Query 025197
Match_columns 256
No_of_seqs 187 out of 1473
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:36:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 2.3E-54 7.9E-59 383.3 23.9 224 15-242 47-273 (340)
2 3gd8_A Aquaporin-4; proton exc 100.0 6.1E-54 2.1E-58 364.7 23.2 220 17-240 1-223 (223)
3 1j4n_A Aquaporin 1; membrane p 100.0 2E-53 6.9E-58 371.0 23.2 230 12-242 3-237 (271)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 1.5E-52 5.2E-57 366.2 26.4 224 17-242 42-268 (279)
5 2zz9_A Aquaporin-4; water tran 100.0 4E-53 1.4E-57 372.4 22.7 228 11-242 4-234 (301)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.8E-52 6.2E-57 363.7 24.3 222 13-242 5-230 (266)
7 3cn5_A Aquaporin; membrane pro 100.0 5E-53 1.7E-57 372.5 19.7 229 11-242 52-291 (304)
8 2b6o_A Aquaporin-0, lens fiber 100.0 6.2E-52 2.1E-56 360.2 25.4 223 12-242 2-227 (263)
9 3llq_A Aquaporin Z 2; aquapori 100.0 3.5E-51 1.2E-55 352.8 22.7 217 15-238 25-253 (256)
10 2o9g_A Aquaporin Z; integral m 100.0 1.3E-50 4.3E-55 346.8 24.1 217 18-241 3-233 (234)
11 1ldf_A Glycerol uptake facilit 100.0 4.7E-51 1.6E-55 358.1 21.7 222 16-243 4-260 (281)
12 2f2b_A Aquaporin AQPM; protein 100.0 3.8E-50 1.3E-54 346.4 24.7 220 18-239 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 1.1E-50 3.7E-55 351.8 13.4 220 17-242 7-246 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 3.2E-15 1.1E-19 129.4 10.7 101 140-241 8-111 (263)
15 2f2b_A Aquaporin AQPM; protein 99.6 6.5E-15 2.2E-19 126.4 10.8 102 15-126 139-245 (246)
16 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 2.6E-14 8.8E-19 123.8 9.1 102 139-240 9-112 (266)
17 2zz9_A Aquaporin-4; water tran 99.5 9.7E-14 3.3E-18 121.9 11.1 103 139-241 10-118 (301)
18 3llq_A Aquaporin Z 2; aquapori 99.5 4.8E-14 1.6E-18 121.2 9.0 101 140-240 28-133 (256)
19 2o9g_A Aquaporin Z; integral m 99.5 1.1E-13 3.9E-18 117.8 9.5 101 141-241 4-109 (234)
20 3iyz_A Aquaporin-4; water tran 99.5 8.8E-14 3E-18 123.4 8.8 102 140-241 50-157 (340)
21 3gd8_A Aquaporin-4; proton exc 99.5 9.3E-14 3.2E-18 117.5 8.4 101 140-240 2-108 (223)
22 1j4n_A Aquaporin 1; membrane p 99.4 1.9E-13 6.3E-18 118.8 8.9 102 140-241 9-121 (271)
23 3cn5_A Aquaporin; membrane pro 99.4 2.4E-13 8.3E-18 119.6 8.5 102 140-241 59-167 (304)
24 2w2e_A AQY1, aquaporin, aquapo 99.4 5.9E-13 2E-17 116.0 10.6 102 140-241 43-155 (279)
25 1ldf_A Glycerol uptake facilit 99.4 2.8E-13 9.5E-18 118.4 8.2 101 140-240 6-110 (281)
26 3c02_A Aquaglyceroporin; membr 99.4 1.7E-13 5.7E-18 118.4 6.7 102 140-241 8-113 (258)
27 3kcu_A Probable formate transp 84.2 19 0.00064 30.7 16.9 100 58-161 68-181 (285)
28 3tds_E Formate/nitrite transpo 73.1 41 0.0014 28.3 17.0 102 57-161 63-176 (268)
29 4fc4_A Nitrite transporter NIR 67.7 54 0.0018 27.5 17.5 101 58-161 58-170 (261)
30 3kly_A Putative formate transp 64.1 66 0.0023 27.2 16.5 100 58-161 67-180 (280)
31 3s2u_A UDP-N-acetylglucosamine 38.9 3.3 0.00011 36.2 -1.9 21 77-97 9-29 (365)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-54 Score=383.30 Aligned_cols=224 Identities=40% Similarity=0.665 Sum_probs=195.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHH
Q 025197 15 AHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALL 94 (256)
Q Consensus 15 ~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 94 (256)
..++++|++++||+|||+|+|+++++++.. .+.....+.+++.++++||+++++++++++++||||+|||||+++++
T Consensus 47 ~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~---~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l 123 (340)
T 3iyz_A 47 WTQAFWKAVTAEFLAMLIFVLLSVGSTINW---GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 123 (340)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHH
Confidence 346789999999999999999999998743 11122234578899999999999999999999999999999999999
Q ss_pred hCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---ccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 025197 95 GGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMR---PVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSL 171 (256)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~ 171 (256)
.|+++|.+++.||++|++||++|+++++.++++.. ...+.+.++.+..++++.|+++||+|+++++.+ .|+++...
