Query 025199
Match_columns 256
No_of_seqs 158 out of 1114
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 05:38:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p6c_A AQ_2013 protein; NPPSFA 100.0 4.2E-55 1.4E-59 363.5 16.4 134 61-199 1-135 (137)
2 1vmj_A Hypothetical protein TM 100.0 1.9E-53 6.4E-58 359.2 16.9 137 60-199 12-149 (151)
3 2p6h_A Hypothetical protein; s 100.0 4.4E-53 1.5E-57 350.2 15.8 130 64-199 2-132 (134)
4 1ve0_A Hypothetical protein (S 100.0 6.8E-53 2.3E-57 349.1 16.6 131 61-199 1-132 (134)
5 1vph_A Hypothetical protein SS 100.0 9.6E-53 3.3E-57 354.3 15.5 134 60-199 12-147 (149)
6 1vmh_A Uncharacterized conserv 100.0 2.5E-51 8.5E-56 344.1 14.8 128 65-199 16-144 (144)
7 1vmf_A Hypothetical protein; s 100.0 1.1E-50 3.9E-55 340.4 16.3 130 64-199 12-143 (145)
8 2cu5_A Conserved hypothetical 100.0 1.3E-49 4.6E-54 328.1 13.5 124 66-199 5-129 (129)
9 1pnh_A Scorpion toxin; NMR {An 19.4 37 0.0013 21.5 0.9 9 235-243 21-29 (31)
10 4f02_C Eukaryotic translation 15.1 44 0.0015 20.5 0.5 20 67-86 2-21 (27)
No 1
>2p6c_A AQ_2013 protein; NPPSFA, national project on protein structural and functiona analyses, riken structural genomics/proteomics initiative; 2.00A {Aquifex aeolicus}
Probab=100.00 E-value=4.2e-55 Score=363.49 Aligned_cols=134 Identities=28% Similarity=0.465 Sum_probs=128.9
Q ss_pred CeEEEEEEEecCCC-CeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCCC
Q 025199 61 PRWAQKTVTLPPLR-RGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSA 139 (256)
Q Consensus 61 M~~~q~tItV~T~g-rg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~~ 139 (256)
|+++|++|+|+|++ ++++|||++|+++|++ ||+++|+|+||++||||||+|||| ||+|++||+++|+||||++.
T Consensus 1 M~~~~~~i~~~t~~~~~~~dIT~~V~~~v~~--sgi~~Gl~~vf~~HTTasl~inEn-dp~v~~Dl~~~l~~lvP~~~-- 75 (137)
T 2p6c_A 1 MKAYTKYLTFNTKKRRELIRITDEVKKAVEE--SEVKEGLCLVSSMHLTSSVIIQDD-EEGLHEDIWEWLEKLAPYRP-- 75 (137)
T ss_dssp CEEEEEEEEECCSSSSEEEECHHHHHHHHHH--HTCSSEEEEEEESSTTEEEEEECC-CHHHHHHHHHHHHHHSCCCT--
T ss_pred CcEEEEEEEEecCCCCeEEECHHHHHHHHHH--cCCCceEEEEEeCCCeEEEEEEcC-CccHHHHHHHHHHHHCCCCC--
Confidence 88999999999986 7999999999999998 999999999999999999999999 99999999999999999974
Q ss_pred CceeCccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCCceEEEEEEe
Q 025199 140 SWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 199 (256)
Q Consensus 140 ~Y~H~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR~RkV~v~~i 199 (256)
+|+|++||+|||+|||||+|+|+|++|||.||+|.|||||+|||+||||||.|+|++-++
T Consensus 76 ~y~H~~eg~dn~~AHiks~l~G~s~tipv~~G~L~LGtWQ~Iyl~E~dg~r~R~v~v~i~ 135 (137)
T 2p6c_A 76 DYKHHRTGEDNGDAHLKNLLTHLQVVLPITNGKLDLGPWQEIFYAEFDGQRPKRVVIKII 135 (137)
T ss_dssp TCGGGGGTCCCHHHHHHHHHHCSEEEEEECSSSBCCCSSCEEEEEESSCSSCEEEEEEEE
T ss_pred CcccCcCCCCCHHHhhhhheeCCeEEEEEECCEECcCCCceEEEEECCCCCccEEEEEEe
Confidence 699999999999999999999999999999999999999999999999999999887655
No 2
>1vmj_A Hypothetical protein TM0723; putative thiamin phosphate synthase, structural genomics, JO center for structural genomics, JCSG; 1.52A {Thermotoga maritima} SCOP: d.273.1.1
Probab=100.00 E-value=1.9e-53 Score=359.23 Aligned_cols=137 Identities=28% Similarity=0.472 Sum_probs=128.8
Q ss_pred CCeEEEEEEEecCC-CCeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCC
Q 025199 60 NPRWAQKTVTLPPL-RRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRS 138 (256)
Q Consensus 60 ~M~~~q~tItV~T~-grg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~ 138 (256)
-|+-|+++|+|+|. +++++|||++|+++|++ ||+++|+|+||++||||||+|||| ||+|++||+++|+||||++..
