Query 025209
Match_columns 256
No_of_seqs 215 out of 1610
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:38:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025209.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025209hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0224 Aquaporin (major intri 100.0 7.6E-32 1.6E-36 241.9 11.5 163 84-254 28-204 (316)
2 KOG0223 Aquaporin (major intri 100.0 5.1E-31 1.1E-35 233.3 13.5 155 81-244 4-159 (238)
3 COG0580 GlpF Glycerol uptake f 100.0 4.1E-30 8.9E-35 227.3 14.3 161 85-252 2-169 (241)
4 PF00230 MIP: Major intrinsic 100.0 1.5E-29 3.2E-34 222.2 16.5 165 81-248 1-165 (227)
5 PTZ00016 aquaglyceroporin; Pro 100.0 4.5E-29 9.8E-34 227.8 19.0 159 85-252 47-218 (294)
6 PLN00026 aquaporin NIP; Provi 100.0 2.2E-29 4.7E-34 229.7 16.1 145 85-243 68-212 (298)
7 PLN00184 aquaporin NIP1; Provi 100.0 1.1E-28 2.4E-33 225.2 17.6 151 84-243 50-203 (296)
8 PLN00167 aquaporin TIP5; Provi 100.0 1.4E-27 3E-32 214.2 17.6 164 81-252 15-178 (256)
9 PRK05420 aquaporin Z; Provisio 100.0 2.6E-27 5.5E-32 209.7 15.9 148 88-243 2-157 (231)
10 PLN00182 putative aquaporin NI 100.0 4.5E-27 9.6E-32 213.4 17.9 146 85-243 39-184 (283)
11 PLN00166 aquaporin TIP2; Provi 99.9 1.7E-26 3.7E-31 206.5 17.8 156 81-244 11-166 (250)
12 PLN00027 aquaporin TIP; Provis 99.9 1.3E-26 2.9E-31 207.5 16.5 154 82-243 14-168 (252)
13 PLN00183 putative aquaporin NI 99.9 1.5E-26 3.3E-31 209.1 16.8 146 84-243 41-186 (274)
14 cd00333 MIP Major intrinsic pr 99.9 4.7E-26 1E-30 200.9 15.7 148 89-244 1-156 (228)
15 TIGR00861 MIP MIP family chann 99.9 5.4E-25 1.2E-29 192.7 14.1 148 93-244 1-148 (216)
16 PLN00182 putative aquaporin NI 99.7 1.2E-16 2.5E-21 145.4 10.8 98 86-198 157-254 (283)
17 PLN00183 putative aquaporin NI 99.7 2.6E-16 5.7E-21 142.6 10.8 99 87-200 160-258 (274)
18 PLN00026 aquaporin NIP; Provi 99.7 3E-16 6.6E-21 143.5 10.1 99 86-199 185-283 (298)
19 cd00333 MIP Major intrinsic pr 99.7 5.2E-16 1.1E-20 136.9 10.2 99 85-195 127-227 (228)
20 PRK05420 aquaporin Z; Provisio 99.6 2E-15 4.3E-20 133.8 8.4 100 85-199 129-229 (231)
21 TIGR00861 MIP MIP family chann 99.6 4.2E-15 9E-20 130.2 9.1 96 85-192 119-215 (216)
22 KOG0223 Aquaporin (major intri 99.6 1.7E-15 3.6E-20 134.5 6.3 100 85-200 129-228 (238)
23 PLN00184 aquaporin NIP1; Provi 99.6 9.6E-15 2.1E-19 133.7 10.9 98 86-198 176-273 (296)
24 PLN00166 aquaporin TIP2; Provi 99.5 4.6E-14 1E-18 126.5 11.0 105 85-202 137-241 (250)
25 PLN00027 aquaporin TIP; Provis 99.5 2.4E-13 5.3E-18 121.9 11.6 102 85-199 139-240 (252)
26 COG0580 GlpF Glycerol uptake f 99.5 1.8E-13 3.9E-18 121.5 9.5 137 34-198 96-240 (241)
27 PTZ00016 aquaglyceroporin; Pro 99.5 1.5E-13 3.2E-18 125.9 8.8 103 85-200 181-292 (294)
28 PLN00167 aquaporin TIP5; Provi 99.4 6E-13 1.3E-17 119.7 8.1 101 86-200 142-242 (256)
29 PF00230 MIP: Major intrinsic 99.4 1.9E-12 4.2E-17 113.6 9.1 96 85-193 132-227 (227)
30 KOG0224 Aquaporin (major intri 98.2 1.4E-06 3E-11 79.4 4.9 104 85-201 165-278 (316)
31 PRK10927 essential cell divisi 72.9 3.2 7E-05 38.6 2.9 18 33-50 42-59 (319)
32 COG2116 FocA Formate/nitrite f 59.0 1.5E+02 0.0031 27.2 15.0 140 87-238 31-179 (265)
33 KOG2422 Uncharacterized conser 55.7 3.9 8.4E-05 41.1 0.0 13 154-166 282-294 (665)
34 PRK10805 formate transporter; 53.5 1.8E+02 0.004 26.7 12.2 104 130-238 68-182 (285)
35 PF01226 Form_Nir_trans: Forma 48.0 2E+02 0.0044 25.6 14.1 112 127-240 54-173 (250)
36 KOG3200 Uncharacterized conser 38.3 13 0.00028 32.1 0.5 26 4-29 29-54 (224)
37 PRK12446 undecaprenyldiphospho 36.8 8.3 0.00018 36.0 -0.9 21 147-167 6-26 (352)
38 PF13786 DUF4179: Domain of un 30.6 17 0.00036 26.9 0.0 6 19-24 8-13 (94)
39 TIGR00790 fnt formate/nitrite 30.0 3.9E+02 0.0085 23.6 10.0 106 130-237 43-157 (239)
40 PF03033 Glyco_transf_28: Glyc 29.6 13 0.00027 29.1 -0.9 17 151-167 7-23 (139)
41 PF09512 ThiW: Thiamine-precur 27.6 2.4E+02 0.0052 23.6 6.3 17 179-195 69-85 (150)
42 PF08188 Protamine_3: Spermato 25.4 48 0.001 21.6 1.4 18 12-29 8-25 (48)
43 PF11223 DUF3020: Protein of u 25.2 42 0.00091 22.8 1.2 13 9-21 1-13 (49)
44 PF14034 Spore_YtrH: Sporulati 24.9 1.9E+02 0.0042 22.6 5.0 47 153-199 53-101 (102)
45 PF03842 Silic_transp: Silicon 24.0 4.6E+02 0.0099 25.8 8.3 116 132-248 136-255 (512)
46 PF09692 Arb1: Argonaute siRNA 23.8 19 0.00041 34.8 -1.0 33 11-58 2-34 (396)
47 PF01440 Gemini_AL2: Geminivir 23.4 17 0.00038 29.8 -1.1 20 17-36 26-45 (134)
48 KOG0009 Ubiquitin-like/40S rib 22.7 31 0.00066 24.3 0.2 20 9-28 23-42 (62)
49 PRK12757 cell division protein 21.3 1.1E+02 0.0024 27.8 3.5 18 33-50 7-24 (256)
50 PF06796 NapE: Periplasmic nit 20.3 34 0.00073 23.9 -0.0 33 9-41 6-38 (56)
No 1
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.6e-32 Score=241.91 Aligned_cols=163 Identities=26% Similarity=0.437 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHH
Q 025209 84 KWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 163 (256)
Q Consensus 84 ~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla 163 (256)
...+.|++++||+||++++++++++++....+.. ....++.+.++||+++++.+++.+.+||||+|||||++
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g--------~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a 99 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGG--------TGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLA 99 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccC--------CCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHH
Confidence 4568999999999999999999998886654432 33456778899999999999999999999999999999
Q ss_pred HHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCC--------------ccccCCCCchHHHHHHHHHHHH
Q 025209 164 LFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGG--------------ANELADGYSTGVGLAAEIIGTF 229 (256)
Q Consensus 164 ~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~--------------~~~~~~~~s~~~af~~E~v~Tf 229 (256)
+++.|+++|.++++|+++|++||++|++.+|.+|++.++++.++ ++.|++..+..++|+.|+++|.
