113 ~~~vf~~ 119 (137)
T PRK02261 113 FDRVFPP 119 (137)
T ss_pred CCEEECc
Confidence 5677764
No 297
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=38.72 E-value=1.4e+02 Score=26.14 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=52.9
Q ss_pred CCChhHHHHHHhhhcCc-----EEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRK-----IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~-----~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
++-|++..+|++|--+. +.|.+|.......+|++ -||-|+..+.... ...+.
T Consensus 141 Els~n~a~~lakllp~Yld~~~~~VV~Ggv~ETt~LL~~-----rfD~IfyTGsp~V------------------gkIim 197 (477)
T KOG2456|consen 141 ELSPNTAKLLAKLLPQYLDQDLIRVVNGGVPETTELLKQ-----RFDHIFYTGSPRV------------------GKIIM 197 (477)
T ss_pred hcChhHHHHHHHHHHHhcCcceEEEecCCCchHHHHHHh-----hccEEEecCCchH------------------HHHHH
Confidence 45577777777765442 24444444445556655 3777765432221 13333
Q ss_pred HHHHHc------CCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCC
Q 025190 165 LALHVA------NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALEN 215 (256)
Q Consensus 165 ~~~~~~------~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~ 215 (256)
.++.++ .+--..-++|+|+. |++.+.+-=+...|.+++..--.|||+.-+
T Consensus 198 ~aAaKhLTPvtLELGGKsP~~vd~~~-d~~ia~~RI~~gk~~N~GQtCvapDYiL~~ 253 (477)
T KOG2456|consen 198 AAAAKHLTPVTLELGGKSPCYVDKNC-DLKIAARRIAWGKWMNSGQTCVAPDYILCS 253 (477)
T ss_pred HHHHhcCCcEEEEcCCCCCeeecCCc-CHHHHHHHHHHHhhccCCCeeccCCeEEec
Confidence 444432 12223446788877 655554432233345666555566666544
No 298
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=37.83 E-value=22 Score=22.89 Aligned_cols=16 Identities=31% Similarity=0.395 Sum_probs=13.2
Q ss_pred eEEEEecCCCccCCCc
Q 025190 6 NCLVFDLDDTLYPSET 21 (256)
Q Consensus 6 k~viFD~DGTL~d~~~ 21 (256)
-.|+++-|||.+|++.
T Consensus 39 ~~l~L~eDGT~VddEe 54 (74)
T smart00266 39 VTLVLEEDGTIVDDEE 54 (74)
T ss_pred cEEEEecCCcEEccHH
Confidence 3578999999998864
No 299
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=37.82 E-value=47 Score=29.05 Aligned_cols=84 Identities=18% Similarity=0.212 Sum_probs=53.9
Q ss_pred CCChhhHhhhhhcCCC--CCCCCCChhH-HHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccc
Q 025190 70 DIGADDYHGFVHGRLP--YDLIKPDPQL-RNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNL 143 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~--~~~~~~~pg~-~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~ 143 (256)
+++++++...++++.. ..-+++.-|+ ++.++.+++.+- |||-+..-.+.+.+.+-.-++++...
T Consensus 139 ~mt~d~~~~~ie~qa~~GVDfmTiHcGi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~~n~~ENPlye~f---------- 208 (431)
T PRK13352 139 DMTEDDLFDVIEKQAKDGVDFMTIHCGVTRETLERLKKSGRIMGIVSRGGSFLAAWMLHNNKENPLYEHF---------- 208 (431)
T ss_pred hCCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHHHhcCCccCeecCCHHHHHHHHHHcCCcCchHHHH----------
Confidence 5677777777665432 2345677775 478888887553 99998887777666544333333221
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
+.+..++++|.+ ++-.||+.
T Consensus 209 -----------------D~lLeI~~~yDV----tlSLGDgl 228 (431)
T PRK13352 209 -----------------DYLLEILKEYDV----TLSLGDGL 228 (431)
T ss_pred -----------------HHHHHHHHHhCe----eeeccCCc
Confidence 345567777777 67788876
No 300
>PRK06524 biotin carboxylase-like protein; Validated
Probab=37.55 E-value=1.8e+02 Score=26.40 Aligned_cols=120 Identities=8% Similarity=-0.039 Sum_probs=66.9
Q ss_pred CCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 169 (256)
.-.|++.++++.=-..+..+=-.....++.+++.+|+.=.....-.+. .--+....+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~fl~~DG~iQ~lLE~lGIpy~gP~a~asa------------------i~mDK~~tK~l~~~ 152 (493)
T PRK06524 91 LRHPETLEFIKRRGPGGKACFVMFDEETEALARQAGLEVMHPPAELRH------------------RLDSKIVTTRLANE 152 (493)
T ss_pred hcCHHHHHHHHhhCCCCceEEecCCHHHHHHHHHCCCeEECcCHHHHH------------------HhCCHHHHHHHHHH
Confidence 445666666655444444222233467888999999752122211111 12344677788899
Q ss_pred cCCCCCcEEEE-cCCccccH-HHHH--cCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 170 ANVDPRHALFL-DDNIKNVT-AGKA--LGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 170 ~~~~~~~~i~v-GDs~~Di~-~a~~--~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+|++....+.+ -++..++. .+.. .|.+++.-+...-...--..+.+..||...+...+
T Consensus 153 aGIPtpp~~~~~~~~~eel~~~~~~~~IGyPvVVKP~~GGSS~GV~~Vkn~eELe~a~~~~~ 214 (493)
T PRK06524 153 AGVPSVPHVLGRVDSYDELSALAHGAGLGDDLVVQTPYGDSGSTTFFVRGQRDWDKYAGGIV 214 (493)
T ss_pred cCCCCCCcccccCCCHHHHHHHHHhccCCCcEEEEECCCCCCcCEEEeCCHHHHHHHHHHhc
Confidence 99975554442 23333333 2333 78877655544334445667777777777665543
No 301
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=37.31 E-value=23 Score=28.96 Aligned_cols=92 Identities=15% Similarity=0.204 Sum_probs=59.3
Q ss_pred CCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCc-ccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEI-ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
+.-.|++.+||....+.. + +-|.+..+.+.+++..+.- ...+...+-.+.+.. ++ ..+.+
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~---------------~~--g~yvK 192 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTL---------------KD--GNYVK 192 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEe---------------EC--CcEEE
Confidence 456799999999998863 2 8888888999999988764 333433333222211 11 11112
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeE
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~ 197 (256)
-+...+.+.++++.|+|++.-..+=-..|++.
T Consensus 193 dls~~~~dL~~viIiDNsP~sy~~~p~NgIpI 224 (262)
T KOG1605|consen 193 DLSVLGRDLSKVIIVDNSPQSYRLQPENGIPI 224 (262)
T ss_pred EcceeccCcccEEEEcCChHHhccCccCCCcc
Confidence 22455667789999999997766666666664
No 302
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=36.20 E-value=1.6e+02 Score=21.11 Aligned_cols=14 Identities=14% Similarity=0.271 Sum_probs=11.8
Q ss_pred CCCeEEEEecCCCc
Q 025190 3 SPFNCLVFDLDDTL 16 (256)
Q Consensus 3 ~~~k~viFD~DGTL 16 (256)
+.+..|.||+.+||
T Consensus 43 ~~P~iV~FDmK~Tl 56 (128)
T PRK13717 43 NAPVTAAFNMKQTV 56 (128)
T ss_pred CCCeEEEEehHHHH
Confidence 35678999999999
No 303
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=35.50 E-value=2.8e+02 Score=23.61 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=64.0
Q ss_pred CCCCChhHHHHHHhhhcC---cE---EEecCChHHHHHHHHhcCcccccceeEe-cccCCcccccCCCCCCCCCCCCCCH
Q 025190 88 LIKPDPQLRNLLCSITQR---KI---IFTNSDRNHAITCLKRLEIADCFDQIIC-FETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~---~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~-~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
.-..+|+..+.++..+.. |+ ++++.+....+.+ ..+|-. .+-- .+..+. ..+-.+|
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l-~~~g~~----avmPl~~pIGs------------g~gv~~p 238 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRL-EDAGAV----AVMPLGAPIGS------------GLGIQNP 238 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HhcCCE----EEeeccccccC------------CCCCCCH
Confidence 346678888888777765 76 5677766666644 444431 0101 111111 0133378
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc---cccHHHHHcCCeEEEEcCCCC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNI---KNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~---~Di~~a~~~G~~~v~v~~~~~ 205 (256)
..++.+.+...+ -+.+|-+. +|+..|..+|...++++....