T Consensus 12 ~~~~~~~~l~v~T~~~~~~~dIT~~V~~~v~~--sgi~~Gl~~vf~~HTTAsltInEn-dp~v~~Dl~~~l~rlvP~~~~ 88 (151)
T 1vmj_A 12 HMKSYRKELWFHTKRRREFINITPLLEECVRE--SGIKEGLLLCNAMHITASVFINDD-EPGLHHDFEVWLEKLAPEKPY 88 (151)
T ss_dssp -CEEEEEEEEECCSSSSEEEECHHHHHHHHHH--HCCSSEEEEEEESSTTEEEEEECC-CHHHHHHHHHHHHHHSCCCCG
T ss_pred hhhceEEEEEEECCCCCeEEEChHHHHHHHHH--cCCcccEEEEEeCCCcEEEEEEcC-CccHHHHHHHHHHHhCCCCCC
Confidence 48999999999996 57999999999999998 999999999999999999999999 999999999999999998731
Q ss_pred CCceeCccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCCceEEEEEEe
Q 025199 139 ASWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 199 (256)
Q Consensus 139 ~~Y~H~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR~RkV~v~~i 199 (256)
..|+|++||+|||+|||||+|+|+|++|||.||+|.|||||+|||+||||||.|+|++-++
T Consensus 89 ~~y~H~~eg~dn~~AHiKssL~G~S~tiPV~~GrL~LGtWQgIyl~E~dg~r~R~V~v~i~ 149 (151)
T 1vmj_A 89 SQYKHNDTGEDNADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFDGMRPKRVLVKII 149 (151)
T ss_dssp GGCGGGTTSCCCHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESSCSSCEEEEEEEE
T ss_pred CCcEecCcCCCchHhhhhhhhcCCeEEEEEECCEECcCCCcEEEEEECCCCCeeEEEEEEe
Confidence 1699999999999999999999999999999999999999999999999999999887655
No 3
>2p6h_A Hypothetical protein; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.95A {Aeropyrum pernix}
Probab=100.00 E-value=4.4e-53 Score=350.24 Aligned_cols=130 Identities=25% Similarity=0.450 Sum_probs=124.4
Q ss_pred EEEEEEecCCC-CeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCCCCce
Q 025199 64 AQKTVTLPPLR-RGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWK 142 (256)
Q Consensus 64 ~q~tItV~T~g-rg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~~~Y~ 142 (256)
+|++|+|+|++ ++++|||++|+++|++ ||+++|+|+||++||||||+|||| ||+|++||+++|+||||++. +|+
T Consensus 2 ~~~~i~~~t~~r~~~~dIT~~V~~~v~~--sgi~~Gl~~vf~~HTTasltinEn-dp~v~~Dl~~~l~~lvP~~~--~y~ 76 (134)
T 2p6h_A 2 ETGSFTVKTERRLQVLDVTGKVEEWLST--VGGVNGLLVVYVPHTTAAVAVNEA-EPRLMEDIVEFIRELTKPGG--PWK 76 (134)
T ss_dssp EEEEEEEECCSSSEEEECHHHHHHHHHT--TTCCSEEEEEECCCSSEEEEEECC-CHHHHHHHHHHHHHHHCTTS--SCG
T ss_pred eEEEEEEecCCCCeEEECHHHHHHHHHH--cCCCceEEEEEeCCCeEEEEEEcC-CccHHHHHHHHHHHhCCCCC--Ccc
Confidence 78999999987 4999999999999998 999999999999999999999999 99999999999999999874 699
Q ss_pred eCccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCCceEEEEEEe
Q 025199 143 HTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 199 (256)
Q Consensus 143 H~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR~RkV~v~~i 199 (256)
|++| +|||+|||||+|+|+|++|||.||+|.|||||+|||+||||||.|+|++-++
T Consensus 77 H~~e-~dn~~AHiks~l~G~s~tipv~~G~L~LGtWQ~Iyl~E~dg~r~R~v~v~i~ 132 (134)