T Consensus 100 ~~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa 179 (316)
T KOG0224|consen 100 MCILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTA 179 (316)
T ss_pred HHHhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988876554 1346788899999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCcccc
Q 025209 230 VLVYTVFSATDPKRSARDSHVPVSL 254 (256)
Q Consensus 230 iLv~~il~~~d~k~~~~~~~~P~l~ 254 (256)
+|++++++++|+||..+.+..|+++
T Consensus 180 ~L~~~l~aI~D~rN~~p~g~~p~~i 204 (316)
T KOG0224|consen 180 MLVLCLFAITDKRNPIPTGLHPLVI 204 (316)
T ss_pred HHHhheeEEecCCCCCCcchhHHHH
Confidence 9999999999999988888888753
No 2
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.1e-31 Score=233.28 Aligned_cols=155 Identities=55% Similarity=0.797 Sum_probs=140.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHH
Q 025209 81 ELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 160 (256)
Q Consensus 81 e~~~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAv 160 (256)
+.++++++|++++||++|++|+|+++++....... ..+.+.+.+++++|++++..+++++++||||+|||+
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~---------~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAV 74 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKY---------GGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAV 74 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---------CCCchhHHHHHHHHHHHHHHHhhhccccccccCHHH
Confidence 44568999999999999999999999988765431 245678889999999999999999999999999999
Q ss_pred HHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHH-hc
Q 025209 161 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-AT 239 (256)
Q Consensus 161 Tla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~-~~ 239 (256)
|+|+++.|++++.++..||++|++|+++|+++.+.+.+.+++..+.+.+.++++.+.+|+++.|+++||+|++++++ ++
T Consensus 75 T~a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~ 154 (238)
T KOG0223|consen 75 TLAFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATAT 154 (238)
T ss_pred HHHHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEee
Confidence 99999999999999999999999999999999999998865555566778899999999999999999999999998 89
Q ss_pred cCCCC
Q 025209 240 DPKRS 244 (256)
Q Consensus 240 d~k~~ 244 (256)
|+|++
T Consensus 155 d~~~~ 159 (238)
T KOG0223|consen 155 DPRRS 159 (238)
T ss_pred cCCCc
Confidence 98887
No 3
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.1e-30 Score=227.27 Aligned_cols=161 Identities=33% Similarity=0.513 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
+++.+++++||+||++++++++|++........ +....+++.++++||+.+++.+|+++++||+|+|||||++.
T Consensus 2 ~~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~------~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~l 75 (241)
T COG0580 2 TTLTKKLLAEFLGTFLLIFFGNGSVAAVALKGS------KALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIAL 75 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccHHHHHHhccc------cccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHH
Confidence 456788899999999999999998876554332 13456677899999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcC------CCccccCC-CCchHHHHHHHHHHHHHHHHHHHH
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYG------GGANELAD-GYSTGVGLAAEIIGTFVLVYTVFS 237 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~------~~~~~~~~-~~s~~~af~~E~v~TfiLv~~il~ 237 (256)
++.|+++|.+++.||++|++||++|+.+++.++++++..++ .+...+.| ..+..++|+.|+++||+|+++|++
T Consensus 76 a~~g~fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila 155 (241)
T COG0580 76 AVRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILA 155 (241)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877654 12222333 247899999999999999999999
Q ss_pred hccCCCCCCCCCCcc
Q 025209 238 ATDPKRSARDSHVPV 252 (256)
Q Consensus 238 ~~d~k~~~~~~~~P~ 252 (256)
++|+++. ..+..|.
T Consensus 156 ~~~~~~~-~~~~apl 169 (241)
T COG0580 156 LTDDGNA-NAGFAPL 169 (241)
T ss_pred hhccCcc-cccchHH
Confidence 9876655 3335554
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.97 E-value=1.5e-29 Score=222.15 Aligned_cols=165 Identities=35% Similarity=0.490 Sum_probs=137.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHH
Q 025209 81 ELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 160 (256)
Q Consensus 81 e~~~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAv 160 (256)
|.++++++|++++||+||++|+|+++++.........+. +.....+...+++++|+++++.+++++++||+|+|||+
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~---~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaV 77 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSS---GSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAV 77 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTT---STTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc---cccccccHHHHHHHHHHhhhhhhhhhhhccccccccch
Confidence 567799999999999999999999988554322221110 00112467789999999999999999999999999999
Q ss_pred HHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 025209 161 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (256)
Q Consensus 161 Tla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d 240 (256)
|++.++.|+++|.+.++|+++|++|+++|+.+.+.++++.........+.+.++.+..++|+.|+++|++|+++++...|
T Consensus 78 Tla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~ 157 (227)
T PF00230_consen 78 TLAFALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVAD 157 (227)
T ss_dssp HHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhheeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcc
Confidence 99999999999999999999999999999999999998864444445666788899999999999999999999999999
Q ss_pred CCCCCCCC
Q 025209 241 PKRSARDS 248 (256)
Q Consensus 241 ~k~~~~~~ 248 (256)
+++..+.+
T Consensus 158 ~~~~~~~~ 165 (227)
T PF00230_consen 158 DKRKFPLG 165 (227)
T ss_dssp TTSSSTSS
T ss_pred cccccccc
Confidence 98877644
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.96 E-value=4.5e-29 Score=227.83 Aligned_cols=159 Identities=28% Similarity=0.360 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
+.++|++++||++|++|+|++++++....... ...+.+.+++++|+++++.+++++++||+|+|||||+++
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---------~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~ 117 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---------NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGN 117 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---------CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHH
Confidence 67889999999999999999998765432111 123456789999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCC-------------CccccCCCCchHHHHHHHHHHHHHH
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-------------GANELADGYSTGVGLAAEIIGTFVL 231 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~-------------~~~~~~~~~s~~~af~~E~v~TfiL 231 (256)
++.|+++|.++++||++|++||++|++++|.+|++.++..+. +.....++.+..++|+.|+++||+|
T Consensus 118 ~l~g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iL 197 (294)
T PTZ00016 118 AVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAIL 197 (294)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876543221 1122344678899999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCcc
Q 025209 232 VYTVFSATDPKRSARDSHVPV 252 (256)
Q Consensus 232 v~~il~~~d~k~~~~~~~~P~ 252 (256)
++++++++|+|+....+..|+
T Consensus 198 v~~ila~~d~~~~~~~~~~pl 218 (294)
T PTZ00016 198 LLVILAITDPNNCPAFNYLPV 218 (294)
T ss_pred HHHHHHhccCccCCCcCcccH
Confidence 999999999887654444454
No 6
>PLN00026 aquaporin NIP; Provisional
Probab=99.96 E-value=2.2e-29 Score=229.70 Aligned_cols=145 Identities=26% Similarity=0.394 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
++++|++++||++||+|+|+++++........ ...+.+.+++++|+++++.+++++++||+|+|||||+++
T Consensus 68 ~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~---------~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~ 138 (298)
T PLN00026 68 VSLTRKLGAEFVGTFILIFAATAGPIVNQKYD---------GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAF 138 (298)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccccC---------CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHH
Confidence 56789999999999999999987543211110 112466688999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhccCCC
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKR 243 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d~k~ 243 (256)
++.|+++|.+.|+||++|++||++|+++++.++++... .+.+ .++.+..++|+.|+++||+|+++++++.++++
T Consensus 139 al~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~---~g~t--~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~ 212 (298)
T PLN00026 139 AALRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMS---GGVT--VPSVSTGQAFALEFIITFNLLFVVTAVATDTR 212 (298)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---Ccee--eecccHHHHHHHHHHHHHHHHHhheeeecCCC
Confidence 99999999999999999999999999999999876432 2222 24678999999999999999999997654443
No 7
>PLN00184 aquaporin NIP1; Provisional
Probab=99.96 E-value=1.1e-28 Score=225.20 Aligned_cols=151 Identities=25% Similarity=0.346 Sum_probs=123.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHH
Q 025209 84 KWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 163 (256)
Q Consensus 84 ~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla 163 (256)
++++++.+++||+|||+|+|++++++....... ...+++.++++||+++++.+++++++||+|+|||||++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~---------~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla 120 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQND---------NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIA 120 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---------CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHH
Confidence 457889999999999999999998765322111 12346778999999999999999999999999999999
Q ss_pred HHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCC---ccccCCCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 025209 164 LFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGG---ANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (256)
Q Consensus 164 ~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~---~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d 240 (256)
+++.|+++|.++|+||++|++||++|+++++.+++......... .....+..+..++|+.|+++||+|+++++++.+
T Consensus 121 ~al~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~ 200 (296)
T PLN00184 121 FASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVAT 200 (296)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheec
Confidence 99999999999999999999999999999999986543221111 112233458899999999999999999998866
Q ss_pred CCC
Q 025209 241 PKR 243 (256)
Q Consensus 241 ~k~ 243 (256)
+++
T Consensus 201 ~~~ 203 (296)
T PLN00184 201 DNR 203 (296)
T ss_pred cCc
Confidence 544
No 8
>PLN00167 aquaporin TIP5; Provisional
Probab=99.95 E-value=1.4e-27 Score=214.18 Aligned_cols=164 Identities=28% Similarity=0.396 Sum_probs=129.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHH
Q 025209 81 ELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 160 (256)
Q Consensus 81 e~~~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAv 160 (256)
+...++++|++++||++||+|+|++++++......... +.....+++.+++++|+++++.+++++++||+|+||||