T Consensus 124 ~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~ 202 (340)
T 3iyz_A 124 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDV 202 (340)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCc
Confidence 99999999999999999999999999999886432 223445667889999999999999999999985 56555444
Q ss_pred CChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 172 GIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 172 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
....|+.||+++.+.+..++++||+++||||||||+++.++|.++|+||++|++|+++|+++|++++.++.
T Consensus 203 ~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 203 TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 45689999999988888888999999999999999999999999999999999999999999999997754
No 2
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-54 Score=364.67 Aligned_cols=220 Identities=41% Similarity=0.682 Sum_probs=192.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhC
Q 025197 17 PDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGG 96 (256)
Q Consensus 17 ~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 96 (256)
++++|++++||+||++|+++++++++.. .++......+++.+++++|+++++.+++++++||+|+|||||+++++.|
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~---~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g 77 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINW---GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 77 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCT---TTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC
Confidence 4679999999999999999999988643 1112223467899999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 025197 97 RISVVRAIYYWIAQLLGAIVAALLLRFATNGM---RPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGI 173 (256)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~ 173 (256)
+++|++++.|+++|++||++|+.+++.++++. ....+.+.++.+..++++.|+++|++|+++++.+ .|+|++....
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~-~~~~~~~~~~ 156 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFAS-CDSKRTDVTG 156 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-TCTTCSCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHH-hccccCCccC
Confidence 99999999999999999999999999988642 1233455677899999999999999999999984 6666544445
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 174 VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 174 ~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
..|+.||+++...+..+++.||+++|||||||||++.++|+++|+||++|++|+++++++|++++.|
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 7899999999888888888999999999999999999999999999999999999999999998754
No 3
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=2e-53 Score=371.02 Aligned_cols=230 Identities=43% Similarity=0.676 Sum_probs=197.6
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhc--ccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHH
Q 025197 12 DEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKI--SKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVT 89 (256)
Q Consensus 12 ~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavT 89 (256)
+|.++++++|++++||+||++|+|+++++.+..... .+.......+++.+++++|+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 456678899999999999999999999988653211 111111234688999999999999999999999999999999
Q ss_pred HHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---ccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccC
Q 025197 90 FGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMR---PVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDP 166 (256)
Q Consensus 90 la~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~ 166 (256)
+++++.|+++|++++.||++|++||++|+++++.++.+.. ...+.+.++.+..++++.|+++|++|+++++.+ .|+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~ 161 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDR 161 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccc
Confidence 9999999999999999999999999999999999986432 223345567788999999999999999999984 676
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 167 KRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 167 ~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
++...+.+.|+.||+++...++.++++||+++||||||||++++++|+++|+||++|++|+++|+++|++++.+++
T Consensus 162 ~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 162 RRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5544456799999999998888888899999999999999999999999999999999999999999999988764
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.5e-52 Score=366.21 Aligned_cols=224 Identities=29% Similarity=0.448 Sum_probs=190.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcc--cCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHH
Q 025197 17 PDTMRAALAEFVSTLIFVFAGEGSILALDKIS--KATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALL 94 (256)
Q Consensus 17 ~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 94 (256)
++.+|++++||+||++|+|+++++........ .+......+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 57889999999999999999998753222111 1112223568889999999999999999999999999999999999
Q ss_pred hCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh
Q 025197 95 GGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIV 174 (256)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~~ 174 (256)
.|+++|++++.|+++|++||++|+++++.++++.......+.++.+..++++.|+++|++|+++++.+..++++ .+.+
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~~ 199 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATWF 199 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGGG
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcCc
Confidence 99999999999999999999999999999987643323334456789999999999999999999986443332 3357
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCC-ccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 175 GPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRW-RNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 175 ~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~-~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
.|+.||+++.+..+++++.||+++||||||||+++.+.| .++|+||++|++|+++|+++|+++...++
T Consensus 200 ~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~ 268 (279)
T 2w2e_A 200 APFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNY 268 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 999999999999999999999999999999999998765 68999999999999999999999987765
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=4e-53 Score=372.40 Aligned_cols=228 Identities=39% Similarity=0.650 Sum_probs=194.4
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHH
Q 025197 11 ADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTF 90 (256)
Q Consensus 11 ~~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTl 90 (256)
.++..+++++|++++||+||++|+|+++++++.... .......+++.+++++|+++++++++++++||||+|||||+
T Consensus 4 ~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~---~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 80 (301)
T 2zz9_A 4 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGG---SENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTV 80 (301)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTC---C-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHH
Confidence 456678999999999999999999999998864321 11123457888999999999999999999999999999999
Q ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc---cccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 025197 91 GALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRP---VGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPK 167 (256)
Q Consensus 91 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 167 (256)
++++.|+++|++++.|+++|++||++|+++++.++++... ..+.+.++.+..++++.|+++|++|+++++.+ .|++
T Consensus 81 a~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~ 159 (301)
T 2zz9_A 81 AMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDK 159 (301)
T ss_dssp HHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSS
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 9999999999999999999999999999999999865321 23345567789999999999999999999984 5655
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 168 RGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 168 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
+.....+.|+.||+++.+.++.++++||+++||||||||+++.++|.++|+||++|++|+++|+++|++++.++.