T 2p6h_A 77 HNLV-DVNAHAHLGNTIIGDSRVIPVVGGRLSLGTWQRILFVEMDGPRERTVNLLYL 132 (134)
T ss_dssp GGGT-CSCHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESSCSCEEEEEEEEE
T ss_pred ccCc-CCCHHHhhhhhhcCCeEEEEEECCEECcCCCceEEEEECCCCCceEEEEEEe
Confidence 9999 9999999999999999999999999999999999999999999999887655
No 4
>1ve0_A Hypothetical protein (ST2072); structural genomics, zinc binding protein, metal binding Pro; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=6.8e-53 Score=349.12 Aligned_cols=131 Identities=26% Similarity=0.463 Sum_probs=125.0
Q ss_pred CeEEEEEEEecCCC-CeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCCC
Q 025199 61 PRWAQKTVTLPPLR-RGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSA 139 (256)
Q Consensus 61 M~~~q~tItV~T~g-rg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~~ 139 (256)
|+++|++|+|+|++ ++++|||++|+++|+ |+++|+|+||++||||||+|||| ||+|++||+++|+||||++.
T Consensus 1 M~~~~~~i~~~t~~r~~~~dIT~~V~~~v~----gi~~Gl~~vf~~HTTasl~inEn-dp~v~~Dl~~~l~~lvP~~~-- 73 (134)
T 1ve0_A 1 MKIISKEFTVKTRSRFDSIDITEQVSEAIK----GINNGIAHVIVKHTTCAIIINEA-ESGLMKDFLNWAKKLVPPDG-- 73 (134)
T ss_dssp CEEEEEEEEEECCSSSEEEECHHHHHHHTT----TCSSEEEEEEECCSSEEEEEECC-CHHHHHHHHHHHHHHSCTTS--
T ss_pred CcEEEEEEEEecCCCCeEEEChHHHHHHhc----ccCceEEEEEeCCCcEEEEEECC-CccHHHHHHHHHHHHCCCCC--
Confidence 88999999999986 599999999999996 79999999999999999999999 99999999999999999874
Q ss_pred CceeCccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCCceEEEEEEe
Q 025199 140 SWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 199 (256)
Q Consensus 140 ~Y~H~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR~RkV~v~~i 199 (256)
+|+|++| +|||+|||||+|+|+|++|||.||+|.|||||+|||+||||||.|+|++-++
T Consensus 74 ~y~H~~e-~dn~~AHiks~l~G~s~tipV~~G~L~LGtWQ~Iyl~E~dg~r~R~v~v~i~ 132 (134)
T 1ve0_A 74 EFEHNII-DNNGHAHVISAIIGNSRVVPIIEGKLDLGTWQRIILLEFDGPRTRTVLVKSM 132 (134)
T ss_dssp CCGGGGT-CSCHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESSCSCEEEEEEEEE
T ss_pred CccccCC-CCChHHhhhhhccCCcEEEEEECCEeccCCCcEEEEEECCCCCeeEEEEEEe
Confidence 6999999 9999999999999999999999999999999999999999999999887655
No 5
>1vph_A Hypothetical protein SSO2532; YBJQ-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.76A {Sulfolobus solfataricus} SCOP: d.273.1.1
Probab=100.00 E-value=9.6e-53 Score=354.32 Aligned_cols=134 Identities=25% Similarity=0.468 Sum_probs=126.5
Q ss_pred CCeEEEEEEEecCCC-CeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCC
Q 025199 60 NPRWAQKTVTLPPLR-RGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRS 138 (256)
Q Consensus 60 ~M~~~q~tItV~T~g-rg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~ 138 (256)
-|++|+++|+|+|++ ++++|||++|+++|++ ||+++|+|+||++||||||+|||| ||+|++||+++|+||||++.