T Consensus 15 ~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~----~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAv 90 (256)
T PLN00167 15 QSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPD----AASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAV 90 (256)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc----ccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHH
Confidence 33347789999999999999999999987643211000 11123457789999999999999999999999999999
Q ss_pred HHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 025209 161 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (256)
Q Consensus 161 Tla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d 240 (256)
|+++++.|+++|.+.|+||++|++||++|+.+++.++++... +.+...++.+..++++.|+++||+|+++++.++|
T Consensus 91 tl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~ 166 (256)
T PLN00167 91 TFGMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHV----PTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGD 166 (256)
T ss_pred HHHHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccc----cccccCcccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999888664311 1222334567789999999999999999999999
Q ss_pred CCCCCCCCCCcc
Q 025209 241 PKRSARDSHVPV 252 (256)
Q Consensus 241 ~k~~~~~~~~P~ 252 (256)
+|+.......|+
T Consensus 167 ~~~~~~~~~~pl 178 (256)
T PLN00167 167 PRRGLLGAIGPL 178 (256)
T ss_pred ccccCCCCcchH
Confidence 877543333443
No 9
>PRK05420 aquaporin Z; Provisional
Probab=99.95 E-value=2.6e-27 Score=209.67 Aligned_cols=148 Identities=28% Similarity=0.473 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHh
Q 025209 88 YRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLA 167 (256)
Q Consensus 88 ~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~ 167 (256)
+|++++||++|++|+|++++++....... ....+.+.+++++|+++++.+++++++||+|+|||||+++++.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--------~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~ 73 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--------ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAG 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--------CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHh
Confidence 68999999999999999998754321110 1123466789999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhh--hhcC--CCc----cccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 025209 168 RKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYY--TRYG--GGA----NELADGYSTGVGLAAEIIGTFVLVYTVFSAT 239 (256)
Q Consensus 168 G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~--~~~~--~~~----~~~~~~~s~~~af~~E~v~TfiLv~~il~~~ 239 (256)
|+++|.+.++||++|++||++|+.+++.++++.. ...+ ... ...+...+..++|+.|+++||+|+++++..+
T Consensus 74 ~~i~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~ 153 (231)
T PRK05420 74 GRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGAT 153 (231)
T ss_pred CCCCHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998876432 1110 000 1122345789999999999999999999999
Q ss_pred cCCC
Q 025209 240 DPKR 243 (256)
Q Consensus 240 d~k~ 243 (256)
|+|+
T Consensus 154 ~~~~ 157 (231)
T PRK05420 154 DKRA 157 (231)
T ss_pred CCCC
Confidence 9765
No 10
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.95 E-value=4.5e-27 Score=213.44 Aligned_cols=146 Identities=25% Similarity=0.357 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
++++|++++||+|||+|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||+++
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---------~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~ 109 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---------GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTF 109 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---------CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHH
Confidence 57889999999999999999998765422110 112456688999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhccCCC
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKR 243 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d~k~ 243 (256)
++.|+++|.++++||++|++||++|+++++.+++... .+.+...++.+..++|+.|+++||+|+++++++.++++
T Consensus 110 ~~~~~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~ 184 (283)
T PLN00182 110 AIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTP----EAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR 184 (283)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 9999999999999999999999999999999885321 12222334568899999999999999999998765443
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=99.95 E-value=1.7e-26 Score=206.53 Aligned_cols=156 Identities=33% Similarity=0.515 Sum_probs=125.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHH
Q 025209 81 ELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAV 160 (256)
Q Consensus 81 e~~~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAv 160 (256)
|.++++.+|++++||++||+|+|++++++......... ...+..+.+.+++++|+.+++.+++++++||+|+||||
T Consensus 11 ~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~----~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAv 86 (250)
T PLN00166 11 DSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSD----AALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAV 86 (250)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc----ccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHH
Confidence 34457788999999999999999999986642111000 00112346678999999999999999999999999999
Q ss_pred HHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 025209 161 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (256)
Q Consensus 161 Tla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d 240 (256)
|+++++.|+++|.+.|+||++|++|+++|+.+++.++++.- .......++.+..++++.|+++||+|+++++.+.+
T Consensus 87 t~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~ 162 (250)
T PLN00166 87 TLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGES----VPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAA 162 (250)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998875421 11223445678999999999999999999998766
Q ss_pred CCCC
Q 025209 241 PKRS 244 (256)
Q Consensus 241 ~k~~ 244 (256)
++|+
T Consensus 163 ~~~~ 166 (250)
T PLN00166 163 DPKK 166 (250)
T ss_pred cccc
Confidence 5553
No 12
>PLN00027 aquaporin TIP; Provisional
Probab=99.95 E-value=1.3e-26 Score=207.54 Aligned_cols=154 Identities=35% Similarity=0.544 Sum_probs=123.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHH
Q 025209 82 LTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVT 161 (256)
Q Consensus 82 ~~~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvT 161 (256)
...+.++|++++||++|++|+|++++++......... ......+.+.+++++|+++++.+++++++||+|+|||+|
T Consensus 14 ~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~----~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvt 89 (252)
T PLN00027 14 ASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDN----GSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVT 89 (252)
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC----CCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHH
Confidence 3346778999999999999999999876532111000 001123566789999999999999999999999999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhc-c
Q 025209 162 FGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSAT-D 240 (256)
Q Consensus 162 la~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~-d 240 (256)
+++++.|+++|.+.|+||++|++||++|+.+++.++++.. .+.....++.+..++|+.|+++||+|+++++.+. |
T Consensus 90 l~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~ 165 (252)
T PLN00027 90 FGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVD 165 (252)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999887764321 1233345678999999999999999999999875 5
Q ss_pred CCC
Q 025209 241 PKR 243 (256)
Q Consensus 241 ~k~ 243 (256)
+|+
T Consensus 166 ~~~ 168 (252)
T PLN00027 166 PKK 168 (252)
T ss_pred ccc
Confidence 554
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.94 E-value=1.5e-26 Score=209.14 Aligned_cols=146 Identities=20% Similarity=0.303 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHH
Q 025209 84 KWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 163 (256)
Q Consensus 84 ~~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla 163 (256)
+.+.+|.+++||++||+|+|++++++....... ...+.+.+++++|+++++.+++++++||+|+|||||++
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---------~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla 111 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---------GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIA 111 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---------CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHH
Confidence 355679999999999999999998765422110 12345668999999999999999999999999999999
Q ss_pred HHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhccCCC
Q 025209 164 LFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKR 243 (256)
Q Consensus 164 ~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d~k~ 243 (256)
+++.|+++|.++|+||++|++|+++|+.+++.+++... +.....+..+..++++.|+++|++|+++++++.++++
T Consensus 112 ~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-----~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~ 186 (274)
T PLN00183 112 FATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-----DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQ 186 (274)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccccCCCcccHHHHHHHHHHHHHHHHHhhheeecccc
Confidence 99999999999999999999999999999988876421 1112234456789999999999999999999888664
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.94 E-value=4.7e-26 Score=200.87 Aligned_cols=148 Identities=41% Similarity=0.655 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHhc
Q 025209 89 RALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLAR 168 (256)
Q Consensus 89 r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~G 168 (256)
|++++||++|++|+|+++++..+..... ....+.+.+++++|+.+.+.+++++++||+|+|||+|+++++.|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~--------~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~ 72 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAG--------GASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGG 72 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccC--------CCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhC
Confidence 4688999999999999999876433211 01234567899999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCc--------cccCCCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 025209 169 KVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA--------NELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (256)
Q Consensus 169 ~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~--------~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d 240 (256)
+++|.+.++||++|++|+++|+.+++.++++++++..... +.+.++.+..++++.|+++|++|+++++.+.|
T Consensus 73 ~~~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~ 152 (228)
T cd00333 73 RFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTD 152 (228)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999988766543221 24566789999999999999999999999988
Q ss_pred CCCC
Q 025209 241 PKRS 244 (256)
Q Consensus 241 ~k~~ 244 (256)
+++.
