Query 025197
Match_columns 256
No_of_seqs 187 out of 1473
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 03:33:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025197.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025197hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 1.3E-53 2.8E-58 363.2 21.7 222 12-241 3-228 (238)
2 PLN00027 aquaporin TIP; Provis 100.0 9.3E-52 2E-56 358.3 27.8 252 1-256 1-252 (252)
3 PLN00166 aquaporin TIP2; Provi 100.0 1.6E-49 3.4E-54 343.3 27.2 229 13-241 11-239 (250)
4 PLN00184 aquaporin NIP1; Provi 100.0 1.6E-49 3.4E-54 349.7 26.1 223 15-244 49-278 (296)
5 KOG0224 Aquaporin (major intri 100.0 1.7E-50 3.7E-55 346.6 12.2 229 13-246 25-282 (316)
6 PF00230 MIP: Major intrinsic 100.0 1.6E-48 3.5E-53 334.3 22.7 221 13-234 1-227 (227)
7 PLN00026 aquaporin NIP; Provi 100.0 2.8E-48 6E-53 341.1 24.7 219 16-242 67-285 (298)
8 PLN00167 aquaporin TIP5; Provi 100.0 7.3E-48 1.6E-52 333.8 26.1 231 11-242 13-243 (256)
9 PLN00182 putative aquaporin NI 100.0 1.4E-47 3.1E-52 335.3 27.2 217 17-240 39-255 (283)
10 PTZ00016 aquaglyceroporin; Pro 100.0 3.6E-47 7.7E-52 335.6 24.2 219 17-241 47-292 (294)
11 PRK05420 aquaporin Z; Provisio 100.0 1.1E-46 2.4E-51 322.7 24.8 215 20-241 2-230 (231)
12 COG0580 GlpF Glycerol uptake f 100.0 6.8E-47 1.5E-51 321.1 21.6 218 18-239 3-240 (241)
13 PLN00183 putative aquaporin NI 100.0 3E-45 6.6E-50 319.6 25.4 225 12-244 37-261 (274)
14 cd00333 MIP Major intrinsic pr 100.0 8.4E-43 1.8E-47 299.0 22.1 212 21-237 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 9.9E-42 2.2E-46 290.1 22.1 209 25-234 1-216 (216)
16 PLN00026 aquaporin NIP; Provi 99.7 1.8E-16 4E-21 139.8 10.5 106 136-241 65-174 (298)
17 PLN00184 aquaporin NIP1; Provi 99.7 3.5E-16 7.6E-21 138.3 11.2 104 138-241 50-157 (296)
18 PLN00183 putative aquaporin NI 99.6 4.5E-15 9.8E-20 130.0 10.6 103 138-240 41-147 (274)
19 PLN00166 aquaporin TIP2; Provi 99.6 8.3E-15 1.8E-19 127.0 10.4 102 139-240 15-125 (250)
20 PLN00167 aquaporin TIP5; Provi 99.6 1.2E-14 2.7E-19 126.3 11.4 104 138-241 18-130 (256)
21 cd00333 MIP Major intrinsic pr 99.6 7.7E-15 1.7E-19 125.9 9.3 100 16-123 126-227 (228)
22 PLN00182 putative aquaporin NI 99.6 1.8E-14 3.9E-19 126.7 10.9 103 138-240 38-144 (283)
23 PLN00027 aquaporin TIP; Provis 99.5 3.2E-14 6.9E-19 123.7 11.0 101 140-240 18-127 (252)
24 PRK05420 aquaporin Z; Provisio 99.5 4.1E-14 9E-19 121.4 10.6 99 142-240 2-105 (231)
25 PTZ00016 aquaglyceroporin; Pro 99.5 4.3E-14 9.4E-19 125.2 10.3 101 140-240 48-152 (294)
26 TIGR00861 MIP MIP family chann 99.5 6.7E-14 1.5E-18 119.1 7.9 96 17-120 119-215 (216)
27 KOG0223 Aquaporin (major intri 99.4 2.7E-12 5.8E-17 109.9 10.6 104 138-241 7-114 (238)
28 COG0580 GlpF Glycerol uptake f 99.4 1.6E-12 3.4E-17 111.1 8.7 103 140-242 3-112 (241)
29 KOG0224 Aquaporin (major intri 99.4 1.2E-12 2.5E-17 113.5 6.8 102 140-241 30-136 (316)
30 PF00230 MIP: Major intrinsic 99.3 5.1E-12 1.1E-16 108.2 7.1 103 139-241 5-117 (227)
31 COG2116 FocA Formate/nitrite f 90.5 12 0.00025 32.9 20.2 177 57-242 63-261 (265)
32 PRK11562 nitrite transporter N 90.0 13 0.00028 32.8 15.5 173 59-242 59-253 (268)
33 PRK09713 focB putative formate 84.9 27 0.00059 30.9 16.4 99 59-161 68-180 (282)
34 PF01226 Form_Nir_trans: Forma 82.9 13 0.00028 32.3 9.6 102 58-161 57-170 (250)
35 PRK10805 formate transporter; 82.6 35 0.00075 30.3 16.7 99 59-161 69-181 (285)
36 PF04632 FUSC: Fusaric acid re 48.6 2.7E+02 0.0059 27.2 15.1 130 78-241 361-493 (650)
37 PF03033 Glyco_transf_28: Glyc 41.8 8.7 0.00019 29.2 0.0 20 78-97 6-25 (139)
38 PRK12446 undecaprenyldiphospho 30.6 13 0.00027 33.9 -0.8 22 75-96 6-27 (352)
39 PF09512 ThiW: Thiamine-precur 28.1 3E+02 0.0065 22.1 6.7 26 100-125 123-148 (150)
40 COG3301 NrfD Formate-dependent 26.0 4.8E+02 0.01 23.3 10.9 47 194-242 223-272 (305)
41 TIGR02587 putative integral me 24.4 5E+02 0.011 23.0 8.1 58 98-155 97-154 (271)
42 KOG3030 Lipid phosphate phosph 23.1 3.1E+02 0.0066 24.8 6.6 48 195-242 210-266 (317)
43 PRK11375 allantoin permease; P 21.3 7.2E+02 0.016 23.7 9.8 24 218-241 449-472 (484)
44 TIGR00790 fnt formate/nitrite 21.2 5.3E+02 0.011 22.0 18.7 101 58-161 43-157 (239)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-53 Score=363.20 Aligned_cols=222 Identities=54% Similarity=0.858 Sum_probs=204.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHH
Q 025197 12 DEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFG 91 (256)
Q Consensus 12 ~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 91 (256)
++..+.+.+|++++||++|++++|++|++.+...+ ...+.+.+.+++.+|+.+++.+++++++||||+|||||++
T Consensus 3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~-----~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a 77 (238)
T KOG0223|consen 3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK-----YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLA 77 (238)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHH
Confidence 45667999999999999999999999999875433 2235678899999999999999999999999999999999
Q ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 025197 92 ALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGM----RPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPK 167 (256)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 167 (256)
+++.|++++.++..|+.+|++|+++|+++++.+.+.. ......++++.+.+|+++.|++.||+|+++++.+++|+|
T Consensus 78 ~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~ 157 (238)
T KOG0223|consen 78 FAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPR 157 (238)
T ss_pred HHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCC
Confidence 9999999999999999999999999999999998763 234456778899999999999999999999999888888
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 168 RGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
++ .+.|+.||+++...+++.+++||++|||||+|||++..+.|+++|+||++|++|+++++++|++++.++
T Consensus 158 ~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 158 RS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred Cc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 75 579999999999999999999999999999999999999999999999999999999999999999988
No 2
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=9.3e-52 Score=358.28 Aligned_cols=252 Identities=63% Similarity=1.128 Sum_probs=212.5
Q ss_pred CCccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCC
Q 025197 1 MPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTS 80 (256)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iS 80 (256)
|+.|++.....+|...++.+|++++||+||++|+|.++++.+......++......+++.+++++|+++.+.+++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iS 80 (252)
T PLN00027 1 MPIRRIAIGTPGEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANIS 80 (252)
T ss_pred CCcccccCCchHhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccC
Confidence 66665544444455568889999999999999999999887543222211111234677889999999999999999999
Q ss_pred CcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHH
Q 025197 81 GGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVY 160 (256)
Q Consensus 81 Gah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~ 160 (256)
|+|+|||+|+++++.|+++|.+.+.|+++|++|+++|+.+.+.+.++.....+.+.++.+.+++++.|+++|++|+++++
T Consensus 81 Gah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~ 160 (252)
T PLN00027 81 GGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVY 160 (252)
T ss_pred ccccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888766544556667788999999999999999999998
Q ss_pred HhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 161 ATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
.+..|+|+...+.+.|+.+|+.+...+++++++||+++||||||||+++.++|+++|+||++|++|+++++++|++++.+
T Consensus 161 ~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 161 ATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HhccccccCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 86566665434457899999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCC
Q 025197 241 TEPPIHTHQPLAPEDY 256 (256)
Q Consensus 241 ~~~~~~~~~~~~~~~~ 256 (256)
++ ++++.++.||
T Consensus 241 ~~----~~~~~~~~~~ 252 (252)
T PLN00027 241 ST----THEQLPTTDY 252 (252)
T ss_pred Cc----cccccCCCCC
Confidence 54 5666666665
No 3
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.6e-49 Score=343.33 Aligned_cols=229 Identities=54% Similarity=0.958 Sum_probs=193.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHH
Q 025197 13 EAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGA 92 (256)
Q Consensus 13 ~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 92 (256)
|....+.+|++++||+||++++|.++++.....+..+.......+++.+++++|+.+++.+++++++||+|+|||+|+++
T Consensus 11 ~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~ 90 (250)