T Consensus 12 ~~~~~~~~l~v~T~~~~~~~dIT~~V~~~v~~--sgi~~Gl~~vf~~HTTAsltInEn-Dp~v~~Dl~~~l~rlvP~~~- 87 (149)
T 1vph_A 12 HMKVYFDDIYVSTARQFELVDITDQVEQIVEK--SGIKNGICLIFVAHSTAAIVANEH-ERGLMEDILTKIKEFTEPSR- 87 (149)
T ss_dssp CCEEEEEEEEEEECSSSEEEECHHHHHHHHHH--HCCCSEEEEEEECCSSEEEEEECC-CHHHHHHHHHHHHHHHCTTS-
T ss_pred eeeEEEEEEEEEcCCCCeEEECHHHHHHHHHH--cCCcceEEEEEeCCCcEEEEEECC-CccHHHHHHHHHHHhCCCCC-
Confidence 499999999999987 7999999999999998 999999999999999999999999 99999999999999999874
Q ss_pred CCceeCccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCC-ceEEEEEEe
Q 025199 139 ASWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLR-VKELHGCML 199 (256)
Q Consensus 139 ~~Y~H~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR-~RkV~v~~i 199 (256)
+|+|++| +|||+|||||+|+|+|++|||.||+|.|||||+|||+||||+| .|+|++-++
T Consensus 88 -~y~H~~e-~dn~~AHiKssL~G~S~tiPV~~G~L~LGtWQgIyl~E~dg~r~~R~v~v~i~ 147 (149)
T 1vph_A 88 -SWKHNLI-DDNAHAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELDGPRSERHITVEIL 147 (149)
T ss_dssp -CCGGGGT-CSCHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESSCCEEEEEEEEEEE
T ss_pred -CccccCc-CCCHHHhhhhhhcCCeEEEEEECCEECcCCCcEEEEEECCCCCCCeEEEEEEe
Confidence 6999988 9999999999999999999999999999999999999999998 577665543
No 6
>1vmh_A Uncharacterized conserved protein YJBQ/UPF0047 FA ortholog YUGU B.subtilis; YJBQ-like fold, structural genomics; 1.31A {Clostridium acetobutylicum} SCOP: d.273.1.1 PDB: 1xbf_A
Probab=100.00 E-value=2.5e-51 Score=344.10 Aligned_cols=128 Identities=33% Similarity=0.498 Sum_probs=120.8
Q ss_pred EEEEEecCCC-CeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCCCCcee
Q 025199 65 QKTVTLPPLR-RGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWKH 143 (256)
Q Consensus 65 q~tItV~T~g-rg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~~~Y~H 143 (256)
-++|+|+|.+ ++++|||++|+++|++ ||+++|+|+||++||||||+||||+||+|++||+++|+||||++. +|+|
T Consensus 16 ~~~l~v~T~~~~~~~dIT~~V~~~v~~--sgi~~Gl~~vf~~HTTAsltInEnaDp~v~~Dl~~~l~rlvP~~~--~y~H 91 (144)
T 1vmh_A 16 VIEYSLKTSNDDQFIDITNLVKKAVDE--SGVSDGMAVVFCPHTTAGITINENADPDVTRDILVNLDKVFPKVG--DYKH 91 (144)
T ss_dssp -CEEEEECCSSSEEEECHHHHHHHHHH--HCCSSEEEEEECCCTTEEEEEEECSCHHHHHHHHHHHHHHSCSSS--SCCC
T ss_pred cEEEEEEcCCCCeEEECHHHHHHHHHH--cCCcceEEEEEeCCCcEEEEEeecCCcCHHHHHHHHHHHhCCCCC--Cccc
Confidence 3589999985 7999999999999998 999999999999999999999999999999999999999999874 6999
Q ss_pred CccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCCceEEEEEEe
Q 025199 144 TLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 199 (256)