T Consensus 153 ~~~~ 156 (228)
T cd00333 153 DPNG 156 (228)
T ss_pred cccc
Confidence 7654
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.93 E-value=5.4e-25 Score=192.67 Aligned_cols=148 Identities=38% Similarity=0.629 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHhcccch
Q 025209 93 AEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL 172 (256)
Q Consensus 93 aEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~G~~~~ 172 (256)
+||++|++++|+++++.......... ......+.+.+++++|+++++.+++++++||+|+|||+|+++++.|+++|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~ 76 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAY----GAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPL 76 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhccccc----CCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCH
Confidence 59999999999999986653221100 00111246678999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025209 173 VRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRS 244 (256)
Q Consensus 173 ~~~~~yivaQ~lGailga~l~~~l~~~~~~~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d~k~~ 244 (256)
.+.++||++|++|+++|+.+++.++++.+.........+.++.+..++++.|+++|++|+++++...+++++
T Consensus 77 ~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~ 148 (216)
T TIGR00861 77 KRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNR 148 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCC
Confidence 999999999999999999999998887652211112223456789999999999999999999998887554
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.69 E-value=1.2e-16 Score=145.45 Aligned_cols=98 Identities=26% Similarity=0.332 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q 025209 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (256)
Q Consensus 86 ~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~ 165 (256)
+.++++++|+++|+++++++++.+...... + ...++++|+++++++++.+++||+|+|||||++++
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~-------------~-~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpa 222 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAV-------------G-ELAGIAVGMTIILNVFVAGPISGASMNPARSLGPA 222 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccC-------------C-cchhHHHHHHHHHHHHHccccCccccChHHHHHHH
Confidence 457899999999999999988765432110 0 11588999999999999999999999999999999
Q ss_pred HhcccchhhHHHHHHHHhHHHHHHHHHHHHHhh
Q 025209 166 LARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK 198 (256)
Q Consensus 166 l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~ 198 (256)
+.++ .|.+.|+||++|++||++|+++++.+..
T Consensus 223 l~~~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 223 IVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHhc-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 9754 4789999999999999999999998864
No 17
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.67 E-value=2.6e-16 Score=142.58 Aligned_cols=99 Identities=24% Similarity=0.355 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q 025209 87 FYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 166 (256)
Q Consensus 87 l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l 166 (256)
.++.+++|+++|+++++++++.+...... +. ..++.+|+.+++.+++.+++||+|+|||||+++++
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~~-------------~~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai 225 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQSL-------------GH-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAI 225 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccCC-------------CC-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHH
Confidence 46899999999999999988776543111 01 14778999999999999999999999999999999
Q ss_pred hcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 025209 167 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSY 200 (256)
Q Consensus 167 ~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~ 200 (256)
.+ .+|.+.|+||++|++|+++|+++++.++.+.
T Consensus 226 ~~-~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 226 VS-WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred hC-CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 86 4799999999999999999999999987654
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.66 E-value=3e-16 Score=143.47 Aligned_cols=99 Identities=27% Similarity=0.396 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q 025209 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (256)
Q Consensus 86 ~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~ 165 (256)
+.++.++.||++|+++++++++........ +. ..++++|+++++.+++.+++||+|+|||||++++
T Consensus 185 s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~-------------~~-~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPa 250 (298)
T PLN00026 185 STGQAFALEFIITFNLLFVVTAVATDTRAV-------------GE-LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPA 250 (298)
T ss_pred cHHHHHHHHHHHHHHHHHhheeeecCCCCc-------------CC-ccchHHHHHHHHHHHHhcccCccccChHHHHHHH
Confidence 567899999999999999987653221110 00 1578999999999999999999999999999999
Q ss_pred HhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 025209 166 LARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (256)
Q Consensus 166 l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~ 199 (256)
+.++ +|.++|+||++|++||++|+++++.+.-.
T Consensus 251 l~~~-~~~~~wVy~vaPilGAilga~ly~~~~~~ 283 (298)
T PLN00026 251 VAAG-NYRAIWIYLVAPTLGALAGAGTYTAVKLR 283 (298)
T ss_pred HhcC-CchheeHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9865 78899999999999999999998887443
No 19
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.65 E-value=5.2e-16 Score=136.95 Aligned_cols=99 Identities=23% Similarity=0.225 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+.++.+++|+++|+++++++++........ ......++.+|+.+...++..+++||+|+||||++++
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~------------~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~ 194 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNGP------------PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGP 194 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccccccC------------CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHH
Confidence 5678999999999999999998875432110 0122368999999999999999999999999999999
Q ss_pred HHhccc--chhhHHHHHHHHhHHHHHHHHHHHH
Q 025209 165 FLARKV--SLVRAVMYMVAQCLGAISGVGLVKA 195 (256)
Q Consensus 165 ~l~G~~--~~~~~~~yivaQ~lGailga~l~~~ 195 (256)
++.+.. +|.+.|+||++|++|+++|+++++.