T Consensus 239 ~~i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 239 YTIRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred HHHHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 999999998554 46777776 699999999999999998864
No 304
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=35.35 E-value=99 Score=26.22 Aligned_cols=87 Identities=20% Similarity=0.291 Sum_probs=55.0
Q ss_pred CCCCCCChhHHHHHHhhhcC----cE---EEecCC----hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 86 YDLIKPDPQLRNLLCSITQR----KI---IFTNSD----RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~----~~---ivs~~~----~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
...-.+.||+.+.++.|.++ .+ ++||+. ...++++-+.+|..---|.++.+.
T Consensus 47 ~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSH----------------- 109 (389)
T KOG1618|consen 47 FRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSH----------------- 109 (389)
T ss_pred EecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhc-----------------
Confidence 45668999999999999876 33 899873 334455555667653334444332
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
.| |+.+.+ ...++++++|++ +--+.|+..|.+.|.
T Consensus 110 --sP----~r~l~~---~~~k~vLv~G~~-~vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 110 --SP----FRLLVE---YHYKRVLVVGQG-SVREVAEGYGFKNVV 144 (389)
T ss_pred --Ch----HHHHhh---hhhceEEEecCC-cHHHHhhccCcccee
Confidence 22 555552 233678999954 345667778887653
No 305
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=34.90 E-value=1.6e+02 Score=24.77 Aligned_cols=75 Identities=9% Similarity=0.055 Sum_probs=45.0
Q ss_pred EEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 025190 107 IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKN 186 (256)
Q Consensus 107 ~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~D 186 (256)
+++|+|..+.+...+..+ .+ +.++. ..|.-..+..+++..|.....+= +++...|
T Consensus 60 I~it~Gs~~~l~~~~~~~--~~--~~vv~--------------------~~P~y~~y~~~~~~~G~~v~~vp-~~~~~~~ 114 (332)
T PRK06425 60 VLIGPGLTHFIYRLLSYI--NV--GNIII--------------------VEPNFNEYKGYAFTHGIRISALP-FNLINNN 114 (332)
T ss_pred EEECCCHHHHHHHHHHHh--CC--CcEEE--------------------eCCChHHHHHHHHHcCCeEEEEe-CCcccCc
Confidence 489999888888777532 22 23333 23545678889999987543221 1222235
Q ss_pred cHHHHHcCCeEEEEcCCCCC
Q 025190 187 VTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 187 i~~a~~~G~~~v~v~~~~~~ 206 (256)
.+..++.+.+.+++.++.+.
T Consensus 115 ~~~l~~~~~k~v~l~nP~NP 134 (332)
T PRK06425 115 PEILNNYNFDLIFIVSPDNP 134 (332)
T ss_pred HHHHhhcCCCEEEEeCCCCC
Confidence 55555567777887665443
No 306
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=34.48 E-value=1.5e+02 Score=24.16 Aligned_cols=49 Identities=20% Similarity=0.337 Sum_probs=36.1
Q ss_pred CcEEEEcCCccc---cHHHHHcCCeEEEEc-CCCCCCCCCeeeCCcCchHHhH
Q 025190 175 RHALFLDDNIKN---VTAGKALGLRTVLVG-KTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 175 ~~~i~vGDs~~D---i~~a~~~G~~~v~v~-~~~~~~~~~~~~~~~~el~~~l 223 (256)
-++++|=|-..| |.-|+++|+++|.+- .......-|++++..++-..-+
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dpd~VD~~IP~Ndda~rsi 209 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDPDGVDYVIPGNDDAIRSI 209 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCCccCceeecCCChHHHHH
Confidence 368888888866 888999999988664 4445566889998888855433
No 307
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=33.93 E-value=81 Score=26.93 Aligned_cols=88 Identities=16% Similarity=0.136 Sum_probs=49.6
Q ss_pred hhhcC-cE----EEecCC--hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHc-CC
Q 025190 101 SITQR-KI----IFTNSD--RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA-NV 172 (256)
Q Consensus 101 ~l~~~-~~----ivs~~~--~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~-~~ 172 (256)
+|++. ++ ++|+.. ......+.+.+++ ...+..+..+. .. ..+--..++..+.+.+ ..
T Consensus 2 ~l~~~~~~~~~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~-~~-------------~~~~~~~~~~~~~~~~~~~ 66 (346)
T PF02350_consen 2 ALQKDPGFELILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDS-QS-------------MAKSTGLAIIELADVLERE 66 (346)
T ss_dssp HHHCSTTEEEEEEEECSS--CHHHHHHHHHTT---SEEEE--STT-S--------------HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhCCCCCEEEEEeCCCCCHHHHHHHHhhCCC-CCCCccccccc-ch-------------HHHHHHHHHHHHHHHHHhc
Confidence 45554 44 788876 7777878887777 55565555333 21 0222223333333333 23
Q ss_pred CCCcEEEEcCCccc---cHHHHHcCCeEEEEcCC
Q 025190 173 DPRHALFLDDNIKN---VTAGKALGLRTVLVGKT 203 (256)
Q Consensus 173 ~~~~~i~vGDs~~D---i~~a~~~G~~~v~v~~~ 203 (256)
+|+=+++.||+..= ..+|...+++.+-+..|
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 78889999999964 55666779999888655
No 308
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=33.51 E-value=67 Score=25.50 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=61.9
Q ss_pred CCCChhHH-HHHHhhhcCcE---EEecCChH-----HHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 89 IKPDPQLR-NLLCSITQRKI---IFTNSDRN-----HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 89 ~~~~pg~~-~~l~~l~~~~~---ivs~~~~~-----~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
..+.|++. ++.+.+++.|+ |+...... .++..++.+|+.-.|...+|+=+- .+
T Consensus 58 y~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL~~------------------~~ 119 (217)
T PF02593_consen 58 YGLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSLEE------------------NG 119 (217)
T ss_pred eccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccccCC------------------CC
Confidence 46778887 67777776665 66666555 788899999988778888875332 22
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
-..+...++.+|-+-=++..=+|...|+.-.+.+-.++-
T Consensus 120 ~p~i~~F~~~fGkP~~ei~v~~~~I~~V~VlR~aPCGsT 158 (217)
T PF02593_consen 120 NPQIDEFAEYFGKPKVEIEVENGKIKDVKVLRSAPCGST 158 (217)
T ss_pred ChhHHHHHHHhCCceEEEEecCCcEEEEEEEecCCCccH
Confidence 246777788888765555444455577776666654443
No 309
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=33.50 E-value=21 Score=32.92 Aligned_cols=55 Identities=11% Similarity=0.085 Sum_probs=35.9
Q ss_pred EEEEcCCccccHHHHHcCCeE--E-EEcC-CC-CCCCCCeeeCCcCchHHhHHHHHhcCC
Q 025190 177 ALFLDDNIKNVTAGKALGLRT--V-LVGK-TV-NVGEADYALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 177 ~i~vGDs~~Di~~a~~~G~~~--v-~v~~-~~-~~~~~~~~~~~~~el~~~l~~~~~~~~ 231 (256)
...+|.+.+|+-.=+++|++- | -++. ++ ......-...++.-|.+++..++....
T Consensus 653 YAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPplS 712 (738)
T KOG2116|consen 653 YAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPPLS 712 (738)
T ss_pred eeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCCcc
Confidence 457899999999999999974 2 3333 22 112222255677777888877775555
No 310
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=31.74 E-value=27 Score=22.83 Aligned_cols=16 Identities=31% Similarity=0.326 Sum_probs=13.1
Q ss_pred eEEEEecCCCccCCCc
Q 025190 6 NCLVFDLDDTLYPSET 21 (256)
Q Consensus 6 k~viFD~DGTL~d~~~ 21 (256)
-.|+++-|||.+|++.
T Consensus 43 ~~lvL~eDGT~VddEe 58 (80)
T cd06536 43 ITLVLAEDGTIVEDED 58 (80)
T ss_pred eEEEEecCCcEEccHH
Confidence 3578999999998864
No 311
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=31.68 E-value=31 Score=22.44 Aligned_cols=15 Identities=33% Similarity=0.346 Sum_probs=12.8
Q ss_pred EEEEecCCCccCCCc
Q 025190 7 CLVFDLDDTLYPSET 21 (256)
Q Consensus 7 ~viFD~DGTL~d~~~ 21 (256)
.|+++-|||.+|++.
