Query 025193
Match_columns 256
No_of_seqs 146 out of 1023
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 05:31:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025193.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025193hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n10_A PHL P I, pollen allerge 100.0 1.2E-63 4.3E-68 441.7 24.1 211 30-254 15-241 (241)
2 2hcz_X Beta-expansin 1A; domai 100.0 9.2E-64 3.2E-68 443.6 23.0 213 30-256 15-244 (245)
3 3d30_A YOAJ, expansin like pro 100.0 9.3E-53 3.2E-57 365.3 23.8 192 32-256 4-206 (208)
4 1wc2_A Endoglucanase; hydrolas 100.0 6.2E-31 2.1E-35 220.2 8.5 125 32-166 12-164 (181)
5 3ft1_A PHL P 3 allergen; beta- 100.0 3E-28 1E-32 188.0 12.0 91 164-256 3-99 (100)
6 2jnz_A PHL P 3 allergen; timot 99.9 1.5E-26 5.1E-31 180.5 12.2 89 164-254 14-107 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 2.2E-26 7.6E-31 176.4 -0.7 88 164-254 3-95 (96)
8 1bw3_A Barwin, basic barley SE 99.7 3.1E-17 1.1E-21 130.6 6.0 62 78-160 58-124 (125)
9 4avr_A PA4485; unknown functio 99.3 3.2E-11 1.1E-15 91.6 11.4 94 35-158 2-95 (95)
10 2kqa_A Cerato-platanin; elicit 97.9 5.2E-05 1.8E-09 60.2 8.1 66 69-158 52-120 (129)
11 3sul_A Cerato-platanin-like pr 97.8 5.6E-05 1.9E-09 59.6 7.9 67 69-158 46-116 (122)
12 3m3g_A EPL1 protein; fungal, p 97.8 7E-05 2.4E-09 58.9 7.7 65 69-158 46-114 (120)
13 3suj_A Cerato-platanin 1; doub 97.7 6.3E-05 2.1E-09 59.7 6.4 70 69-158 46-119 (127)
14 3suk_A Cerato-platanin-like pr 97.6 0.00014 4.8E-09 57.6 7.5 69 69-158 47-119 (125)
15 3sum_A Cerato-platanin-like pr 97.6 0.00019 6.6E-09 57.3 8.1 64 68-158 49-121 (136)
16 2eng_A Endoglucanase V; cellul 94.1 0.035 1.2E-06 47.2 3.5 53 69-136 72-124 (210)
17 3nrl_A Uncharacterized protein 63.5 6.8 0.00023 28.2 3.5 21 72-92 22-42 (81)
18 3pe9_A Fibronectin(III)-like m 36.2 85 0.0029 22.9 5.9 46 186-234 29-76 (98)
19 2a9d_A Sulfite oxidase; molybd 33.0 60 0.0021 29.6 5.5 24 182-205 278-302 (372)
20 2blf_A SORA, sulfite\:cytochro 30.0 50 0.0017 30.1 4.5 50 184-233 289-347 (373)
21 2kct_A Cytochrome C-type bioge 29.8 49 0.0017 24.3 3.6 28 222-249 30-61 (94)
22 2kvz_A ISPE; structural genomi 29.5 50 0.0017 23.8 3.5 32 221-254 7-38 (85)
23 1ogp_A Sulfite oxidase; oxidor 28.5 80 0.0027 29.0 5.6 26 180-205 289-315 (393)
24 1sox_A Sulfite oxidase; oxidor 28.1 79 0.0027 29.7 5.6 24 182-205 372-396 (466)
25 2kt7_A Putative peptidoglycan 27.8 75 0.0026 23.6 4.3 30 220-254 5-34 (102)
26 2c9r_A COPC, copper resistance 26.9 31 0.0011 25.4 2.1 27 144-170 73-102 (102)
27 1lyq_A PCOC copper resistance 26.1 33 0.0011 25.4 2.1 27 144-170 75-104 (104)
28 1sr3_A APO-CCME; OB fold, beta 23.8 66 0.0023 25.2 3.5 28 222-249 50-78 (136)
29 1j6q_A Cytochrome C maturation 20.2 96 0.0033 24.3 3.8 28 222-249 54-83 (136)
No 1
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=1.2e-63 Score=441.66 Aligned_cols=211 Identities=30% Similarity=0.593 Sum_probs=189.1
Q ss_pred CCCCceEEEEEEecCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEE
Q 025193 30 DYGGWQIAHATFYGGSDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTA 107 (256)
Q Consensus 30 ~~~~~~~g~aT~Y~~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V 107 (256)
++++|+.|+||||+++++.++ .+|||||++++..|++.++||+|+++|++|+.||+||||+|.+++ .|.+++|+|+|
T Consensus 15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~-~C~~~~v~V~V 93 (241)
T 1n10_A 15 YGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPE-ACSGEPVVVHI 93 (241)
T ss_dssp CCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSST-TBCSCCEEEEE
T ss_pred ccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCC-ccCCCCEEEEE
Confidence 678999999999999887666 789999999887888999999999999999999999999998754 69999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh-------hcCCeeeEEEEEeecccCC--ceeEEEc--CCccce
Q 025193 108 TNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ-------YRAGIVPVLFRRVPCVKKG--GIRFTIN--GHSYFN 176 (256)
Q Consensus 108 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-------~~~G~v~i~wr~V~C~~~g--ni~~~v~--ss~~w~ 176 (256)
||+|+ |++++.|||||+.||.+||. ...|+++|+||||+|+++| ||+|+++ +++||+
T Consensus 94 tD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~ 161 (241)
T 1n10_A 94 TDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYL 161 (241)
T ss_dssp EEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEE
T ss_pred eEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceE
Confidence 99995 65567999999999999999 6899999999999999984 8999999 689999
Q ss_pred EEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCcEEec
Q 025193 177 LVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSY--LDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253 (256)