T Consensus 195 ~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 195 ALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred HHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 998887 7999999999999999999998764
No 20
>PRK05420 aquaporin Z; Provisional
Probab=99.60 E-value=2e-15 Score=133.83 Aligned_cols=100 Identities=22% Similarity=0.254 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+..+.++.|+++|+++++++++.+..+... -..++.+|+.+..+++..++.||+.+||||++++
T Consensus 129 ~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~---------------~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gp 193 (231)
T PRK05420 129 YSLLAALVCEVVLTAFFLLVILGATDKRAPA---------------GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGV 193 (231)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---------------cchHHHHHHHHHHHHHHhhccCCCccCcHHHHHH
Confidence 4568999999999999999988765422110 1268999999999999999999999999999999
Q ss_pred HHh-cccchhhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 025209 165 FLA-RKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (256)
Q Consensus 165 ~l~-G~~~~~~~~~yivaQ~lGailga~l~~~l~~~ 199 (256)
++. |.+.+...|+||++|++|+++++++++.++.+
T Consensus 194 al~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 194 ALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred HHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 985 55566789999999999999999998887654
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.59 E-value=4.2e-15 Score=130.19 Aligned_cols=96 Identities=24% Similarity=0.238 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+.++.++.|+++|+++++++++......... .....++.+|+.++..++..+++||+|+||||++++
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~------------~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~ 186 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRVP------------RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGP 186 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCCC------------CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhH
Confidence 46689999999999999999987765321110 011378999999999999999999999999999999
Q ss_pred HHhc-ccchhhHHHHHHHHhHHHHHHHHH
Q 025209 165 FLAR-KVSLVRAVMYMVAQCLGAISGVGL 192 (256)
Q Consensus 165 ~l~G-~~~~~~~~~yivaQ~lGailga~l 192 (256)
++.+ ..+|.+.|+||++|++|+++|+.+
T Consensus 187 ~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 187 ALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred HHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 9965 578999999999999999999876
No 22
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.7e-15 Score=134.53 Aligned_cols=100 Identities=20% Similarity=0.223 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+-++.++.|++.||.++|..++...+.... ...++.+|+++.+.+++.+++||+++|||||+++
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---------------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGp 193 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDPRRS---------------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGP 193 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecCCCc---------------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhH
Confidence 3457899999999999999888743322222 2379999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSY 200 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~ 200 (256)
++..+. |..+|+||++|++|+++++++++.++.+.
T Consensus 194 Avv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 194 AVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 997664 99999999999999999999999987654
No 23
>PLN00184 aquaporin NIP1; Provisional
Probab=99.58 E-value=9.6e-15 Score=133.68 Aligned_cols=98 Identities=22% Similarity=0.337 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q 025209 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (256)
Q Consensus 86 ~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~ 165 (256)
+.+++++.|+++|+++++++++......... ...++.+|+.+++++++.+++||+++||||+++++
T Consensus 176 s~~~af~~E~i~TfvLv~~il~~~~~~~~~~--------------~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPa 241 (296)
T PLN00184 176 SDLQAFVMEFIVTFYLMFIISGVATDNRAIG--------------ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPA 241 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHheeccCcCCC--------------cchHHHHHHHHHHHHHHhcccCccccCchhhHHHH
Confidence 5678999999999999999987654321110 12578999999999999999999999999999999
Q ss_pred HhcccchhhHHHHHHHHhHHHHHHHHHHHHHhh
Q 025209 166 LARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK 198 (256)
Q Consensus 166 l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~ 198 (256)
+... .|...|+||++|++|+++|+++++.+..
T Consensus 242 l~~~-~~~~~WVy~vgPilGa~laal~y~~l~~ 273 (296)
T PLN00184 242 MVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRY 273 (296)
T ss_pred HHhh-cccccchHHhHHHHHHHHHHHHHHHHhc
Confidence 9643 4678999999999999999999988764
No 24
>PLN00166 aquaporin TIP2; Provisional
Probab=99.53 E-value=4.6e-14 Score=126.49 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+.++.++.|+++|+++++++++.+........ ....++.+|+.++.+++..++.||+++||||++++
T Consensus 137 ~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~------------~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gP 204 (250)
T PLN00166 137 LGAIEGVVMEIVVTFALVYTVYATAADPKKGSL------------GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGP 204 (250)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccccccccc------------ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHH
Confidence 456799999999999999998876532211100 11368999999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhh
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYT 202 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~~ 202 (256)
++..+ .|.+.|+||++|++|+++|+++++.++.+.++
T Consensus 205 al~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~ 241 (250)
T PLN00166 205 AVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVFIGSYA 241 (250)
T ss_pred HHhcC-CCcccchhhHHHHHHHHHHHHHHHHHhcccCC
Confidence 99654 48899999999999999999999877655443
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.49 E-value=2.4e-13 Score=121.94 Aligned_cols=102 Identities=17% Similarity=0.191 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+.++.++.|+++||++++++++.......... ....++.+|+.+..+++..++.||+.+||||++++
T Consensus 139 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~------------~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gP 206 (252)
T PLN00027 139 VGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDL------------GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP 206 (252)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccccccCCc------------cchHHHHHHHHHHHHHHhcccccccccCcchhHHH
Confidence 356789999999999999998765432211100 11368899999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~ 199 (256)
++... .|...|+||++|++|+++|+++++.++.+
T Consensus 207 al~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 207 AVVSW-TWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HHHhh-cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99754 47889999999999999999999988743
No 26
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.47 E-value=1.8e-13 Score=121.52 Aligned_cols=137 Identities=18% Similarity=0.131 Sum_probs=102.5
Q ss_pred chhhhheeeeeeeeCCCCCCCccccccCccCCCCCCCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHhheeeccc
Q 025209 34 VLSVFSVSLQIIVTGFPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYK 113 (256)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~e~~~~~l~r~~laEfigT~lfvf~~~g~~~~~~ 113 (256)
+...-+..+|+++.++- .+. +++..+.+++..+.|.. +++.+.++.|+++||+|++.+++.+....
T Consensus 96 GA~~ga~l~~~~~~~~~---~~~--~~~~~~~~g~~~t~p~~---------~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 96 GAFAGAALLYLLYYGKI---LET--EGDPLASLGAFSTSPGG---------YSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHhhhh---Hhh--cCCchhhccccccCCCc---------ccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 33344455666666654 211 11334667777777777 67889999999999999999988654111
Q ss_pred cCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHH----hcccch----hhHHHHHHHHhHH
Q 025209 114 SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL----ARKVSL----VRAVMYMVAQCLG 185 (256)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l----~G~~~~----~~~~~yivaQ~lG 185 (256)
. + .-..++.+|+.++.++++.++.||..+||||++++.+ .|..+. .+.|+||++|++|
T Consensus 162 ~-~-------------~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiG 227 (241)
T COG0580 162 A-N-------------AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVG 227 (241)
T ss_pred c-c-------------ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHH
Confidence 1 1 0137999999999999999999999999999999988 342222 4899999999999
Q ss_pred HHHHHHHHHHHhh
Q 025209 186 AISGVGLVKAFQK 198 (256)
Q Consensus 186 ailga~l~~~l~~ 198 (256)
|++|+++++.++.
T Consensus 228 a~lg~~~~~~~~~ 240 (241)
T COG0580 228 AILGALLYKLLLG 240 (241)
T ss_pred HHHHHHHHHHHcc
Confidence 9999999987653
No 27
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.47 E-value=1.5e-13 Score=125.89 Aligned_cols=103 Identities=23% Similarity=0.265 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+..+.++.|+++|+++++++++.+..+.... .+ ..++.+|+.+..+++..++.||+.+||||++++
T Consensus 181 ~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~-----------~~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGP 247 (294)
T PTZ00016 181 EGNFYAIFSELILTAILLLVILAITDPNNCPA-----------FN--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGP 247 (294)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccCccCCC-----------cC--cccHHHHHHHHHHHHhccCCCCCcccchhhHHH
Confidence 45689999999999999999987754322110 01 157889999999999999999999999999999
Q ss_pred HHh-----cccchh----hHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 025209 165 FLA-----RKVSLV----RAVMYMVAQCLGAISGVGLVKAFQKSY 200 (256)
Q Consensus 165 ~l~-----G~~~~~----~~~~yivaQ~lGailga~l~~~l~~~~ 200 (256)
++. |...|. ..|+||++|++|+++|+++++.+..+.
T Consensus 248 al~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 248 RLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred HHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 985 333443 589999999999999999998887554
No 28
>PLN00167 aquaporin TIP5; Provisional
Probab=99.40 E-value=6e-13 Score=119.68 Aligned_cols=101 Identities=21% Similarity=0.138 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q 025209 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (256)
Q Consensus 86 ~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~ 165 (256)
+.++.++.|+++|++++++++..+..+... . ....++.+|+.++.+.+..++.||+.+||||++++.