T Consensus 160 ~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 160 RTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred CCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 544456799999999988888888999999999999999999999999999999999999999999999987543
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-52 Score=363.70 Aligned_cols=222 Identities=40% Similarity=0.643 Sum_probs=195.3
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHH
Q 025197 13 EAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGA 92 (256)
Q Consensus 13 ~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~ 92 (256)
|..+++++|++++||+||++|+|+++++.+.. . ....+++.+++++|+++++.+++++++||||+|||||+++
T Consensus 5 e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~---~----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~ 77 (266)
T 3d9s_A 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---P----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLAL 77 (266)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC---S----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC---C----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHH
Confidence 55678899999999999999999999987421 1 1124788999999999999999999999999999999999
Q ss_pred HHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025197 93 LLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGM---RPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRG 169 (256)
Q Consensus 93 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~ 169 (256)
++.|+++|++++.|+++|++||++|+++++.++++. ....+.+.++.+..++++.|+++|++|+++++.+ .|+++.
T Consensus 78 ~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~ 156 (266)
T 3d9s_A 78 LVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRRT 156 (266)
T ss_dssp HHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCC
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCC
Confidence 999999999999999999999999999999998642 1223345567789999999999999999999985 676654
Q ss_pred CCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCcc-chhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 170 SLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRN-HWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 170 ~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~-~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
....+.|+.||+++.+.++.++++||+++||||||||++++++|++ +|+||++|++|+++|+++|++++.++.
T Consensus 157 ~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 157 SPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 4446799999999999999999999999999999999999999998 999999999999999999999987654
No 7
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=5e-53 Score=372.55 Aligned_cols=229 Identities=38% Similarity=0.624 Sum_probs=195.9
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHH
Q 025197 11 ADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTF 90 (256)
Q Consensus 11 ~~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTl 90 (256)
.+|..+++++|++++||+||++|+|+++++++......+ .....+++.+++++|+++++.+++++++||||+|||||+
T Consensus 52 ~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~--~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 129 (304)
T 3cn5_A 52 LGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETV--VCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTF 129 (304)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS--TTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccC--CCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHH
Confidence 356677899999999999999999999999875432221 123457889999999999999999999999999999999
Q ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccC
Q 025197 91 GALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGM----RPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDP 166 (256)
Q Consensus 91 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~ 166 (256)
++++.|+++|++++.||++|++||++|+++++.++++. ......+.++.+..++++.|+++|++|+++++. ..|+
T Consensus 130 a~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~-~~d~ 208 (304)
T 3cn5_A 130 GLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFS-ATDP 208 (304)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TEEE
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhh-eecC
Confidence 99999999999999999999999999999999987531 112233456778999999999999999999996 5775
Q ss_pred CCCCCCC----hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHc---cCCCccchhHhhhhhHHHHHHHHHHHHHhc
Q 025197 167 KRGSLGI----VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV---GWRWRNHWIYWVGPFLGAGLAALIYEYIVI 239 (256)
Q Consensus 167 ~~~~~~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~---~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~ 239 (256)
++...+. +.|+.||++++++.++.+++||+++||||||||+++ ++.|+++|+||++|++|+++|+++|++++.
T Consensus 209 ~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~ 288 (304)
T 3cn5_A 209 KRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLR 288 (304)
T ss_dssp EEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhC
Confidence 5433322 789999999999999999999999999999999998 568999999999999999999999999987
Q ss_pred CCC
Q 025197 240 PTE 242 (256)
Q Consensus 240 ~~~ 242 (256)
+++
T Consensus 289 ~~~ 291 (304)
T 3cn5_A 289 AAA 291 (304)
T ss_dssp CCC
T ss_pred CCC
Confidence 664
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=6.2e-52 Score=360.20 Aligned_cols=223 Identities=40% Similarity=0.650 Sum_probs=195.9
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHH
Q 025197 12 DEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFG 91 (256)
Q Consensus 12 ~~~~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla 91 (256)
+|..+++++|++++||+||++|+++++++.+.. + ....+++.+++++|+++++.+++++++||+|+|||||++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~----~---~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla 74 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW----A---PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFA 74 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC----C---SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC----C---CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHH
Confidence 356678899999999999999999999887421 1 123478889999999999999999999999999999999
Q ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---ccccccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025197 92 ALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMR---PVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKR 168 (256)
Q Consensus 92 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~ 168 (256)
+++.|+++|.+++.|+++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.+ .|+++
T Consensus 75 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 153 (263)
T 2b6o_A 75 FLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERR 153 (263)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 99999999999999999999999999999999987532 233455677889999999999999999999985 67665
Q ss_pred CCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCCCccchhHhhhhhHHHHHHHHHHHHHhcCCC
Q 025197 169 GSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWRWRNHWIYWVGPFLGAGLAALIYEYIVIPTE 242 (256)
Q Consensus 169 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~~ 242 (256)
.....+.|+.||+++.+.++.++++||+++||||||||++++++|+++|+||++|++|+++|+++|++++.++.