Q Consensus 177 av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~ 253 (256)
+|||+|++|.++|++|||++++ +.|++|+|+||++|+++.. +.+ ||+||||+.+|++|+++||||++|++|++|++
T Consensus 162 ~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~ 240 (241)
T 1n10_A 162 ALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYES 240 (241)
T ss_dssp EEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEEC
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEeC
Confidence 9999999988999999999987 6899999999999999875 676 99999999999999999999999999999998
Q ss_pred C
Q 025193 254 S 254 (256)
Q Consensus 254 ~ 254 (256)
+
T Consensus 241 ~ 241 (241)
T 1n10_A 241 K 241 (241)
T ss_dssp -
T ss_pred C
Confidence 4
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=9.2e-64 Score=443.62 Aligned_cols=213 Identities=32% Similarity=0.647 Sum_probs=197.0
Q ss_pred CCCCceEEEEEEecCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEE
Q 025193 30 DYGGWQIAHATFYGGSDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTA 107 (256)
Q Consensus 30 ~~~~~~~g~aT~Y~~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V 107 (256)
+.++|+.|+||||+++++.++ .+|||||++++..|++.++||+|+++|++|+.||+||||+|.++ ..|.+++|+|+|
T Consensus 15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~-~~C~~~sv~V~V 93 (245)
T 2hcz_X 15 YNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEK-PECSGNPVTVYI 93 (245)
T ss_dssp CCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSS-SSBCSSCEEEEE
T ss_pred cCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCC-CccCCCCEEEEE
Confidence 678999999999999887666 68999999988778899999999999999999999999999874 479989999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh-------hcCCeeeEEEEEeecccCC--ceeEEEc--CCccce
Q 025193 108 TNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ-------YRAGIVPVLFRRVPCVKKG--GIRFTIN--GHSYFN 176 (256)
Q Consensus 108 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-------~~~G~v~i~wr~V~C~~~g--ni~~~v~--ss~~w~ 176 (256)
||+||+ ++++.|||||+.||++||. ...|+++|+||||+|+++| ||+|+++ +++||+
T Consensus 94 tD~C~C------------~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~ 161 (245)
T 2hcz_X 94 TDMNYE------------PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYL 161 (245)
T ss_dssp EEECCC------------TTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCC
T ss_pred EeccCC------------CCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceE
Confidence 999984 3357999999999999999 6899999999999999983 7999998 689999
Q ss_pred EEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCcEEec
Q 025193 177 LVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSY--LDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253 (256)
Q Consensus 177 av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~ 253 (256)
+|||+|++|+++|++|||++++ +.|++|+|+||++|+++.. +.+ ||+||||+.+|++|+++||||++|++|++|++
T Consensus 162 avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~ 240 (245)
T 2hcz_X 162 AVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTS 240 (245)
T ss_dssp CEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEEC
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEeC
Confidence 9999999988999999999987 5899999999999999875 676 99999999999999999999999999999999
Q ss_pred C-CC
Q 025193 254 S-QL 256 (256)
Q Consensus 254 ~-~~ 256 (256)
+ ||
T Consensus 241 ~~qf 244 (245)
T 2hcz_X 241 NVQF 244 (245)
T ss_dssp SCCC
T ss_pred cccc
Confidence 8 98
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=9.3e-53 Score=365.27 Aligned_cols=192 Identities=20% Similarity=0.279 Sum_probs=173.8
Q ss_pred CCceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCC----CCCCceEEEEEcCCCCCcCCCeEEEEE
Q 025193 32 GGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG----LSCGACYEIRCANDPQWCLPGTITVTA 107 (256)
Q Consensus 32 ~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~eV~c~~~p~~C~~~sv~v~V 107 (256)
++.+.|+||||++.. .+||||+.. .+++.++||+|..+|++| ..||+||||+|. +++|+|+|
T Consensus 4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~-------~gsv~V~v 69 (208)
T 3d30_A 4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP-------KGKTTVYV 69 (208)
T ss_dssp TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET-------TEEEEEEE
T ss_pred CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC-------CCcEEEEE
Confidence 456899999999753 379999864 356789999999999987 799999999993 35899999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCCceeEEEc--CCccceEEEEEeecC
Q 025193 108 TNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTIN--GHSYFNLVLITNVGG 185 (256)
