BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025200
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q819W8|RBGA_BACCR Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=rbgA PE=3 SV=1
Length = 296
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 141/257 (54%), Gaps = 3/257 (1%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM W YF ++G I
Sbjct: 24 IDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADMADDRLTKQWIAYFKEKGHMAI 83
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 120
N Q G G +++ K L + K +KG+ PRA+RA IVG PNVGKS+LIN+L K+
Sbjct: 84 SINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIRALIVGIPNVGKSTLINKLAKK 143
Query: 121 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 180
+ RPGVT +W++ GK++E LD+PGI+ + DQ ++LA I + ++
Sbjct: 144 NIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFEDQLVGLRLATTGAIKDSILNLQ 203
Query: 181 DVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALHLFNG---DTHQAAFRI 237
DVA ++ + + + N +I D + K L G D + + +
Sbjct: 204 DVAVYALRFMEKHYPERLKERYNLNEIPEDIVELFDAIGKNRGCLMGGGMIDYDKTSELV 263
Query: 238 LTDFRKGKFGWISLERP 254
L + R GK G ++ E P
Sbjct: 264 LRELRGGKLGKMTFETP 280
>sp|C5D8U8|RBGA_GEOSW Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70)
GN=rbgA PE=3 SV=1
Length = 283
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 142/262 (54%), Gaps = 12/262 (4%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIPLS+ +P++ + LGN+ RI++LN+ DM W YF +Q +
Sbjct: 26 IDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADMADETVTEQWIAYFERQQLHAL 85
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAVRAGIVGYPNVGKSSLINRLLK 119
+ Q G G ++ AK + D K +KG+ PR +RA IVG PNVGKS+LINRL
Sbjct: 86 AIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPMRALIVGIPNVGKSTLINRLAG 145
Query: 120 RRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDV 179
R + +PGVT+ +W++ GK++E LD+PGI+ + D+ +KLA I + ++
Sbjct: 146 RNIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFEDEEVGLKLATTGAIKDTILNL 205
Query: 180 ADVAAILVQMLAR-IPTVGITALQNRYKI-DMDGTCGKTF--VQKLALHLFNG---DTHQ 232
DVA + L + P L+ RY + D+ G F + K L +G D +
Sbjct: 206 QDVAVYALNFLKQHYP----ERLKERYSLDDIPGEIVALFDAIGKRRGCLVSGGAVDYDK 261
Query: 233 AAFRILTDFRKGKFGWISLERP 254
+ +L D R K G +S E P
Sbjct: 262 VSEIVLHDIRTEKLGRLSFETP 283
>sp|E0TTS5|RBGA_BACPZ Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3
SV=1
Length = 282
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 143/263 (54%), Gaps = 15/263 (5%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D A W +F QG + +
Sbjct: 24 IDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSL 83
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 120
N G G ++ +K + + + R+KG+ PRA+RA I+G PNVGKS+LINRL K+
Sbjct: 84 SINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKK 143
Query: 121 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 180
+ RPG+T +WV+ GK+LE LD+PGI+ + D+ ++LA+ I + ++
Sbjct: 144 NIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQ 203
Query: 181 DVAAILVQMLAR-IPTVGITALQNRYKID--------MDGTCGKTFVQKLALHLFNGDTH 231
DVA ++ L P L+ RY +D + G+ ++ L N D
Sbjct: 204 DVAVFGLRFLEEHYP----ERLKERYALDEIPEDIAELFDAIGEKRGCLMSGGLINYDKT 259
Query: 232 QAAFRILTDFRKGKFGWISLERP 254
I+ D R KFG +S E+P
Sbjct: 260 TEV--IIRDIRTEKFGRLSFEQP 280
>sp|O31743|RBGA_BACSU Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168)
GN=rbgA PE=1 SV=1
Length = 282
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 143/263 (54%), Gaps = 15/263 (5%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D A W +F QG + +
Sbjct: 24 IDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSL 83
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 120
N G G ++ +K + + + R+KG+ PRA+RA I+G PNVGKS+LINRL K+
Sbjct: 84 SINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKK 143
Query: 121 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 180
+ RPG+T +WV+ GK+LE LD+PGI+ + D+ ++LA+ I + ++
Sbjct: 144 NIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQ 203
Query: 181 DVAAILVQMLAR-IPTVGITALQNRYKID--------MDGTCGKTFVQKLALHLFNGDTH 231
DVA ++ L P L+ RY +D + G+ ++ L N D
Sbjct: 204 DVAVFGLRFLEEHYP----ERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYDKT 259
Query: 232 QAAFRILTDFRKGKFGWISLERP 254
I+ D R KFG +S E+P
Sbjct: 260 TEV--IIRDIRTEKFGRLSFEQP 280
>sp|Q65JP4|RBGA_BACLD Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=rbgA PE=3 SV=1
Length = 283
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 141/263 (53%), Gaps = 15/263 (5%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D + AW +F K G +
Sbjct: 24 IDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADSSVTKAWKQHFEKDGIPTL 83
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 120
N G G ++ +K L + K ++KG+ PRA+RA IVG PNVGKS+LINRL K+
Sbjct: 84 AINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIRALIVGIPNVGKSTLINRLAKK 143
Query: 121 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 180
+ RPGVT +WV+ GK+LE LD+PGI+ + D+ ++LA I + ++
Sbjct: 144 NIAKTGDRPGVTTAQQWVKVGKELELLDTPGILWPKFEDELVGLRLAATGAIKDSIINLQ 203
Query: 181 DVAAILVQMLAR-IPTVGITALQNRYKID--------MDGTCGKTFVQKLALHLFNGDTH 231
DVA ++ L P L+ RY ++ + GK +A N D
Sbjct: 204 DVAVYGLRFLEENYP----ERLKKRYDLEEIPEEIAALFDEIGKKRGCLMAGGEINYDKT 259
Query: 232 QAAFRILTDFRKGKFGWISLERP 254
I+ D R KFG +S E+P
Sbjct: 260 TEV--IIRDIRTEKFGPLSFEKP 280
>sp|A8FD69|RBGA_BACP2 Ribosome biogenesis GTPase A OS=Bacillus pumilus (strain SAFR-032)
GN=rbgA PE=3 SV=1
Length = 282
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 140/268 (52%), Gaps = 25/268 (9%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIP+S+ +P++++ L N+ +I++LN+ D W +F +QG + +
Sbjct: 24 IDIVFELTDARIPMSSRNPMIEEILQNKPKIMLLNKADKADPRVTKEWQAHFEQQGVRSL 83
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 120
N G G ++ +K + + + ++KG+ PRA+RA I+G PNVGKS+LINRL K+
