Query 025211
Match_columns 256
No_of_seqs 156 out of 2023
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 05:50:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dzr_A Protein-(glutamine-N5) 99.9 8.5E-26 2.9E-30 182.2 13.2 191 12-208 2-201 (215)
2 2b3t_A Protein methyltransfera 99.9 2.8E-24 9.6E-29 180.9 20.2 187 10-208 81-272 (276)
3 3evz_A Methyltransferase; NYSG 99.9 1.5E-22 5.2E-27 165.5 19.5 189 11-215 31-221 (230)
4 1nv8_A HEMK protein; class I a 99.9 2.3E-22 7.7E-27 169.9 18.3 175 11-208 95-278 (284)
5 3lpm_A Putative methyltransfer 99.9 7.5E-22 2.6E-26 164.5 19.3 192 13-218 26-223 (259)
6 3q87_B N6 adenine specific DNA 99.9 1.7E-21 5.9E-26 152.3 17.2 164 16-215 2-165 (170)
7 2ozv_A Hypothetical protein AT 99.9 5E-21 1.7E-25 159.7 15.1 169 41-218 35-216 (260)
8 2h00_A Methyltransferase 10 do 99.8 1.5E-19 5E-24 150.0 19.0 184 11-199 31-238 (254)
9 3p9n_A Possible methyltransfer 99.8 1.3E-19 4.4E-24 143.8 15.5 134 18-176 20-156 (189)
10 1yzh_A TRNA (guanine-N(7)-)-me 99.8 1.4E-18 4.8E-23 140.5 16.2 163 13-198 18-181 (214)
11 4gek_A TRNA (CMO5U34)-methyltr 99.8 3.1E-18 1.1E-22 142.8 16.5 109 41-174 69-179 (261)
12 3tma_A Methyltransferase; thum 99.8 7.7E-18 2.6E-22 146.4 18.6 154 21-199 185-339 (354)
13 2fca_A TRNA (guanine-N(7)-)-me 99.8 6.4E-18 2.2E-22 136.7 16.1 162 13-197 15-177 (213)
14 2frn_A Hypothetical protein PH 99.8 1.4E-17 4.7E-22 140.2 18.5 122 41-195 124-253 (278)
15 3e05_A Precorrin-6Y C5,15-meth 99.8 1.6E-17 5.6E-22 133.1 18.0 135 25-192 26-161 (204)
16 3dmg_A Probable ribosomal RNA 99.8 7.7E-18 2.6E-22 147.5 17.2 143 10-177 199-344 (381)
17 2fhp_A Methylase, putative; al 99.8 9.8E-18 3.3E-22 132.1 15.2 135 13-177 18-158 (187)
18 2ift_A Putative methylase HI07 99.8 8.6E-18 2.9E-22 134.7 14.9 130 17-177 32-167 (201)
19 4dcm_A Ribosomal RNA large sub 99.8 5.7E-18 2E-22 148.2 14.9 142 11-179 195-340 (375)
20 3njr_A Precorrin-6Y methylase; 99.8 5.1E-17 1.7E-21 130.6 19.3 136 25-197 41-178 (204)
21 3mti_A RRNA methylase; SAM-dep 99.8 4.2E-17 1.4E-21 128.6 18.4 116 41-175 21-137 (185)
22 1dus_A MJ0882; hypothetical pr 99.8 9.4E-18 3.2E-22 132.6 14.7 146 11-189 25-173 (194)
23 2nxc_A L11 mtase, ribosomal pr 99.8 5.2E-17 1.8E-21 134.9 19.7 137 24-198 107-243 (254)
24 2esr_A Methyltransferase; stru 99.8 8E-18 2.7E-22 131.8 13.6 133 15-177 6-142 (177)
25 3grz_A L11 mtase, ribosomal pr 99.8 4.2E-17 1.4E-21 130.8 18.0 125 41-198 59-184 (205)
26 3g89_A Ribosomal RNA small sub 99.8 7E-17 2.4E-21 133.7 19.4 161 24-213 59-228 (249)
27 1jsx_A Glucose-inhibited divis 99.8 1.2E-17 4.1E-22 134.0 14.3 140 21-195 44-184 (207)
28 1xdz_A Methyltransferase GIDB; 99.8 9.6E-17 3.3E-21 132.0 19.9 149 19-197 44-200 (240)
29 3f4k_A Putative methyltransfer 99.8 7.1E-17 2.4E-21 133.7 18.5 146 22-198 28-195 (257)
30 1ws6_A Methyltransferase; stru 99.7 1.4E-17 4.8E-22 129.3 13.0 135 11-178 14-152 (171)
31 3eey_A Putative rRNA methylase 99.7 1.4E-16 4.9E-21 126.8 18.9 158 41-214 21-190 (197)
32 4df3_A Fibrillarin-like rRNA/T 99.7 1.1E-16 3.8E-21 130.4 18.5 169 13-208 47-227 (233)