Q Consensus 108 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~gni~~~v~--ss~~w~av~v~n~~g 185 (256)
+|+||. |. ..|||||+.||.+||.++.|+++|+||+|+|+++|+|+|+++ +++||++|||+|+++
T Consensus 70 ~D~CP~-----------C~--~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~g 136 (208)
T 3d30_A 70 TDLYPE-----------GA--RGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY 136 (208)
T ss_dssp EEECTT-----------CC--TTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCSS
T ss_pred EECCCC-----------CC--CCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecCC
Confidence 999998 95 599999999999999999999999999999999999999999 799999999999987
Q ss_pred CcceEEEEEEccCCceeecccCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCC----CcEEecC-CC
Q 025193 186 AGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKF----GQTFEGS-QL 256 (256)
Q Consensus 186 ~~~I~sVeI~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvTs~~G~~v~~~~vipa~w~~----G~~y~~~-~~ 256 (256)
+|++|||+++ +.|++|+|+++|+|..+..+. .||+||||+.+|++| .+|||++|++ |.+|+++ ||
T Consensus 137 --~v~~v~i~~~-~~W~~m~r~~~n~~~~~~~~~-~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf 206 (208)
T 3d30_A 137 --PVMKMEYEKD-GKWINMEKMDYNHFVSTNLGT-GSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF 206 (208)
T ss_dssp --CEEEEEEEET-TEEEEEEECTTSCEEEECCCS-SSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred --CEEEEEEecC-CcEEEccccccceeecCCCCC-CCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence 8999999988 689999999999898765444 599999999999999 7999999997 8999999 98
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.97 E-value=6.2e-31 Score=220.23 Aligned_cols=125 Identities=27% Similarity=0.438 Sum_probs=104.3
Q ss_pred CCceEEEEEEecCCCCCCCCccccCCC-----cCCCCCCCCeEEEechhccCCC------CCCCceEEEEEcCCC-----
Q 025193 32 GGWQIAHATFYGGSDASGTMGGACGYG-----NLYSQGYGTNTAALSTALFNNG------LSCGACYEIRCANDP----- 95 (256)
Q Consensus 32 ~~~~~g~aT~Y~~~~~~~~~~GaCGy~-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~eV~c~~~p----- 95 (256)
.+|..++||||++.. +|||||+ ++.+++++.++||+|+++|++| +.||+||||+|.+++
T Consensus 12 ~g~~~A~aT~Yg~~~-----gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg 86 (181)
T 1wc2_A 12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (181)
T ss_dssp TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceeEecCCC-----CcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence 469999999999864 7999999 4555567889999999999997 899999999997643
Q ss_pred CCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCC-----------CCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCC
Q 025193 96 QWCLPG-TITVTATNFCPPNYALSNDNGGWCNPP-----------LQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKG 163 (256)
Q Consensus 96 ~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~-----------~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~g 163 (256)
..|..+ +|+|||||+||.+ ++|++||.++ +.||||+..| .+||....|+++|+||||+|+..+
T Consensus 87 ~~~~~g~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~ 161 (181)
T 1wc2_A 87 GPVREGLSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEH 161 (181)
T ss_dssp CCCCTTCEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHH
T ss_pred ccCCCCCeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCC
Confidence 224445 8999999999953 3578999753 6899999999 899998999999999999998744
Q ss_pred cee
Q 025193 164 GIR 166 (256)
Q Consensus 164 ni~ 166 (256)
++.
T Consensus 162 ~~~ 164 (181)
T 1wc2_A 162 NHD 164 (181)
T ss_dssp HHC
T ss_pred CcC
Confidence 443
No 5
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.95 E-value=3e-28 Score=188.02 Aligned_cols=91 Identities=19% Similarity=0.392 Sum_probs=86.2
Q ss_pred ceeEEEc--CCccceEEEEEeecCCcceEEEEEEccCC-ceeecccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025193 164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGSKT-GWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSY 238 (256)
Q Consensus 164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~g~-~W~~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G~~v~~~ 238 (256)
+|+|+|+ |++||++|+|.|++|+++|.+|||+++++ .|++|+| ||+.|+++. +|.| ||+||||+.+|++++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~~ 80 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 80 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 7999998 68999999999999999999999999984 7999999 999999986 6887 99999999999999999
Q ss_pred cccCCCCCCCcEEecC-CC
Q 025193 239 NVVPANWKFGQTFEGS-QL 256 (256)
Q Consensus 239 ~vipa~w~~G~~y~~~-~~ 256 (256)
||||++|++|++|+++ ||
T Consensus 81 nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 81 EVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEECTTCCTTCEECCCCBC
T ss_pred eEeCCCCCCCcEEeccccc