T Consensus 42 ~lvL~eDGTeVddEe 56 (78)
T cd01615 42 TLVLEEDGTEVDDEE 56 (78)
T ss_pred EEEEeCCCcEEccHH
Confidence 488999999998864
No 312
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=31.48 E-value=85 Score=26.30 Aligned_cols=38 Identities=13% Similarity=0.200 Sum_probs=28.2
Q ss_pred HHHHHHHcC-CCCCcEEEEcCCccc-----cHHHHHcCCeEEEEc
Q 025190 163 MKLALHVAN-VDPRHALFLDDNIKN-----VTAGKALGLRTVLVG 201 (256)
Q Consensus 163 ~~~~~~~~~-~~~~~~i~vGDs~~D-----i~~a~~~G~~~v~v~ 201 (256)
+..+.+.+| +..-++.||||+ |+ +.++...|+....+.
T Consensus 141 l~Ti~E~~g~l~g~k~a~vGDg-NNv~nSl~~~~a~~G~dv~ia~ 184 (310)
T COG0078 141 LMTIKEHFGSLKGLKLAYVGDG-NNVANSLLLAAAKLGMDVRIAT 184 (310)
T ss_pred HHHHHHhcCcccCcEEEEEcCc-chHHHHHHHHHHHhCCeEEEEC
Confidence 445666676 577789999999 55 567788899876553
No 313
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=30.79 E-value=96 Score=27.25 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCcccc----HHHHHcCCeEEEE
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNV----TAGKALGLRTVLV 200 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di----~~a~~~G~~~v~v 200 (256)
...-+..+++++|--.+-+++|||++.|+ +++...|.....+
T Consensus 207 E~~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVv 252 (505)
T PF10113_consen 207 EMEEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVV 252 (505)
T ss_pred HHHHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEE
Confidence 44557778889988888999999999884 4555556665555
No 314
>PF03671 Ufm1: Ubiquitin fold modifier 1 protein; InterPro: IPR005375 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade. There are many different E3 ligases, which are responsible for the type of ubiquitin chain formed, the specificity of the target protein, and the regulation of the ubiquitinylation process []. Ubiquitinylation is an important regulatory tool that controls the concentration of key signalling proteins, such as those involved in cell cycle control, as well as removing misfolded, damaged or mutant proteins that could be harmful to the cell. Several ubiquitin-like molecules have been discovered, such as Ufm1 (IPR005375 from INTERPRO), SUMO1 (IPR003653 from INTERPRO), NEDD8, Rad23 (IPR004806 from INTERPRO), Elongin B and Parkin (IPR003977 from INTERPRO), the latter being involved in Parkinson's disease []. Ubiquitin-like molecules (UBLs) can be divided into two subclasses: type-1 UBLs, which ligate to target proteins in a manner similar, but not identical, to the ubiquitylation pathway, such as SUMO, NEDD8, and UCRP/ISG15, and type-2 UBLs (also called UDPs, ubiquitin-domain proteins), which contain ubiquitin-like structure embedded in a variety of different classes of large proteins with apparently distinct functions, such as Rad23, Elongin B, Scythe, Parkin, and HOIL-1. This entry represents Ufm1 (ubiquitin-fold modifier), which is a ubiquitin-like protein with structural similarities to ubiquitin [, ]. Ufm1 is one of a number of ubiquitin-like modifiers that conjugate to target proteins in cells through Uba5 (E1) and Ufc1 (E2). The Ufm1-system is conserved in metazoa and plants, suggesting it has a potential role in multicellular organisms []. Human Ufm1 is synthesized as a precursor consisting of 85 amino-acid residues. Prior to activation by Uba5, the extra amino acids at the C-terminal region of Ufm1 are removed to expose Gly, which is necessary for conjugation to target molecule(s). C-terminal processing of Ufm1 requires two specific cysteine peptidases (IPR012462 from INTERPRO): UfSP1 and UfSP2; both peptidases are also able to release Ufm1 from Ufm1-conjugated cellular proteins. UfSP2 is present in most, if not all, of multi-cellular organisms including plant, nematode, fly, and mammal, whereas UfSP1 is not present in plants and nematodes []. For further information on ubiquitin, please see Protein of the Month [].; PDB: 1J0G_A 1WXS_A 1L7Y_A.
Probab=30.09 E-value=27 Score=22.24 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=23.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVT 188 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~ 188 (256)
.-|-...++.+++++.+++..+..|-+.-..|-
T Consensus 25 ~apftaVlkfaAeeF~vp~~tsaiItndG~GIn 57 (76)
T PF03671_consen 25 EAPFTAVLKFAAEEFKVPPATSAIITNDGVGIN 57 (76)
T ss_dssp TSBHHHHHHHHHHHTTS-SSSEEEEESSS-EE-
T ss_pred CCchHHHHHHHHHHcCCCCceEEEEecCCcccc
Confidence 356668899999999999998887755444433
No 315
>PLN02444 HMP-P synthase
Probab=29.98 E-value=81 Score=28.82 Aligned_cols=84 Identities=13% Similarity=0.159 Sum_probs=51.9
Q ss_pred CCChhhHhhhhhcCCC--CCCCCCChhHH-HHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 70 DIGADDYHGFVHGRLP--YDLIKPDPQLR-NLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~--~~~~~~~pg~~-~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
+++.+.++..+.+... ...+++.-|+. +.+..++++-. |||-+..-.+.+.+.+..-+.++...
T Consensus 296 ~lt~d~~~d~ieeQaeqGVDfmTIH~Gv~~~~v~~~~~R~tgIVSRGGSi~a~Wml~~~kENPlYe~F------------ 363 (642)
T PLN02444 296 NLTWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHW------------ 363 (642)
T ss_pred hCCHHHHHHHHHHHHHhCCCEEEEChhhHHHHHHHHhCcccCceeCCcHHHHHHHHHcCCcCchHHHH------------
Confidence 4666777666654331 23346666754 66777765544 89988888887777655433332221
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
+-+..++++|.+ ++-.||++
T Consensus 364 ---------------D~ileI~k~YDV----tlSLGDGL 383 (642)
T PLN02444 364 ---------------DDILDICNQYDI----ALSIGDGL 383 (642)
T ss_pred ---------------HHHHHHHHHhCe----eeeccCCc
Confidence 335567777777 67888876
No 316
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=29.93 E-value=1.2e+02 Score=25.29 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=58.5
Q ss_pred hHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHc
Q 025190 94 QLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170 (256)
Q Consensus 94 g~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~ 170 (256)
..+++|+..+++++ ..--...+.++.+++...-.. ...|+........+.+| .+--..+++..++.+
T Consensus 5 ~~~~ll~~Ake~~yAvpAfN~~nlE~~~AileaA~e~~-sPvIiq~S~g~~~y~gg---------~~~~~~~v~~~a~~~ 74 (286)
T COG0191 5 SMKELLDKAKENGYAVPAFNINNLETLQAILEAAEEEK-SPVIIQFSEGAAKYAGG---------ADSLAHMVKALAEKY 74 (286)
T ss_pred cHHHHHHHHHHcCCceeeeeecCHHHHHHHHHHHHHhC-CCEEEEecccHHHHhch---------HHHHHHHHHHHHHHC
Confidence 34789999999987 344456677777777543211 22333322222111111 122335677788888
Q ss_pred CCCCCcEEEEc--CCccccHHHHHcCCeEEEEcC
Q 025190 171 NVDPRHALFLD--DNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 171 ~~~~~~~i~vG--Ds~~Di~~a~~~G~~~v~v~~ 202 (256)
++|. +++-+ ++..++..|.++|..++++.-
T Consensus 75 ~vPV--~lHlDHg~~~~~~~~ai~~GFsSvMiDg 106 (286)
T COG0191 75 GVPV--ALHLDHGASFEDCKQAIRAGFSSVMIDG 106 (286)
T ss_pred CCCE--EEECCCCCCHHHHHHHHhcCCceEEecC
Confidence 9764 45553 345789999999999999954
No 317
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=29.80 E-value=1.4e+02 Score=25.17 Aligned_cols=54 Identities=17% Similarity=0.233 Sum_probs=44.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCc-EEEEcCCcc--c-cHHHHHcCCeEEEEcCCC
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRH-ALFLDDNIK--N-VTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~-~i~vGDs~~--D-i~~a~~~G~~~v~v~~~~ 204 (256)
......+|-.+.++.+++.++.++++ +++|=|++. + |+..+++|.+.-++.++.
T Consensus 131 Gaidl~~~~~~Nl~~~A~a~~k~~~dltV~vLdRpRH~~lI~eir~~Gari~Li~DGD 188 (322)
T PRK12415 131 GKISLDDPIEKTIEIVAEANNKKIRDLTVIVQERERHQDIIDRVRAKGARVKLFGDGD 188 (322)
T ss_pred ceecCCCCHHHHHHHHHHHcCCChhHeEEEEEcCchHHHHHHHHHHcCCeEEEecccc
Confidence 34445788889999999999998876 678889993 3 899999999999998764
No 318
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=29.33 E-value=1.7e+02 Score=23.76 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc--cccHHHHHcCCeEEEEc
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNI--KNVTAGKALGLRTVLVG 201 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~--~Di~~a~~~G~~~v~v~ 201 (256)
..|-|..-+.++...+++ ||.|||.+ ..-...+.-|++-+.+.