T PLN00166 11 DSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGL 90 (250)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHH
Confidence 44467888999999999999999999987542121111111123567789999999999999999999999999999999
Q ss_pred HHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 025197 93 LLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLG 172 (256)
Q Consensus 93 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~ 172 (256)
++.|+++|.+.+.|+++|++|+++|+.+.+.++++.........++.+..++++.|+++|++|+++++.+..|+|+...+
T Consensus 91 ~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~ 170 (250)
T PLN00166 91 AIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLG 170 (250)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 99999999999999999999999999999988765332222344567889999999999999999999865554443334
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 173 IVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 173 ~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
.+.|+.||+.+...++..+++||+++||||||||+++.++|+++|+||++|++|+++++++|+.++.+.
T Consensus 171 ~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~ 239 (250)
T PLN00166 171 TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239 (250)
T ss_pred cchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhccc
Confidence 578999999999999999999999999999999999999999999999999999999999999987544
No 4
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.6e-49 Score=349.71 Aligned_cols=223 Identities=30% Similarity=0.427 Sum_probs=189.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHH
Q 025197 15 AHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALL 94 (256)
Q Consensus 15 ~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 94 (256)
.+.+++|++++||+|||+|+|+++++..... ..+ ...+++.++++||+++++.+++++++||+|+|||||+++++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~--~~~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al 123 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNM--QND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFAS 123 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCC---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHH
Confidence 3456889999999999999999998875321 111 12356788999999999999999999999999999999999
Q ss_pred hCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc------c-ccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 025197 95 GGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRP------V-GFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPK 167 (256)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~------~-~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 167 (256)
.|+++|.+++.|+++|++|+++|+++++.+++.... . .+...+..+.+++++.|+++|++|+++++.+..|++
T Consensus 124 ~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~ 203 (296)
T PLN00184 124 CGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNR 203 (296)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCc
Confidence 999999999999999999999999999988853111 1 122334458899999999999999999998544433
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCCCC
Q 025197 168 RGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTEPP 244 (256)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~~~ 244 (256)
. .+.+.|+.||+++.+.+++.+++||++|||||||||+++.+.|+++|+||++|++|+++++++|+++...++|.
T Consensus 204 ~--~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~ 278 (296)
T PLN00184 204 A--IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPL 278 (296)
T ss_pred C--CCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcc
Confidence 2 33468999999999999999999999999999999999999999999999999999999999999999877533
No 5
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-50 Score=346.55 Aligned_cols=229 Identities=28% Similarity=0.385 Sum_probs=197.8
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHH
Q 025197 13 EAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGA 92 (256)
Q Consensus 13 ~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 92 (256)
...++++.|++++||+||++|+++++++++- ..+++. ...+++.+.++||+++++.+++.+++||||+|||||+++
T Consensus 25 ~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q-~vls~g---~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~ 100 (316)
T KOG0224|consen 25 LHIRNELLREFLAEFLGTFVLVVFGLGSVAQ-AVLSGG---TGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAM 100 (316)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhccceeEE-EEeccC---CCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHH
Confidence 3446889999999999999999999998853 222222 235677889999999999999999999999999999999
Q ss_pred HHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--------Ccccc--ccCCCchhhHHHHHHHHHHHH
Q 025197 93 LLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNG--------M--------RPVGF--YVASGVGEGHGLVLEIVMTFG 154 (256)
Q Consensus 93 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~--------~--------~~~~~--~~~~~~~~~~~~~~E~~~T~~ 154 (256)
++.||++|+|.++|+++|++||++|++.+|.++.+ . +...| .|+|+++.+++|+.|+++|.+
T Consensus 101 ~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~ 180 (316)
T KOG0224|consen 101 CILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAM 180 (316)
T ss_pred HHhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999987731 1 11223 467889999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC----C-------CccchhHhhhh
Q 025197 155 LVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW----R-------WRNHWIYWVGP 223 (256)
Q Consensus 155 l~~~i~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~----~-------~~~~wvy~vap 223 (256)
|+..+++ .+|+||.-+..+.|+.+|+.+.++..+.+.++|..+|||||||||++.. . -.+.|+.|++|
T Consensus 181 L~~~l~a-I~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgP 259 (316)
T KOG0224|consen 181 LVLCLFA-ITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGP 259 (316)
T ss_pred HHhheeE-EecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhh
Confidence 9999988 5899996667889999999999999999999999999999999999842 1 14678999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCC
Q 025197 224 FLGAGLAALIYEYIVIPTEPPIH 246 (256)
Q Consensus 224 ~~Ga~~a~~~~~~l~~~~~~~~~ 246 (256)
++|+++++++|++++..+.++++
T Consensus 260 l~Gai~G~~iY~~~Ig~h~~~~~ 282 (316)
T KOG0224|consen 260 LIGAILGGWIYDFFIGFHIPREP 282 (316)
T ss_pred hhhhhhhhhhheeeeeccCCCCC
Confidence 99999999999999998886444
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.6e-48 Score=334.28 Aligned_cols=221 Identities=45% Similarity=0.679 Sum_probs=189.3
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCC-CchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHH
Q 025197 13 EAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTS-PSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFG 91 (256)
Q Consensus 13 ~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 91 (256)
|.++.+++|++++||+||++++|+++++.+...+...+...+ ..++..+++++|+++++.++.++++||+|+||+||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 456789999999999999999999999776443333221111 2467889999999999999999999999999999999
Q ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC--Ccc--ccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 025197 92 ALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGM--RPV--GFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPK 167 (256)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~--~~~--~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 167 (256)
.++.|+++|++.+.|+++|++|+++|+.+++.++++. ... ...+.++.+..++++.|+++|++|+++++.+ .|++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~-~~~~ 159 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAV-ADDK 159 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHH-TSTT
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhh-cccc
Confidence 9999999999999999999999999999999998762 222 2346678899999999999999999999985 4544
Q ss_pred CCCC-CChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHH
Q 025197 168 RGSL-GIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIY 234 (256)
Q Consensus 168 ~~~~-~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~ 234 (256)
++.. +.+.|+.||+++.+..+..++.||+++||||+|+++++.+.|+++|+||++|++|+++|+++|
T Consensus 160 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 160 RKFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 4333 557899999999999999999999999999999999999999999999999999999999987
No 7
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=2.8e-48 Score=341.15 Aligned_cols=219 Identities=32% Similarity=0.463 Sum_probs=187.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHh
Q 025197 16 HPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLG 95 (256)
Q Consensus 16 ~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 95 (256)
..+++|++++||+|||+|+|+++++.+...+ .. ...+++.+++++|+++++.+++++++||||+|||||+++++.