Confidence 9999999999999999 76
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.94 E-value=1.5e-26 Score=180.47 Aligned_cols=89 Identities=18% Similarity=0.418 Sum_probs=83.8
Q ss_pred ceeEEEc--CCccceEEEEEeecCCcceEEEEEEc-cCCceeecccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025193 164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKG-SKTGWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSY 238 (256)
Q Consensus 164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~-~g~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G~~v~~~ 238 (256)
||.|+|+ |++||++|+|.|++|+++|++|||++ +...|++|+|. |++|+++. +|.| ||+||||+.+|++++++
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~ 91 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 91 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 8999998 78999999999999999999999997 44789999999 99999986 7887 99999999999999999
Q ss_pred cccCCCCCCCcEEecC
Q 025193 239 NVVPANWKFGQTFEGS 254 (256)
Q Consensus 239 ~vipa~w~~G~~y~~~ 254 (256)
||||++|++|+||+++
T Consensus 92 nViPa~W~~Gqty~s~ 107 (108)
T 2jnz_A 92 EVIPTAFSIGKTYKPE 107 (108)
T ss_dssp EEECSSCCTTCEECCC
T ss_pred eEECCCCCCCCEEeCC
Confidence 9999999999999985
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.91 E-value=2.2e-26 Score=176.42 Aligned_cols=88 Identities=25% Similarity=0.468 Sum_probs=81.5
Q ss_pred ceeEEEc--CCccceEEEEEeecCCcceEEEEEEcc-CCceeecccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025193 164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGS-KTGWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSY 238 (256)
Q Consensus 164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~-g~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G~~v~~~ 238 (256)
+|+|+|+ |++||++|+|.|++ ++|++|||+++ .+.|++|+|.||++|+++. +|.| ||+||||+.+|++++++
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence 7899998 79999999999998 58999999995 4789999999999999987 5677 99999999999999999
Q ss_pred cccCCCCCCCcEEecC
Q 025193 239 NVVPANWKFGQTFEGS 254 (256)
Q Consensus 239 ~vipa~w~~G~~y~~~ 254 (256)
||||++|++|++|+++
T Consensus 80 nViP~~W~~G~ty~~~ 95 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPE 95 (96)
T ss_dssp SCSCSSCCSSSCCCC-
T ss_pred eEeCCCCCCCCEEeCC
Confidence 9999999999999985
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.68 E-value=3.1e-17 Score=130.57 Aligned_cols=62 Identities=24% Similarity=0.499 Sum_probs=55.7
Q ss_pred CCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeC-hHHHHHhhh----hcCCeeeE
Q 025193 78 NNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLA-QPSFLHIAQ----YRAGIVPV 152 (256)
Q Consensus 78 ~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS-~~AF~~la~----~~~G~v~i 152 (256)
+++..||+|++|++..+ +++|+|+|+|+||. | +|||| +.||++|+. ++.|+++|
T Consensus 58 ~~g~~CG~cv~Vtn~~n-----GksV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V 116 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPAT-----GAQITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV 116 (125)
T ss_dssp CSGGGTTCEEEEEETTT-----TEEEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred CCCcccCCEEEeEeCCC-----CCEEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence 77889999999999642 45999999999997 4 49999 999999998 78999999
Q ss_pred EEEEeecc
Q 025193 153 LFRRVPCV 160 (256)
Q Consensus 153 ~wr~V~C~ 160 (256)
+|++|+|+
T Consensus 117 ~w~~V~C~ 124 (125)
T 1bw3_A 117 NYQFVDCR 124 (125)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999996
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.29 E-value=3.2e-11 Score=91.61 Aligned_cols=94 Identities=20% Similarity=0.273 Sum_probs=73.4
Q ss_pred eEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCC
Q 025193 35 QIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPN 114 (256)
Q Consensus 35 ~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~ 114 (256)
..|.|+||++.-. -...|||-... ...++||-. ...||..++|+...+ +++|+|+|.|+||.
T Consensus 2 ~~G~ASwYg~~f~--G~~TA~Ge~~~----~~~~tAAH~------tlP~gt~vrVtNl~n-----GksVvVrVnDRGP~- 63 (95)
T 4avr_A 2 DTGEASYYGSRHA--GLRTASGERYN----PNAMTAAHR------TLPFGARVRVTNLDN-----RRSVVVRINDRGPF- 63 (95)
T ss_dssp EEEEEEECCGGGT--TSBCTTSCBCC----TTSCEEECS------SSCTTCEEEEEETTT-----CCEEEEEEEECCCC-
T ss_pred CEEEEEEECCccC--CCCCCCccCcC----CCCCEEEcC------CCCCCcEEEEEECCC-----CcEEEEEEccCCCC-
Confidence 4799999996321 13588875432 234677765 347999999998764 56999999999998
Q ss_pred CCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEee
Q 025193 115 YALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVP 158 (256)
Q Consensus 115 ~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~ 158 (256)
|.+ ..+|||..||++|+..+.|+.+|+|+.+.