Q Consensus 144 ~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR~RkV~v~~i 199 (256)
+ +|||+|||||+|+|+|++|||.||+|.|||||+|||+||||||.|+|++-++
T Consensus 92 ~---~dn~~AHikssL~G~S~tiPV~~GrL~LGtWQgIyl~E~dgpr~R~v~v~i~ 144 (144)
T 1vmh_A 92 V---EGNSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEFDGPRDRKVFVKII 144 (144)
T ss_dssp T---TSCHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESSCSCEEEEEEEEC
T ss_pred C---CCCchHHHHHHhhCCeEEEEEECCEECcCCCcEEEEEECCCCceeEEEEEEC
Confidence 7 7899999999999999999999999999999999999999999999988653
No 7
>1vmf_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, unknown function; HET: EPE; 1.46A {Bacillus halodurans} SCOP: d.273.1.1
Probab=100.00 E-value=1.1e-50 Score=340.42 Aligned_cols=130 Identities=33% Similarity=0.481 Sum_probs=120.4
Q ss_pred EEEEEEecCCC-CeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCCCCCCce
Q 025199 64 AQKTVTLPPLR-RGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWK 142 (256)
Q Consensus 64 ~q~tItV~T~g-rg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~~~~~Y~ 142 (256)
..++|+|.|.+ ++++|||++|+++|++ ||+++|+|+||++||||||+||||+||+|++||+++|+||||++. .+|+
T Consensus 12 ~~~~l~~~t~~~~~~~dIT~~V~~~v~~--sgi~~Gl~~vf~~HTTAsltInEnaDp~v~~Dl~~~l~rlvP~~~-~~y~ 88 (145)
T 1vmf_A 12 HMKTFHLTTQSRDEMVDITSQIETWIRE--TGVTNGVAIVSSLHTTAGITVNENADPDVKRDMIMRLDEVYPWHH-ENDR 88 (145)
T ss_dssp CEEEEEECCCSSSEEEECHHHHHHHHHH--HTCCSEEEEEEESCSSEEEEEEESSCHHHHHHHHHHHHHHSCSCC-TTCC
T ss_pred ceeEEEEEcCCCCeEEECHHHHHHHHHH--cCCcceEEEEEeCCCcEEEEEeecCCcCHHHHHHHHHHHhcCCCC-CCcC
Confidence 35799999975 7999999999999998 999999999999999999999999999999999999999999874 2699
Q ss_pred eCccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCC-ceEEEEEEe
Q 025199 143 HTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLR-VKELHGCML 199 (256)
Q Consensus 143 H~~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR-~RkV~v~~i 199 (256)
| .|| ||+|||||+|+|+|++|||.||+|.|||||+|||+|||||| .|+|++-++
T Consensus 89 H-~EG--n~~AHiKssL~G~S~tiPV~~GrL~LGtWQgIyl~E~dgpr~~R~v~v~i~ 143 (145)
T 1vmf_A 89 H-MEG--NTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLL 143 (145)
T ss_dssp C-TTS--CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESSCCCSCEEEEEEEE
T ss_pred c-CCC--CHHHHHHHHhhCCeEEEEEECCEEccCCCceEEEEECcCCCCCcEEEEEEe
Confidence 9 455 89999999999999999999999999999999999999999 788776654
No 8
>2cu5_A Conserved hypothetical protein TT1486; thermus thermophilus HB8, ST genomics, riken structural genomics/proteomics initiative; 1.84A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-49 Score=328.09 Aligned_cols=124 Identities=32% Similarity=0.516 Sum_probs=114.5