T Consensus 154 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 154 NGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 44456799999999999999999999999999999999999999999999999999999999999999987653
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.5e-51 Score=352.81 Aligned_cols=217 Identities=29% Similarity=0.406 Sum_probs=184.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHH
Q 025197 15 AHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALL 94 (256)
Q Consensus 15 ~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 94 (256)
.+++++|++++||+||++|+|++|++++...... ....+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~----~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 100 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP----ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTV 100 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT----TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHH
Confidence 3577899999999999999999999875432211 123578999999999999999999999999999999999999
Q ss_pred hCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC---Cc------cccccC-CCchhhHHHHHHHHHHHHHHHHHHHhhc
Q 025197 95 GGRISVVRAIYYWIAQLLGAIVAALLLRFATNGM---RP------VGFYVA-SGVGEGHGLVLEIVMTFGLVYTVYATVI 164 (256)
Q Consensus 95 ~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~---~~------~~~~~~-~~~~~~~~~~~E~~~T~~l~~~i~~~~~ 164 (256)
.|+++|++++.|+++|++||++|+++++.++++. +. ..+... ...+..++++.|+++|++|+++++. ..
T Consensus 101 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~-~~ 179 (256)
T 3llq_A 101 AGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG-ST 179 (256)
T ss_dssp TTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 9999999999999999999999999999987531 10 111222 2568899999999999999999998 46
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCC--CccchhHhhhhhHHHHHHHHHHHHHh
Q 025197 165 DPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWR--WRNHWIYWVGPFLGAGLAALIYEYIV 238 (256)
Q Consensus 165 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~--~~~~wvy~vap~~Ga~~a~~~~~~l~ 238 (256)
|+|+. ..+.|+.||+++.++.++.+++||+++|||||||||++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 180 d~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 180 HGRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp STTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC--ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 76542 35789999999999999999999999999999999998764 56899999999999999999999985
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1.3e-50 Score=346.76 Aligned_cols=217 Identities=30% Similarity=0.433 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhCC
Q 025197 18 DTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGGR 97 (256)
Q Consensus 18 ~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 97 (256)
+++|++++||+||++|+|+++++....... +....+++.+++++|+++++.+++++++||+|+|||||+++++.|+
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~----~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~ 78 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGF----PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR 78 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTC----TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCC----CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC
Confidence 468999999999999999999987532211 1123578899999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---c--------ccccc-CCCchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 025197 98 ISVVRAIYYWIAQLLGAIVAALLLRFATNGMR---P--------VGFYV-ASGVGEGHGLVLEIVMTFGLVYTVYATVID 165 (256)
Q Consensus 98 ~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~--------~~~~~-~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~ 165 (256)
++|++++.|+++|++||++|+.+++.++++.. . ..+.. +.+.+..++++.|+++|++|+++++. ..|
T Consensus 79 ~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~-~~d 157 (234)
T 2o9g_A 79 FPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATD 157 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 99999999999999999999999999986421 0 11111 22568899999999999999999998 466
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccCC--CccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 166 PKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGWR--WRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 166 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~--~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
+|+ ...+.|+.||+++....+..+++||+++|||||||||++.++ |+++|+||++|++|+++|+++|++++.++
T Consensus 158 ~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 158 KFA--PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp TTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCC--ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 543 235799999999999999999999999999999999999875 55999999999999999999999997653
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=4.7e-51 Score=358.15 Aligned_cols=222 Identities=27% Similarity=0.414 Sum_probs=185.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHh
Q 025197 16 HPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLG 95 (256)
Q Consensus 16 ~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 95 (256)
+++++|++++||+||++|+|++++++.... ..+. ..+...+++++|+++++.+++++++||||+|||||+++++.