T Consensus 64 ----------~~g--riIDLS~aAa~~Lg~~~~G~~~V~ve~~~ 95 (95)
T 4avr_A 64 ----------RRG--RIIDVSRKAAEGLGMIRSGVAPVRIESLD 95 (95)
T ss_dssp ----------STT--EEEEECHHHHHHHTCTTTSCEEEEEEEC-
T ss_pred ----------CCC--CEEEeCHHHHHHhCCcCCCEEEEEEEEeC
Confidence 763 67999999999999999999999999863
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=97.86 E-value=5.2e-05 Score=60.18 Aligned_cols=66 Identities=21% Similarity=0.428 Sum_probs=53.3
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh-hc
Q 025193 69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ-YR 146 (256)
Q Consensus 69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-~~ 146 (256)
|.+... +-|+ ...||.|+||+-.. +++|.|+.+|.=+ ..|+++..||+.|.. ..
T Consensus 52 IGga~~iagWN-S~~CGtC~~lty~n------g~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~~ 107 (129)
T 2kqa_A 52 VGGIPDIAGWD-SPSCGTCWKVTIPN------GNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGSTE 107 (129)
T ss_dssp EEEETTCCSTT-CTTCSCEEEEEETT------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSSS
T ss_pred eccchhhccCC-CCCCCceEEEEEcC------CCEEEEEEEccCC-----------------CceeehHHHHHHhcCCcc
Confidence 555544 3466 78999999999831 4599999999733 469999999999987 56
Q ss_pred CCee-eEEEEEee
Q 025193 147 AGIV-PVLFRRVP 158 (256)
Q Consensus 147 ~G~v-~i~wr~V~ 158 (256)
.|+| +++|++|+
T Consensus 108 lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 108 AGRVDNVNYVQVD 120 (129)
T ss_dssp SCCBCSCEEEECC
T ss_pred cCcEeEEEEEEcC
Confidence 8999 99999996
No 11
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=97.83 E-value=5.6e-05 Score=59.59 Aligned_cols=67 Identities=25% Similarity=0.402 Sum_probs=52.4
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193 69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY-- 145 (256)
Q Consensus 69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 145 (256)
|.+... +-|++ ..||.|+|++-... +++|.|..+|.=+ ..|+|+.+||+.|.+-
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~~-----g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a 102 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSGT-----GKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNGQA 102 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETTT-----TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred cccccccccCCC-CCCCceEEEEEcCC-----CcEEEEEEEecCC-----------------CceeehHHHHHHhcCCcc
Confidence 544443 44665 89999999998531 3499999999743 4599999999999752
Q ss_pred -cCCeeeEEEEEee
Q 025193 146 -RAGIVPVLFRRVP 158 (256)
Q Consensus 146 -~~G~v~i~wr~V~ 158 (256)
..|+|++++++|+
T Consensus 103 ~~lG~V~a~~~qV~ 116 (122)
T 3sul_A 103 VALGNIDVTATLVD 116 (122)
T ss_dssp HHHSEEEEEEEEEC
T ss_pred eecceEeEEEEEcC
Confidence 4599999999997
No 12
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=97.78 E-value=7e-05 Score=58.88 Aligned_cols=65 Identities=25% Similarity=0.424 Sum_probs=51.2
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193 69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY-- 145 (256)
Q Consensus 69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 145 (256)
|.+... .-|+ ...||.|+|++-. +++|.|..+|.=+ ..|+|+.+||+.|..-
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~-------g~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~a 100 (120)
T 3m3g_A 46 IGGAAAVAGWN-SASCGTCWKLQYS-------GHTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQA 100 (120)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEET-------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred cccccccccCC-CCCCCceEEEEEC-------CeEEEEEEEecCC-----------------CceeecHHHHHHhhCCcc
Confidence 555443 3465 4789999999984 3499999999743 4599999999999752
Q ss_pred -cCCeeeEEEEEee
Q 025193 146 -RAGIVPVLFRRVP 158 (256)
Q Consensus 146 -~~G~v~i~wr~V~ 158 (256)
..|+|++++++|+
T Consensus 101 ~~lG~V~a~~~~V~ 114 (120)
T 3m3g_A 101 VQLGRVSATATQVP 114 (120)
T ss_dssp HHHCEEECEEEEEC
T ss_pred eeeeeEeEEEEEcC
Confidence 4599999999997
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.70 E-value=6.3e-05 Score=59.72 Aligned_cols=70 Identities=23% Similarity=0.414 Sum_probs=52.1
Q ss_pred EEEec-hhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193 69 TAALS-TALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY-- 145 (256)
Q Consensus 69 ~aA~s-~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 145 (256)
|.+.. -.-|+ ...||.|+|++-.+.. =..++|.|..+|.=+ ..|+|+.+||+.|.+-
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~g~~--~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g~a 105 (127)