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~-~~----~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~ 141 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQK-YD----GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAAL 141 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccc-cC----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHh
Confidence 3467899999999999999999976543211 11 113566788999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChH
Q 025197 96 GRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVG 175 (256)
Q Consensus 96 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~~~ 175 (256)
++++|++.+.||++|++|+++|+++++.++++...... ..++.+.+++++.|+++|++|+++++.+..|+++ .+...
T Consensus 142 g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~-t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~--~~~~~ 218 (298)
T PLN00026 142 RHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSGGV-TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELA 218 (298)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCce-eeecccHHHHHHHHHHHHHHHHHhheeeecCCCC--cCCcc
Confidence 99999999999999999999999999998865322211 2346789999999999999999999875445433 23457
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 176 PLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 176 ~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
++.+|+++.+.+++.+++||+++||||||+|++..++|+++|+||++|++|+++++++|+++..+++
T Consensus 219 ~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~ 285 (298)
T PLN00026 219 GIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREE 285 (298)
T ss_pred chHHHHHHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 8999999999999999999999999999999999999999999999999999999999999977665
No 8
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=7.3e-48 Score=333.79 Aligned_cols=231 Identities=48% Similarity=0.848 Sum_probs=194.7
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHH
Q 025197 11 ADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTF 90 (256)
Q Consensus 11 ~~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTl 90 (256)
.++...++.+|++++||+||++++|+++++........++....+.+++.+++++|+++++.+++++++||+|+|||||+
T Consensus 13 ~~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl 92 (256)
T PLN00167 13 FQQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTF 92 (256)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHH
Confidence 34445788999999999999999999998875322111111112346788999999999999999999999999999999
Q ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 025197 91 GALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGS 170 (256)
Q Consensus 91 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~ 170 (256)
+.++.|+++|++++.|+++|++|+++|+.+++.++++...+.....++.+.+++++.|+++|++|+++++. ..|+++..
T Consensus 93 ~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~-~~~~~~~~ 171 (256)
T PLN00167 93 GMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYA-AGDPRRGL 171 (256)
T ss_pred HHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHH-hccccccC
Confidence 99999999999999999999999999999998887643222233334567789999999999999999987 46665543
Q ss_pred CCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 171 LGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 171 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
.....|+.+|+.+....++.+++||+++||||||||+++.+.|+++|+||++|++|+++++++|++++.+++
T Consensus 172 ~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~ 243 (256)
T PLN00167 172 LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQ 243 (256)
T ss_pred CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence 445689999999999999999999999999999999999989999999999999999999999999997653
No 9
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.4e-47 Score=335.34 Aligned_cols=217 Identities=30% Similarity=0.505 Sum_probs=187.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhC
Q 025197 17 PDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGG 96 (256)
Q Consensus 17 ~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 96 (256)
..++|++++||+|||+|+|+++++.... ...+. ..+...+++++|+++++.+++++++||+|+|||||+++++.|
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~-~~~~~----~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~ 113 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVN-VLYGG----TITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFR 113 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCC----CcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHc
Confidence 3677999999999999999999887532 11111 135667889999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChHH
Q 025197 97 RISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGP 176 (256)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~~~~ 176 (256)
+++|.+++.|+++|++|+++|+++++.+++......+...++.+.+++++.|+++|++|+++++.+..++++ .+...+
T Consensus 114 ~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--~~~~~~ 191 (283)
T PLN00182 114 RFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA--VGELAG 191 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc--CCcchh
Confidence 999999999999999999999999999886433334445566788999999999999999999875444332 234579
Q ss_pred HHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 177 LAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 177 ~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
+.+|+++.+.+++.+++||+++||||+|+|+++.+.|+++|+||++|++|+++|+++|+++..+
T Consensus 192 l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~ 255 (283)
T PLN00182 192 IAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFT 255 (283)
T ss_pred HHHHHHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999998899999999999999999999999999854
No 10
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=3.6e-47 Score=335.57 Aligned_cols=219 Identities=29% Similarity=0.439 Sum_probs=186.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhC
Q 025197 17 PDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGG 96 (256)
Q Consensus 17 ~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 96 (256)
++++|++++||+||++++|+++++..... ..+ ...+.+.+++++|+++.+.+++++++||+|+|||||+++++.|
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~-~~~----~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g 121 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTH-TVG----NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFG 121 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccC----CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhc
Confidence 77889999999999999999998865321 111 1235667899999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C-------------ccccccCCCchhhHHHHHHHHHHHHHHHHH
Q 025197 97 RISVVRAIYYWIAQLLGAIVAALLLRFATNGM----R-------------PVGFYVASGVGEGHGLVLEIVMTFGLVYTV 159 (256)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~-------------~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i 159 (256)
+++|.+.+.|+++|++|+++|+++++.++++. + ...+.+.|+.+..++++.|+++|++|++++
T Consensus 122 ~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~i 201 (294)
T PTZ00016 122 KFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVI 201 (294)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887531 0 012344556788999999999999999999
Q ss_pred HHhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHcc------CCCc----cchhHhhhhhHHHHH