T Consensus 71 ~~PGP~~ARE~l~~~~iP---~IvI~D~p~~k~kd~l~~~g~GYIivk 115 (276)
T PF01993_consen 71 AAPGPTKAREMLSAKGIP---CIVISDAPTKKAKDALEEEGFGYIIVK 115 (276)
T ss_dssp TSHHHHHHHHHHHHSSS----EEEEEEGGGGGGHHHHHHTT-EEEEET
T ss_pred CCCCcHHHHHHHHhCCCC---EEEEcCCCchhhHHHHHhcCCcEEEEe
Confidence 578889999999999986 89999999 36778888999988775
No 319
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=29.31 E-value=35 Score=22.23 Aligned_cols=15 Identities=40% Similarity=0.390 Sum_probs=12.8
Q ss_pred EEEEecCCCccCCCc
Q 025190 7 CLVFDLDDTLYPSET 21 (256)
Q Consensus 7 ~viFD~DGTL~d~~~ 21 (256)
.|+++-|||.++++.
T Consensus 41 ~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 41 SLVLDEDGTGVDTEE 55 (79)
T ss_pred EEEEecCCcEEccHH
Confidence 488999999998864
No 320
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=28.82 E-value=3e+02 Score=22.67 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
++...+.+++++|++.-..+.+.+...-...+...|.+.+.-+........-..+.+..++.+.+...
T Consensus 98 dK~~~k~~l~~~gIp~p~~~~~~~~~~~~~~~~~~~~P~ivKP~~g~~s~Gv~~v~~~~el~~~~~~~ 165 (304)
T PRK01372 98 DKLRTKLVWQAAGLPTPPWIVLTREEDLLAAIDKLGLPLVVKPAREGSSVGVSKVKEEDELQAALELA 165 (304)
T ss_pred CHHHHHHHHHHCCCCCCCEEEEeCcchHHHHHhhcCCCEEEeeCCCCCCCCEEEeCCHHHHHHHHHHH
Confidence 44678889999999866666665443334556677877664443333333345677777777766554
No 321
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=28.36 E-value=90 Score=26.63 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=28.8
Q ss_pred HHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcc
Q 025190 95 LRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 95 ~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~ 127 (256)
.+.++.+|+++|. ++|......+..+|+.+|++
T Consensus 16 Fk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~ 50 (335)
T PF04007_consen 16 FKNIIRELEKRGHEVLITARDKDETEELLDLYGID 50 (335)
T ss_pred HHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCC
Confidence 5678999999986 89999999999999999974
No 322
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=28.12 E-value=37 Score=22.10 Aligned_cols=15 Identities=33% Similarity=0.308 Sum_probs=12.4
Q ss_pred EEEEecCCCccCCCc
Q 025190 7 CLVFDLDDTLYPSET 21 (256)
Q Consensus 7 ~viFD~DGTL~d~~~ 21 (256)
.++++-|||.++++.
T Consensus 42 ~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 42 RLVLEEDGTEVDDEE 56 (78)
T ss_dssp EEEETTTTCBESSCH
T ss_pred EEEEeCCCcEEccHH
Confidence 478899999999764
No 323
>COG0422 ThiC Thiamine biosynthesis protein ThiC [Coenzyme metabolism]
Probab=27.94 E-value=1.1e+02 Score=26.48 Aligned_cols=59 Identities=14% Similarity=0.118 Sum_probs=39.4
Q ss_pred CCCChhhHhhhhhcCCC--CCCCCCChhHH-HHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 69 YDIGADDYHGFVHGRLP--YDLIKPDPQLR-NLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~--~~~~~~~pg~~-~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
.+++.++++..+.+... ....++.-|+. +.+..+++.+- |||.+..-...+.+.+..-+
T Consensus 136 ~~~t~d~~~~~v~~qa~~GVdfmTIHaGV~~~~~~~~~~~~R~~giVSRGGsi~a~Wml~~~~EN 200 (432)
T COG0422 136 EDLTEDDFFDTVEKQAEQGVDFMTIHAGVLLEYVPRTKRSGRVTGIVSRGGSIMAAWMLHNHKEN 200 (432)
T ss_pred hhCCHHHHHHHHHHHHHhCCcEEEeehhhhHHHHHHHHhcCceeeeeccchHHHHHHHHHcCCcC
Confidence 46778888777655332 23346667775 67888887553 99999888777777665443
No 324
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=27.90 E-value=66 Score=20.24 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=15.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc
Q 025190 162 AMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
.+...|++.|+...++|.|||-.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp THHHHHHTTT--TT-EEEETTEE
T ss_pred CHHHHHHHcCCCCCCEEEEcCEE
Confidence 36677888899999999999854
No 325
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=27.64 E-value=3e+02 Score=21.53 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=46.6
Q ss_pred EEecCCh----HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 025190 108 IFTNSDR----NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDN 183 (256)
Q Consensus 108 ivs~~~~----~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs 183 (256)
++|+... ..++.+++.-++. ||.|.--...+ .+...-+=|...+..+++.|. ..+++-+..|+
T Consensus 76 LLTGR~e~~F~~lI~~ml~s~~L~--Fd~v~LKp~~~----------~~~sTm~fK~~~l~~ll~~Y~-~~~eI~IYeDR 142 (197)
T PF10307_consen 76 LLTGRRESKFSSLIERMLASKGLE--FDAVCLKPENQ----------RFSSTMDFKQAFLEDLLHTYK-NAEEIRIYEDR 142 (197)
T ss_pred EEeCCCchhHHHHHHHHHhcCCCC--ccEEEeCcccc----------cCccccHHHHHHHHHHHHhcC-CCCEEEEEcCC
Confidence 8888764 4445556666776 88776532200 000011113466777888777 77999999999
Q ss_pred ccccHHHHHc
Q 025190 184 IKNVTAGKAL 193 (256)
Q Consensus 184 ~~Di~~a~~~ 193 (256)
..=++..+..
T Consensus 143 ~~hvk~Fr~F 152 (197)
T PF10307_consen 143 PKHVKGFRDF 152 (197)
T ss_pred HHHHHHHHHH
Confidence 9888887764
No 326
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=27.62 E-value=3.8e+02 Score=22.68 Aligned_cols=76 Identities=14% Similarity=0.171 Sum_probs=43.8
Q ss_pred EEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 025190 107 IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKN 186 (256)
Q Consensus 107 ~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~D 186 (256)
+++|+|..+.+..++..+. ..--+.++. ..|.-..|...++.+|.....+-.=.|..-|
T Consensus 77 I~~~~Gs~e~i~~~~~~~~-~~g~~~vli--------------------~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d 135 (351)
T PRK01688 77 VLVSRGADEGIELLIRAFC-EPGKDAILY--------------------CPPTYGMYSVSAETIGVEIRTVPTLDNWQLD 135 (351)
T ss_pred EEEcCCHHHHHHHHHHHhc-CCCCCEEEE--------------------cCCCHHHHHHHHHHcCCEEEEeecCCCCCCC
Confidence 4899998888887777642 111134444 3555567888888888754433221232345
Q ss_pred cHHHHHc--CCeEEEEcCC
Q 025190 187 VTAGKAL--GLRTVLVGKT 203 (256)
Q Consensus 187 i~~a~~~--G~~~v~v~~~ 203 (256)
++...++ +.+.+++.++
T Consensus 136 ~~~l~~~~~~~~lv~l~nP 154 (351)
T PRK01688 136 LPAIADNLDGVKVVYVCSP 154 (351)
T ss_pred HHHHHHhccCCcEEEEeCC
Confidence 5554433 4556666544
No 327
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=27.07 E-value=3e+02 Score=27.72 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+...++.+++++|++.-....+.+...-...++..|.+.+.-+........-.++.+.++|...+...+
T Consensus 669 DK~~~~~~L~~~GIp~P~~~~~~s~ee~~~~~~~igyPvvVKP~~~~Gg~Gv~iv~~~eeL~~~~~~a~ 737 (1066)
T PRK05294 669 DRERFSKLLEKLGIPQPPNGTATSVEEALEVAEEIGYPVLVRPSYVLGGRAMEIVYDEEELERYMREAV 737 (1066)
T ss_pred CHHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhcCCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHH
Confidence 456789999999998777777765433345677889887765544344455677888888887776544
No 328
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=27.05 E-value=93 Score=20.27 Aligned_cols=36 Identities=8% Similarity=-0.070 Sum_probs=24.2
Q ss_pred HHHHHHhhhcCcE-EEecCChHHHHHHHHhcCccccc
Q 025190 95 LRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCF 130 (256)
Q Consensus 95 ~~~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f 130 (256)
+.++.++++++|. +.-.+..+.+...++..|+.+.+
T Consensus 59 L~~l~~~~~~~g~~v~i~~~~~~~~~~l~~~gl~~~~ 95 (99)
T cd07043 59 LLGAYKRARAAGGRLVLVNVSPAVRRVLELTGLDRLF 95 (99)
T ss_pred HHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCcceee
Confidence 3456677777776 43334456788899999987654
No 329
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=26.79 E-value=1.6e+02 Score=24.58 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHH------cCCeEEEEcC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKA------LGLRTVLVGK 202 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~------~G~~~v~v~~ 202 (256)
+--|.++.|..+++++|++.+.+|++=|..+...+++. +|..-|.+-.