T 3suj_A 46 IGGSSDIAGYN-SPNCGSCYQLTYSSAH--TTPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNKRA 105 (127)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEECCSS--SCCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred eccccccccCC-CCCCCceEEEEECCCC--CcceEEEEEEEecCC-----------------CceeecHHHHHHhcCCcc
Confidence 55443 24465 4789999999986410 012499999999743 4599999999999753
Q ss_pred -cCCeeeEEEEEee
Q 025193 146 -RAGIVPVLFRRVP 158 (256)
Q Consensus 146 -~~G~v~i~wr~V~ 158 (256)
..|+|+++|++|+
T Consensus 106 ~~lG~V~~~~~~V~ 119 (127)
T 3suj_A 106 EELGTVNVDVRKVD 119 (127)
T ss_dssp HHHSSEEEEEEEEC
T ss_pred ccceeEEEEEEEeC
Confidence 4589999999997
No 14
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.64 E-value=0.00014 Score=57.60 Aligned_cols=69 Identities=25% Similarity=0.405 Sum_probs=52.0
Q ss_pred EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193 69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY-- 145 (256)
Q Consensus 69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-- 145 (256)
|.+... .-|+ ...||.|+|++-.+ |. ..++|.|..+|.=+ ..|+|+.+||+.|.+-
T Consensus 47 IGg~~~i~gwn-S~~CGtC~~lty~g-~~--~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a 105 (125)
T 3suk_A 47 IGASSDIGGFN-SPACGNCYTISFTF-QG--VTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNGNA 105 (125)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEEEE-TT--EEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred eccccccccCC-CCCCCeeEEEEEcC-CC--cceEEEEEEEecCC-----------------CceeecHHHHHHhcCCcc
Confidence 555443 4465 47899999999854 10 02499999999743 4599999999999762
Q ss_pred -cCCeeeEEEEEee
Q 025193 146 -RAGIVPVLFRRVP 158 (256)
Q Consensus 146 -~~G~v~i~wr~V~ 158 (256)
..|+|+++|++|+
T Consensus 106 ~~lG~V~~~~~~V~ 119 (125)
T 3suk_A 106 VALGTIDVQSQQVA 119 (125)
T ss_dssp HHHCEEEEEEEEEC
T ss_pred cccceEeEEEEEcC
Confidence 4599999999997
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.62 E-value=0.00019 Score=57.28 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=50.6
Q ss_pred eEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCC-CeeeChHHHHHhhhh-
Q 025193 68 NTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQ-HFDLAQPSFLHIAQY- 145 (256)
Q Consensus 68 ~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~-~~DLS~~AF~~la~~- 145 (256)
.|.++. |+ ...||.|+||+-. +++|.|..+|.=.+ + -|||+..||+.|..-
T Consensus 49 ~igg~~---wn-s~~CGtCwkLtY~-------G~sI~vlaID~a~~----------------g~~FnIs~~Amn~LT~G~ 101 (136)
T 3sum_A 49 HFVAAP---EA-QTECGSCWKLRYK-------GNHAFVTVVDRVEE----------------ANLFVGGTDLVKNLTTFN 101 (136)
T ss_dssp SEEECC---BT-TBCTTCEEEEEET-------TEEEEEEEEECCCS----------------TTEEEECHHHHHHHTCBT
T ss_pred cccccc---cC-CCCCCceEEEEEC-------CeEEEEEEEecCCC----------------cceEeehHHHHHHHhCCC
Confidence 366665 54 5789999999984 34999999997432 2 299999999999752
Q ss_pred ------cCCeeeE-EEEEee
Q 025193 146 ------RAGIVPV-LFRRVP 158 (256)
Q Consensus 146 ------~~G~v~i-~wr~V~ 158 (256)
..|+|++ +|++|+
T Consensus 102 ~a~~a~elG~Vda~~~~qVd 121 (136)
T 3sum_A 102 GAPEGYDWGTAQLFSAYQVD 121 (136)
T ss_dssp TBCHHHHHSEEECSEEEEEC
T ss_pred ccccceecceeeeeEEEEcC
Confidence 3599999 999997
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=94.06 E-value=0.035 Score=47.24 Aligned_cols=53 Identities=32% Similarity=0.347 Sum_probs=34.5
Q ss_pred EEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeCh
Q 025193 69 TAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQ 136 (256)
Q Consensus 69 ~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~ 136 (256)
+||++-.--.....|++|||++=++.+ ..+++.+|+||+...+- ..+||||.-
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~--~~GKkmiVQ~TNtG~Dl-------------~~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGDL-------------GSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCCC--cCCCEEEEEEecccCCC-------------CCCceeEec
Confidence 566653211223579999999988643 44679999999987651 258999863
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=63.46 E-value=6.8 Score=28.21 Aligned_cols=21 Identities=29% Similarity=0.925 Sum_probs=16.6
Q ss_pred echhccCCCCCCCceEEEEEc
Q 025193 72 LSTALFNNGLSCGACYEIRCA 92 (256)
Q Consensus 72 ~s~~~~~~g~~CG~C~eV~c~ 92 (256)
.+...|..|..||.||||.-.
T Consensus 22 ~~~~~~ygGlHCGE~feV~v~ 42 (81)
T 3nrl_A 22 FDLESFYGGLHCGECFDVKVK 42 (81)
T ss_dssp EETTEECCCCCTTCEEEEEET
T ss_pred eccccccCCcccccEEEEEEC
Confidence 345557789999999999874
No 18
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=36.21 E-value=85 Score=22.89 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=28.4
Q ss_pred CcceEEEEEEccCC-ceeecccCCCceEEeCCCCCC-cceEEEEEecCCcE
Q 025193 186 AGDVKAVFIKGSKT-GWQAMSRNWGQNWQSNSYLDG-QSLSFKVTTSDGRT 234 (256)
Q Consensus 186 ~~~I~sVeI~~~g~-~W~~m~r~~g~~W~~~~~~~g-~p~~vRvTs~~G~~ 234 (256)
++.|.+||+.-+|. -...-.+.|.-.|... .| -.|.+|.||..|..