T Consensus 142 s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~-~------------~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPa 208 (256)
T PLN00167 142 TGFGASVLEGVLTFGLVYTVYAAGDPRRGL-L------------GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSA 208 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccccccC-C------------CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHH
Confidence 446889999999999999988665432110 0 012588899999999999999999999999999999
Q ss_pred HhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 025209 166 LARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSY 200 (256)
Q Consensus 166 l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~ 200 (256)
+..+ .|...|+||++|++|+++++++++.++.+.
T Consensus 209 l~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 209 VVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred Hhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 9754 477889999999999999999998887543
No 29
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.37 E-value=1.9e-12 Score=113.60 Aligned_cols=96 Identities=25% Similarity=0.272 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+.++.++.|+++|++++++.+........... +. ..++.+|+.+.++.+..++.||+.+||||++++
T Consensus 132 ~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~-----------~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~ 199 (227)
T PF00230_consen 132 ISLGQAFFSEFIGTFILVLVILAVADDKRKFPL-----------GP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGP 199 (227)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTS-----------SG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHH
T ss_pred chhhhhhhhhhhhhhHHHhhhhhhccccccccc-----------cc-ccceeEEEEEeecccccccccccccCchhhcCc
Confidence 456899999999999999988876543322210 11 368899999999999999999999999999999
Q ss_pred HHhcccchhhHHHHHHHHhHHHHHHHHHH
Q 025209 165 FLARKVSLVRAVMYMVAQCLGAISGVGLV 193 (256)
Q Consensus 165 ~l~G~~~~~~~~~yivaQ~lGailga~l~ 193 (256)
.+.... |.+.|+||++|++|+++|++++
T Consensus 200 ~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 200 ALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred eeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 997554 8899999999999999999875
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.22 E-value=1.4e-06 Score=79.42 Aligned_cols=104 Identities=18% Similarity=0.113 Sum_probs=80.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHH
Q 025209 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (256)
Q Consensus 85 ~~l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~ 164 (256)
.+++++++-||++|.+++...+..++.+. . . .....++.+|+.++++-...+--+|--+||||.+++
T Consensus 165 ls~~n~F~DqfigTa~L~~~l~aI~D~rN-~-~-----------p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgP 231 (316)
T KOG0224|consen 165 LSLWNGFFDQFIGTAMLVLCLFAITDKRN-P-I-----------PTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGP 231 (316)
T ss_pred hhhhHHHHHHHHHHHHHHhheeEEecCCC-C-C-----------CcchhHHHHHHHHHHHHHHhhcccCcccCcccccch
Confidence 57899999999999999998776665432 1 1 122368899999999999999999999999999998
Q ss_pred HHh----c--c--cch--hhHHHHHHHHhHHHHHHHHHHHHHhhhhh
Q 025209 165 FLA----R--K--VSL--VRAVMYMVAQCLGAISGVGLVKAFQKSYY 201 (256)
Q Consensus 165 ~l~----G--~--~~~--~~~~~yivaQ~lGailga~l~~~l~~~~~ 201 (256)
-+. | . +++ .-.|+-|+++++|+++|++++..+..-+.
T Consensus 232 RlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~h~ 278 (316)
T KOG0224|consen 232 RLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGFHI 278 (316)
T ss_pred HHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeeccC
Confidence 663 2 1 122 22456689999999999999988766543
No 31
>PRK10927 essential cell division protein FtsN; Provisional
Probab=72.90 E-value=3.2 Score=38.63 Aligned_cols=18 Identities=33% Similarity=0.239 Sum_probs=15.0
Q ss_pred cchhhhheeeeeeeeCCC
Q 025209 33 AVLSVFSVSLQIIVTGFP 50 (256)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~ 50 (256)
+++..|...||+|..+++
T Consensus 42 avlv~fiGGLyFith~k~ 59 (319)
T PRK10927 42 AVLVTFIGGLYFITHHKK 59 (319)
T ss_pred HHHHHHhhheEEEecCCC
Confidence 466678899999999887
No 32
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=58.96 E-value=1.5e+02 Score=27.18 Aligned_cols=140 Identities=16% Similarity=0.112 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhheeeccccCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q 025209 87 FYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 166 (256)
Q Consensus 87 l~r~~laEfigT~lfvf~~~g~~~~~~~~~~~~~~~~~~~~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l 166 (256)
++++..+-+..++-+++.+...+. ..+ ...+...+.-++++++.+.+++++.+..--+ |=-.......
T Consensus 31 ~l~ai~AG~~i~lg~~~~~~~~~~---~~~-------~~~~~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~ 98 (265)
T COG2116 31 LLLAILAGAFIGLGFLFYITVGTG---LPG-------APGGLAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVL 98 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccc---CCC-------CCcchHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHH
Confidence 556666666666655554322111 010 0122345666777777777777765553222 2222223344
Q ss_pred hcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhh-hhcCCCcc--------ccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025209 167 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYY-TRYGGGAN--------ELADGYSTGVGLAAEIIGTFVLVYTVFS 237 (256)
Q Consensus 167 ~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~~~-~~~~~~~~--------~~~~~~s~~~af~~E~v~TfiLv~~il~ 237 (256)
.++++|.|++--|+-=.+|=++|++++-++++-.- .....+.. .-.-+.+..+.|+.-+++.++.++.++.
T Consensus 99 ~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm 178 (265)
T COG2116 99 SKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWM 178 (265)
T ss_pred hCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 78899998887777767777777776555542110 00111111 0122345677888888888888777764
Q ss_pred h
Q 025209 238 A 238 (256)
Q Consensus 238 ~ 238 (256)
.
T Consensus 179 ~ 179 (265)
T COG2116 179 S 179 (265)
T ss_pred H
Confidence 3
No 33
>KOG2422 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.68 E-value=3.9 Score=41.14 Aligned_cols=13 Identities=8% Similarity=0.204 Sum_probs=7.5
Q ss_pred CCCChHHHHHHHH
Q 025209 154 GHINPAVTFGLFL 166 (256)
Q Consensus 154 ahlNPAvTla~~l 166 (256)
-|+|--..++-++
T Consensus 282 YHvdsLLqva~~~ 294 (665)
T KOG2422|consen 282 YHVDSLLQVADIF 294 (665)
T ss_pred cchhHHHHHHHHH
Confidence 4666555555554
No 34
>PRK10805 formate transporter; Provisional
Probab=53.47 E-value=1.8e+02 Score=26.65 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHhcccchhhHHHHH----HHHhHHHHHHHHHHHHHhhhhhhhcC
Q 025209 130 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYM----VAQCLGAISGVGLVKAFQKSYYTRYG 205 (256)
Q Consensus 130 ~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~G~~~~~~~~~yi----vaQ~lGailga~l~~~l~~~~~~~~~ 205 (256)
.+..++.+.+.+.++++.-...--+ |-..+++ .+.++.++.++.-.| ++-++|+++-+.+++.. ..+....
T Consensus 68 ~ll~~~~F~vGlilIvl~g~eLFTg--n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s--~~~~~~~ 142 (285)
T PRK10805 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLS--GEYMTAN 142 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchh--hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cccccCc
Confidence 3445666666666666665553222 5554443 567888888777444 44555555544443321 1110000
Q ss_pred CC-------ccccCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 025209 206 GG-------ANELADGYSTGVGLAAEIIGTFVLVYTVFSA 238 (256)
Q Consensus 206 ~~-------~~~~~~~~s~~~af~~E~v~TfiLv~~il~~ 238 (256)
.. ...-..+.+..+.|+-=+.+.++..+.++..