T Consensus 4 ~~~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~~----~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~ 78 (281)
T 1ldf_A 4 TSTLKGQCIAEFLGTGLLIFFGVGCVAALK-VAGA----SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLF 78 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCC----CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC----CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHc
Confidence 457899999999999999999998875432 2211 12444589999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C---------------ccccc--cCCCchhhHHHHHHHHHHHH
Q 025197 96 GRISVVRAIYYWIAQLLGAIVAALLLRFATNGM----R---------------PVGFY--VASGVGEGHGLVLEIVMTFG 154 (256)
Q Consensus 96 g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~---------------~~~~~--~~~~~~~~~~~~~E~~~T~~ 154 (256)
|+++|++++.|+++|++||++|+++++.++++. + ...+. +.++.+..++++.|+++|++
T Consensus 79 g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~ 158 (281)
T 1ldf_A 79 ACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAI 158 (281)
T ss_dssp SCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887421 0 01222 34457899999999999999
Q ss_pred HHHHHHHhhccCCCCC-CCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-------CC------ccchhHh
Q 025197 155 LVYTVYATVIDPKRGS-LGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-------RW------RNHWIYW 220 (256)
Q Consensus 155 l~~~i~~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-------~~------~~~wvy~ 220 (256)
|+++++.+ .|+++.. .+.+.|+.||+++.++.++.+++||+++|||||||||++.. .| .++|+||
T Consensus 159 Lv~~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~ 237 (281)
T 1ldf_A 159 LMGLILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPL 237 (281)
T ss_dssp HHHHHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHH
T ss_pred HHHHHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHh
Confidence 99999995 6665543 24689999999999999999999999999999999999751 22 2799999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCC
Q 025197 221 VGPFLGAGLAALIYEYIVIPTEP 243 (256)
Q Consensus 221 vap~~Ga~~a~~~~~~l~~~~~~ 243 (256)
++|++|+++|+++|++++.+++|
T Consensus 238 vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 238 FGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHHHHHHHhCccCC
Confidence 99999999999999999987664
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=3.8e-50 Score=346.43 Aligned_cols=220 Identities=33% Similarity=0.427 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCC--------CC----CCchhHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 025197 18 DTMRAALAEFVSTLIFVFAGEGSILALDKISKAT--------TT----SPSDLVVIALAHALALFAAVASSINTSGGHVN 85 (256)
Q Consensus 18 ~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~N 85 (256)
+++|++++||+||++|+|+++++.+......+++ .. ...+++.+++++|+++++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5789999999999999999999887543222110 00 22457789999999999999999999999999
Q ss_pred hHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---ccccc--cCCCchhhHHHHHHHHHHHHHHHHHH
Q 025197 86 PAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMR---PVGFY--VASGVGEGHGLVLEIVMTFGLVYTVY 160 (256)
Q Consensus 86 PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~~---~~~~~--~~~~~~~~~~~~~E~~~T~~l~~~i~ 160 (256)
||||+++++.|+++|++++.|+++|++||++|+.+++.+++++. ...+. +.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999997621 12222 33577899999999999999999999
Q ss_pred HhhccCCCCCCCChHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHc--c----CCCccchhHhhhhhHHHHHHHHHH
Q 025197 161 ATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV--G----WRWRNHWIYWVGPFLGAGLAALIY 234 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~--~----~~~~~~wvy~vap~~Ga~~a~~~~ 234 (256)
.+..|+++. ....|+.+|+++.+.+++.+++||+++||||||||++. . .+|++.|+||++|++|+++|+++|
T Consensus 163 ~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 864454432 35789999999999999999999999999999999992 2 368899999999999999999999
Q ss_pred HHHhc
Q 025197 235 EYIVI 239 (256)
Q Consensus 235 ~~l~~ 239 (256)
++++.
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 99875
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-50 Score=351.82 Aligned_cols=220 Identities=22% Similarity=0.369 Sum_probs=184.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHHhC
Q 025197 17 PDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALLGG 96 (256)
Q Consensus 17 ~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 96 (256)
++++|++++||+||++|+|+++++...... ++ ...+++.+++++|+++++.+++++++||||+|||||+++++.|
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~--~~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g 81 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHT--TG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSIN 81 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SS---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CC---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhC
Confidence 567999999999999999999988764321 11 1347888999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCC----Cccc----cccCCCchhhHHHHHHHHHHHHHHHHHHHhhccCCC
Q 025197 97 RISVVRAIYYWIAQLLGAIVAALLLRFATNGM----RPVG----FYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKR 168 (256)
Q Consensus 97 ~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~~~----~~~~----~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~ 168 (256)
+++|++++.|+++|++||++|+++++.++++. ..+. .......+..++++.|+++|++|+++++.+ .|+|+
T Consensus 82 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~~ 160 (258)
T 3c02_A 82 KFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVV-VDENI 160 (258)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHH-hCccc
Confidence 99999999999999999999999999987521 1111 111123455669999999999999999985 56554
Q ss_pred C-CCCChH-HHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC------CC----ccchhHhhhhhHHHHHHHHHHHH
Q 025197 169 G-SLGIVG-PLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW------RW----RNHWIYWVGPFLGAGLAALIYEY 236 (256)
Q Consensus 169 ~-~~~~~~-~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~------~~----~~~wvy~vap~~Ga~~a~~~~~~ 236 (256)
+ ..+.+. |+.||+++.+..++.+++||+++||||||||+++.+ .| +++|+||++|++|+++|+++|++
T Consensus 161 ~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~ 240 (258)
T 3c02_A 161 CGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDK 240 (258)
T ss_dssp HCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHH
Confidence 2 234577 999999999999999999999999999999999862 34 66999999999999999999999
Q ss_pred HhcCCC
Q 025197 237 IVIPTE 242 (256)
Q Consensus 237 l~~~~~ 242 (256)
++.+++
T Consensus 241 ~~~~~~ 246 (258)
T 3c02_A 241 VICPLV 246 (258)
T ss_dssp THHHHH
T ss_pred HhcccC
Confidence 998765
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.60 E-value=3.2e-15 Score=129.39 Aligned_cols=101 Identities=20% Similarity=0.162 Sum_probs=86.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCccc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRNH 216 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~~ 216 (256)
+.++.++.|+++|++|++..+.+....+. .... ...+.+|+++++.+++.+++||+|+|||++++.++.+. .|.+.