Sbjct: 84 AINSVDGQGLNQIITTSKEILKEKFDRMKAKGVKPRAIRALIIGIPNVGKSTLINRLAKK 143
Query: 121 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 180
+ RPG+T +WV+ GK++E LD+PGI+ + D+ ++LA+ I + ++
Sbjct: 144 NIAKTGDRPGITTSQQWVKVGKEMELLDTPGILWPKFEDEKVGLRLAVTGAIKDSIINLQ 203
Query: 181 DVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALHLFNG------------ 228
DVA G+ L+ Y + T + + LF+
Sbjct: 204 DVAV-----------YGLRFLEENYPERLKKRYDLTDIPEDTAELFDAIGTKRGCLMSGG 252
Query: 229 --DTHQAAFRILTDFRKGKFGWISLERP 254
+ + I+ D R KFG ++ E+P
Sbjct: 253 FINYDKTTEIIIRDIRTEKFGPLTFEKP 280
>sp|B7GGD6|RBGA_ANOFW Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=rbgA PE=3 SV=1
Length = 284
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 139/260 (53%), Gaps = 10/260 (3%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIP+S+ +PL+D+ + N+ RI++LN+ DM W +FA Q I
Sbjct: 27 IDIVFELVDARIPMSSRNPLIDEIVANKPRIILLNKADMADPDVTKQWVDFFAAQQIDAI 86
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAVRAGIVGYPNVGKSSLINRLLK 119
+ Q G G ++ +AK K +KG+ PRA+RA IVG PNVGKS+LINRL
Sbjct: 87 AIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPRAMRALIVGIPNVGKSTLINRLAG 146
Query: 120 RRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDV 179
+ + PGVT+ +W++ GK+LE LD+PGI+ + D+ KLA I + ++
Sbjct: 147 KHIAKTGDTPGVTKAQQWIKVGKELELLDTPGILWPKFEDEEVGYKLATTGAIKDTILNL 206
Query: 180 ADVAAILVQMLARIPTVGITALQNRYKI-DMDGTCGKTF--VQKLALHLFNG---DTHQA 233
DVA ++ LA L+ RY + D+ + F + K L G D +
Sbjct: 207 QDVAVYALRFLAAYYP---DRLKERYALADIPEDIVQLFDDIGKKRGCLAAGGVVDYDKV 263
Query: 234 AFRILTDFRKGKFGWISLER 253
A +L D R K G +S +R
Sbjct: 264 AELVLRDIRTEKLGRLSFDR 283
>sp|D5DJL5|RBGA_BACMD Ribosome biogenesis GTPase A OS=Bacillus megaterium (strain DSM
319) GN=rbgA PE=3 SV=1
Length = 288
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 6/210 (2%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D+V E+ DARIP S+ +P++D+ + N+ RI++LN+ D W Y+ +QG +
Sbjct: 24 IDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVDKADPRVTQQWLDYYKEQGIYAL 83
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAVRAGIVGYPNVGKSSLINRLLK 119
+ Q G G ++ +K L + + R+KG+ PRA+RA IVG PNVGKS+LINRL
Sbjct: 84 AIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAIRAMIVGIPNVGKSTLINRLAS 143
Query: 120 RRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDV 179
+++ RPGVT+ +W++ G +LE LD+PGI+ + D+ KLA I + ++
Sbjct: 144 KKIAKTGDRPGVTQAQQWIKVGNELELLDTPGILWPKFEDETVGYKLATTGAIKDTILNM 203
Query: 180 ADVAAILVQML-ARIPTVGITALQNRYKID 208
DVA ++ L + P L+ RY ++
Sbjct: 204 QDVAVYALRFLTSHYP----EQLKQRYNLN 229
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 37/264 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGN----RKRILVLNREDMISMADRNAWATYFAKQGT 57
DV+I+V DAR P+ T ++++L N + ILVLN+ D++ + AW AK+
Sbjct: 218 DVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSVAAAWVKILAKEYP 277
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F N G G++ ++ R +L SD + + G++G+PN GKSS+
Sbjct: 278 TIAFHASINNSFGKGSLIQILRQFASLHSD-----------KKQISVGLIGFPNAGKSSI 326
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L K+++C AP PG T+V ++V K + +D PGI+P +D A + L
Sbjct: 327 INTLRKKKVCNVAPIPGETKVWQYVALMKRIFLIDCPGIVPPSSNDSDAELLLKGV---- 382
Query: 174 ERSYDVADVAAILVQMLARIPTVGITALQNRYKID--MDGTCGKTFVQKLAL---HLFNG 228
R +V++ A + +L+R + L+ Y+I D T F+ KLA L G
Sbjct: 383 VRVENVSNPEAYIPTVLSR---CKVKHLERTYEISGWNDST---EFLAKLAKKGGRLLKG 436
Query: 229 ---DTHQAAFRILTDFRKGKFGWI 249
D A +L DF +GK W
Sbjct: 437 GEPDEASVAKMVLNDFMRGKIPWF 460
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVV+EV DAR PL T +++ + GN++ +LVLN+ D++ + N W YF + G
Sbjct: 152 DVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGP 211
Query: 58 KVIF------SNGQLGMGTMKLSRLAKALASDVNVKR-----------RSKGLLPRAVRA 100
F +LG ++ + KA+ V + R+KG+ ++R
Sbjct: 212 VTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSMLGNYCRNKGI-KTSIRV 270
Query: 101 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 160
G+VG PNVGKSS+IN L + R C PGVT+ ++ V ++ +D PGI+ +
Sbjct: 271 GVVGIPNVGKSSIINSLTRGRSCMVGSTPGVTKSMQEVELDSKIKLIDCPGIVFTSGGEN 330
Query: 161 AAAIKLAICDDIGERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQK 220
+ A+ L +G DV D I +L R + Y I T + F +K
Sbjct: 331 SHAV-LKNAQRVG----DVKDPFTIAESVLKRASKEYFCTM---YDITNYDTFEEFFAKK 382
Query: 221 LA---LHLFNG--DTHQAAFRILTDFRKGKFGWISLERPP 255
A L G D AA +L D+ GK + + +PP
Sbjct: 383 AARMGKFLKKGVPDVVAAARSVLNDWNTGKIKYCT--QPP 420
>sp|Q9WZM6|RBGA_THEMA Ribosome biogenesis GTPase A OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=rbgA PE=1 SV=1
Length = 262
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 31/256 (12%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
++ V+EVRDAR P +T+ +D ++ I++LN+ D+ W +F KQG +VI
Sbjct: 22 VNTVVEVRDARAPFATSAYGVD--FSRKETIILLNKVDIADEKTTKKWVEFFKKQGKRVI 79
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 120
++ K V +K+ S R R IVG PN GKS++IN+L +
Sbjct: 80 TTH--------------KGEPRKVLLKKLS---FDRLARVLIVGVPNTGKSTIINKLKGK 122
Query: 121 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 180
R +PG+T+ ++W ++ LD+PGI+ I + A KL + + +
Sbjct: 123 RASSVGAQPGITKGIQWFSLENGVKILDTPGILYKNIFSEDLAAKLLLVGSLPVERIEDQ 182
Query: 181 DVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALHLFNG--DTHQAAFRIL 238
+ ++ AR ++GI + + + D F +K L G D +A
Sbjct: 183 RIFERAFEIFAR--SIGIESSFSEFFED--------FARKRGLLKKGGVPDIERALMLFF 232
Query: 239 TDFRKGKFGWISLERP 254
T+ +GK G +S ERP
Sbjct: 233 TEVAQGKAGRVSFERP 248
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T ++Q++ ++ I VLN+ D++ AW + ++
Sbjct: 215 DVVIHVLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLVPTWVAAAWVKHLSQDYP 274
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G++ +L R AL D + + G +GYPN GKSS+
Sbjct: 275 TLAFHASITNSFGKGSLIQLLRQYSALHPDR-----------QQISVGFIGYPNTGKSSI 323