Q 025197 160 YATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG------WRWR----NHWIYWVGPFLGAGL 229 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~------~~~~----~~wvy~vap~~Ga~~ 229 (256)
+.+ .|+|+.......|+.||+.+.++.++.+++||+++||||||||+++. ..|+ ++|+||++|++|+++
T Consensus 202 la~-~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~ 280 (294)
T PTZ00016 202 LAI-TDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVL 280 (294)
T ss_pred HHh-ccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHH
Confidence 984 77666443446899999999999999999999999999999999985 2454 689999999999999
Q ss_pred HHHHHHHHhcCC
Q 025197 230 AALIYEYIVIPT 241 (256)
Q Consensus 230 a~~~~~~l~~~~ 241 (256)
|+++|++++.++
T Consensus 281 aally~~ll~~~ 292 (294)
T PTZ00016 281 GMFLYDKFIPPL 292 (294)
T ss_pred HHHHHHHHhCCC
Confidence 999999998765
No 11
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=1.1e-46 Score=322.67 Aligned_cols=215 Identities=32% Similarity=0.518 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhCCcc
Q 025197 20 MRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGGRIS 99 (256)
Q Consensus 20 ~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 99 (256)
+|++++||+||++++|+++++.....+..+ ...+++.+++++|+++++.+++++++||+|+|||||+++++.|+++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~----~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~ 77 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPE----LGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFP 77 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCC----CCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCC
Confidence 689999999999999999988643221111 1235677899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc---c--cc------c-cCCCchhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 025197 100 VVRAIYYWIAQLLGAIVAALLLRFATNGMRP---V--GF------Y-VASGVGEGHGLVLEIVMTFGLVYTVYATVIDPK 167 (256)
Q Consensus 100 ~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~---~--~~------~-~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 167 (256)
|++.+.|+++|++|+++|+.+++.++.+... . .+ . .+...+..++++.|+++|++|+++++.. .|+|
T Consensus 78 ~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~ 156 (231)
T PRK05420 78 AKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKR 156 (231)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 9999999999999999999999988754211 0 01 0 1123478899999999999999999984 6655
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCC--ccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 168 RGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRW--RNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~--~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
+. ....|+.+|+.+.+..++++++||+++||||||||+++.++| +++|+||++|++|+++++++|++++.++
T Consensus 157 ~~--~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 157 AP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred CC--CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 42 346899999999999999999999999999999999998766 5899999999999999999999997655
No 12
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-47 Score=321.12 Aligned_cols=218 Identities=34% Similarity=0.498 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhCC
Q 025197 18 DTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGGR 97 (256)
Q Consensus 18 ~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 97 (256)
+..|++++||+||++|++.+++++........ +....+++.++++||+++.+.+++++++||+|+|||||+++++.|+
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~--~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~ 80 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGS--KALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGR 80 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccc--cccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCC
Confidence 46788899999999999999999875432221 1234577789999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C------ccccccCCC-chhhHHHHHHHHHHHHHHHHHHHhhccC
Q 025197 98 ISVVRAIYYWIAQLLGAIVAALLLRFATNGM----R------PVGFYVASG-VGEGHGLVLEIVMTFGLVYTVYATVIDP 166 (256)
Q Consensus 98 ~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~------~~~~~~~~~-~~~~~~~~~E~~~T~~l~~~i~~~~~~~ 166 (256)
++|++++.||++|++||++|+.+++.++.+. + ...+++.|+ .+..++++.|+++|++|++.++.+..|+
T Consensus 81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~ 160 (241)
T COG0580 81 FPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDG 160 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999888531 1 123444444 3788999999999999999999964444
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC---------CCccchhHhhhhhHHHHHHHHHHHHH
Q 025197 167 KRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW---------RWRNHWIYWVGPFLGAGLAALIYEYI 237 (256)
Q Consensus 167 ~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~---------~~~~~wvy~vap~~Ga~~a~~~~~~l 237 (256)
+. ...+.|+.||+.+....++.++.||.++|||||+|||+... ++.|.|+||++|++|+++|+++|+.+
T Consensus 161 ~~--~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~ 238 (241)
T COG0580 161 NA--NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLL 238 (241)
T ss_pred cc--cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHH
Confidence 33 32489999999999999999999999999999999999542 23589999999999999999999988
Q ss_pred hc
Q 025197 238 VI 239 (256)
Q Consensus 238 ~~ 239 (256)
+.
T Consensus 239 ~~ 240 (241)
T COG0580 239 LG 240 (241)
T ss_pred cc
Confidence 65
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=3e-45 Score=319.61 Aligned_cols=225 Identities=29% Similarity=0.456 Sum_probs=190.3
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHH
Q 025197 12 DEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFG 91 (256)
Q Consensus 12 ~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 91 (256)
+...+.+.+|++++||++||+++|+++++..... ... ...+++..++.+|+++.+.+++++++||+|+|||+|++
T Consensus 37 ~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~-~~~----~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla 111 (274)
T PLN00183 37 PYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQ-LSG----GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIA 111 (274)
T ss_pred CCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccC----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHH
Confidence 3445677889999999999999999998764321 111 12356678899999999999999999999999999999
Q ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 025197 92 ALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSL 171 (256)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~ 171 (256)
+++.++++|.+++.|+++|++|+++|+.+++.+++... ..+...+..+.+++++.|+++|++|++.++.+ .++++ +.
T Consensus 112 ~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~-~~ 188 (274)
T PLN00183 112 FATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASL-TSQPQ-SL 188 (274)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhhee-ecccc-CC
Confidence 99999999999999999999999999999988886432 23334455677899999999999999999885 44332 22
Q ss_pred CChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCCCC
Q 025197 172 GIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTEPP 244 (256)
Q Consensus 172 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~~~ 244 (256)
+...++.+|+.+++.+++.+++||+++||||+|+|++.+.+|+++|+||++|++|+++++++|++++.+..+.