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~-~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~ 86 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA 86 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCS-SSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence 56889999999999999999886543222 2222 25688899999999999999999999999999999876 79999
Q ss_pred hhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 217 WIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 217 wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
|+|+++|++|+++|+.+.+.+++++
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999999999999999998754
No 15
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.58 E-value=6.5e-15 Score=126.42 Aligned_cols=102 Identities=27% Similarity=0.361 Sum_probs=83.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHH
Q 025197 15 AHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDLVVIALAHALALFAAVASSINTSGGHVNPAVTFGALL 94 (256)
Q Consensus 15 ~~~~~~~~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 94 (256)
...+.++.++.|+++|++|++..+++.... +. +.+ ..++.+|+.++...+..+++||+|+|||+|++..+
T Consensus 139 ~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~-----~~---~~~--~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l 208 (246)
T 2f2b_A 139 PGISYWQAMLAEVVGTFLLMITIMGIAVDE-----RA---PKG--FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYL 208 (246)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHTTST-----TS---CTT--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHheeeEEecCC-----CC---CCc--eeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHH
Confidence 356788999999999999999988654211 11 111 35788899999999999999999999999999888
Q ss_pred -----hCCcchHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 025197 95 -----GGRISVVRAIYYWIAQLLGAIVAALLLRFATN 126 (256)
Q Consensus 95 -----~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~ 126 (256)
.++..|.+.|+||++|++|+++|+++.+.+.+
T Consensus 209 ~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 209 NDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 34667899999999999999999999887654
No 16
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.52 E-value=2.6e-14 Score=123.81 Aligned_cols=102 Identities=20% Similarity=0.185 Sum_probs=85.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC-hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCccc
Q 025197 139 VGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGI-VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRNH 216 (256)
Q Consensus 139 ~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~~ 216 (256)
.+.++.++.|+++|++|++..+.++....+...+. ...+..|+++++.+++.+++||+|+|||++++..+.+. .|.+.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRA 88 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHH
Confidence 35688999999999999999888654322222221 25678899999999999999999999999999999876 79999
Q ss_pred hhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 217 WIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 217 wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
+.|+++|++|+++|+.+.+.++++
T Consensus 89 ~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 89 FFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999854
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.50 E-value=9.7e-14 Score=121.89 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=85.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhccCCCC---CCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-C
Q 025197 139 VGEGHGLVLEIVMTFGLVYTVYATVIDPKRG---SLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-R 212 (256)
Q Consensus 139 ~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~---~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~ 212 (256)
.+.++.++.|+++|++|++..+++....... .... ...+..|+++++.+++.+++||+|+|||++++..+.+. .
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 89 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 89 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCC
Confidence 3678999999999999999888754332111 1112 25678899999999999999999999999999999876 7
Q ss_pred CccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 213 WRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 213 ~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
|.+...|+++|++|+++|+.+.+.+++++
T Consensus 90 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 90 IAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999988754
No 18
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=4.8e-14 Score=121.25 Aligned_cols=101 Identities=24% Similarity=0.154 Sum_probs=83.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcc-CCCC-CCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVID-PKRG-SLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWR 214 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~-~~~~-~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~ 214 (256)
+..+.+++|+++|++|++..++++.. .+.+ .... ...+..|+++++.+++.+++||+|+|||++++.++.+. .|.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 56889999999999999988775332 1111 1112 24577899999999999999999999999999999876 799
Q ss_pred cchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 215 NHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 215 ~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
+...|+++|++|+++|+.+.+.++..