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L K+++C AP PG T+V +++ K + +D PGI+P D I +
Sbjct: 324 INTLRKKKVCKTAPIPGETKVWQYITLMKRIFLIDCPGIVPPSQKDSETDILFRGVVRVE 383
Query: 174 ERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLAL---HLFNG-- 228
SY + A+L + + L+ Y++ + F++K+A L G
Sbjct: 384 HVSYPEQYIPALLERCETK-------HLERTYEVS-GWSNATEFLEKIARKHGRLLKGGE 435
Query: 229 -DTHQAAFRILTDFRKGKFGWI 249
D A IL DF +GK W
Sbjct: 436 PDESGIAKLILNDFNRGKIPWF 457
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGNRK----RILVLNREDMISMADRNAWATYFAKQGT 57
DV+I++ DAR PL T ++++L K IL+LN+ D+I W +K+
Sbjct: 200 DVIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPTWCTREWIKQLSKEYP 259
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F N G G++ +L R L S+ R + G +GYPN GKSS+
Sbjct: 260 TLAFHASINNPFGKGSLIQLLRQFSKLHSNR-----------RQISVGFIGYPNTGKSSV 308
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L +++C AP PG T+V ++VR + +D PGI+P +D I + I
Sbjct: 309 INTLRSKKVCNTAPIPGETKVWQYVRMTSKIFMIDCPGIVPPNSNDSETEIIIKGALRIE 368
Query: 174 ERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLAL---HLFNG-- 228
+ S + AIL + L+ Y+I F++ LA L G
Sbjct: 369 KVSNPEQYIHAILNLCETK-------HLERTYQISGWENDSTKFIELLARKTGKLLKGGE 421
Query: 229 -DTHQAAFRILTDFRKGKFGWI 249
D A ++ DF +GK W
Sbjct: 422 VDESSIAKMVINDFIRGKIPWF 443
>sp|Q21086|GNL3_CAEEL Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis
elegans GN=nst-1 PE=3 SV=1
Length = 556
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 32/277 (11%)
Query: 2 DVVIEVRDARIPL-STTHPLMDQWL-GNRKRILVLNREDMISMADRNAWATYFAKQGTKV 59
DV+I+V DAR PL S + + DQ L G ++ +L+LN+ D++ + W Y Q +
Sbjct: 149 DVIIQVLDARDPLGSRSKSVEDQVLKGGKRLVLLLNKIDLVPRENVQKWLEYLRGQFPTI 208
Query: 60 IF--------SN-GQLGMGTMKLSRLAKALASDVNVK-----RRSKGLLPRAVRAGIVGY 105
F SN G+ + + +K + +D+ +K R+K + ++R G+VG+
Sbjct: 209 AFKASTQEQKSNIGRFNSAILNNTETSKCVGADIVMKILANYCRNKDI-KTSIRVGVVGF 267
Query: 106 PNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIK 165
PNVGKSS+IN L +R+ C PG+T+ ++ V K++ +DSPG+I + D I+
Sbjct: 268 PNVGKSSVINSLKRRKACNVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKD-LDPIE 326
Query: 166 LAICDDIGERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALHL 225
+A+ + I R ++ D A + +L R I N D F+ +LA +
Sbjct: 327 VALKNAI--RVDNLLDPIAPVHAILRRCSKETIMLHYNL----ADFNSVDQFLAQLARRI 380
Query: 226 ------FNGDTHQAAFRILTDFRKGKFGWISLERPPR 256
D + AA R+L D+ GK + + PP
Sbjct: 381 GKLRRGARPDVNAAAKRVLNDWNTGKLRYYT--HPPE 415
>sp|P75135|RBGA_MYCPN Probable ribosome biogenesis GTPase A OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=rbgA PE=1 SV=1
Length = 271
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 39/265 (14%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI-SMADRNA-WATYFAKQGTK 58
+D VIEV DAR P T +P + + N+ ++ + + D+ ++A+ N W T KQG
Sbjct: 31 LDGVIEVVDARAPTLTQNPEITAYFTNKPKLTLALKADLAQTVANSNILWGTL--KQG-- 86
Query: 59 VIFSNGQLGMGTMKLSRLA-KALASDVNVKR---RSKGLLPRAVRAGIVGYPNVGKSSLI 114
++L RL K L + K+ ++KGLL R ++G PNVGKSSLI
Sbjct: 87 ------------LQLKRLVIKKLQTLFQAKKNQLKAKGLLVHQFRLAVIGMPNVGKSSLI 134
Query: 115 NRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGE 174
N LL + A R GVT+ + W + + D+PG+ RI + A KL + + I
Sbjct: 135 NLLLNKNHLQVANRAGVTKSMSWNQISSEFYLSDTPGVFFKRIDEMAVGYKLVLTNVIKR 194
Query: 175 RSYDVADVAAILVQMLAR-IPTVGITALQNRYKIDMDGTCGKTFVQKLA-----LHLFNG 228
+ DV A L++ P + + +GT F+ K A L N
Sbjct: 195 EVVPLEDVGAFAFCYLSKHYPQL----------LPYEGTDFTEFLHKFAISRKLLQKSNQ 244
Query: 229 -DTHQAAFRILTDFRKGKFGWISLE 252
+ + A +++ GK+G +S E
Sbjct: 245 LNINLACELFVSELINGKYGKLSFE 269
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 39/271 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T +++++ ++ I VLN+ D++ AW + +K
Sbjct: 223 DVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKDRP 282
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G++ +L R L +D + + G +GYPN GKSS+
Sbjct: 283 TLAFHASITNSFGKGSLIQLLRQFSQLHTDR-----------KQISVGFIGYPNTGKSSI 331
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L K+++C AP PG T+V +++ K + +D PGI+P D I +
Sbjct: 332 INTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSTKDSEEDILFRGVVRVE 391
Query: 174 ERSYDVADVAAILVQMLARIPTVGITALQNRYKID--MDGTCGKTFVQKLAL---HLFNG 228
S+ + +L + + L+ Y+I D T F++ LA L G
Sbjct: 392 HVSHPEQYIPGVLKRCQTK-------HLERTYEISGWKDAT---DFIEMLARKQGRLLKG 441
Query: 229 ---DTHQAAFRILTDFRKGKFGWISLERPPR 256
D + +IL DF +GK W + PP
Sbjct: 442 GEPDESGVSKQILNDFNRGKIPWFVI--PPE 470
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 37/266 (13%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T +++++ ++ I VLN+ D++ AW + +K+
Sbjct: 223 DVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERP 282
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G++ +L R L +D + + G +GYPN GKSS+
Sbjct: 283 TLAFHASITNSFGKGSLIQLLRQFSQLHTDR-----------KQISVGFIGYPNTGKSSI 331
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L K+++C AP PG T+V +++ K + +D PGI+P D I +
Sbjct: 332 INTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVE 391
Query: 174 ERSYDVADVAAILVQMLARIPTVGITALQNRYKID--MDGTCGKTFVQKLAL---HLFNG 228
++ + +L + + L+ Y+I D T F++ LA L G
Sbjct: 392 HVTHPEQYIPGVLKR-------CQVKHLERTYEISGWKDAT---EFIEILARKQGRLLKG 441
Query: 229 ---DTHQAAFRILTDFRKGKFGWISL 251
D + +IL DF +GK W L
Sbjct: 442 GEPDESGVSKQILNDFNRGKIPWFVL 467
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 37/264 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T +++++ ++ I VLN+ D++ AW + +K
Sbjct: 222 DVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWLAAAWVKHLSKDRP 281
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G++ +L R L D + + G +GYPN GKSS+
Sbjct: 282 TLAFHASITNSFGKGSLIQLLRQFSQLHKDR-----------QQISVGFIGYPNTGKSSI 330
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L K+++C AP PG T+V +++ K + +D PGI+P D I +