T Consensus 189 ~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~ 261 (274)
T PLN00183 189 GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPC 261 (274)
T ss_pred CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 2357899999999999999999999999999999999998999999999999999999999999999877543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=8.4e-43 Score=299.03 Aligned_cols=212 Identities=47% Similarity=0.774 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhCCcch
Q 025197 21 RAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGGRISV 100 (256)
Q Consensus 21 ~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 100 (256)
|++++||+||+++++.++++..... ..++ ...+++..++++|+++.+.+++++++||+|+|||+|++.++.|+++|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~-~~~~---~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~ 76 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVK-LAGG---ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPL 76 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhcc-ccCC---CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCH
Confidence 5789999999999999998875322 1110 12346778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC----Ccc------c--cccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025197 101 VRAIYYWIAQLLGAIVAALLLRFATNGM----RPV------G--FYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKR 168 (256)
Q Consensus 101 ~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~------~--~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~ 168 (256)
.+.+.|+++|++|+++|+.+.+.++++. +.. . ..+.++.+.+++++.|+++|++|++.++.+ .++++
T Consensus 77 ~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~-~~~~~ 155 (228)
T cd00333 77 IRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFAT-TDDPN 155 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHH-ccccc
Confidence 9999999999999999999998887531 111 1 124556789999999999999999999985 45444
Q ss_pred C-CCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCC---CccchhHhhhhhHHHHHHHHHHHHH
Q 025197 169 G-SLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWR---WRNHWIYWVGPFLGAGLAALIYEYI 237 (256)
Q Consensus 169 ~-~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~---~~~~wvy~vap~~Ga~~a~~~~~~l 237 (256)
. ......++.+|+.+.+.+++.+++||+++|||||+++++.++. |+++|+||++|++|+++|+++|+++
T Consensus 156 ~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 156 GPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 2 2334689999999999999999999999999999999999875 9999999999999999999999874
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=9.9e-42 Score=290.14 Aligned_cols=209 Identities=43% Similarity=0.678 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhCCcchHHHH
Q 025197 25 AEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGGRISVVRAI 104 (256)
Q Consensus 25 ~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 104 (256)
+||+||++++|+++++..............+.+...+++.+|+.+...+++++++||+|+|||+|++.++.++++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987642221100111112567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCc---c-ccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCC-CCChHHHHH
Q 025197 105 YYWIAQLLGAIVAALLLRFATNGMRP---V-GFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGS-LGIVGPLAI 179 (256)
Q Consensus 105 ~yi~aQ~~Ga~~g~~l~~~~~~~~~~---~-~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~-~~~~~~~~i 179 (256)
.|+++|++|+++|+.+.+.++++... . ...+.++.+.+++++.|+++|++|+++++.. .+++++. .+...++.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~-~~~~~~~~~~~~~~~~i 159 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFAT-TDPRNRVPRGGFAPLAI 159 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhee-ecCCCCCCCCccHHHHH
Confidence 99999999999999999988865311 1 1112345788999999999999999999884 5544432 223689999
Q ss_pred HHHHHHHHHhhcCCCCCccchhhhHHHHHccC--CCccchhHhhhhhHHHHHHHHHH
Q 025197 180 GFIVGANILVGGPFDGASMNPARAFGPALVGW--RWRNHWIYWVGPFLGAGLAALIY 234 (256)
Q Consensus 180 g~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~--~~~~~wvy~vap~~Ga~~a~~~~ 234 (256)
|+.+.+.++..+++||+++||||+|++++.++ +|+++|+||++|++|+++++++|
T Consensus 160 G~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 160 GLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999987 89999999999999999999875
No 16
>PLN00026 aquaporin NIP; Provisional
Probab=99.68 E-value=1.8e-16 Score=139.84 Aligned_cols=106 Identities=22% Similarity=0.252 Sum_probs=88.0
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHhhccCCC-CCCCCh--HHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-
Q 025197 136 ASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKR-GSLGIV--GPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW- 211 (256)
Q Consensus 136 ~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~-~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~- 211 (256)
.++.+.+|.++.|+++|++|+++++.....+++ ...... .++.+|+++++.+++.+++||+|+||||++++++.+.
T Consensus 65 ~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~ 144 (298)
T PLN00026 65 PPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHF 144 (298)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCC
Confidence 446678899999999999999999864333221 111122 3578999999999999999999999999999999876
Q ss_pred CCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 212 RWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 212 ~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
.|.+.|+||++|++|+++|+++++.++.+.
T Consensus 145 ~~~~~~~YiiaQilGAi~aa~~~~~~~~~~ 174 (298)
T PLN00026 145 PWKHVPAYIAAQVSASICASFALKGVFHPF 174 (298)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 799999999999999999999999998653
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.67 E-value=3.5e-16 Score=138.28 Aligned_cols=104 Identities=23% Similarity=0.252 Sum_probs=85.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhccCCC-CCCCChH--HHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CC
Q 025197 138 GVGEGHGLVLEIVMTFGLVYTVYATVIDPKR-GSLGIVG--PLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RW 213 (256)
Q Consensus 138 ~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~-~~~~~~~--~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 213 (256)
+.+.++.++.|+++|++|++++++.+..... .....+. ++.+|+++++.+++.+++||+|+||||++++++.+. .|
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence 4467899999999999999999875422111 1111233 455599999999999999999999999999999877 79
Q ss_pred ccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 214 RNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 214 ~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
.+.|+||++|++|+++|+++++.++...
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~~ 157 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGLD 157 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999998644
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.60 E-value=4.5e-15 Score=129.96 Aligned_cols=103 Identities=19% Similarity=0.233 Sum_probs=86.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC-CCh--HHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CC
Q 025197 138 GVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSL-GIV--GPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RW 213 (256)
Q Consensus 138 ~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~-~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 213 (256)
+.+.++.++.|+++|++++++++.+..+++.... ..+ .++.+|+++.+.+++.+++||+|+||||++++++.+. .|
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~ 120 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPW 120 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCH
Confidence 4577899999999999999999885443322111 122 4668899999999999999999999999999999876 79
Q ss_pred ccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 214 RNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 214 ~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
.+.|+||++|++|+++|+.+++.++..
T Consensus 121 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 121 SKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998865
No 19
>PLN00166 aquaporin TIP2; Provisional
Probab=99.58 E-value=8.3e-15 Score=127.01 Aligned_cols=102 Identities=21% Similarity=0.370 Sum_probs=85.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcc--CCC--C---CCCC-hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHcc
Q 025197 139 VGEGHGLVLEIVMTFGLVYTVYATVID--PKR--G---SLGI-VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 210 (256)
Q Consensus 139 ~~~~~~~~~E~~~T~~l~~~i~~~~~~--~~~--~---~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~ 210 (256)
.+.+++++.|+++|++|+++.+.+..+ +.. + ..+. ..++.+|+.+++.+++.+++||+|+||||++++.+.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 567889999999999999999886433 111 1 1111 2567799999999999999999999999999999975
Q ss_pred C-CCccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 211 W-RWRNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 211 ~-~~~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
. .|.+.|+||++|++|+++|+.+++.++..
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5 68899999999999999999999998754
No 20
>PLN00167 aquaporin TIP5; Provisional
Probab=99.58 E-value=1.2e-14 Score=126.28 Aligned_cols=104 Identities=19% Similarity=0.404 Sum_probs=87.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhccCCC-----CC--CC-ChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHc
Q 025197 138 GVGEGHGLVLEIVMTFGLVYTVYATVIDPKR-----GS--LG-IVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 209 (256)
Q Consensus 138 ~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~-----~~--~~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~ 209 (256)
.-+.++.++.|+++|++|+++.+++..+.+. +. .+ ...++.+|+++.+.+++.+++||+|+|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 3467789999999999999999886443221 11 11 2468999999999999999999999999999999998
Q ss_pred cC-CCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 210 GW-RWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 210 ~~-~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
+. .|++.|+||++|++|+++|+.+++.++..+
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 130 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVGQ 130 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccc
Confidence 65 699999999999999999999999887653
No 21
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.58 E-value=7.7e-15 Score=125.89 Aligned_cols=100 Identities=25% Similarity=0.305 Sum_probs=83.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHh
Q 025197 16 HPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLG 95 (256)
Q Consensus 16 ~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 95 (256)
+.+.+|.++.|+++|+++++.++...... + . .......++.+|+.+...++..+++||+|+|||+|++..+.
T Consensus 126 ~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~-----~-~--~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~ 197 (228)
T cd00333 126 GVSNGNAFFVEFIGTFILVLVVFATTDDP-----N-G--PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALF 197 (228)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcccc-----c-c--CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHH
Confidence 45788999999999999999988665211 1 0 01222457888999999999999999999999999999999
Q ss_pred CCc--chHHHHHHHHHHHHHHHHHHHHHHH
Q 025197 96 GRI--SVVRAIYYWIAQLLGAIVAALLLRF 123 (256)
Q Consensus 96 g~~--~~~~~~~yi~aQ~~Ga~~g~~l~~~ 123 (256)
++. +|.+.|+||++|++|+++|+++.+.