T Consensus 143 ~~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 143 GQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred cHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001123567888888888888888888743
No 35
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=48.03 E-value=2e+02 Score=25.65 Aligned_cols=112 Identities=16% Similarity=0.115 Sum_probs=63.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhh--hhhh--
Q 025209 127 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK--SYYT-- 202 (256)
Q Consensus 127 ~~~~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~--~~~~-- 202 (256)
+...+..++.+++.+.++++.-+..--+ |-......++.++.+|.+.+--|.-=.+|=++|++++-.+.. ....
T Consensus 54 g~~~l~~g~~F~~Gl~lIv~~g~eLfTg--n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~ 131 (250)
T PF01226_consen 54 GLAKLVGGLVFPIGLVLIVFLGGELFTG--NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSS 131 (250)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHT---TTT--TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTT
T ss_pred cHHHHHHHHHHHHHHHHHHHhcchhccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 3445556777777777777776554322 555555556688888888665555555555555554333322 1111
Q ss_pred ----hcCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 025209 203 ----RYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (256)
Q Consensus 203 ----~~~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d 240 (256)
+.-........+.+..+.|+.=+++.++..+.++....
T Consensus 132 ~~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~ 173 (250)
T PF01226_consen 132 PAMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFA 173 (250)
T ss_dssp THHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000011123457888999999999999998886543
No 36
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.34 E-value=13 Score=32.14 Aligned_cols=26 Identities=27% Similarity=0.461 Sum_probs=22.5
Q ss_pred eeccccCCchhhHhHhHhHHHhhhhc
Q 025209 4 FISHTKNKPKKRKRKRKRKRLLSRCA 29 (256)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (256)
+.|||.+-|+.|||+-+..||.|--+
T Consensus 29 ~lshIe~ap~pkW~~L~NRRLqNyGG 54 (224)
T KOG3200|consen 29 YLSHIENAPQPKWRVLANRRLQNYGG 54 (224)
T ss_pred HHHHHhcCCCchhHHHHhhhhhhcCC
Confidence 45899999999999999999988543
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=36.81 E-value=8.3 Score=36.03 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=17.8
Q ss_pred HhcCCCCCCCChHHHHHHHHh
Q 025209 147 CTAGISGGHINPAVTFGLFLA 167 (256)
Q Consensus 147 ~~~~vSGahlNPAvTla~~l~ 167 (256)
+.++-||||+.||++++-.+.
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~ 26 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLK 26 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHH
Confidence 456779999999999998874
No 38
>PF13786 DUF4179: Domain of unknown function (DUF4179); PDB: 3FBQ_A.
Probab=30.60 E-value=17 Score=26.90 Aligned_cols=6 Identities=50% Similarity=1.071 Sum_probs=0.0
Q ss_pred hHhHHH
Q 025209 19 RKRKRL 24 (256)
Q Consensus 19 ~~~~~~ 24 (256)
+++++.
T Consensus 8 ~~~~~~ 13 (94)
T PF13786_consen 8 KKKKRI 13 (94)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 333433
No 39
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=30.00 E-value=3.9e+02 Score=23.60 Aligned_cols=106 Identities=16% Similarity=0.096 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhh--hhh-hhc--
Q 025209 130 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK--SYY-TRY-- 204 (256)
Q Consensus 130 ~l~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~--~~~-~~~-- 204 (256)
.+..++.+.+.+.++++.-...--+ |-......++.++.+|.+.+--|.-=++|=++|+.++-.++. ... +..
T Consensus 43 ~~l~~~~F~~gl~~Iv~~g~eLfTg--n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~ 120 (239)
T TIGR00790 43 KLVGGATFPIGLILVVIAGSDLFTG--NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGP 120 (239)
T ss_pred HHHHHHHHHHHHheeeeeCcccccc--chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccH
Confidence 3444555555555554443332211 433333445678888887776666555555555555433321 110 000
Q ss_pred ----CCCccccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025209 205 ----GGGANELADGYSTGVGLAAEIIGTFVLVYTVFS 237 (256)
Q Consensus 205 ----~~~~~~~~~~~s~~~af~~E~v~TfiLv~~il~ 237 (256)
-.....-..+.+..+.|+.=+.+.++..+.++.
T Consensus 121 ~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~lav~~ 157 (239)
T TIGR00790 121 WGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000001123357778888888888888887764
No 40
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=29.63 E-value=13 Score=29.06 Aligned_cols=17 Identities=24% Similarity=0.382 Sum_probs=14.9
Q ss_pred CCCCCCChHHHHHHHHh
Q 025209 151 ISGGHINPAVTFGLFLA 167 (256)
Q Consensus 151 vSGahlNPAvTla~~l~ 167 (256)
-|+||+||.+.++-.+.
T Consensus 7 Gt~Ghv~P~lala~~L~ 23 (139)
T PF03033_consen 7 GTRGHVYPFLALARALR 23 (139)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHh
Confidence 46799999999999984
No 41
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=27.61 E-value=2.4e+02 Score=23.61 Aligned_cols=17 Identities=18% Similarity=0.184 Sum_probs=9.8
Q ss_pred HHHHhHHHHHHHHHHHH
Q 025209 179 MVAQCLGAISGVGLVKA 195 (256)
Q Consensus 179 ivaQ~lGailga~l~~~ 195 (256)
+.+.+.||++++++++.
T Consensus 69 fPGsm~GA~laGllyr~ 85 (150)
T PF09512_consen 69 FPGSMFGALLAGLLYRK 85 (150)
T ss_pred hccchHHHHHHHHHHHH
Confidence 44555666666665554
No 42
>PF08188 Protamine_3: Spermatozal protamine family; InterPro: IPR012601 This entry consists of the spermatozal protamines. Spermatozal protamines play an important role in remodelling of the sperm chromatin during mammalian spermiogenesis. Nuclear elongation and chromatin condensation are concomitant with modifications in the basic protein complement associated with DNA. Somatic histones are initially replaced by testis-specific histone variants, then by transitional proteins, and ultimately by protamines [].; GO: 0003677 DNA binding, 0035092 sperm chromatin condensation, 0000228 nuclear chromosome
Probab=25.42 E-value=48 Score=21.55 Aligned_cols=18 Identities=39% Similarity=0.416 Sum_probs=8.6
Q ss_pred chhhHhHhHhHHHhhhhc
Q 025209 12 PKKRKRKRKRKRLLSRCA 29 (256)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~ 29 (256)
|||||.+|.||---||.+
T Consensus 8 kkkrksvrrrktrknqrk 25 (48)
T PF08188_consen 8 KKKRKSVRRRKTRKNQRK 25 (48)
T ss_pred HHHHHHHHHHHHHhhHHH
Confidence 445555555544444433
No 43
>PF11223 DUF3020: Protein of unknown function (DUF3020); InterPro: IPR021386 This family of fungal proteins is conserved towards the C terminus of HMG domains. The function is not known.
Probab=25.23 E-value=42 Score=22.76 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=9.4
Q ss_pred cCCchhhHhHhHh
Q 025209 9 KNKPKKRKRKRKR 21 (256)
Q Consensus 9 ~~~~~~~~~~~~~ 21 (256)
|++.|+|||.-|.
T Consensus 1 nrerKkkwre~n~ 13 (49)
T PF11223_consen 1 NRERKKKWREANA 13 (49)
T ss_pred CcchHHHHHHHHH
Confidence 4567888887664
No 44
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=24.88 E-value=1.9e+02 Score=22.60 Aligned_cols=47 Identities=17% Similarity=0.404 Sum_probs=37.3
Q ss_pred CCCCChHHHHHHHH-hccc-chhhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 025209 153 GGHINPAVTFGLFL-ARKV-SLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (256)
Q Consensus 153 GahlNPAvTla~~l-~G~~-~~~~~~~yivaQ~lGailga~l~~~l~~~ 199 (256)
||.+.|-+.+--=+ .|.. +..+-.+|+++-++||=.|..+++++..+
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 68888888887655 3433 56677899999999999999999988654
No 45
>PF03842 Silic_transp: Silicon transporter; InterPro: IPR004693 Marine diatoms such as Cylindrotheca fusiformis encode at least six silicon transport protein homologues which exhibit similar size and topology. One characterised member of the family (Sit1) functions in the energy-dependent uptake of either silicic acid [Si(OH)4] or silicate [Si(OH)3O-] by a Na+ symport mechanism. The system is found in marine diatoms, which make their "glass houses" out of silicon.