T Consensus 70 ~~lp~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLd 123 (285)
T COG2897 70 HMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILD 123 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEec
Confidence 46789999999999999987765555555666655544 6998877743
No 330
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=26.66 E-value=3.9e+02 Score=22.45 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=52.4
Q ss_pred HHHHhhhcCcE-E-EecCChHHHHHHHHhcCcccccceeEe-cccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 025190 97 NLLCSITQRKI-I-FTNSDRNHAITCLKRLEIADCFDQIIC-FETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173 (256)
Q Consensus 97 ~~l~~l~~~~~-i-vs~~~~~~~~~~l~~~gl~~~f~~i~~-~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 173 (256)
++++++++.|+ + ..-++.+.. ..+...|. |.++. +-..+ |+.+ ..+....+..+.+..+++
T Consensus 100 ~~i~~lk~~g~~v~~~v~s~~~a-~~a~~~Ga----D~Ivv~g~eag-----Gh~g------~~~~~~ll~~v~~~~~iP 163 (307)
T TIGR03151 100 KYIPRLKENGVKVIPVVASVALA-KRMEKAGA----DAVIAEGMESG-----GHIG------ELTTMALVPQVVDAVSIP 163 (307)
T ss_pred HHHHHHHHcCCEEEEEcCCHHHH-HHHHHcCC----CEEEEECcccC-----CCCC------CCcHHHHHHHHHHHhCCC
Confidence 58888888886 3 322333333 45555664 44442 21111 0000 234567778888777664
Q ss_pred CCcEEEEcCCc--cccHHHHHcCCeEEEEcCC
Q 025190 174 PRHALFLDDNI--KNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 174 ~~~~i~vGDs~--~Di~~a~~~G~~~v~v~~~ 203 (256)
++.-|+=. .|+..+...|...|+++..
T Consensus 164 ---viaaGGI~~~~~~~~al~~GA~gV~iGt~ 192 (307)
T TIGR03151 164 ---VIAAGGIADGRGMAAAFALGAEAVQMGTR 192 (307)
T ss_pred ---EEEECCCCCHHHHHHHHHcCCCEeecchH
Confidence 67777655 5788888899999988643
No 331
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=26.30 E-value=1.5e+02 Score=29.38 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCe
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLR 196 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~ 196 (256)
-|+.....-.-+++.++ ..+++-||+. .-|..|+.+||-
T Consensus 706 LK~~T~~VI~eL~~AnI--RtVMcTGDNllTaisVakeCgmi 745 (1140)
T KOG0208|consen 706 LKEETKRVIDELNRANI--RTVMCTGDNLLTAISVAKECGMI 745 (1140)
T ss_pred cccccHHHHHHHHhhcc--eEEEEcCCchheeeehhhccccc
Confidence 46655555555555555 6789999999 789999999984
No 332
>PLN02887 hydrolase family protein
Probab=26.26 E-value=1.2e+02 Score=28.13 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=33.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
.+-+...+.|++++++|+ ++|+.....+...++.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 567888999999999987 89999999999999998875
No 333
>PRK02186 argininosuccinate lyase; Provisional
Probab=26.23 E-value=4.9e+02 Score=25.63 Aligned_cols=69 Identities=10% Similarity=-0.046 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccccH-HHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKNVT-AGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~-~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
-++..++..+++.|++.-+...+.+ ..|+. .+...|.++|.-+........-.++.+..|+.+.+..+.
T Consensus 106 ~dK~~~r~~L~~~GIp~P~~~~v~~-~~e~~~~~~~~~~PvVVKP~~g~gS~GV~~v~~~~el~~a~~~~~ 175 (887)
T PRK02186 106 RDKKRLARTLRDHGIDVPRTHALAL-RAVALDALDGLTYPVVVKPRMGSGSVGVRLCASVAEAAAHCAALR 175 (887)
T ss_pred cCHHHHHHHHHHcCCCCCCEEEeCC-HHHHHHHHHhCCCCEEEEeCCCCCCCCeEEECCHHHHHHHHHHHH
Confidence 3457788899999998666666643 44543 346678877766544333444567788888877766554
No 334
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=26.11 E-value=3.3e+02 Score=21.48 Aligned_cols=43 Identities=9% Similarity=0.133 Sum_probs=32.7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCc--cccHH-HHHcCCeEEEEcC
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNI--KNVTA-GKALGLRTVLVGK 202 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~--~Di~~-a~~~G~~~v~v~~ 202 (256)
-++...++.+.+..++ .+++.|+-. .|+.. ++..|...|.++.
T Consensus 183 g~~~~~~~~i~~~~~i---pvia~GGi~s~~di~~~l~~~gadgV~vg~ 228 (232)
T TIGR03572 183 GYDLELIKTVSDAVSI---PVIALGGAGSLDDLVEVALEAGASAVAAAS 228 (232)
T ss_pred CCCHHHHHHHHhhCCC---CEEEECCCCCHHHHHHHHHHcCCCEEEEeh
Confidence 3567888888887655 388888554 68888 8889999888764
No 335
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=25.69 E-value=3.7e+02 Score=21.88 Aligned_cols=99 Identities=11% Similarity=0.133 Sum_probs=52.2
Q ss_pred CCChhHHHHHHhhhcCcE----EEecC-ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI----IFTNS-DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~----ivs~~-~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.|.....++++.++++|+ +++-. +.+.++.+++... -|--+++..... ++. .....+-.+.++
T Consensus 124 lp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~---gfiy~vs~~G~T--------G~~-~~~~~~~~~~i~ 191 (256)
T TIGR00262 124 LPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQ---GFVYLVSRAGVT--------GAR-NRAASALNELVK 191 (256)
T ss_pred CChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCC---CCEEEEECCCCC--------CCc-ccCChhHHHHHH
Confidence 455677788888888875 33333 3345555555422 122233322111 110 001122233344
Q ss_pred HHHHHcCCCCCcEEEEcCCcc---ccHHHHHcCCeEEEEcCCC
Q 025190 165 LALHVANVDPRHALFLDDNIK---NVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~---Di~~a~~~G~~~v~v~~~~ 204 (256)
++.+..+. -+++|=+.+ ++..+..+|...+.+++..
T Consensus 192 ~lr~~~~~----pi~vgfGI~~~e~~~~~~~~GADgvVvGSai 230 (256)
T TIGR00262 192 RLKAYSAK----PVLVGFGISKPEQVKQAIDAGADGVIVGSAI 230 (256)
T ss_pred HHHhhcCC----CEEEeCCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 44433333 377888775 6888888899999887653
No 336
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=25.17 E-value=86 Score=26.53 Aligned_cols=28 Identities=25% Similarity=0.284 Sum_probs=23.2
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRN 115 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~ 115 (256)
...++|.+.++++.+++.|+ ++||+...
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 34567899999999999987 89999664
No 337
>PRK10342 glycerate kinase I; Provisional
Probab=25.17 E-value=3.8e+02 Score=23.42 Aligned_cols=76 Identities=9% Similarity=-0.055 Sum_probs=50.9
Q ss_pred ChHHHHHHHHhcCccccc---ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHH
Q 025190 113 DRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTA 189 (256)
Q Consensus 113 ~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~ 189 (256)
...-++.+++..++++.+ |.|++++..-. ..+..+|- |..+.+.+++++++. +++.|--..|...