Sbjct: 331 INTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSAKDTEEDILFRGVVRVE 390
Query: 174 ERSYDVADVAAILVQMLARIPTVGITALQNRYKID--MDGTCGKTFVQKLAL---HLFNG 228
S+ + A+L + L+ Y+I D T F++ LA L G
Sbjct: 391 HVSHPEQYIPAVLRRCKRH-------HLERTYEISGWADAT---EFIEMLARKQGRLLKG 440
Query: 229 ---DTHQAAFRILTDFRKGKFGWI 249
D A ++L DF +GK W
Sbjct: 441 GEPDETGVAKQVLNDFNRGKIPWF 464
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T + ++L ++ + VLN+ D++ W + +
Sbjct: 236 DVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHLSLSAP 295
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F N G G++ +L R L SD + + G +GYPN GKSS+
Sbjct: 296 TIAFHASINNSFGKGSLIQLLRQFSVLHSD-----------KKQISVGFIGYPNTGKSSI 344
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM--RISDQAAAIKLAICDD 171
IN L K+++C AP PG T+V +++ + + +D PGI+P+ + SD +K +
Sbjct: 345 INTLKKKKVCTVAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVV--- 401
Query: 172 IGERSYDVADVAAILVQMLARI------PTVGITALQNRYKIDMDGTCGKTFVQKLALHL 225
R ++A A + +L R+ T G+ ++ + + T T + K + L
Sbjct: 402 ---RVENLATPAEHIPALLERVRPEYLERTYGLEHVEGGWHGEEGATFVLTAIAKKSGKL 458
Query: 226 FNG---DTHQAAFRILTDFRKGK 245
G D AA +L D+ +GK
Sbjct: 459 LKGGEPDQEAAAKMVLNDWIRGK 481
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T + ++L ++ + VLN+ D++ W + +
Sbjct: 209 DVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHLSLSAP 268
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F N G G++ +L R L SD + + G +GYPN GKSS+
Sbjct: 269 TIAFHASINNSFGKGSLIQLLRQFSVLHSD-----------KKQISVGFIGYPNTGKSSI 317
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM--RISDQAAAIKLAICDD 171
IN L K+++C AP PG T+V +++ + + +D PGI+P+ + SD +K +
Sbjct: 318 INTLKKKKVCTVAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVV--- 374
Query: 172 IGERSYDVADVAAILVQMLARI------PTVGITALQNRYKIDMDGTCGKTFVQKLALHL 225
R ++A A + +L R+ T G+ ++ + + T T + K + L
Sbjct: 375 ---RVENLATPAEHIPALLERVRPEYLERTYGLEHVEGGWHGEEGATFVLTAIAKKSGKL 431
Query: 226 FNG---DTHQAAFRILTDFRKGK 245
G D AA +L D+ +GK
Sbjct: 432 LKGGEPDQEAAAKMVLNDWIRGK 454
>sp|Q9BVP2|GNL3_HUMAN Guanine nucleotide-binding protein-like 3 OS=Homo sapiens GN=GNL3
PE=1 SV=2
Length = 549
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAWATYFAKQGTK 58
DVV+EV DAR PL P +++ + G +K +L+LN+ D++ + +W Y K+
Sbjct: 142 DVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLKKELPT 201
Query: 59 VIFSNGQLGMGTMKLSRLAKA------LASDVNVKRRS--------KGLLPRAVRAGIVG 104
V+F K+++ KA S+V + + +A+R G++G
Sbjct: 202 VVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGVIG 261
Query: 105 YPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 153
+PNVGKSS+IN L + +MC G+TR ++ V K + +DSP I
Sbjct: 262 FPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFI 310
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 41/266 (15%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGN----RKRILVLNREDMISMADRNAWATYFAKQGT 57
DVVI V DAR PL T + ++ N + I VLN+ D++ AW + +K+
Sbjct: 222 DVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKERP 281
Query: 58 KVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G++ +L R L D + + G +GYPN GKSS+
Sbjct: 282 TLAFHASITNSFGKGSLIQLLRQFSQLHKDRH-----------QISVGFIGYPNTGKSSI 330
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 173
IN L K+++C AP PG T+V +++ K + +D PGI+P D I +
Sbjct: 331 INTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVE 390
Query: 174 ERSYDVADVAAILV----QMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLAL---HLF 226
S+ + IL Q L R T I+ +K +D F++ +A L
Sbjct: 391 HVSHPEQYIPGILKRCKRQHLER--TYEISG----WKDSVD------FIEMIARKQGRLL 438
Query: 227 NG---DTHQAAFRILTDFRKGKFGWI 249
G D + +IL DF +GK W
Sbjct: 439 KGGEPDESGVSKQILNDFNRGKIPWF 464
>sp|Q6PGG6|GNL3L_MOUSE Guanine nucleotide-binding protein-like 3-like protein OS=Mus
musculus GN=Gnl3l PE=1 SV=1
Length = 577
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DV++EV DAR PL M++ + GN+K +LVLN+ D++ W Y +
Sbjct: 129 DVILEVLDARDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEIVEKWLEYLLNELP 188
Query: 58 KVIFSNGQLGMGTMKLSRLAKAL--ASDVNVKRRSK----------------GLLPRAVR 99
V F L+R + AS+ +K R+ G + +R
Sbjct: 189 TVAFKASTQHHQVKNLTRCKVPVDQASESLLKSRACFGAENLMRVLGNYCRLGEVRGHIR 248
Query: 100 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 159
G+VG PNVGKSSLIN L + R C PGVT+ ++ V K + LD+PGI+P S+
Sbjct: 249 VGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKFMQEVYLDKFIRLLDAPGIVPGPNSE 308
Query: 160 QAAAIKLAICDDIGERSYDVADVAAILVQM-LARIPT-VGITALQNRYKIDMDGTCGKTF 217
++ C + + + V V IL + L I + G++ Q + F
Sbjct: 309 VGTILR--NCIHVQKLADPVTPVETILQRCNLEEISSYYGVSGFQT----------TEHF 356
Query: 218 VQKLALHLFNG------DTHQAAFRILTDFRKGKFGWISLERP 254
+ +A L QAA +L D+ GK + +L P
Sbjct: 357 LTAVAHRLGKKKKGGVYSQEQAAKAVLADWVSGKISFYTLPPP 399
>sp|A9JTX2|MTG1_XENTR Mitochondrial GTPase 1 OS=Xenopus tropicalis GN=mtg1 PE=2 SV=1
Length = 311
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 40/282 (14%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGT-KV 59
+D ++EV DARIPLS +P+ LG + +L+LN+ D+ + + +QG V
Sbjct: 40 LDCIVEVHDARIPLSGRNPIFQDSLGMKPHLLILNKMDLADLTQKKRILAQLKQQGVGNV 99
Query: 60 IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLIN---- 115
IF++ + + + ++ V +R ++G PNVGKSSLIN
Sbjct: 100 IFTD---CVKDQNIKHVVPVISELVGCSQRFHREENTETCIMVIGVPNVGKSSLINALRR 156
Query: 116 -RLLKRRMCPAAPRPGVTR-VLKWVRFGKD-LEFL-DSPGIIPMRISDQAAAIKLAICDD 171
L K + PG+TR VL ++ + L FL D+PG++ RI +KLA+C
Sbjct: 157 MHLRKGKASRVGAEPGITRSVLTKIQVSESPLIFLFDTPGVLSPRIESVETGMKLALCGT 216
Query: 172 IGERSYDVADVAAILVQMLARIPTVGITALQNRY--KIDMDGTCG--KTFVQKLALHLFN 227
I + +A L+ +L + +Q+RY ++ C +T ++++AL L
Sbjct: 217 ILDHLVGEDIMADYLLYILNQ-------QMQHRYVEHYGLEKPCADIETLLKRIALKLGK 269
Query: 228 ----------GDT-------HQAAFRILTDFRKGKFGWISLE 252
GD + AA+ + FR+G+ G + L+
Sbjct: 270 TQKVKAITGVGDVNITVPNYNAAAYDFIRTFRRGQLGVVMLD 311
