BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025203
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1
Length = 255
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 137/221 (61%), Gaps = 3/221 (1%)
Query: 35 VKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLS 94
++D LK C +WR VE NN+ ++ +P+EC D++K+YM YK + R ++E Y +
Sbjct: 37 LRDELK--CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEY-A 93
Query: 95 GCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLN 154
L DG+D WIFDVD+TLLS +PY+ H +G E + ++ W++ APAL +L
Sbjct: 94 KSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLK 153
Query: 155 LFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQV 214
L+ E+ G K+FL++ R E RS TV+NL++ G+H W L LRG +D K YK++
Sbjct: 154 LYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSER 213
Query: 215 RKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
R +V+EG+RI G GDQWS G R+FKLPN MYY+
Sbjct: 214 RNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYYI 254
>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1
Length = 254
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 144/252 (57%), Gaps = 5/252 (1%)
Query: 6 VLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQEC 65
VL+ ++ +A +++ R+ + + C SWR+ VE +NI FE +P+EC
Sbjct: 5 VLVFFVATILVAWQCHAYDMFPLRMNTGYGARTPEVKCASWRLAVEAHNIFGFETIPEEC 64
Query: 66 IDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKH 125
++ K+Y+ QY++DS+ ++ Y L KD ++F +D T+LS IPY+KKH
Sbjct: 65 VEATKEYIHGEQYRSDSKTVNQQAYFYAR---DLEVHPKDTFVFSIDGTVLSNIPYYKKH 121
Query: 126 GFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI 185
G+G E+ N++ ++ W+ + APAL TL ++++ + G KI +S R ++ T NL
Sbjct: 122 GYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLK 181
Query: 186 HVGYHGWASLELRGLED-EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK- 243
GYH W L L+ +D YK R++L+++GY I G++GDQWS G + +
Sbjct: 182 KAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGES 241
Query: 244 RTFKLPNSMYYL 255
RTFKLPN +YY+
Sbjct: 242 RTFKLPNPLYYI 253
>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2
SV=2
Length = 291
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 140/247 (56%), Gaps = 5/247 (2%)
Query: 6 VLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQEC 65
VL+ ++ +A +++ R+ + + C SWR+ VE +NI FE +P+EC
Sbjct: 2 VLVFFVATILVAWQCHAYDMFPLRMNTGYGARTPEVKCASWRLAVEAHNIFGFETIPEEC 61
Query: 66 IDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKH 125
++ K+Y+ QY++DS+ ++ Y L KD ++F +D T+LS IPY+KKH
Sbjct: 62 VEATKEYIHGEQYRSDSKTVNQQAYFYAR---DLEVHPKDTFVFSIDGTVLSNIPYYKKH 118
Query: 126 GFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI 185
G+G E+ N++ ++ W+ + APAL TL ++++ + G KI +S R ++ T NL
Sbjct: 119 GYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLK 178
Query: 186 HVGYHGWASLELRGLED-EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK- 243
GYH W L L+ +D YK R++L+++GY I G++GDQWS G + +
Sbjct: 179 KAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGES 238
Query: 244 RTFKLPN 250
RTFKLPN
Sbjct: 239 RTFKLPN 245
>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1
Length = 254
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 135/236 (57%), Gaps = 4/236 (1%)
Query: 21 ADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKA 80
A + R++ + S + C S+R+ VE +NIR F+ +P+EC++ K Y+ Q+++
Sbjct: 21 AGYQRFPLRMKTGYGERSSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRS 80
Query: 81 DSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAW 140
DS+ ++ Y S D +IF +D+T+LS IPY++KHG+G E N + ++ W
Sbjct: 81 DSKTVNQQAFFYAS---EREVHHNDIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEW 137
Query: 141 MKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL 200
+ + APAL TL ++++ + G KI +S R + T NL G+H W L L+
Sbjct: 138 VNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDP 197
Query: 201 EDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK-RTFKLPNSMYYL 255
YK+ +R+ L+++GYRI G++GDQWS G + + RTFKLPN MYY+
Sbjct: 198 HLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPNPMYYI 253
>sp|O82122|VSP2_ARATH Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1
SV=1
Length = 265
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
Query: 43 CESWRINVELNNIREFEVVPQECIDHIKKYM-TSSQYKADSQRAAEEVKLYLSGCCSLAG 101
C SW + VE +NI +F+ VP C D+++ Y+ TS QY+ DS+ +E Y G +L
Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGL-ALKN 110
Query: 102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKE-SKAPALEHTLNLFHEIK 160
D + WIFD+DDTLLS+IPY+ K+G+G E+ + ++ W+ + P L L+L+ I
Sbjct: 111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170
Query: 161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
G++ ++S R + ++ T+DNL G W L L+ ++V YK++VRK LVK
Sbjct: 171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQV-VYKSKVRKSLVK 229
Query: 221 EGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