T Consensus 265 l~~G~d~v~~~~~l~~~l~~ADLVITGEG~~D---------~QTl~GK~-p~gVa~~A~~~~vPv--iai~G~~~~~~~~ 332 (381)
T PRK10342 265 LKSGIEIVTTALNLEEHIHDCTLVITGEGRID---------SQSIHGKV-PIGVANVAKKYHKPV--IGIAGSLTDDVGV 332 (381)
T ss_pred ECCHHHHHHHhcCHHHHhccCCEEEECCCcCc---------ccccCCcc-HHHHHHHHHHhCCCE--EEEecccCCChHH
Confidence 445567778888887654 77998875432 44555664 466667788888862 4444544478888
Q ss_pred HHHcCCeEEEE
Q 025190 190 GKALGLRTVLV 200 (256)
Q Consensus 190 a~~~G~~~v~v 200 (256)
....|+..++-
T Consensus 333 ~~~~g~~av~~ 343 (381)
T PRK10342 333 VHQHGIDAVFS 343 (381)
T ss_pred HHhcCceEEEE
Confidence 99999887654
No 338
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=25.17 E-value=1e+02 Score=19.44 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=19.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc
Q 025190 162 AMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
.+..+|++.|+...++|.|||-.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIGDFE 66 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEccEE
Confidence 36788888999999999999854
No 339
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis. This family does not contain all known ATP-grasp domain members. All the enzymes of this family possess ATP-dependent carboxylate-amine ligase activity, and their catalytic mechanisms are likely to include acylphosphate intermediates.; PDB: 3K5H_C 3K5I_C 3AX6_A 3Q2O_B 3QFF_B 3R5H_A 3ORQ_B 3ORR_B 4E4T_B 2Z04_A ....
Probab=25.15 E-value=1.8e+02 Score=22.03 Aligned_cols=59 Identities=15% Similarity=0.321 Sum_probs=39.0
Q ss_pred HHHcCCCCCcEEEEcCCcccc-HHHHHcCCeEEEEc-CCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 167 LHVANVDPRHALFLDDNIKNV-TAGKALGLRTVLVG-KTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di-~~a~~~G~~~v~v~-~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
|+++|++...-..+ ++..|+ .++...|.+++.-. .+.-..+-.+++.+-.++....+.+
T Consensus 1 l~~~gip~~~~~~i-~~~~~l~~a~~~iG~P~vlK~~~~GYDGkGq~~i~~~~dl~~a~~~~ 61 (172)
T PF02222_consen 1 LDELGIPTAPYATI-DSLEDLEEAAESIGFPAVLKTRRGGYDGKGQFVIRSEEDLEKAWQEL 61 (172)
T ss_dssp HHHTT--B-EEEEE-SSHHHHHHHHHHHTSSEEEEESSSSCTTTTEEEESSGGGHHHHHHHT
T ss_pred CcccCCCCCCeEEE-CCHHHHHHHHHHcCCCEEEEccCcCcCCCccEEECCHHHHHHHHHhc
Confidence 46778866655555 555575 44577799998774 4444556678999999998877665
No 340
>PTZ00174 phosphomannomutase; Provisional
Probab=24.84 E-value=1.3e+02 Score=24.13 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=26.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR 123 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~ 123 (256)
.+-|...+.|++++++|+ ++|++....+...++.
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 456778899999999987 8888877777666653
No 341
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=24.83 E-value=1.4e+02 Score=28.28 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=32.0
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD 128 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~ 128 (256)
..+...+.|++|+++|+ ++|+.....+...++.+++..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 44677889999999986 899999999999999998753
No 342
>PF15366 DUF4597: Domain of unknown function (DUF4597)
Probab=24.77 E-value=52 Score=19.65 Aligned_cols=23 Identities=26% Similarity=0.484 Sum_probs=14.5
Q ss_pred CCccccchhhccccccc--cCCCCC
Q 025190 233 DGDQRISRTRSELESIL--TTTPVG 255 (256)
Q Consensus 233 ~~~~~~~~~~~~~~~~~--~~~~~~ 255 (256)
..++.++.-..+.+.+| +|||.|
T Consensus 10 deaPVL~dKhLdVPnIIiTPPTPTg 34 (62)
T PF15366_consen 10 DEAPVLSDKHLDVPNIIITPPTPTG 34 (62)
T ss_pred cccccccccccCCCceEecCCCCCc
Confidence 34445566666677776 777765
No 343
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.76 E-value=2.8e+02 Score=23.61 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=30.4
Q ss_pred hhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcc
Q 025190 93 PQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 93 pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~ 127 (256)
+-++.++.+|+++|+ ++|......+.++|+.+|+.
T Consensus 14 hfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~ 50 (346)
T COG1817 14 HFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFP 50 (346)
T ss_pred hHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCC
Confidence 346788999999998 89999999999999999975
No 344
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=24.53 E-value=4e+02 Score=21.89 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=61.5
Q ss_pred CCCChhHHHHH---HhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 89 IKPDPQLRNLL---CSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 89 ~~~~pg~~~~l---~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
-.++|+..+++ +.|-+.|+ -.++.+.. +-+.|+..|-.-.- --+...+. ..+-.++..
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v-~a~rLed~Gc~aVM---PlgsPIGS------------g~Gl~n~~~ 180 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPM-LAKHLEDIGCATVM---PLGSPIGS------------GQGLQNLLN 180 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHH-HHHHHHHcCCeEEe---eccCcccC------------CCCCCCHHH
Confidence 35566666665 55667787 33444444 44467776643211 11111111 125567899
Q ss_pred HHHHHHHcCCCCCcEEEEcCCc---cccHHHHHcCCeEEEEcCCCC
Q 025190 163 MKLALHVANVDPRHALFLDDNI---KNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~---~Di~~a~~~G~~~v~v~~~~~ 205 (256)
++.+.+...++ +.+|-+. +|+..|..+|...+++++...
T Consensus 181 l~~i~e~~~vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 181 LQIIIENAKIP----VIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred HHHHHHcCCCc----EEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 99999987763 6676665 799999999999999988765
No 345
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=24.25 E-value=1.1e+02 Score=22.15 Aligned_cols=42 Identities=12% Similarity=0.256 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEE----cCCccc---cHHHHHcCCeEEEEc
Q 025190 160 MDAMKLALHVANVDPRHALFL----DDNIKN---VTAGKALGLRTVLVG 201 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~v----GDs~~D---i~~a~~~G~~~v~v~ 201 (256)
+...+.+++.+++.|.+++++ |.+++= +..|++.|++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 89 EGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp GTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred hHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 355677888888888887765 444443 456677799998763
No 346
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=24.04 E-value=1.9e+02 Score=20.81 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=30.8
Q ss_pred CCCCHHHHHHHHHHcCCCCC-cEEEEcCCc-cc------cHHHHHcCCeEEEEc
Q 025190 156 LKPSMDAMKLALHVANVDPR-HALFLDDNI-KN------VTAGKALGLRTVLVG 201 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~-~~i~vGDs~-~D------i~~a~~~G~~~v~v~ 201 (256)
..|.++.+..+++++|++++ .+|+.+++. .. .-+++.+|.+.+.+-
T Consensus 76 ~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~il 129 (138)
T cd01445 76 MEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAIL 129 (138)
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEe
Confidence 46777899999999999765 577776641 12 224555677766543
No 347
>PRK09284 thiamine biosynthesis protein ThiC; Provisional
Probab=23.91 E-value=98 Score=28.25 Aligned_cols=84 Identities=12% Similarity=0.141 Sum_probs=52.4
Q ss_pred CCChhhHhhhhhcCCC--CCCCCCChhHH-HHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 70 DIGADDYHGFVHGRLP--YDLIKPDPQLR-NLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~--~~~~~~~pg~~-~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
+++.+.++..+.+... ....++.-|+. +.+..++++-. |||-+..-.+.+.+.+..-+.++...
T Consensus 291 ~lt~e~~~d~ieeQAeqGVDf~TIHaGv~~~~v~~~~~R~tgIVSRGGSima~Wml~h~kENplYe~F------------ 358 (607)
T PRK09284 291 DLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHF------------ 358 (607)
T ss_pred hCCHHHHHHHHHHHHHhCCCEEEEChhhHHHHHHHHhCcccCcccCCHHHHHHHHHHcCCcCcHHHHH------------
Confidence 4666777666554331 23346667754 66777775544 99999888888777765433322211
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
+-+-.++++|.+ ++-.||++
T Consensus 359 ---------------D~ileI~k~YDV----tlSLGDGL 378 (607)
T PRK09284 359 ---------------EEICEIMAAYDV----SFSLGDGL 378 (607)
T ss_pred ---------------HHHHHHHHHhCe----eeeccCCc
Confidence 335567777777 67888876
No 348
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=23.70 E-value=1.6e+02 Score=22.67 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=26.7
Q ss_pred HHHHhhhcCcE---EEecCChHHHHHHHHhcC-----cccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHH
Q 025190 97 NLLCSITQRKI---IFTNSDRNHAITCLKRLE-----IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH 168 (256)
Q Consensus 97 ~~l~~l~~~~~---ivs~~~~~~~~~~l~~~g-----l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~ 168 (256)
.+|..++++|+ ++.+...+........+. +-..||.|++-+ +.-...+.