>sp|Q9BT17|MTG1_HUMAN Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=1 SV=2
Length = 334
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTK-V 59
+D +IEV DARIPLS +PL + LG + +LVLN+ D+ + ++ + +G K V
Sbjct: 49 VDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLTEQQKIMQHLEGEGLKNV 108
Query: 60 IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLK 119
IF+N ++ + L + R + L ++G PNVGKSSLIN L +
Sbjct: 109 IFTNCVKDENVKQIIPMVTELIGRSHRYHRKENL---EYCIMVIGVPNVGKSSLINSLRR 165
Query: 120 RRM-----CPAAPRPGVTR-VLKWVRFGKD--LEFLDSPGIIPMRISDQAAAIKLAICDD 171
+ + PG+TR V+ ++ + + LD+PG++ RI +KLA+C
Sbjct: 166 QHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGT 225
Query: 172 I 172
+
Sbjct: 226 V 226
>sp|E3TDS3|MTG1_ICTPU Mitochondrial GTPase 1 OS=Ictalurus punctatus GN=mtg1 PE=2 SV=1
Length = 320
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D VIE+ DARIP S +PL + L R +L+LN+ D+ +D+ + + G K +
Sbjct: 47 VDCVIEIHDARIPFSGRNPLFQENLDVRPHLLILNKMDLADTSDKMSILKQLERDGVKNV 106
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLIN----- 115
L + ++ + + R R+ ++G PNVGKSSLIN
Sbjct: 107 LLTDCLKQRDTSVKKIIPLVTDLIENAPRFHREENRSYCLMVIGVPNVGKSSLINAIRRT 166
Query: 116 RLLKRRMCPAAPRPGVTR-VLKWVRFGKD--LEFLDSPGIIPMRISDQAAAIKLAICDDI 172
L K + PG+T+ VL ++ + + LD+PG++P +I + +KLA+C I
Sbjct: 167 NLKKGKASRVGGEPGITKAVLTKIQVCERPVIHLLDTPGVLPPKIENIETGMKLALCGTI 226
Query: 173 GERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALHLFNGDTHQ 232
+ +A L+ L R G RY ++ + ++ +A+ L G T +
Sbjct: 227 LDHLVGEDIIADYLLFSLNRPQRFGYV---ERYDLETPSDDIQHVLKCIAVKL--GKTQR 281
Query: 233 -------------------AAFRILTDFRKGKFGWISLE 252
AA+ + FRKG+ G + L+
Sbjct: 282 VKAITGVGDITVRMPNYTAAAYDFIRAFRKGELGKVMLD 320
>sp|Q3T0J9|GNL3L_BOVIN Guanine nucleotide-binding protein-like 3-like protein OS=Bos
taurus GN=GNL3L PE=2 SV=1
Length = 575
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 43/283 (15%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DV++EV D+R PL M++ + GN+K +LVLN+ D++ W Y +
Sbjct: 129 DVILEVLDSRDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEVVEKWLEYLRNELP 188
Query: 58 KVIF-SNGQLGMGTMKLSRLAKALASDVNVKRRSK----------------GLLPRAVRA 100
V F ++ Q + + + AS+ +K ++ G + +R
Sbjct: 189 TVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRV 248
Query: 101 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 160
G+VG PNVGKSSLIN L + R C PGVT+ ++ V K + LD+PGI+P S+
Sbjct: 249 GVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKFMQEVYLDKFIRLLDAPGIVPGPNSEV 308
Query: 161 AAAIKLAICDDIGERSYDVADVAAILVQM-LARIPT-VGITALQNRYKIDMDGTCGKTFV 218
++ C + + + V V IL + L I + G++ Q + F+
Sbjct: 309 GTILR--NCIHVQKLADPVTPVETILQRCNLEEISSYYGVSGFQT----------TEHFL 356
Query: 219 QKLALHLFNG------DTHQAAFRILTDFRKGKFGWISLERPP 255
+A L QAA +L D+ GK + +L PP
Sbjct: 357 TAVAHRLGKKKKGGIYSQEQAAKAVLADWVSGKISFYTL--PP 397
>sp|Q9NVN8|GNL3L_HUMAN Guanine nucleotide-binding protein-like 3-like protein OS=Homo
sapiens GN=GNL3L PE=1 SV=1
Length = 582
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DV++EV DAR PL M++ + GN+K +LVLN+ D++ W Y +
Sbjct: 136 DVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELP 195
Query: 58 KVIF-SNGQLGMGTMKLSRLAKALASDVNVKRRSK----------------GLLPRAVRA 100
V F ++ Q + + + AS+ +K ++ G + +R
Sbjct: 196 TVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRV 255
Query: 101 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 154
G+VG PNVGKSSLIN L + R C PG+T+ ++ V K + LD+PGI+P
Sbjct: 256 GVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIVP 309
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 48/276 (17%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMI---------SMADRNA- 47
DVVI V DAR PL T + ++L ++ + VLN+ D++ + A N
Sbjct: 234 DVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTSGPYAYAYANGP 293
Query: 48 --WATYFAKQGTKVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAG 101
W + + + F N G G++ +L R L SD + + G
Sbjct: 294 ARWVKHLSLSAPTIAFHASINNSFGKGSLIQLLRQFSVLHSD-----------KKQISVG 342
Query: 102 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM--RISD 159
+GYPN GKSS+IN L K+++C AP PG T+V +++ + + +D PGI+P+ + SD
Sbjct: 343 FIGYPNTGKSSIINTLKKKKVCTVAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSD 402
Query: 160 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI------PTVGITALQNRYKIDMDGTC 213
+K + R ++A A + +L R+ T + ++ + + T
Sbjct: 403 TDTVLKGVV------RVENLATPAEHIPALLERVRPEYLERTYNLEHVEGGWHGEQGATV 456
Query: 214 GKTFVQKLALHLFNG---DTHQAAFRILTDFRKGKF 246
T + K + L G D AA +L D+ +GK
Sbjct: 457 ILTAIAKKSGKLLKGGEPDQEAAAKMVLNDWIRGKI 492
>sp|Q4PS77|MTG1_BOVIN Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2
Length = 332
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 26/276 (9%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTK-V 59
+D +IEV DA+IPLS +PL + LG + +LVLN+ D+ + ++ + ++G K V
Sbjct: 49 VDCIIEVHDAQIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIIQHLEREGIKHV 108
Query: 60 IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLK 119
+F+N ++ L R + + ++G PNVGKSSLIN L +
Sbjct: 109 VFTNCVKDENVKQVIPTVTELVGSSYRYHRGEHV---EYCIMVIGVPNVGKSSLINSLRR 165
Query: 120 RRM-----CPAAPRPGVTR-VLKWVRFGKD--LEFLDSPGIIPMRISDQAAAIKLAICDD 171
+ + PG+TR V+ ++ + + LD+PG++ RI +KLA+C
Sbjct: 166 QHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSVETGLKLALCGT 225
Query: 172 IGERSYDVADVAAILVQMLARIPTVG-------------ITALQNRYKIDMDGTCG-KTF 217
+ + +A L+ L R G I ++ R + + T K
Sbjct: 226 VLDHLVGEETLADFLLYTLNRHQLSGYVQHYGLGEACDDIASVLKRVAVKLRKTQKVKVL 285
Query: 218 VQKLALHLFNGDTHQAAFRILTDFRKGKFGWISLER 253
+++ D AA L FR G G + L+R
Sbjct: 286 TGTGNVNVIQPDYPAAARDFLRAFRSGLLGPVMLDR 321
>sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium
discoideum GN=gnl3 PE=3 SV=1
Length = 615
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 38/185 (20%)
Query: 2 DVVIEVRDARIPLS----TTHPLMDQWLGNRKRILVLNREDMISMAD--------RNAWA 49