Probab=24.01 E-value=4.6e+02 Score=25.81 Aligned_cols=116 Identities=12% Similarity=0.093 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHhcccchhhHHHHHHHHhHHHHHHHHHHHHHhhh----hhhhcCCC
Q 025209 132 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS----YYTRYGGG 207 (256)
Q Consensus 132 ~iala~Gl~l~~~i~~~~~vSGahlNPAvTla~~l~G~~~~~~~~~yivaQ~lGailga~l~~~l~~~----~~~~~~~~ 207 (256)
.+-+..|++..+...+.+..+ +++|-+...--++...+....++.-..-+..|-+=.+-+++.++.. .+..++.+
T Consensus 136 ~IFL~~GlaMil~t~~lGQLt-tQVNAshcMlDyINnyFalFTlyvam~IEfsGvmHssYLIq~i~~~~sGKPI~SNE~P 214 (512)
T PF03842_consen 136 FIFLDIGLAMILFTCVLGQLT-TQVNASHCMLDYINNYFALFTLYVAMAIEFSGVMHSSYLIQNILSALSGKPIESNEPP 214 (512)
T ss_pred HHhhccchHHHHHHHhhcccc-HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCcccCCCc
Confidence 345556666655566666665 7899888888888877777777888888888887777776655432 22211111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 025209 208 ANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDS 248 (256)
Q Consensus 208 ~~~~~~~~s~~~af~~E~v~TfiLv~~il~~~d~k~~~~~~ 248 (256)
-+....-+-.++.+++=.++.|-+-.++-+..+.+....++
T Consensus 215 rtg~~~~FFWgRvlmSl~ILgF~lAVtl~ALf~G~Ttmw~g 255 (512)
T PF03842_consen 215 RTGFQFAFFWGRVLMSLAILGFCLAVTLVALFNGKTTMWPG 255 (512)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 11111112356777777777887777777776655555443
No 46
>PF09692 Arb1: Argonaute siRNA chaperone (ARC) complex subunit Arb1; InterPro: IPR018606 Arb1 is required for histone H3 Lys9 (H3-K9) methylation, heterochromatin, assembly and siRNA generation in fission yeast [].
Probab=23.82 E-value=19 Score=34.76 Aligned_cols=33 Identities=36% Similarity=0.488 Sum_probs=18.5
Q ss_pred CchhhHhHhHhHHHhhhhccCccchhhhheeeeeeeeCCCCCCCcccc
Q 025209 11 KPKKRKRKRKRKRLLSRCACGFAVLSVFSVSLQIIVTGFPMAKDTGVA 58 (256)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (256)
||||||.+|+|+| ..+|-=--+ ..||.+++-.|
T Consensus 2 kk~~~Ks~~~k~r-----~tGFEe~y~----------DpPmTp~E~~E 34 (396)
T PF09692_consen 2 KKKKKKSKRGKKR-----PTGFEEYYA----------DPPMTPAEAEE 34 (396)
T ss_pred CCCCCCccCCCCC-----CCCcchhcC----------CCCCCHHHHHH
Confidence 4444445555554 666655444 67777765444
No 47
>PF01440 Gemini_AL2: Geminivirus AL2 protein; InterPro: IPR000942 Geminiviruses are characterised by a genome of circular single-stranded DNA encapsidated in twinned (geminate) quasi-isometric particles, from which the group derives its name []. Most geminiviruses can be divided into two subgroups on the basis of host range and/or insect vector: i.e. those that infect dicotyledenous plants and are transmitted by the same whitefly species, and those that infect monocotyledenous plants and are transmitted by different leafhopper vectors. The genomes of the whitefly-transmitted African cassava mosaic virus, Tomato golden mosaic virus (TGMV) and Bean golden mosaic virus (BGMV) possess a bipartite genome. By contrast, only a single DNA component has been identified for the leafhopper-transmitted Maize streak virus (MSV) and Wheat dwarf virus (WDV) [, ]. Beet curly top virus (BCTV), and Tobacco yellow dwarf virus belong to a third possible subgroup. Like MSV and WDV, BCTV is transmitted by a specific leafhopper species, yet like the whitefly-transmitted geminiviruses it has a host range confined to dicotyledenous plants. Sequence comparison of the whitefly-transmitted Squash leaf curl virus (SqLCV) and Tomato yellow leaf curl virus (TYLCV) with the genomic components of TGMV and BGMV reveals a close evolutionary relationship [, , ]. Amino acid sequence alignments of Potato yellow mosaic virus (PYMV) proteins with those encoded by other geminiviruses show that PYMV is closely related to geminiviruses isolated from the New World, especially in the putative coat protein gene regions []. Comparison of MSV DNA-encoded proteins with those of other geminiviruses infecting monocotyledonous plants, including Panicum streak virus [] and Miscanthus streak virus (MiSV) [], reveal high levels of similarity.; GO: 0005198 structural molecule activity, 0019028 viral capsid
Probab=23.36 E-value=17 Score=29.75 Aligned_cols=20 Identities=25% Similarity=0.645 Sum_probs=13.7
Q ss_pred hHhHhHHHhhhhccCccchh
Q 025209 17 RKRKRKRLLSRCACGFAVLS 36 (256)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~ 36 (256)
|.-+|+|.--.|+|++-+..
T Consensus 26 r~iRRRRIDL~CGCSyyihi 45 (134)
T PF01440_consen 26 RAIRRRRIDLPCGCSYYIHI 45 (134)
T ss_pred ccccCCccccCCCCEEEeec
Confidence 34455677789999876544
No 48
>KOG0009 consensus Ubiquitin-like/40S ribosomal S30 protein fusion [Translation, ribosomal structure and biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=22.71 E-value=31 Score=24.30 Aligned_cols=20 Identities=45% Similarity=0.566 Sum_probs=12.5
Q ss_pred cCCchhhHhHhHhHHHhhhh
Q 025209 9 KNKPKKRKRKRKRKRLLSRC 28 (256)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~ 28 (256)
+|-||||++-|-++||.-..
T Consensus 23 kqeK~kkk~GRa~~Rlqy~r 42 (62)
T KOG0009|consen 23 KQEKKKKKRGRAKKRLQYNR 42 (62)
T ss_pred hhhhcccccchHHHHhhhhe
Confidence 45566666667777775433
No 49
>PRK12757 cell division protein FtsN; Provisional
Probab=21.29 E-value=1.1e+02 Score=27.75 Aligned_cols=18 Identities=33% Similarity=0.272 Sum_probs=15.4
Q ss_pred cchhhhheeeeeeeeCCC
Q 025209 33 AVLSVFSVSLQIIVTGFP 50 (256)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~ 50 (256)
+++..|...||.|...++
T Consensus 7 a~lv~f~gGLyfi~h~k~ 24 (256)
T PRK12757 7 AVLVTFIGGLYFITHNKK 24 (256)
T ss_pred HHHHHHhhheEEEecCCC
Confidence 566778999999999987
No 50
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=20.32 E-value=34 Score=23.88 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=21.2
Q ss_pred cCCchhhHhHhHhHHHhhhhccCccchhhhhee
Q 025209 9 KNKPKKRKRKRKRKRLLSRCACGFAVLSVFSVS 41 (256)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 41 (256)
+++..+.+|++-.|.++-=..+-||+++|..+.
T Consensus 6 ~~~~~~~~k~~E~~~flfl~~~l~PiL~v~~Vg 38 (56)
T PF06796_consen 6 KSESDKSTKRSELKAFLFLAVVLFPILAVAFVG 38 (56)
T ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444555566677788888998886654
Done!