Q ss_pred EEEEecCCCCeEEeCcHHHHHHHhhhhcCCccceEEEEeccceEEEEEeccCCcchHHHHHHHHhhhCCCC-CCCCceeC
Q 025199 66 KTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEG-RSASWKHT 144 (256)
Q Consensus 66 ~tItV~T~grg~~DIT~eV~~~V~~~~SgIknGlv~Vfv~HTTAsLtInEnaDP~v~~DL~~~LerLVP~~-~~~~Y~H~ 144 (256)
.+|+|++++++++|||++|+++|+ . ++|+|+||++||||||+||||+||+|++||+++|+||+|++ . +|+|
T Consensus 5 ~~i~~~~~~~~~~dIT~~V~~~v~---~--~~Gl~~vf~~HTTasltinEnadp~v~~Dl~~~l~~lvP~~~~--~y~H- 76 (129)
T 2cu5_A 5 VRLEVPTPEEGFVNITRKVEAALS---G--HTGLVYLFVPHTTCGLTVQEGADPTVAQDLLGRLAELAPRHRP--QDRH- 76 (129)
T ss_dssp EEEEEEECSSEEEECHHHHHHTST---T--CCEEEEEECCCSSEEEEEECCSSHHHHHHHHHHHHHHSCSCCT--TCCC-
T ss_pred EEEEEeCCCCeEEECHHHHHHHhh---h--cCcEEEEEeCCCcEEEEEeecCCcCHHHHHHHHHHHhCCCCCC--CcCc-
Confidence 357788666899999999999996 2 99999999999999999999999999999999999999987 4 5999
Q ss_pred ccCCCCchhhhhhhccCceEEEEeeCCeecccCcceEEEEecCCCCceEEEEEEe
Q 025199 145 LEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 199 (256)
Q Consensus 145 ~eG~dN~~AHLKSsLlG~SlTVPV~dGkL~LGTWQgIyL~EfDgpR~RkV~v~~i 199 (256)
.|| ||+||+||+|+|+|++|||.||+|.|||||+|||+||||||.|+|++-++
T Consensus 77 ~eG--n~~AHiks~L~G~s~tiPV~~G~L~LGtWQ~Iyl~E~dg~r~R~v~v~i~ 129 (129)
T 2cu5_A 77 LEG--NSHAHLKSLLTGVHLLLLAEKGRLRLGRWQQVFLAEFDGPRVREVWVRLL 129 (129)
T ss_dssp TTS--CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESSCSEEEEEEEEEC
T ss_pred CCC--CHHHHHHHHhhCCeEEEEEECCEECcCCCcEEEEEECCCCceeEEEEEEC
Confidence 455 89999999999999999999999999999999999999999999987653
No 9
>1pnh_A Scorpion toxin; NMR {Androctonus mauretanicus mauretanicus} SCOP: g.3.7.2 PDB: 1scy_A 2ky3_A
Probab=19.37 E-value=37 Score=21.52 Aligned_cols=9 Identities=44% Similarity=0.911 Sum_probs=7.3
Q ss_pred EecCeeeee
Q 025199 235 QIGDECFCS 243 (256)
Q Consensus 235 ~~~~~~~~~ 243 (256)
-|||+|.|-
T Consensus 21 cig~~c~cv 29 (31)
T 1pnh_A 21 CIGVKCECV 29 (31)
T ss_dssp EETTEEEEE
T ss_pred hhCCeeEee
Confidence 489999984
No 10
>4f02_C Eukaryotic translation initiation factor 4 gamma; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens}
Probab=15.12 E-value=44 Score=20.53 Aligned_cols=20 Identities=25% Similarity=0.338 Sum_probs=14.7
Q ss_pred EEEecCCCCeEEeCcHHHHH
Q 025199 67 TVTLPPLRRGCHLITPKIVK 86 (256)
Q Consensus 67 tItV~T~grg~~DIT~eV~~ 86 (256)
+|.++-...|=-|||++|..
T Consensus 2 ~irirdpnqggkditeeims 21 (27)
T 4f02_C 2 TIRIRDPNQGGKDITEEIMS 21 (27)
T ss_pred cceecCccccchhhHHHHHh
Confidence 56677655678899998764
Done!