DV+++V DAR P+ ++ + N+K +L+LN+ D++ + RN +
Sbjct: 146 DVILQVLDARDPMGCRCLEIEKMILERYTNKKIVLILNKIDLVPRENVLMWLKYLRNFYP 205
Query: 50 TYFAKQGTKVIFSN-GQLG-----------------MGTMKLSRLAKALASDVNVKRRSK 91
T K T+ N GQ G +G +L +L K + +N+K
Sbjct: 206 TLAFKCSTQQQKRNLGQQGGIQPELASNDMLNSTESLGAEQLLQLLKNYSRSLNIKT--- 262
Query: 92 GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPG 151
+V GI+GYPNVGKSSLIN L + R PG T+ + V K+++ LDSPG
Sbjct: 263 -----SVTVGIIGYPNVGKSSLINSLKRTRSVGVGATPGFTKFAQEVHLDKNVKLLDSPG 317
Query: 152 IIPMR 156
I+P++
Sbjct: 318 IVPIK 322
>sp|Q6DRP2|GNL3_DANRE Guanine nucleotide-binding protein-like 3 OS=Danio rerio GN=gnl3
PE=2 SV=1
Length = 561
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 30/178 (16%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGT 57
DV++EV DAR PL P +++ + G +K + +LN+ D++ + W + +
Sbjct: 144 DVIVEVLDARDPLGCRCPQLEEMVLKHEGKKKLLFILNKIDLVPKDNLEKWLHFLEAECP 203
Query: 58 KVIF-SNGQLGMGTMKL-------------SRLAKALA--------SDVNVKRRSKGLLP 95
+F S+ QL T++ SR A +D+ K+ + +L
Sbjct: 204 TFLFKSSMQLKDRTVQQKRQQRGTNAVLDHSRAASCFGKDFLLQTLNDLANKKEGETML- 262
Query: 96 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 153
+ G+VG+PNVGKSS+IN L + R C A + G+TR ++ V K ++ +DSPGI+
Sbjct: 263 ---KVGVVGFPNVGKSSIINSLKEMRACNAGVQRGLTRCMQEVHITKKVKMIDSPGIL 317
>sp|Q58859|Y1464_METJA Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1464 PE=3 SV=1
Length = 373
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 34/262 (12%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGNRKR--ILVLNREDMISMADRNAWATYFAKQGTKV 59
DV++ V DAR P T + +++ + + + I VLN+ D++ W F G
Sbjct: 25 DVILLVLDARDPEMTRNRELEKKIKAKGKKLIYVLNKADLVPKDILEKWKEVF---GENT 81
Query: 60 IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLK 119
+F + + +GT L + +K+ K + + + GIVGYPNVGKSS+IN L
Sbjct: 82 VFVSAKRRLGTKILREM---------IKQSLKEMGKKEGKVGIVGYPNVGKSSIINALTG 132
Query: 120 RRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ---AAAIKLAICDDIGERS 176
+R G+T+ +WVR K+++ +D+PG++ MR D + A++L
Sbjct: 133 KRKALTGSVAGLTKGEQWVRLTKNIKLMDTPGVLEMRDEDDLVISGALRLE--------- 183
Query: 177 YDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLA---LHLFNG---DT 230
V + +++L+RI + ++ + +D + + ++K+ +L G D
Sbjct: 184 -KVENPIPPALKILSRINNFDNSIIKEYFGVDYE-EVDEELLKKIGNKRSYLTKGGEVDL 241
Query: 231 HQAAFRILTDFRKGKFGWISLE 252
+ A I+ +++ GK + ++
Sbjct: 242 VRTAKTIIKEYQDGKLNYYKVD 263
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAWATYFAKQGTK 58
DV++ V DAR P ST +++ + ++ IL+LN+ D+I W Y
Sbjct: 177 DVILYVLDARDPESTRSRKVEEAVLQSQGKRLILILNKVDLIPPHVLEQWLNYLKSSFPT 236
Query: 59 VIF--SNGQLGMGTM--KLSRLAKALASDVNVKRRSKGL-LPRAVRAGIVGYPNVGKSSL 113
+ S+G + + KLS+ A A ++K S L R++ G++GYPNVGKSS+
Sbjct: 237 IPLRASSGAVNGTSFNRKLSQTTTASALLESLKTYSNNSNLKRSIVVGVIGYPNVGKSSV 296
Query: 114 INRLLKRR-----MCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII----PMRISDQAAAI 164
IN LL RR CP GVT L+ ++ L+ LDSPGI + S
Sbjct: 297 INALLARRGGQSKACPVGNEAGVTTSLREIKIDNKLKILDSPGICFPSENKKRSKVEHEA 356
Query: 165 KLAICDDIGERS-YDVADVAAILVQMLARIPTVGITALQNRYKI-DMDGTCGKTFVQKLA 222
+LA+ + + + D +LV+ LA+ + + + Y+I + TF +
Sbjct: 357 ELALLNALPAKHIVDPYPAVLMLVKRLAKSDEM-TESFKKLYEIPPIPANDADTFTKHFL 415
Query: 223 LHLFNG----------DTHQAAFRILTDFRKGK-FGWI 249
+H+ + A +L D+R GK GW+
Sbjct: 416 IHVARKRGRLGKGGIPNLASAGLSVLNDWRDGKILGWV 453
>sp|Q8R2R6|MTG1_MOUSE Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2
Length = 326
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQG-TKV 59
+D VIEV DARIP S +PL + LG + +LVLN+ D+ + ++ ++G + V
Sbjct: 48 VDCVIEVHDARIPFSGRNPLFQELLGLKPHLLVLNKMDLADLTEQQKIVQRLEEKGLSNV 107
Query: 60 IFSNG-------QLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSS 112
+F+N Q+ M+L R + R + P +VG PNVGKSS
Sbjct: 108 LFTNCVKDENIKQIVPKVMELIRCS---------YRYHRAETPEYC-IMVVGVPNVGKSS 157
Query: 113 LINRLLKRRM-----CPAAPRPGVTRVL--KWVRFGKDLEF-LDSPGIIPMRISDQAAAI 164
LIN L ++ + PG+TR + + + L F LD+PG++ RI +
Sbjct: 158 LINSLRRQHLRTGKAARVGGEPGITRAVTSRIQVCERPLVFLLDTPGVLAPRIESVETGL 217
Query: 165 KLAICDDIGERSYDVADVAAILVQMLAR 192
KLA+C + + +A L+ L R
Sbjct: 218 KLALCGTVLDHLVGEETMADYLLYTLNR 245
>sp|Q49435|RBGA_MYCGE Probable ribosome biogenesis GTPase A OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=rbgA PE=3
SV=1
Length = 270
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 60
+D +IE+ DAR P T + + + N+ ++++ + D+ A Y K K++
Sbjct: 30 IDGIIEIVDARAPTLTHNSEIISYFLNKPKLILALKTDL---------AQY--KPNKKIL 78
Query: 61 FSNGQLGMGTMKLSRLAKALASDVNVKR---RSKGLLPRAVRAGIVGYPNVGKSSLINRL 117
F G L ++ K L + KR ++KGLL + R ++G PNVGKSSLIN L
Sbjct: 79 F--GSLKEPFKLKKKVLKTLTTLFANKRQQLKAKGLLIKQFRLAVIGMPNVGKSSLINLL 136
Query: 118 LKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSY 177
+ + A R G+T+ L W++ +L D+PG+ RI + KL + + I
Sbjct: 137 INKNHLKVANRAGITKSLNWIQISPELLLSDTPGVFLKRIDEIQIGYKLVLTNVIRREVV 196
Query: 178 DVADVAAILVQMLAR 192
++ +V L +
Sbjct: 197 NIEEVGMFAFNYLKK 211
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL----GNRKR-ILVLNREDMISMADRNAWATYF---- 52
DV++ V DAR P T +++ + KR I V+N+ D++ N W TY
Sbjct: 164 DVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEVLNKWVTYLRNFF 223
Query: 53 ------AKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 106
+ G+ Q + +S L K+L S +K L ++ G++GYP
Sbjct: 224 PTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKS-----YSAKKKLKSSLTVGVIGYP 278
Query: 107 NVGKSSLINRLLKRRM------CPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 160
NVGKSS+IN L+ R CPA G+T L+ V+ L +DSPGI+ +
Sbjct: 279 NVGKSSVINALVNRSANGRSAPCPAGNVAGMTTSLREVKLDNKLRLVDSPGIVFPSSDSK 338
Query: 161 AAAIKLAICDDIGERSYD--VADVAAILVQMLARIP 194
+L + + + D VA VA+ ++Q L+R+P
Sbjct: 339 DDLYRLVMLNAVSSTKVDDPVA-VASYILQFLSRVP 373
>sp|Q10190|LSG1_SCHPO Large subunit GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsg1 PE=3 SV=1