T Consensus 198 ~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 198 TGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred hccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 988 7999999999999999999988653
No 22
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.57 E-value=1.8e-14 Score=126.70 Aligned_cols=103 Identities=21% Similarity=0.204 Sum_probs=85.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCh--HHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CC
Q 025197 138 GVGEGHGLVLEIVMTFGLVYTVYATVIDPKRG-SLGIV--GPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RW 213 (256)
Q Consensus 138 ~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~-~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 213 (256)
..+.++.++.|+++|++|++..++++...+.. ..... ..+.+|+.+.+.+++.+++||+|+|||+++++++.+. .|
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~ 117 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW 117 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence 34567899999999999999988854432211 11122 3457899999999999999999999999999999987 79
Q ss_pred ccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 214 RNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 214 ~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
.+.|+||++|++|+++|+++.+.++..
T Consensus 118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~ 144 (283)
T PLN00182 118 YQVPLYIGAQLTGSLLASLTLRLMFNV 144 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998853
No 23
>PLN00027 aquaporin TIP; Provisional
Probab=99.55 E-value=3.2e-14 Score=123.66 Aligned_cols=101 Identities=21% Similarity=0.326 Sum_probs=83.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcc------CCCCCCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVID------PKRGSLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW 211 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~------~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~ 211 (256)
..++.++.|+++|++|+++.++.... +++..... ..++.+|+.+.+.+++.+++||+|+||||++++.+.+.
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 56789999999999999998875321 11111112 36889999999999999999999999999999998765
Q ss_pred -CCccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 212 -RWRNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 212 -~~~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
.|.+.|+||++|++|+++|+.+++.+...
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 127 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTGG 127 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 68899999999999999999999887644
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.54 E-value=4.1e-14 Score=121.43 Aligned_cols=99 Identities=23% Similarity=0.213 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC-CC-C-CCCh-HHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCccc
Q 025197 142 GHGLVLEIVMTFGLVYTVYATVIDPK-RG-S-LGIV-GPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRNH 216 (256)
Q Consensus 142 ~~~~~~E~~~T~~l~~~i~~~~~~~~-~~-~-~~~~-~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~~ 216 (256)
.|.++.|+++|++|+++.+......+ .+ . .+.. .++.+|+++.+.+++.+++||+|+|||+++++.+.+. .|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 57899999999999998877432211 11 1 1222 3788999999999999999999999999999999875 79999
Q ss_pred hhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 217 WIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 217 wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
|.||++|++|+++|+.+.+.++..
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999887777754
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.53 E-value=4.3e-14 Score=125.19 Aligned_cols=101 Identities=25% Similarity=0.310 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccCCC-C-CCC-ChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCcc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVIDPKR-G-SLG-IVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRN 215 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~~~~-~-~~~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~ 215 (256)
+..+.++.|+++|++|+++.+++..+... + ..+ ...++.+|+++.+.+++.+++||+|+|||+++++++.+. .|.+
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 56689999999999999988875433211 1 111 125678899999999999999999999999999999887 7999
Q ss_pred chhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 216 HWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 216 ~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
.|+||++|++|+++|+++.+.++.+
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998888765
No 26
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.49 E-value=6.7e-14 Score=119.12 Aligned_cols=96 Identities=26% Similarity=0.306 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhC
Q 025197 17 PDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGG 96 (256)
Q Consensus 17 ~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 96 (256)
.+.++.++.|+++|+++++..+...... + .. . .....++.+|+.+...++..+++||+|+|||++++.++.+
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~-----~-~~-~-~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~ 190 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPR-----N-RV-P-RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFA 190 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCC-----C-CC-C-CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHh
Confidence 5789999999999999999988654321 0 00 0 1114678899999999999999999999999999999975
Q ss_pred -CcchHHHHHHHHHHHHHHHHHHHH
Q 025197 97 -RISVVRAIYYWIAQLLGAIVAALL 120 (256)
Q Consensus 97 -~~~~~~~~~yi~aQ~~Ga~~g~~l 120 (256)
+.+|.+.|+|+++|++|+++++.+
T Consensus 191 ~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 191 GLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ccccccceeHHHHHHHHHHHHHHHh
Confidence 578999999999999999999875
No 27
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.39 E-value=2.7e-12 Score=109.90 Aligned_cols=104 Identities=25% Similarity=0.268 Sum_probs=87.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhccCCC-CCCC--ChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CC
Q 025197 138 GVGEGHGLVLEIVMTFGLVYTVYATVIDPKR-GSLG--IVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RW 213 (256)
Q Consensus 138 ~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~-~~~~--~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 213 (256)
..+.+|+++.||++|++++++.+.++...++ .... ....+..|+++++.+++.+++||+|+|||.+++..+.+. .+
T Consensus 7 ~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl 86 (238)
T KOG0223|consen 7 SVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISL 86 (238)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcH
Confidence 4578899999999999999998886544332 1121 124677899999999999999999999999999999876 68
Q ss_pred ccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 214 RNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 214 ~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
.+...||++|++|+++|+.+.+.+.+.+
T Consensus 87 ~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~ 114 (238)
T KOG0223|consen 87 FRAVAYIVAQLLGAIAGAALLKVVTPGQ 114 (238)
T ss_pred HHhHHHHHHHHHHHHHHHHHHheecCcc
Confidence 8899999999999999999999998874
No 28
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.38 E-value=1.6e-12 Score=111.13 Aligned_cols=103 Identities=27% Similarity=0.245 Sum_probs=84.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcc---CC--CCCCCC-hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-C
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVID---PK--RGSLGI-VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-R 212 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~---~~--~~~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~ 212 (256)
+..+.++.|+++|++|++...+.... ++ +...+. ...+..|+.+.+.+++.+++||+|+|||++++.++.++ .
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 34566799999999999977654322 12 111122 25678899999999999999999999999999999876 7
Q ss_pred CccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 213 WRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 213 ~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
|++...||++|++|+++|+.+...++.++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~ 112 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKI 112 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999988865
No 29
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.2e-12 Score=113.54 Aligned_cols=102 Identities=25% Similarity=0.348 Sum_probs=82.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccC--CCCCCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVIDP--KRGSLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWR 214 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~~--~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~ 214 (256)
...|.+++||++|++|++..+++.... .+.+.+. ...+..|++++..+++.+.+||+|+|||++|+..+.++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 578899999999999998777643221 1112221 23577899999999999999999999999999999987 799
Q ss_pred cchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 215 NHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 215 ~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
++.+|.++|++||++|+.....+|.+.
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~ 136 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDA 136 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988877777654
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.30 E-value=5.1e-12 Score=108.24 Aligned_cols=103 Identities=30% Similarity=0.392 Sum_probs=81.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhc--cCCCCC----CC-C--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHc
Q 025197 139 VGEGHGLVLEIVMTFGLVYTVYATVI--DPKRGS----LG-I--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 209 (256)
Q Consensus 139 ~~~~~~~~~E~~~T~~l~~~i~~~~~--~~~~~~----~~-~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~ 209 (256)
.+.+|.++.|+++|+++++....... ++...+ .. . ...+..|+.+.+.+++.+++||+|+|||.+++..+.
T Consensus 5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~ 84 (227)
T PF00230_consen 5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT 84 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence 46789999999999999987776422 222111 11 1 234556888889999999999999999999999998
Q ss_pred cC-CCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 210 GW-RWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 210 ~~-~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
+. .|.+...|+++|++|+++|+.+.+.++.+.