33 3dh0_A SAM dependent methyltra 99.7 1E-16 3.5E-21 129.6 18.3 144 41-213 36-192 (219)
34 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.9E-17 6.5E-22 134.5 13.5 130 41-189 33-166 (218)
35 3h2b_A SAM-dependent methyltra 99.7 3.5E-16 1.2E-20 125.0 20.6 140 42-213 41-195 (203)
36 1l3i_A Precorrin-6Y methyltran 99.7 7.4E-17 2.5E-21 127.2 16.4 141 20-195 14-156 (192)
37 4dmg_A Putative uncharacterize 99.7 4.7E-17 1.6E-21 143.0 16.6 139 41-198 213-356 (393)
38 3tm4_A TRNA (guanine N2-)-meth 99.7 1.9E-16 6.6E-21 138.5 20.4 162 24-213 203-366 (373)
39 3jwg_A HEN1, methyltransferase 99.7 4.9E-17 1.7E-21 131.6 15.4 155 15-197 4-190 (219)
40 3kr9_A SAM-dependent methyltra 99.7 1.2E-16 4.1E-21 129.6 17.2 142 41-213 14-157 (225)
41 2f8l_A Hypothetical protein LM 99.7 7.3E-17 2.5E-21 139.7 16.9 166 17-193 108-280 (344)
42 1pjz_A Thiopurine S-methyltran 99.7 1E-17 3.6E-22 134.4 10.7 130 41-197 21-174 (203)
43 3lec_A NADB-rossmann superfami 99.7 1.4E-16 4.7E-21 129.5 17.0 143 41-214 20-164 (230)
44 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.8E-17 2E-21 126.7 14.1 138 25-195 11-149 (178)
45 1nkv_A Hypothetical protein YJ 99.7 1E-16 3.5E-21 132.6 16.3 144 21-196 18-184 (256)
46 2pjd_A Ribosomal RNA small sub 99.7 7.1E-17 2.4E-21 139.8 15.9 140 12-179 170-309 (343)
47 2igt_A SAM dependent methyltra 99.7 1.2E-16 4.3E-21 137.5 17.2 152 23-193 136-298 (332)
48 1o54_A SAM-dependent O-methylt 99.7 3.2E-17 1.1E-21 137.7 13.3 156 12-199 68-239 (277)
49 2fpo_A Methylase YHHF; structu 99.7 5.7E-17 2E-21 130.0 14.1 128 19-176 33-163 (202)
50 2yxd_A Probable cobalt-precorr 99.7 3.4E-16 1.2E-20 122.5 18.2 136 23-197 19-155 (183)
51 3dtn_A Putative methyltransfer 99.7 9.9E-17 3.4E-21 131.0 15.5 146 27-201 31-216 (234)
52 3kkz_A Uncharacterized protein 99.7 1.5E-16 5.2E-21 132.7 16.7 144 24-198 30-195 (267)
53 1o9g_A RRNA methyltransferase; 99.7 4.9E-17 1.7E-21 134.6 13.6 133 26-175 38-216 (250)
54 3jwh_A HEN1; methyltransferase 99.7 8.4E-17 2.9E-21 130.1 14.1 124 22-173 12-141 (217)
55 4fsd_A Arsenic methyltransfera 99.7 4E-17 1.4E-21 143.4 12.7 132 41-196 82-248 (383)
56 3k6r_A Putative transferase PH 99.7 2.6E-16 8.9E-21 131.7 17.0 146 11-196 101-254 (278)
57 3a27_A TYW2, uncharacterized p 99.7 1.6E-16 5.4E-21 133.3 15.4 104 41-176 118-222 (272)
58 3gnl_A Uncharacterized protein 99.7 3.1E-16 1.1E-20 128.4 16.7 143 41-214 20-164 (244)
59 3dli_A Methyltransferase; PSI- 99.7 1.9E-16 6.5E-21 130.0 15.6 140 24-197 25-182 (240)
60 3mb5_A SAM-dependent methyltra 99.7 8.6E-17 2.9E-21 133.2 13.6 127 41-199 92-222 (255)
61 1wy7_A Hypothetical protein PH 99.7 2.8E-16 9.5E-21 126.1 16.1 142 25-197 32-173 (207)
62 3e23_A Uncharacterized protein 99.7 6.5E-16 2.2E-20 124.3 18.2 124 41-197 42-180 (211)
63 3dlc_A Putative S-adenosyl-L-m 99.7 1.5E-16 5E-21 128.2 14.4 144 24-199 29-203 (219)
64 1ixk_A Methyltransferase; open 99.7 7.2E-16 2.5E-20 131.9 19.4 145 41-193 117-269 (315)
65 3m4x_A NOL1/NOP2/SUN family pr 99.7 8.7E-16 3E-20 136.9 19.9 188 16-216 85-305 (456)