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs-----------------------~~da~r~~ 165 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQS-----------------------EADAERFR 165 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESS-----------------------HHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECC-----------------------HHHHHHHH
Confidence 56777777776 444443332222222111 224577777633 44557788
Q ss_pred HcCCCCCcEEEEcCCccccH
Q 025190 169 VANVDPRHALFLDDNIKNVT 188 (256)
Q Consensus 169 ~~~~~~~~~i~vGDs~~Di~ 188 (256)
++|++++++...|+--.|..
T Consensus 166 ~lG~~~~~v~v~GnlKfd~~ 185 (186)
T PF04413_consen 166 KLGAPPERVHVTGNLKFDQA 185 (186)
T ss_dssp TTT-S--SEEE---GGG---
T ss_pred HcCCCcceEEEeCcchhccc
Confidence 89999999999998776653
No 349
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=23.60 E-value=30 Score=22.17 Aligned_cols=9 Identities=44% Similarity=0.778 Sum_probs=8.2
Q ss_pred EEecCCCcc
Q 025190 9 VFDLDDTLY 17 (256)
Q Consensus 9 iFD~DGTL~ 17 (256)
=||++|.|+
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 350
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.60 E-value=2.8e+02 Score=19.85 Aligned_cols=39 Identities=21% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCc--cccHHHHHc
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNI--KNVTAGKAL 193 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~--~Di~~a~~~ 193 (256)
.+.|....++.++++.|+....+=+.|.+. .|++...++
T Consensus 42 ~~QP~~~~i~~aa~~aGl~y~~iPV~~~~iT~~dV~~f~~A 82 (130)
T COG3453 42 PGQPGFAAIAAAAEAAGLTYTHIPVTGGGITEADVEAFQRA 82 (130)
T ss_pred CCCCChHHHHHHHHhcCCceEEeecCCCCCCHHHHHHHHHH
Confidence 478999999999999999887777888887 477766654
No 351
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=23.11 E-value=46 Score=30.06 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=21.1
Q ss_pred CChhHHHHHHhhhcCcEEEecCChHHHHHHHHh-cCc
Q 025190 91 PDPQLRNLLCSITQRKIIFTNSDRNHAITCLKR-LEI 126 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~-~gl 126 (256)
+.++..+.+.... +-++||...+..++..++. +|.
T Consensus 134 v~~e~~~v~~~~~-~~~vv~~~PrvMve~Flkeyl~~ 169 (525)
T PLN02588 134 VGLEMFQVLKRGG-KRVGVSDLPQVMIDVFLRDYLEI 169 (525)
T ss_pred cCHHHHHHHhhcC-cEEEEecCCHHHHHHHHHHhcCc
Confidence 4455556665553 2346666788888877664 454
No 352
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=22.86 E-value=4.2e+02 Score=21.51 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=54.6
Q ss_pred CCCCChhHHHHH---HhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 88 LIKPDPQLRNLL---CSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 88 ~~~~~pg~~~~l---~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
.-.++|+..+++ +.|.+.|+ -.++.+.. .-+.|+..|-.-. .--+..++. ..+--++.
T Consensus 102 ~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v-~akrL~d~Gcaav---MPlgsPIGS------------g~Gi~n~~ 165 (247)
T PF05690_consen 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPV-LAKRLEDAGCAAV---MPLGSPIGS------------GRGIQNPY 165 (247)
T ss_dssp TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HH-HHHHHHHTT-SEB---EEBSSSTTT---------------SSTHH
T ss_pred CCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHH-HHHHHHHCCCCEE---Eeccccccc------------CcCCCCHH
Confidence 345667777666 56667887 34444444 4446676664311 111222221 12456779
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc---cccHHHHHcCCeEEEEcCCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNI---KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~---~Di~~a~~~G~~~v~v~~~~ 204 (256)
.++.+.++.+++ +.|+-+. +|...|...|...|+++...
T Consensus 166 ~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTAi 207 (247)
T PF05690_consen 166 NLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTAI 207 (247)
T ss_dssp HHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHHH
T ss_pred HHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhHH
Confidence 999999999885 4555544 79999999999999998653
No 353
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=22.76 E-value=54 Score=28.37 Aligned_cols=17 Identities=35% Similarity=0.473 Sum_probs=14.6
Q ss_pred CCeEEEEecCCCccCCC
Q 025190 4 PFNCLVFDLDDTLYPSE 20 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~ 20 (256)
..|+|.||=|+||++.-
T Consensus 146 ~L~LvTFDgDvTLY~DG 162 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDG 162 (408)
T ss_pred CceEEEEcCCcccccCC
Confidence 57899999999999653
No 354
>TIGR00045 glycerate kinase. The only characterized member of this family so far is the glycerate kinase GlxK (EC 2.7.1.31) of E. coli. This enzyme acts after glyoxylate carboligase and 2-hydroxy-3-oxopropionate reductase (tartronate semialdehyde reductase) in the conversion of glyoxylate to 3-phosphoglycerate (the D-glycerate pathway) as a part of allantoin degradation.
Probab=22.62 E-value=3.7e+02 Score=23.46 Aligned_cols=75 Identities=12% Similarity=0.063 Sum_probs=51.3
Q ss_pred ChHHHHHHHHhcCccccc---ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccH
Q 025190 113 DRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVT 188 (256)
Q Consensus 113 ~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~ 188 (256)
...-++.+++..++++.+ |.|++++..-. ..+..+| -|..+.+.+++++++ |+.|.-+. .+..
T Consensus 264 l~~G~d~v~~~~~l~~~l~~ADlVITGEG~~D---------~Qtl~GK-~p~~Va~~A~~~~vP---viai~G~v~~~~~ 330 (375)
T TIGR00045 264 LKPGIDLVLELLDLEQKIKDADLVITGEGRLD---------RQSLMGK-APVGVAKRAKKYGVP---VIAIAGSLGDGVD 330 (375)
T ss_pred EccHHHHHHHhhCHHHHhcCCCEEEECCCccc---------ccccCCc-hHHHHHHHHHHhCCe---EEEEecccCCChH
Confidence 445567778888887654 77998875442 4455566 356677788889886 55554444 6788
Q ss_pred HHHHcCCeEEEE
Q 025190 189 AGKALGLRTVLV 200 (256)
Q Consensus 189 ~a~~~G~~~v~v 200 (256)
.....|+..++-
T Consensus 331 ~~~~~g~~a~~~ 342 (375)
T TIGR00045 331 VLPQHGIDAAFS 342 (375)
T ss_pred HHHhcCccEEEE
Confidence 888999876653
No 355
>PF12990 DUF3874: Domain of unknonw function from B. Theta Gene description (DUF3874); InterPro: IPR024450 This domain of unknown function if found in uncharacterised proteins from Bacteroides thetaiotaomicron and other Bacteroidetes.
Probab=22.55 E-value=1.3e+02 Score=19.22 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=28.0
Q ss_pred HHHHHHhhhcCc-EEEecCChHHHHHHHHhcCcc
Q 025190 95 LRNLLCSITQRK-IIFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 95 ~~~~l~~l~~~~-~ivs~~~~~~~~~~l~~~gl~ 127 (256)
+.++++.|+++. ..+++......-++|..+|+.
T Consensus 28 a~~If~~L~k~~~~~l~~~~~~~FGriL~~~gi~ 61 (73)
T PF12990_consen 28 AAEIFERLQKKSPAALRGSNPNHFGRILQKLGIP 61 (73)
T ss_pred HHHHHHHHHHhCccccccCCHHHHHHHHHHcCCC
Confidence 568899998875 489999999999999999975
No 356
>PLN02591 tryptophan synthase
Probab=22.25 E-value=4.3e+02 Score=21.47 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=23.0
Q ss_pred CcEEEEcCCcc---ccHHHHHcCCeEEEEcCCC
Q 025190 175 RHALFLDDNIK---NVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 175 ~~~i~vGDs~~---Di~~a~~~G~~~v~v~~~~ 204 (256)
+.-+++|=+.+ |+..+...|...+.|++..
T Consensus 189 ~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSal 221 (250)
T PLN02591 189 DKPVAVGFGISKPEHAKQIAGWGADGVIVGSAM 221 (250)
T ss_pred CCceEEeCCCCCHHHHHHHHhcCCCEEEECHHH
Confidence 44567787775 7888888899999998654
No 357
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit. This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.