T Consensus 85 g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~ 117 (227)
T PF00230_consen 85 GRISWKKAIVYIIAQFLGAFLGALLVYALYPDS 117 (227)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred eeecccceeeEEeeccccccccccchhhcccCc
Confidence 76 688999999999999999999998888773
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=90.45 E-value=12 Score=32.94 Aligned_cols=177 Identities=18% Similarity=0.234 Sum_probs=94.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHh--CC---CCc
Q 025197 57 DLVVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFAT--NG---MRP 130 (256)
Q Consensus 57 ~~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~--~~---~~~ 130 (256)
..+..++.+++++.+.+++.+.. +| |--....-...++++|++.+--|+-=.+|=++|++++.+++ .+ ...
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~ 139 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTAN 139 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 45566777777777777655443 22 32233334568899999988888777777777777665554 11 111
Q ss_pred cccc--------cCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhh
Q 025197 131 VGFY--------VASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPAR 202 (256)
Q Consensus 131 ~~~~--------~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~ 202 (256)
+.+. -.-+.+..+.|.--+++..+..+++... ...|.. .+.. +++...+..+....+.=...|-..
T Consensus 140 ~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~-~~~k~~-~~K~----~~m~~pv~~Fv~~GfeH~VANm~~ 213 (265)
T COG2116 140 GQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS-YSAKDG-AAKI----FAIILPVMLFVASGFEHSVANMFM 213 (265)
T ss_pred chhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH-hcccch-hhHH----HHHHHHHHHHHHcCCceeeehHHH
Confidence 1110 0123456777777777888877777763 222221 1111 222222233333333334445333
Q ss_pred hHHHHHccC--CCcc-chh----HhhhhhHH-HHHHHHHHHHHhcCCC
Q 025197 203 AFGPALVGW--RWRN-HWI----YWVGPFLG-AGLAALIYEYIVIPTE 242 (256)
Q Consensus 203 ~lg~~~~~~--~~~~-~wv----y~vap~~G-a~~a~~~~~~l~~~~~ 242 (256)
--..+...+ +|.. .|- -.+|-++| +++-++.|.+++.+++
T Consensus 214 i~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~ 261 (265)
T COG2116 214 IPWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQN 261 (265)
T ss_pred HHHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhccccc
Confidence 222233222 4544 222 23455555 5667888888888764
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=90.00 E-value=13 Score=32.75 Aligned_cols=173 Identities=14% Similarity=0.136 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhC---C-CCc--c
Q 025197 59 VVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATN---G-MRP--V 131 (256)
Q Consensus 59 ~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~---~-~~~--~ 131 (256)
+..++.+++++.+.+...+.. +| |=.......+.||.+|++.+--|.-=++|=++|+++..++.. + ... .
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~ 135 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 334556666666666544332 33 333333456788899998887777777777777666544431 1 110 0
Q ss_pred cc--c---cCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHH
Q 025197 132 GF--Y---VASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGP 206 (256)
Q Consensus 132 ~~--~---~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~ 206 (256)
.. . -.-+.+..+.|+-=++|.++..+.+... ...+ ..+....+.+. +++.+..+- .=...|-- -+..
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~-~~~~--~~gKi~~i~~p--I~~Fv~~GF--EH~IANm~-~~~l 207 (268)
T PRK11562 136 SIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMA-IRTE--GAAKFIAIWWC--LLAFIASGY--EHSVANMT-LFAL 207 (268)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH-Hhcc--ccchhHHHHHH--HHHHHHcCC--cchhHhHH-HHHH
Confidence 00 0 0112356677777777777777777653 2222 22222332222 222222222 21223421 2222
Q ss_pred HHccC-----CC----ccchhHhhhhhHHH-HHHHHHHHHHhcCCC
Q 025197 207 ALVGW-----RW----RNHWIYWVGPFLGA-GLAALIYEYIVIPTE 242 (256)
Q Consensus 207 ~~~~~-----~~----~~~wvy~vap~~Ga-~~a~~~~~~l~~~~~ 242 (256)
.+... .| ++.-.=.+|-++|+ ++-++.|.+++.++.
T Consensus 208 ~~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~ 253 (268)
T PRK11562 208 SWFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKAN 253 (268)
T ss_pred HHHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 22221 11 12223357888887 566778888876653
No 33
>PRK09713 focB putative formate transporter; Provisional
Probab=84.91 E-value=27 Score=30.94 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHH----HHHHHHHHHHHHHHHHhCCC-Cccc
Q 025197 59 VVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWI----AQLLGAIVAALLLRFATNGM-RPVG 132 (256)
Q Consensus 59 ~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~----aQ~~Ga~~g~~l~~~~~~~~-~~~~ 132 (256)
+..++.+.+++.+.+...+.. +|-. ...++ ...++.+|++.+-.|. +-++|+++-+.+.+...... +...
T Consensus 68 ll~g~~F~vGLilIv~~g~ELfTgN~---~~~~~-~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~ 143 (282)
T PRK09713 68 LVGGLCFTLGFILLAVCGTSLFTSSV---MTVMA-KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAM 143 (282)
T ss_pred HHHHHHHHHHHHHHHHhCccccHHHH---HHHHH-HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchh
Confidence 444666777776666654443 3322 22233 5688889888875444 45555555544433211100 0010
Q ss_pred c-----c---cCCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 133 F-----Y---VASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 133 ~-----~---~~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
. . -.-+.+.++.|+--++|.++..+.++.
T Consensus 144 ~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~ 180 (282)
T PRK09713 144 WGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWM 180 (282)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 112346788888888888888887775
No 34
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=82.93 E-value=13 Score=32.27 Aligned_cols=102 Identities=20% Similarity=0.109 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC---C-cccc
Q 025197 58 LVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGM---R-PVGF 133 (256)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~---~-~~~~ 133 (256)
-+..++.+.+++...+...+..- --|-......++.||.+|++.+--|.-=.+|=++|+.+...+.... . .+..
T Consensus 57 ~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~ 134 (250)
T PF01226_consen 57 KLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAM 134 (250)
T ss_dssp HHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHH
T ss_pred HHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHH
Confidence 34556667777766666544431 1255545556778899999988777777777777776655443211 0 0100
Q ss_pred --------ccCCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 134 --------YVASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 134 --------~~~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
...-+.+.++.|+-=+++.++..+.++.
T Consensus 135 ~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~ 170 (250)
T PF01226_consen 135 GEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWL 170 (250)
T ss_dssp HHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1112346788888888888888887776
No 35
>PRK10805 formate transporter; Provisional
Probab=82.58 E-value=35 Score=30.33 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHh---CCC--Cccc
Q 025197 59 VVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFAT---NGM--RPVG 132 (256)
Q Consensus 59 ~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~---~~~--~~~~ 132 (256)
+..++.+.+++.+.+...+.. +| |-..+++ .+.+|.++.+.+-.|.-=++|=++|+++..++. +.. ..+.
T Consensus 69 ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T PRK10805 69 LVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_pred HHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccH
Confidence 444666666666666654443 44 5555544 678899999888555555555555555443322 110 0011
Q ss_pred c-----c---cCCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 133 F-----Y---VASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 133 ~-----~---~~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
+ . ..-+.+.++.|+-=++|.++..+.++.