Length = 616
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 57
DVV+++ DAR PL ++Q++ ++K L++N+ DM++ RN W++YF +
Sbjct: 172 DVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVNKADMLTEEQRNYWSSYFNENNI 231
Query: 58 KVIFSNGQLG------------MGTMKLSRLAKALASDVNVKRRSK--------GLLPRA 97
+F + ++ + + + ++L +D N S+ G+ +
Sbjct: 232 PFLFFSARMAAEANERGEDLETYESTSSNEIPESLQADENDVHSSRIATLKVLEGIFEKF 291
Query: 98 VRA----------GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFL 147
G+VGYPNVGKSS IN L+ + + PG T+ + + + + L
Sbjct: 292 ASTLPDGKTKMTFGLVGYPNVGKSSTINALVGSKKVSVSSTPGKTKHFQTINLSEKVSLL 351
Query: 148 DSPGII-PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTVGITALQNRYK 206
D PG++ P + QA + + R Y +A++ + + + + ++ R K
Sbjct: 352 DCPGLVFPSFATTQADLVLDGVLPIDQLREY--TGPSALMAERIPKEVLETLYTIRIRIK 409
Query: 207 IDMDGTCGKTFVQKLAL-----------HLFNGDTHQAAFRILTDFRKGKFGWISLERPP 255
+G G Q++ H D +AA +L D+ GK ++ PP
Sbjct: 410 PIEEGGTGVPSAQEVLFPFARSRGFMRAHHGTPDDSRAARILLKDYVNGKLLYV---HPP 466
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGNRKR----ILVLNREDMISMADRNAWATYFAKQGT 57
DVV++V DAR P+ T P ++ +L K I VLN+ D++ W ++
Sbjct: 218 DVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYP 277
Query: 58 KVIFS---NGQLGMGT-MKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G ++L R L +D + + G +GYPNVGKSS+
Sbjct: 278 TLAFHASLTNPFGKGAFIQLLRQFGKLHTD-----------KKQISVGFIGYPNVGKSSV 326
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII-PMRISDQAAAIKLAICDDI 172
IN L +++C AP G T+V +++ + + +D PG++ P S+ +K +
Sbjct: 327 INTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVV---- 382
Query: 173 GERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALH---LFNG- 228
V + + + A + + YKID + F++KLA L G
Sbjct: 383 -----QVEKIKSPEDHIGAVLERAKPEYISKTYKID-SWENAEDFLEKLAFRTGKLLKGG 436
Query: 229 --DTHQAAFRILTDFRKGKFGWISLERPP 255
D +L D+++G+ + +PP
Sbjct: 437 EPDLQTVGKMVLNDWQRGRIPFFV--KPP 463
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 38/269 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGNRKR----ILVLNREDMISMADRNAWATYFAKQGT 57
DVV++V DAR P+ T P ++ +L K I VLN+ D++ W ++
Sbjct: 218 DVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYP 277
Query: 58 KVIFS---NGQLGMGT-MKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ F G G ++L R L +D + + G +GYPNVGKSS+
Sbjct: 278 TLAFHASLTNPFGKGAFIQLLRQFGKLHTD-----------KKQISVGFIGYPNVGKSSV 326
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII-PMRISDQAAAIKLAICDDI 172
IN L +++C AP G T+V +++ + + +D PG++ P S+ +K +
Sbjct: 327 INTLRSKKVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVV---- 382
Query: 173 GERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALH---LFNG- 228
V + A + A + + YKI+ + F++KLAL L G
Sbjct: 383 -----QVEKIKAPQDHIGAVLERAKPEYISKTYKIE-SWENAEDFLEKLALRTGKLLKGG 436
Query: 229 --DTHQAAFRILTDFRKGKFGWISLERPP 255
D + +L D+++G+ + +PP
Sbjct: 437 EPDMLTVSKMVLNDWQRGRIPFFV--KPP 463
>sp|Q8CI11|GNL3_MOUSE Guanine nucleotide-binding protein-like 3 OS=Mus musculus GN=Gnl3
PE=1 SV=2
Length = 538
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAWATYFAKQGTK 58
D+V+EV DAR PL P +++ + G++K ILVLN+ D++ + W Y K+
Sbjct: 140 DIVLEVLDARDPLGCRCPQIEEAVIQSGSKKLILVLNKSDLVPKENLENWLNYLNKELPT 199
Query: 59 VIF---SNGQLGMGTMKLSRLAKALASDVNVKRRS--------KGLLPRAVRAGIVGYPN 107
V+F +N + + S + + + + + ++ G++G+PN
Sbjct: 200 VVFKASTNLKNRKTFKIKKKKVVPFQSKICCGKEALWKLLGDFQQSCGKDIQVGVIGFPN 259
Query: 108 VGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 153
VGKSS+IN L + +C G+TR ++ V K + +DSP +I
Sbjct: 260 VGKSSVINSLKQEWICNVGISMGLTRSMQIVPLDKQITIIDSPCLI 305
>sp|B6JW87|MTG1_SCHJY Mitochondrial GTPase 1 OS=Schizosaccharomyces japonicus (strain
yFS275 / FY16936) GN=mtg1 PE=3 SV=1
Length = 328
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI--SMADRNAWATYFAKQGTKV 59
DV++EVRDARIPLS+ +P ++ NRKR++V N+ D+ S D + + +
Sbjct: 24 DVIVEVRDARIPLSSRNPALETLAANRKRVVVYNKCDLAFPSAGDLCKTRALNSVRAFEE 83
Query: 60 IFSNGQLGMGTMKLSRLAKALASDV------------NVKRRSKGLLPRAVRAGIVGYPN 107
+ T++ R S+V + R V+ +VG PN
Sbjct: 84 TYVETLARWETIQTLRRYVGTVSNVPECIKRLLQLLQKLTYSDHAASNRTVKVFVVGMPN 143
Query: 108 VGKSSLIN-----RLLKRRMCPAAPRPGVTR-VLKWVRF--GKDLEFLDSPGIIPMRISD 159
VGKSS++N L +R++ PGVTR V + VR GK++ +D+PGI+ I
Sbjct: 144 VGKSSVMNALRHASLHRRKVAVVGSHPGVTRNVGEVVRLFEGKNVYMVDTPGIMLPTILQ 203
Query: 160 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQ 219
AIK A+ + + A V L+ L I T L + D+ TF+
Sbjct: 204 PEDAIKFALVHAMKDGRLHNAVVVDYLLYRLNLIDPNTYTRLSSPTN-DVS-----TFLH 257
Query: 220 KLALH---LFNGDTHQ---AAFRILTDFRKGKFGWISLE 252
A+H L G T A +L +R G FG L+
Sbjct: 258 NAAVHTGKLGKGGTVNDDLIASYVLQLYRTGFFGAFVLD 296
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 57
DV++ V DAR PL T ++++L ++ I VLN+ D++ AW K
Sbjct: 233 DVILHVIDARDPLGTRCRHVEKYLATEAPHKHLIFVLNKIDLVPSKTAAAWIRVLQKDHP 292
Query: 58 KVIFSN---GQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 113
+ G G++ L R L D + + G+VGYPNVGKSS+
Sbjct: 293 TCAMRSSIKNPFGRGSLIDLLRQFSILHKDR-----------KQISVGLVGYPNVGKSSI 341
Query: 114 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 159
IN L + + AP PG T+V ++V + + +D PGI+P +D
Sbjct: 342 INALRGKPVAKVAPIPGETKVWQYVTLMRRIYLIDCPGIVPPNQND 387
>sp|Q811S9|GNL3_RAT Guanine nucleotide-binding protein-like 3 OS=Rattus norvegicus
GN=Gnl3 PE=1 SV=1
Length = 538
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAWATYFAKQGTK 58
D+V+EV DAR PL P +++ + G +K +LVLN+ D++ + W TY K+
Sbjct: 140 DIVLEVLDARDPLGCRCPQVEEAVIQSGCKKLVLVLNKSDLVPKENLENWLTYLNKELPT 199
Query: 59 VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVG-------------- 104
V+F T +R V +SK + ++G
Sbjct: 200 VVFK-----ASTNLKNRKKTFKIKKKVVPFQSKLCCGKEALWKLLGGFQQSCGKGVQVGV 254
Query: 105 --YPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 153
+PNVGKSS+IN L + R+C G+TR ++ V K + +DSP I
Sbjct: 255 VGFPNVGKSSIINSLKQERICSVGVSMGLTRSMQIVPLDKQITIIDSPCFI 305