Probab=21.93 E-value=3.4e+02 Score=24.05 Aligned_cols=68 Identities=12% Similarity=0.074 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHcCCCCCc-EEEEcCCccc-cHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 159 SMDAMKLALHVANVDPRH-ALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~i~vGDs~~D-i~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
++...+.+++++|++.-. ...+-++..+ ...++..|.+.+.-+.......--.++.+.+||...+...
T Consensus 115 DK~~~r~~l~~~gip~pp~~~~~~~~~~e~~~~~~~ig~PvvvKP~~g~gs~Gv~~v~~~~el~~~~~~~ 184 (449)
T TIGR00514 115 DKVSAIETMKKAGVPCVPGSDGLVEDEEENVRIAKRIGYPVIIKATAGGGGRGMRVVREPDELVKSISMT 184 (449)
T ss_pred CHHHHHHHHHHCCCCCCCCcccCcCCHHHHHHHHHHhCCCEEEEeCCCCCCCccEEECCHHHHHHHHHHH
Confidence 446788899999996422 2112233333 3456778888775544333444566778888887776543
No 358
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=21.72 E-value=60 Score=25.14 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=11.8
Q ss_pred eEEEEecCCCccCC
Q 025190 6 NCLVFDLDDTLYPS 19 (256)
Q Consensus 6 k~viFD~DGTL~d~ 19 (256)
+.|-||+|||+.-.
T Consensus 59 ~~v~~D~~GT~m~i 72 (271)
T PF06901_consen 59 HTVTFDFQGTKMVI 72 (271)
T ss_pred eeEEEeccceEEEe
Confidence 57999999999754
No 359
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=21.11 E-value=1.5e+02 Score=23.63 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=27.1
Q ss_pred HHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecc
Q 025190 96 RNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFE 137 (256)
Q Consensus 96 ~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~ 137 (256)
.++|..|+++-. +||+++-+.++..+....+.+.||-++..+
T Consensus 2 ~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~en 45 (220)
T PF03332_consen 2 AELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPEN 45 (220)
T ss_dssp HHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGG
T ss_pred HHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCC
Confidence 578899988754 999998888877664223334566555544
No 360
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=20.96 E-value=4.3e+02 Score=23.94 Aligned_cols=30 Identities=30% Similarity=0.439 Sum_probs=23.5
Q ss_pred CCCCcEEEEcCCccccHHHHHc---CCeEEEEc
Q 025190 172 VDPRHALFLDDNIKNVTAGKAL---GLRTVLVG 201 (256)
Q Consensus 172 ~~~~~~i~vGDs~~Di~~a~~~---G~~~v~v~ 201 (256)
...-+++.||-++..+.+|..+ |.+++.+.
T Consensus 210 ~~~~dVvIIGgGpAGl~AA~~la~~G~~v~li~ 242 (515)
T TIGR03140 210 LDPYDVLVVGGGPAGAAAAIYAARKGLRTAMVA 242 (515)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 3456899999999998887765 78887774
No 361
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=20.69 E-value=4.5e+02 Score=21.07 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=22.3
Q ss_pred cEEEEcCCc---cccHHHHHcCCeEEEEcCCC
Q 025190 176 HALFLDDNI---KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 176 ~~i~vGDs~---~Di~~a~~~G~~~v~v~~~~ 204 (256)
..+.+|=+. .++..+..+|...+.+++..
T Consensus 186 ~~i~v~gGI~~~e~i~~~~~~gaD~vvvGSai 217 (244)
T PRK13125 186 KYLVVGFGLDSPEDARDALSAGADGVVVGTAF 217 (244)
T ss_pred CCEEEeCCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 347888877 46888888999999887653
No 362
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.45 E-value=1.5e+02 Score=21.28 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=24.6
Q ss_pred CChhHHHHHHhhhcCc---E-EEecC-ChHHHHHHHHhcCccccc
Q 025190 91 PDPQLRNLLCSITQRK---I-IFTNS-DRNHAITCLKRLEIADCF 130 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~---~-ivs~~-~~~~~~~~l~~~gl~~~f 130 (256)
-.+.++++++.|++++ + ++.++ ....-...++.+|++.+|
T Consensus 66 ~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~ 110 (132)
T TIGR00640 66 HLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAEIF 110 (132)
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCEEE
Confidence 3456677778887764 2 55554 444446678888965433
No 363
>PF04977 DivIC: Septum formation initiator; InterPro: IPR007060 DivIC, from the spore-forming, Gram-positive bacterium Bacillus subtilis, is necessary for both vegetative and sporulation septum formation []. These proteins are mainly composed of an N-terminal coiled-coil. DivIB, DivIC and FtsL inter-depend on each other for stabilisation and localisation. The latter two form a heterodimer. DivIC is always centre cell but the other two associate with it during septation [].; GO: 0007049 cell cycle
Probab=20.23 E-value=1.8e+02 Score=18.33 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=17.0
Q ss_pred CCCHHHHHHHHH-HcCC-CCCcEEEE
Q 025190 157 KPSMDAMKLALH-VANV-DPRHALFL 180 (256)
Q Consensus 157 Kp~~~~~~~~~~-~~~~-~~~~~i~v 180 (256)
+.+|..+...++ ++|+ .|.+.+++
T Consensus 51 ~~~~~~ie~~AR~~lgm~~~~E~v~~ 76 (80)
T PF04977_consen 51 KNDPDYIEKVAREKLGMVKPGEIVFK 76 (80)
T ss_pred cCCHHHHHHHHHHHcCCcCCCCEEEe
Confidence 346688888888 7887 56666654
No 364
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=20.22 E-value=1.3e+02 Score=20.18 Aligned_cols=35 Identities=3% Similarity=-0.107 Sum_probs=25.0
Q ss_pred HHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccc
Q 025190 97 NLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFD 131 (256)
Q Consensus 97 ~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~ 131 (256)
.+.+.++++|. ++=.+..+.++..++..|+.+.+.
T Consensus 62 ~~~~~~~~~g~~l~l~~~~~~v~~~l~~~gl~~~~~ 97 (106)
T TIGR02886 62 GRYKKIKNEGGEVIVCNVSPAVKRLFELSGLFKIIR 97 (106)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCceEEE
Confidence 55677777776 444445567888999999887763
No 365
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=20.22 E-value=2.8e+02 Score=24.46 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=43.8
Q ss_pred CCHHHHHHHHHHcCCCCCcE--EEEcCCcccc-HHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 158 PSMDAMKLALHVANVDPRHA--LFLDDNIKNV-TAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~--i~vGDs~~Di-~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
-++...+.+++++|++.-.. ..+ ++..++ ..+...|.+++.-+.......--.++.+.++|.+.++..
T Consensus 114 ~dK~~~k~~l~~~gIp~p~~~~~~~-~~~~e~~~~~~~~~~P~VvKP~~g~gs~Gv~iv~~~~el~~a~~~~ 184 (450)
T PRK06111 114 GSKIEARRAMQAAGVPVVPGITTNL-EDAEEAIAIARQIGYPVMLKASAGGGGIGMQLVETEQELTKAFESN 184 (450)
T ss_pred CCHHHHHHHHHHCCCCCCCCcCcCc-CCHHHHHHHHHHhCCCEEEEeCCCCCCceEEEECCHHHHHHHHHHH
Confidence 34567788999999974332 233 555553 446677888776654444444567788888888777653
No 366
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=20.10 E-value=5.4e+02 Score=21.76 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=14.8
Q ss_pred EEEcCCccccHHHHHcCCeEEEE
Q 025190 178 LFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 178 i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
++||..---+..|..+|.+++.+
T Consensus 265 l~v~nDSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 265 LFIGVDSAPAHIAAAVNTPLICL 287 (352)
T ss_pred EEEecCCHHHHHHHHcCCCEEEE
Confidence 35555555567777778777654
No 367
>COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=20.01 E-value=2.1e+02 Score=24.62 Aligned_cols=46 Identities=22% Similarity=0.135 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+.=+..++....++++. .+++|+.|..-++..-+.+||-+|--..+
T Consensus 285 idy~~~i~~~~~q~~v~-~RvlYvhd~~lpvllr~a~GmVTvNsTsG 330 (403)
T COG3562 285 IDYPRDIKRRFVQYEVK-GRVLYVHDVPLPVLLRHALGMVTVNSTSG 330 (403)
T ss_pred hhhHHHHHHHHHHhccC-ceEEEecCCCchHHHHhccceEEEccccc
Confidence 55556677777788764 68999999999999999999887754443
Done!