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999988853
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.47 E-value=1.1e-13 Score=117.78 Aligned_cols=101 Identities=24% Similarity=0.173 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCC-CCCCC-C--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCcc
Q 025197 141 EGHGLVLEIVMTFGLVYTVYATVIDPK-RGSLG-I--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRN 215 (256)
Q Consensus 141 ~~~~~~~E~~~T~~l~~~i~~~~~~~~-~~~~~-~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~ 215 (256)
..|.++.|+++|++|++..+.++.-++ .+..+ . ...+..|+++++.+++.+++||+|+|||++++..+.+. .|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 478899999999999998776543222 11111 1 24578899999999999999999999999999999886 7999
Q ss_pred chhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 216 HWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 216 ~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
...|+++|++|+++|+.+.+.++++.
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999998754
No 20
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.47 E-value=8.8e-14 Score=123.38 Aligned_cols=102 Identities=17% Similarity=0.144 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccC--CCC-CCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CC
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVIDP--KRG-SLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RW 213 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~~--~~~-~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 213 (256)
+.++.+++||++|++|++..++++... +.+ .... ...+..|+++++.+++.+++||+|+|||++++.++.+. .|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 568999999999999999887764421 111 1112 24677899999999999999999999999999999876 69
Q ss_pred ccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 214 RNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 214 ~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
.....|+++|++|+++|+.+.+.+++++
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999988887654
No 21
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.47 E-value=9.3e-14 Score=117.46 Aligned_cols=101 Identities=17% Similarity=0.140 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccC--CCC-CCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CC
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVIDP--KRG-SLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RW 213 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~~--~~~-~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 213 (256)
+.+|.++.|+++|++|++..++++... +.+ +... ...+..|+++.+.+++.+++||+|+|||++++..+.++ .|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 457899999999999999888764431 111 1112 34677899999999999999999999999999999876 79
Q ss_pred ccchhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 214 RNHWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 214 ~~~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
.+...|+++|++|+++|+.+.+.++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999998888764
No 22
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.45 E-value=1.9e-13 Score=118.83 Aligned_cols=102 Identities=20% Similarity=0.209 Sum_probs=83.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccC-------CC-CCCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVIDP-------KR-GSLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 209 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~~-------~~-~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~ 209 (256)
+.++.++.|+++|++|++..++++... +. ..... ...+..|+++++.+++.+++||+|+|||++++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 567899999999999999877754311 11 11111 356788999999999999999999999999999998
Q ss_pred cC-CCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 210 GW-RWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 210 ~~-~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
+. .|.+...|+++|++|+++|+.+.+.++.+.
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 121 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSSL 121 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 76 799999999999999999999999888543
No 23
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.43 E-value=2.4e-13 Score=119.58 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=84.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcc---CCCC-CCCC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-C
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVID---PKRG-SLGI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-R 212 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~---~~~~-~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~ 212 (256)
+.+|.+++|+++|++|++..+.++.. .+++ .... ...+..|+++++.+++.+++||+|+|||++++..+.+. .
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 57889999999999999988765332 1111 1112 24577899999999999999999999999999999876 7
Q ss_pred CccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 213 WRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 213 ~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
|.+...|+++|++|+++|+.+.+.++.++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999988653
No 24
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.43 E-value=5.9e-13 Score=115.97 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=82.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhh--ccCCC-----CCC-CC--hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATV--IDPKR-----GSL-GI--VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 209 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~--~~~~~-----~~~-~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~ 209 (256)
+.++.+++|+++|++|++..+..+ ..... +.. .. ...+..|+++++.+++.+++||+|+|||++++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 567889999999999998776532 11110 111 11 246778999999999999999999999999999998
Q ss_pred cC-CCccchhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 210 GW-RWRNHWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 210 ~~-~~~~~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
+. .|.+...|+++|++|+++|+.+.+.+++.+
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 86 799999999999999999999999998654
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.42 E-value=2.8e-13 Score=118.39 Aligned_cols=101 Identities=21% Similarity=0.119 Sum_probs=83.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcc--CCCCCCCC-hHHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCcc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVID--PKRGSLGI-VGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRN 215 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~--~~~~~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~ 215 (256)