+GY I G +GDQW+ P R FKLPN +YY+
Sbjct: 230 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 263
>sp|O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2
SV=2
Length = 270
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 127/215 (59%), Gaps = 5/215 (2%)
Query: 43 CESWRINVELNNIREFEVVPQECIDHIKKYM-TSSQYKADSQRAAEEVKLYLSGCCSLAG 101
C SW + VE +NI F+ VP C +++ Y+ TS QY+ DS+ +E Y G +L
Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGL-ALKN 115
Query: 102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKA-PALEHTLNLFHEIK 160
D + WIFD+DDTLLS+IPY+ K+G+G E ++ +W++ ++ P L TL+L+ +
Sbjct: 116 DTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLL 175
Query: 161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
G++ ++S R + L TV+NL VG W L L+ + +V YK++VR LVK
Sbjct: 176 ELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQV-VYKSKVRNSLVK 234
Query: 221 EGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
+GY I G +GDQW+ P R FKLPN +YY+
Sbjct: 235 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 268
>sp|O04195|Y2992_ARATH Uncharacterized protein At2g39920 OS=Arabidopsis thaliana
GN=At2g39920 PE=2 SV=2
Length = 283
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 42 YCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAG 101
YC+ ++ +LN++ E +P C D + Y + + Y +
Sbjct: 87 YCKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPM-N 145
Query: 102 DGKDAWIFDVDDT-LLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIK 160
D D + D+DDT LL Y+ K +++E+K L L+ +++
Sbjct: 146 DNCDVVVIDIDDTNLLEQDSYYMK---------------YIEEAKHQKSILILALYSKLR 190
Query: 161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
++G + L+S R E+ R+ T++ L GY W+ L + ED +K + ++
Sbjct: 191 SQGYSMVLLSRRPETERNATIEQLKSRGYSDWSHL-IMSREDTRQKEE----------LE 239
Query: 221 EGYRIWGVVGDQWSSFEGL--PKPKRTFKLPNSMY 253
G+R+ GV+G+ G + KR FKLP+ Y
Sbjct: 240 RGHRVIGVIGNHMDVLRGQWNWQSKRLFKLPSLTY 274
>sp|P26093|HEL_HAEIN Lipoprotein E OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=hel PE=1 SV=2
Length = 274
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
D+D+T+L PY + + W W+ ++ A+ + + + + K+F V
Sbjct: 84 DLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 143
Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
++R++S +S T+D++ +G++G KK + KA + K+GY I
Sbjct: 144 TNRKDSTEKSGTIDDMKRLGFNGVEESAFY-----LKKDKSAKAARFAEIEKQGYEIVLY 198
Query: 229 VGDQWSSF 236
VGD F
Sbjct: 199 VGDNLDDF 206
>sp|A3LWH3|DBP7_PICST ATP-dependent RNA helicase DBP7 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DPB7 PE=3 SV=2
Length = 733
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 122 FKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV 181
+K HG ++ S+ +A++K+SK+ H++ ++ +RG+ + ++S E +T+
Sbjct: 481 YKLHGSLSQQTRTSTLQAFIKDSKS---NHSILFCTDVASRGLDLPNIASVIEYDPPFTI 537
Query: 182 DNLIH-------VGYHGWASL-ELRGLEDEY 204
D+ +H VG G A+L L G E+ Y
Sbjct: 538 DDHLHRIGRSARVGKEGTATLFLLPGNEEGY 568
>sp|A9GIS9|LON3_SORC5 Lon protease 3 OS=Sorangium cellulosum (strain So ce56) GN=lon3
PE=3 SV=1
Length = 830
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKV-- 207
E ++ E NRG +IFL + R T D++ VG G A ++L L D KV
Sbjct: 42 ERSIAALDEAMNRGKEIFLAAQRNAKTNDPTPDDIFGVGSVG-AIMQLLRLPDGTVKVLI 100
Query: 208 -QQYKAQVRKRLVKEGY 223
+ +A++R+ + + Y
Sbjct: 101 EGKRRARIRRYVQSDAY 117
>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1854
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 121 YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT 180
YFKKH G S E ES AP+ +HT H+++N + SR E S
Sbjct: 1541 YFKKHPRVGYLPVQSVLEGDALESPAPSPQHTT---HQLQND------MHSRLEMYAS-- 1589
Query: 181 VDNLIHVGYHGWASLELRGLEDEYKKVQQY 210
L V Y G S +DE++ + QY
Sbjct: 1590 --RLAQVEYGGTGSNSTPDSDDEHQLIAQY 1617
>sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens
GN=PRKDC PE=1 SV=3
Length = 4128
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 6 VLILAFTSLCIASALADWNILTQRI-RRHAVKDSLKTYCESWRINVELNNIREFEVVPQE 64
V I+ FT+ + ++ W +L + + H ++ ++T CE I + +++ +P
Sbjct: 1339 VRIMEFTTTLLNTSPEGWKLLKKDLCNTHLMRVLVQTLCEPASIGFNIGDVQVMAHLPDV 1398
Query: 65 CIDHIKKYMTSSQYK 79
C++ + K + S YK
Sbjct: 1399 CVN-LMKALKMSPYK 1412
>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1051
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 121 YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT 180
YFKKH G S E ES AP+ +HT H+++N + SR E S
Sbjct: 738 YFKKHPRVGYLPVQSVLEGDALESPAPSPQHTT---HQLQND------MHSRLEMYAS-- 786
Query: 181 VDNLIHVGYHGWASLELRGLEDEYKKVQQY 210
L V Y G S +DE++ + QY
Sbjct: 787 --RLAQVEYGGTGSNSTPDSDDEHQLIAQY 814
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,735,538
Number of Sequences: 539616
Number of extensions: 3965591
Number of successful extensions: 10308
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 10279
Number of HSP's gapped (non-prelim): 19
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)