T Consensus 29 dg~V~kVef~vdg~~vg~dt~apy~~~w~~~---~G~htl~a~AtD~~G~~ 76 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDREAPYEYEWKAV---EGNHEISVIAYDDDDAA 76 (98)
T ss_dssp SSCEEEEEEEETTEEEEEECSSSEEEEEECC---SEEEEEEEEEEETTCCB
T ss_pred CCCEEEEEEEECCEEecccccCCEEEEEEcC---CccEEEEEEEEECCCCE
Confidence 45799999997762 2233344444456543 33 25777778888864
No 19
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=33.01 E-value=60 Score=29.57 Aligned_cols=24 Identities=21% Similarity=0.316 Sum_probs=17.2
Q ss_pred eecCCcceEEEEEEccC-Cceeecc
Q 025193 182 NVGGAGDVKAVFIKGSK-TGWQAMS 205 (256)
Q Consensus 182 n~~g~~~I~sVeI~~~g-~~W~~m~ 205 (256)
..+|..+|++|||..++ .+|+...
T Consensus 278 ~sGgg~~I~rVEVS~DgG~tW~~A~ 302 (372)
T 2a9d_A 278 WSGGGREVVRVDVSLDGGRTWKVAR 302 (372)
T ss_dssp ECSTTCCEEEEEEESBSSSSCEECE
T ss_pred EcCCCCCEEEEEEEcCCCCcceEeE
Confidence 43333369999999887 6998654
No 20
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=30.05 E-value=50 Score=30.10 Aligned_cols=50 Identities=18% Similarity=0.452 Sum_probs=30.1
Q ss_pred cCCcceEEEEEEccC-CceeecccC--CC----ceEEeCC-CCCC-cceEEEEEecCCc
Q 025193 184 GGAGDVKAVFIKGSK-TGWQAMSRN--WG----QNWQSNS-YLDG-QSLSFKVTTSDGR 233 (256)
Q Consensus 184 ~g~~~I~sVeI~~~g-~~W~~m~r~--~g----~~W~~~~-~~~g-~p~~vRvTs~~G~ 233 (256)
+|...|+.|||+.+| .+|+..+-. .+ -.|++.- ...| --+.+|-+|..|.
T Consensus 289 ~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~ 347 (373)
T 2blf_A 289 DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNARGE 347 (373)
T ss_dssp CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEETTSC
T ss_pred cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEcCCCC
Confidence 445689999999887 699854432 11 1355442 2233 1355777887764
No 21
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=29.84 E-value=49 Score=24.29 Aligned_cols=28 Identities=21% Similarity=0.423 Sum_probs=20.7
Q ss_pred ceEEEEEecC--Cc--EEEEccccCCCCCCCc
Q 025193 222 SLSFKVTTSD--GR--TITSYNVVPANWKFGQ 249 (256)
Q Consensus 222 p~~vRvTs~~--G~--~v~~~~vipa~w~~G~ 249 (256)
-++|+|||.+ ++ .|.++.++|..|+.|.
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGq 61 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGV 61 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTC
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCC
Confidence 5888888862 44 3556789999998875
No 22
>2kvz_A ISPE; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Listeria monocytogenes}
Probab=29.50 E-value=50 Score=23.77 Aligned_cols=32 Identities=6% Similarity=0.155 Sum_probs=26.7
Q ss_pred cceEEEEEecCCcEEEEccccCCCCCCCcEEecC
Q 025193 221 QSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGS 254 (256)
Q Consensus 221 ~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~~ 254 (256)
.|+.|+..|.+|+.|....++- ...|..|++.
T Consensus 7 ~~VtV~YvDe~Gn~La~~~~lt--G~vG~~Y~t~ 38 (85)
T 2kvz_A 7 NQVTVNYLDENNTSIAPSLYLS--GLFNEAYNVP 38 (85)
T ss_dssp CCEEEEEECSSSCEEEEEEEEC--CCTTCCCCCC
T ss_pred CeEEEEEECCCCCCCCCCeEEe--eeCCCcceec
Confidence 5899999999999998888775 5678888765
No 23
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=28.53 E-value=80 Score=28.96 Aligned_cols=26 Identities=23% Similarity=0.334 Sum_probs=18.9
Q ss_pred EEeecCCcceEEEEEEccC-Cceeecc
Q 025193 180 ITNVGGAGDVKAVFIKGSK-TGWQAMS 205 (256)
Q Consensus 180 v~n~~g~~~I~sVeI~~~g-~~W~~m~ 205 (256)
..+.+|...|+.|||..+| .+|+...