+..+.++.|+++|++|++...+++.. .++...+. ...+..|+++.+.+++.+++||+|+|||++++..+.+. .|.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 56788999999999999977654321 11112222 25677899999999999999999999999999999876 7999
Q ss_pred chhHhhhhhHHHHHHHHHHHHHhcC
Q 025197 216 HWIYWVGPFLGAGLAALIYEYIVIP 240 (256)
Q Consensus 216 ~wvy~vap~~Ga~~a~~~~~~l~~~ 240 (256)
...|+++|++|+++|+.+.+.++.+
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999888865
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.42 E-value=1.7e-13 Score=118.38 Aligned_cols=102 Identities=21% Similarity=0.171 Sum_probs=83.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcc-CCCCCCCCh--HHHHHHHHHHHHHHhhcCCCCCccchhhhHHHHHccC-CCcc
Q 025197 140 GEGHGLVLEIVMTFGLVYTVYATVID-PKRGSLGIV--GPLAIGFIVGANILVGGPFDGASMNPARAFGPALVGW-RWRN 215 (256)
Q Consensus 140 ~~~~~~~~E~~~T~~l~~~i~~~~~~-~~~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~ 215 (256)
+..+.++.|+++|++|++....+... .+.+....+ ..+..|+++.+.+++.+++||+|+|||++++..+.+. .|.+
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 56788999999999999986654321 111111222 4577799999999999999999999999999999876 7999
Q ss_pred chhHhhhhhHHHHHHHHHHHHHhcCC
Q 025197 216 HWIYWVGPFLGAGLAALIYEYIVIPT 241 (256)
Q Consensus 216 ~wvy~vap~~Ga~~a~~~~~~l~~~~ 241 (256)
...|+++|++|+++|+.+.+.+++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 99999999999999999999988753
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=84.19 E-value=19 Score=30.74 Aligned_cols=100 Identities=18% Similarity=0.221 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHh--CCC---Ccc
Q 025197 58 LVVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFAT--NGM---RPV 131 (256)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~--~~~---~~~ 131 (256)
.+..++.+.+++.+.+...+.. +|-.+ .++ ..+.+|++|.+.+--|.-=.+|=++|+++..++. .+. ..+
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTgn~l---~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTSTVL---IVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTTTHH---HHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHhCccccccchH---HHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCch
Confidence 3455777777777777665554 44322 333 3568889998876665555555555555444331 110 000
Q ss_pred ---c--c---ccCCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 132 ---G--F---YVASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 132 ---~--~---~~~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
. . .-.-+.+..+.|+-=++|.++..+.+..
T Consensus 144 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 181 (285)
T 3kcu_A 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0112346778888778888888777776
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=73.11 E-value=41 Score=28.32 Aligned_cols=102 Identities=18% Similarity=0.249 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHh--CCCC-ccc
Q 025197 57 DLVVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFAT--NGMR-PVG 132 (256)
Q Consensus 57 ~~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~--~~~~-~~~ 132 (256)
..+..++.+.+++.+.+...+.. +| |=.......+.+|.+|.+.+--|.-=.+|=++|+++..++. .+.. .+.
T Consensus 63 ~~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 63 TKIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp HHHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 44556677777776666543332 22 43322234578999999987777777777777766554443 1111 110
Q ss_pred c-----cc---CCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 133 F-----YV---ASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 133 ~-----~~---~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
. .. .-+.+..+.|+-=+++.++..+.+..
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 176 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVLC 176 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 01345677777777788887777765
No 29
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=67.74 E-value=54 Score=27.48 Aligned_cols=101 Identities=13% Similarity=0.123 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHhC--C-CCccc-
Q 025197 58 LVVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATN--G-MRPVG- 132 (256)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~~--~-~~~~~- 132 (256)
.+..++.+.+++.+.+...+.. +| |=.......+.||.+|++.+--|.-=.+|=++|+++..++.. + ...+.
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~ 134 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVD 134 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchH
Confidence 3555677777766665533222 12 433332345678899998887776666666666655443331 1 10000
Q ss_pred --c--ccC---CCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 133 --F--YVA---SGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 133 --~--~~~---~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
. ... -..+..+.|+-=+++.++..+.+..
T Consensus 135 ~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 170 (261)
T 4fc4_A 135 TSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWM 170 (261)
T ss_dssp TSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 1124566677777777777777665
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=64.13 E-value=66 Score=27.21 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcC-CCcccchHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHHh--CC---CCcc
Q 025197 58 LVVIALAHALALFAAVASSINT-SGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFAT--NG---MRPV 131 (256)
Q Consensus 58 ~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~l~~~~~--~~---~~~~ 131 (256)
.+..++.+.+++.+.+...+.. +|-.+ .+++ .+.+|++|++.+--|.-=.+|=++|+++..++. .+ .+.+
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~~-~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 142 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL---ILVA-KASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGG 142 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCSS-SSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH---HHHH-HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCch
Confidence 3456777777777777766553 45444 2333 457888988877776666666666666554432 11 0010
Q ss_pred ---cc-----ccCCCchhhHHHHHHHHHHHHHHHHHHH
Q 025197 132 ---GF-----YVASGVGEGHGLVLEIVMTFGLVYTVYA 161 (256)
Q Consensus 132 ---~~-----~~~~~~~~~~~~~~E~~~T~~l~~~i~~ 161 (256)
.. .-.-+.+..+.|+-=++|.++..+.+..
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 180 (280)
T 3kly_A 143 QLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWM 180 (280)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0112346778888888888888877776
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=38.88 E-value=3.3 Score=36.22 Aligned_cols=21 Identities=33% Similarity=0.547 Sum_probs=16.8
Q ss_pred hcCCCcccchHHHHHHHHhCC
Q 025197 77 INTSGGHVNPAVTFGALLGGR 97 (256)
Q Consensus 77 ~~iSGah~NPavTla~~l~g~ 97 (256)
+.=||||++|+++++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 344789999999999888643
Done!