>sp|O74776|MTG1_SCHPO Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mtg1 PE=3 SV=1
Length = 328
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 28/275 (10%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIF 61
D+ +EVRDARIPL++ + +M+ +L + RI+V N+ D+ A + Q F
Sbjct: 37 DIFVEVRDARIPLTSRNYVMEDFLNKKNRIIVYNKCDLADTFHTKAKVSKHRIQNLAQQF 96
Query: 62 SNGQLGMGTMKLSR--------LAKALASDVNVKRRSKGLLPRAVRAG-----IVGYPNV 108
N + ++KA + R + L+ +A G VG PN
Sbjct: 97 QNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIRTLVDQASANGRVYVYFVGMPNT 156
Query: 109 GKSSLINR-----LLKRRMCPAAPRPGVT-RVLKWVRFGKDLE--FLDSPGIIPMRISDQ 160
GKSS++N L K + PGVT R+ + VR D++ LD+PGI+ I+
Sbjct: 157 GKSSILNSLRNVALRKSKSAIVGNYPGVTKRISEIVRLFNDMDVYMLDTPGIMTPSITKP 216
Query: 161 AAAIKLAICDDIGERSYDVADVAAILVQMLARIPTVGITALQNRYKI---DMDGTCGKTF 217
+KL++ + E V L+ L RI +L +++ + D+D T
Sbjct: 217 EDMLKLSLVGCVKEGIVHPVTVVDYLLFHLNRID----PSLYSKWSLPTNDVDEFLQNTA 272
Query: 218 VQKLALHLFNGDTHQAAFRILTDFRKGKFGWISLE 252
+ L D + + ++ +R G+ G L+
Sbjct: 273 YKARKLTKGGFDENFVSNYVIQQYRIGRLGRFQLD 307
>sp|Q17EJ1|MTG1_AEDAE Mitochondrial GTPase 1 OS=Aedes aegypti GN=AAEL003813 PE=3 SV=1
Length = 316
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 1 MDVVIEVRDARIPLSTTHPLMDQWL-GNRKRILVLNREDMIS------MADRNAWATYFA 53
+D VIEV DARIPLS + + G + ILVLN++D I + DR A
Sbjct: 38 VDCVIEVHDARIPLSGRNSEFRYTISGVKPHILVLNKKDKIDRRLQGRVVDRLQQEDSEA 97
Query: 54 KQGTKVIFSN--GQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKS 111
+ ++F+N Q G K+ LA+ L N R+ + I+G PNVGKS
Sbjct: 98 RH---ILFTNCKDQSCNGIRKVMPLAQDLILSSNRFNRAD---QKEYCIMIIGVPNVGKS 151
Query: 112 SLINRLLKRRM-----CPAAPRPGVTR-VLKWVRFGKD--LEFLDSPGIIPMRISDQAAA 163
SLIN L R + G+TR VL ++ +D + LD+PGI+ I+D
Sbjct: 152 SLINVLRNRHLNKKGASQVGAVAGITRSVLNKIKISEDPLVYLLDTPGILKPNIADTETG 211
Query: 164 IKLAICDDIGERSYDVADVAAILVQMLAR 192
++LA+ + + +A L+ +L +
Sbjct: 212 LRLALVSCLQDHLVGEELIADYLLYLLNK 240
>sp|Q6P4W5|GNL3_XENTR Guanine nucleotide-binding protein-like 3 OS=Xenopus tropicalis
GN=gnl3 PE=2 SV=2
Length = 548
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAWATYFAKQGTK 58
DVV+EV DAR PL + ++ + N++ +L+LN+ D++ W +
Sbjct: 136 DVVLEVLDARDPLGSRCAQAEEAVLKSPNKRLLLLLNKADLVPRDVLEKWLQVLTAELPT 195
Query: 59 VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKG----------LLPR---AVRAGIVGY 105
V F + +D+ + R G L P A++ G++G+
Sbjct: 196 VPFRCLPQAPSKSPGKKHKVPNTADLCTENRCPGGQVLLRILHSLCPSQSDAIKVGVIGF 255
Query: 106 PNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIK 165
NVGKSS+IN L + +C P G TRVL+ VR + LDSP ++ +S Q A +
Sbjct: 256 ANVGKSSVINSLKQSHVCNVGPTKGTTRVLQEVRLDPQIRMLDSPALV---VSPQNAPLA 312
Query: 166 LAICDDIGERSYDV-ADVAAIL 186
+ + + + + DV A V+AIL
Sbjct: 313 VML-RSVSDCNVDVLAAVSAIL 333
>sp|Q7ZX41|GNL3_XENLA Guanine nucleotide-binding protein-like 3 OS=Xenopus laevis GN=gnl3
PE=2 SV=1
Length = 542
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 2 DVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAWATYFAKQGTK 58
DV++EV DAR PL + ++ + N++ +L+LN+ D++ W + +
Sbjct: 135 DVIVEVLDARDPLGSRCSQAEEVVLKSPNKRLLLLLNKSDLVPREMVEKWLQVLSAELPT 194
Query: 59 VIF-SNGQLGMGTMKLSRLAKALASDVNVKRRSKG----------LLP---RAVRAGIVG 104
V F Q+ + K + +++D+ + G L P A++ G++G
Sbjct: 195 VPFRCVAQIQDKSEKKKKKKVPVSADLVTDPKCPGGQVLLKILHSLCPSHNEAIKVGVIG 254
Query: 105 YPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 153
+ NVGKSS+IN L + +C P G T+ L+ VR + LDSP ++
Sbjct: 255 FANVGKSSVINSLKQSHVCNVGPSKGTTKFLQEVRLDPQIRLLDSPALL 303
>sp|Q29AU5|MTG1_DROPS Mitochondrial GTPase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=GA14342 PE=3 SV=2
Length = 320
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 1 MDVVIEVRDARIPLSTTHP-LMDQWLGN--RKRILVLNREDMISMADRNAWATYFAKQGT 57
+D ++E+ D+RIPL+ + D G+ + ILVLN+ D++ + + +Q
Sbjct: 41 VDCIVEIHDSRIPLAGRNSQFFDTITGSGVKPHILVLNKVDLLGPKQQRSVLQQLRRQQP 100
Query: 58 K---VIFSN--GQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSS 112
+ ++F+N Q G + + LA L D + R++ + I+G PNVGKSS
Sbjct: 101 ELKNILFTNCKDQRNHGVLDILPLATQLVGDSSRYNRAQSAEHNIM---IIGVPNVGKSS 157
Query: 113 LIN-----RLLKRRMCPAAPRPGVTRVLKW---VRFGKDLEFLDSPGIIPMRISDQAAAI 164
+IN L KR GVTR + ++ + +D+PGI+ ++D +
Sbjct: 158 IINVLRNVHLKKRSAARVGAEAGVTRAVGERIKIQEKPAVYMIDTPGILQPSVTDDEMGM 217
Query: 165 KLAI 168
KLA+
Sbjct: 218 KLAL 221
>sp|Q9VCU5|MTG1_DROME Mitochondrial GTPase 1 OS=Drosophila melanogaster GN=CG17141 PE=1
SV=2
Length = 323
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 35/284 (12%)
Query: 1 MDVVIEVRDARIPLSTTHP-LMDQWLGN--RKRILVLNREDMISMADRNAWATYFAKQGT 57
+D ++E+ DARIPL+ + D G+ + ILVLN+ D++ + + +Q
Sbjct: 41 VDCIVEIHDARIPLAGRNSQFFDTITGSGVKPHILVLNKVDLLGAKQQKSVLQQLRRQQP 100
Query: 58 K---VIFSN--GQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSS 112
+ ++F+N Q G + + LA L S+ + R++ + I+G PNVGKSS
Sbjct: 101 ELQHILFTNCKDQRNNGVLDILPLATRLVSESSRFNRTQAAEHNLM---IIGVPNVGKSS 157
Query: 113 LIN-----RLLKRRMCPAAPRPGVTR-VLKWVRFGKD--LEFLDSPGIIPMRISDQAAAI 164
+IN L K+ G+TR V + ++ ++ + +D+PGI+ I D +
Sbjct: 158 VINVLRNVHLKKKSAARVGAEAGITRSVGERIKIQENPPVYMIDTPGILQPSIKDDEMGM 217
Query: 165 KLAIC----DDI-GERSYDVADVAAILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQ 219
KLA+ D I GE +AD + + V + L + D+ + +
Sbjct: 218 KLALVGCLPDHIVGEDL--IADYLLYWLNSHRKYDYVEMLKLSSGPSDDISAVLAEYAHR 275
Query: 220 KLALH---LFNGDTH------QAAFRILTDFRKGKFGWISLERP 254
+ H ++G AA + + FR G+ G ++L+ P
Sbjct: 276 EELFHKVKQYDGRVEVMTNLLAAARKFIHFFRSGQLGHMNLDEP 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,775,459
Number of Sequences: 539616
Number of extensions: 3639900
Number of successful extensions: 17488
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 599
Number of HSP's that attempted gapping in prelim test: 14994
Number of HSP's gapped (non-prelim): 2818
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)