T Consensus 289 ~A~sGgg~~I~rVEVS~DgG~tW~~A~ 315 (393)
T 1ogp_A 289 YAVSGGGRGIERVDISLDGGKNWVEAS 315 (393)
T ss_dssp EEECSTTCCEEEEEEESSTTSSCEECE
T ss_pred EEEcCCCCCEEEEEEEcCCCCCceEee
Confidence 4444544589999999887 6998654
No 24
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=28.13 E-value=79 Score=29.68 Aligned_cols=24 Identities=21% Similarity=0.316 Sum_probs=17.2
Q ss_pred eecCCcceEEEEEEccC-Cceeecc
Q 025193 182 NVGGAGDVKAVFIKGSK-TGWQAMS 205 (256)
Q Consensus 182 n~~g~~~I~sVeI~~~g-~~W~~m~ 205 (256)
..+|..+|+.|||..++ .+|+...
T Consensus 372 ~sggg~~I~rVEVS~DgG~tW~~A~ 396 (466)
T 1sox_A 372 WSGGGREVVRVDVSLDGGRTWKVAR 396 (466)
T ss_dssp ECSTTCCEEEEEEESBTTSSCEECE
T ss_pred EcCCCCCEEEEEEEcCCCCcceEee
Confidence 33333369999999887 6998654
No 25
>2kt7_A Putative peptidoglycan bound protein (LPXTG motif); immunoglobulin fold, all-beta, peptidoglycan binding protein, structural genomics; NMR {Listeria monocytogenes}
Probab=27.78 E-value=75 Score=23.64 Aligned_cols=30 Identities=10% Similarity=0.263 Sum_probs=25.3
Q ss_pred CcceEEEEEecCCcEEEEccccCCCCCCCcEEecC
Q 025193 220 GQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGS 254 (256)
Q Consensus 220 g~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~~ 254 (256)
+.++.|+..|.+|+.|....++. |..|++.
T Consensus 5 ~~~VtV~YvDe~Gn~Ia~~~~lt-----G~~Y~t~ 34 (102)
T 2kt7_A 5 NFTVKVEYVDADGAEIAPSDTLT-----DYHYVST 34 (102)
T ss_dssp TCCEEEEEEETTSSEEEEEEEEC-----SSEEECC
T ss_pred CCEEEEEEEcCCCCCCCCCEeec-----CCccccc
Confidence 35899999999999998888777 6888875
No 26
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=26.94 E-value=31 Score=25.39 Aligned_cols=27 Identities=26% Similarity=0.412 Sum_probs=21.4
Q ss_pred hhcCCeeeEEEEEeecc---cCCceeEEEc
Q 025193 144 QYRAGIVPVLFRRVPCV---KKGGIRFTIN 170 (256)
Q Consensus 144 ~~~~G~v~i~wr~V~C~---~~gni~~~v~ 170 (256)
.+..|.+.|+||-|+=+ ..|.+.|.|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 45689999999999976 2467888775
No 27
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=26.06 E-value=33 Score=25.37 Aligned_cols=27 Identities=30% Similarity=0.383 Sum_probs=21.4
Q ss_pred hhcCCeeeEEEEEeecc---cCCceeEEEc
Q 025193 144 QYRAGIVPVLFRRVPCV---KKGGIRFTIN 170 (256)
Q Consensus 144 ~~~~G~v~i~wr~V~C~---~~gni~~~v~ 170 (256)
.+..|.+.|+||-|+=+ ..|.+.|.|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 45689999999999976 2467888775
No 28
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=23.77 E-value=66 Score=25.23 Aligned_cols=28 Identities=18% Similarity=0.515 Sum_probs=20.2
Q ss_pred ceEEEEEecCCc-EEEEccccCCCCCCCc
Q 025193 222 SLSFKVTTSDGR-TITSYNVVPANWKFGQ 249 (256)
Q Consensus 222 p~~vRvTs~~G~-~v~~~~vipa~w~~G~ 249 (256)
.++|+|||.... .|.++.++|..|+-|.
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGq 78 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQ 78 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTS
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCC
Confidence 578888885443 3556789999888775
No 29
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=20.23 E-value=96 Score=24.26 Aligned_cols=28 Identities=29% Similarity=0.438 Sum_probs=20.8
Q ss_pred ceEEEEEecCCc--EEEEccccCCCCCCCc
Q 025193 222 SLSFKVTTSDGR--TITSYNVVPANWKFGQ 249 (256)
Q Consensus 222 p~~vRvTs~~G~--~v~~~~vipa~w~~G~ 249 (256)
.++|+|||..+. .|+++.++|+.|+-|.
T Consensus 54 ~v~F~vtD~~~~~v~V~Y~GilPDlFrEGq 83 (136)
T 1j6q_A 54 HVQFAVHDSLGGEILVTYDDLLPDLFREGQ 83 (136)
T ss_dssp CEEEEEECTTCCCEEEEECSCCTTSCCSSS
T ss_pred EEEEEEEcCCCCEEEEEECCCCCccccCCC
Confidence 588899983343 4666789999998875
Done!