T Consensus 145 ~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 011346677777777788887777765
No 36
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=48.56 E-value=2.7e+02 Score=27.21 Aligned_cols=130 Identities=22% Similarity=0.214 Sum_probs=69.3
Q ss_pred cCCCcccc---hHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHH
Q 025197 78 NTSGGHVN---PAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFG 154 (256)
Q Consensus 78 ~iSGah~N---PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~ 154 (256)
.-++|+.- .+|+.+++-...-|......++.+.++|+.+|....+.+.+.. +.+. .+.=++.-++
T Consensus 361 ~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~-----------~~f~-~L~l~l~~~l 428 (650)
T PF04632_consen 361 GWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHL-----------DGFP-LLALVLAPFL 428 (650)
T ss_pred CCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----------CcHH-HHHHHHHHHH
Confidence 33444443 3344444444556888999999999999999999988887532 1111 1111122222
Q ss_pred HHHHHHHhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHH
Q 025197 155 LVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIY 234 (256)
Q Consensus 155 l~~~i~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~ 234 (256)
+... +. ..+++ +.....++.+.......-. .....|++. +.--.++.++|.+++.+.+
T Consensus 429 ~~~~-~~-~~~p~------~~~~g~~~~v~f~~~~~~~-n~~~~d~~~-------------f~n~~la~l~G~~~a~l~~ 486 (650)
T PF04632_consen 429 FLGG-LL-MARPR------TAYIGLGFAVFFLLLLGPG-NPYSYDFAT-------------FLNRALAILLGIVIAALVF 486 (650)
T ss_pred HHHH-HH-HcCch------HHHHHHHHHHHHHHHhcCC-CCCCCCHHH-------------HHHHHHHHHHHHHHHHHHH
Confidence 2111 11 12222 2344445544444332221 123333332 2223467789999999999
Q ss_pred HHHhcCC
Q 025197 235 EYIVIPT 241 (256)
Q Consensus 235 ~~l~~~~ 241 (256)
+++.+..
T Consensus 487 ~li~p~~ 493 (650)
T PF04632_consen 487 RLIRPFS 493 (650)
T ss_pred HHHCCCC
Confidence 9887765
No 37
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=41.82 E-value=8.7 Score=29.24 Aligned_cols=20 Identities=30% Similarity=0.493 Sum_probs=16.7
Q ss_pred cCCCcccchHHHHHHHHhCC
Q 025197 78 NTSGGHVNPAVTFGALLGGR 97 (256)
Q Consensus 78 ~iSGah~NPavTla~~l~g~ 97 (256)
.=|+||+||.+.++-.+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999998654
No 38
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=30.60 E-value=13 Score=33.92 Aligned_cols=22 Identities=27% Similarity=0.324 Sum_probs=18.2
Q ss_pred HhhcCCCcccchHHHHHHHHhC
Q 025197 75 SSINTSGGHVNPAVTFGALLGG 96 (256)
Q Consensus 75 ~~~~iSGah~NPavTla~~l~g 96 (256)
+.+.-||||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3456789999999999988864
No 39
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=28.10 E-value=3e+02 Score=22.06 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025197 100 VVRAIYYWIAQLLGAIVAALLLRFAT 125 (256)
Q Consensus 100 ~~~~~~yi~aQ~~Ga~~g~~l~~~~~ 125 (256)
+.-.+.+..+-+.|+++|..+.+.+.
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l~~L~ 148 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILLKALK 148 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55566777778888888877776553
No 40
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=26.02 E-value=4.8e+02 Score=23.35 Aligned_cols=47 Identities=30% Similarity=0.552 Sum_probs=29.8
Q ss_pred CCCccch---hhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 194 DGASMNP---ARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 194 sG~~lNP---A~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
.+.++|| +|++..++.++.| .|++|++-..=+++...+..+-..+..
T Consensus 223 ~l~~~G~~a~~~a~~~al~gg~~--a~~fwiGV~giGliiplll~~~~~~k~ 272 (305)
T COG3301 223 VLLSLGGVAAARALATALAGGFW--AWVFWIGVLGLGLIIPLLLKFGVNPKV 272 (305)
T ss_pred HHHHhCcHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3445555 5677778877777 778887765544666666665555543
No 41
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=24.43 E-value=5e+02 Score=22.95 Aligned_cols=58 Identities=12% Similarity=-0.052 Sum_probs=39.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHH
Q 025197 98 ISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGL 155 (256)
Q Consensus 98 ~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l 155 (256)
.+|...+-+++-|-+=+-+|+.+.+...++.+.............++.+.|...|++=
T Consensus 97 ~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~~~~~~~~~~~~~~~~~~l~dl~~~~~G 154 (271)
T TIGR02587 97 TSLKEIVGKVAFQGVPFSLGAALARQQLGDTNQNNSLSEGKQNSEYGYLAELFAMLVG 154 (271)
T ss_pred CCHHHHHHHHHHHhCcHHHHHHHHHHHhCCCcCccccchhhhcchhhhHHHHHHHHHH
Confidence 4799999999999999999999999988754322111111224455566666666553
No 42
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=23.07 E-value=3.1e+02 Score=24.83 Aligned_cols=48 Identities=25% Similarity=0.578 Sum_probs=34.1
Q ss_pred CCccchhhhHHHHHcc--------CCCccchh-HhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 195 GASMNPARAFGPALVG--------WRWRNHWI-YWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 195 G~~lNPA~~lg~~~~~--------~~~~~~wv-y~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
+-.+.|-..|.+.... .++++||. =+.|-++|+.+|...++.++....
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f~ 266 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNFK 266 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 4456666666665543 26778886 357889999999999998876644
No 43
>PRK11375 allantoin permease; Provisional
Probab=21.35 E-value=7.2e+02 Score=23.67 Aligned_cols=24 Identities=25% Similarity=0.285 Sum_probs=19.3
Q ss_pred hHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 218 IYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 218 vy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
.|..+.+.|-++++++|..+....
T Consensus 449 l~~~~~~~g~iva~~~Y~~l~~~~ 472 (484)
T PRK11375 449 LSRVSWFVGVIVAFVAYALLKKRT 472 (484)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhhC
Confidence 366788899999999998886544
No 44
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=21.15 E-value=5.3e+02 Score=22.04 Aligned_cols=101 Identities=21% Similarity=0.254 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhC---C--CCc-
Q 025197 58 LVVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATN---G--MRP- 130 (256)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~---~--~~~- 130 (256)
.+..++.+.+++.+.+...+.. +| |-......++.||.+|.+.+--|.-=.+|=++|+.+...+.. . ...
T Consensus 43 ~~l~~~~F~~gl~~Iv~~g~eLfTg---n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~ 119 (239)
T TIGR00790 43 KLVGGATFPIGLILVVIAGSDLFTG---NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANG 119 (239)
T ss_pred HHHHHHHHHHHHheeeeeCcccccc---chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcc
Confidence 3444565555555554433221 22 433333446788899998887777777777777666544431 1 001
Q ss_pred cc--c-----ccCCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 131 VG--F-----YVASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 131 ~~--~-----~~~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
+. . ...-+.+.++.++-=+++.++..+.+..
T Consensus 120 ~~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~lav~~ 157 (239)
T TIGR00790 120 PWGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0112346677777777777777776654
Done!