66 3mgg_A Methyltransferase; NYSG 99.7 3.3E-16 1.1E-20 131.1 16.3 130 41-197 36-196 (276)
67 1nt2_A Fibrillarin-like PRE-rR 99.7 2.4E-15 8.2E-20 121.3 20.5 145 25-199 41-195 (210)
68 2ex4_A Adrenal gland protein A 99.7 1.3E-16 4.3E-21 131.2 13.1 133 42-200 79-226 (241)
69 2p7i_A Hypothetical protein; p 99.7 1.6E-16 5.6E-21 130.4 13.8 136 27-197 29-197 (250)
70 1vl5_A Unknown conserved prote 99.7 3.1E-16 1.1E-20 130.2 15.6 128 41-197 36-188 (260)
71 1ve3_A Hypothetical protein PH 99.7 3.6E-16 1.2E-20 126.8 15.7 107 42-175 38-144 (227)
72 4htf_A S-adenosylmethionine-de 99.7 7.7E-16 2.6E-20 129.6 18.1 129 42-198 68-231 (285)
73 3ocj_A Putative exported prote 99.7 2.9E-16 1E-20 133.6 15.7 137 41-201 117-293 (305)
74 3g5l_A Putative S-adenosylmeth 99.7 8.1E-16 2.8E-20 127.1 17.8 129 40-198 42-215 (253)
75 3bus_A REBM, methyltransferase 99.7 9.7E-16 3.3E-20 128.0 18.4 143 25-198 47-215 (273)
76 3c0k_A UPF0064 protein YCCW; P 99.7 6.8E-16 2.3E-20 136.1 17.9 140 42-198 220-369 (396)
77 1wxx_A TT1595, hypothetical pr 99.7 3.5E-16 1.2E-20 137.3 15.7 138 42-197 209-354 (382)
78 3hem_A Cyclopropane-fatty-acyl 99.7 1.3E-15 4.3E-20 129.4 18.6 114 41-176 71-186 (302)
79 1yb2_A Hypothetical protein TA 99.7 2.1E-16 7.2E-21 132.6 13.4 125 41-197 109-235 (275)
80 2ipx_A RRNA 2'-O-methyltransfe 99.7 9E-16 3.1E-20 125.5 16.8 132 40-199 75-217 (233)
81 1sqg_A SUN protein, FMU protei 99.7 1.4E-15 4.9E-20 135.4 19.4 145 41-192 245-397 (429)
82 3m6w_A RRNA methylase; rRNA me 99.7 2.3E-15 7.7E-20 134.4 20.6 188 16-216 81-302 (464)
83 3ajd_A Putative methyltransfer 99.7 5.2E-16 1.8E-20 130.2 15.6 143 41-189 82-230 (274)
84 3hnr_A Probable methyltransfer 99.7 6E-16 2.1E-20 125.1 15.4 141 41-216 44-214 (220)
85 1uwv_A 23S rRNA (uracil-5-)-me 99.7 5.9E-16 2E-20 138.0 16.6 152 11-197 256-412 (433)
86 1y8c_A S-adenosylmethionine-de 99.7 1E-15 3.5E-20 125.5 16.7 122 24-173 20-142 (246)
87 3gu3_A Methyltransferase; alph 99.7 4.2E-16 1.4E-20 131.3 14.7 121 25-175 7-128 (284)
88 3ujc_A Phosphoethanolamine N-m 99.7 2.4E-16 8.4E-21 130.8 13.1 144 25-198 41-205 (266)
89 1fbn_A MJ fibrillarin homologu 99.7 1.6E-15 5.6E-20 123.8 17.7 159 25-213 57-227 (230)
90 2b78_A Hypothetical protein SM 99.7 5.6E-16 1.9E-20 136.1 15.6 120 42-178 212-336 (385)
91 3id6_C Fibrillarin-like rRNA/T 99.7 6.5E-15 2.2E-19 120.2 20.8 159 24-209 58-227 (232)
92 2okc_A Type I restriction enzy 99.7 1.2E-16 4E-21 143.1 11.2 186 16-215 152-358 (445)
93 3dr5_A Putative O-methyltransf 99.7 6.3E-16 2.2E-20 125.7 14.4 122 20-171 37-161 (221)
94 2gb4_A Thiopurine S-methyltran 99.7 9.1E-16 3.1E-20 127.2 15.6 129 41-196 67-224 (252)
95 1xtp_A LMAJ004091AAA; SGPP, st 99.7 7.8E-16 2.7E-20 127.0 15.2 134 40-200 91-239 (254)
96 2o57_A Putative sarcosine dime 99.7 1.3E-15 4.4E-20 128.9 16.7 146 25-198 64-233 (297)
97 2ih2_A Modification methylase 99.7 3.3E-16 1.1E-20 138.9 13.5 178 15-215 19-212 (421)
98 2yxl_A PH0851 protein, 450AA l 99.7 2.4E-15 8.1E-20 134.7 18.8 147 41-193 258-413 (450)
99 3vc1_A Geranyl diphosphate 2-C 99.7 1.2E-15 4.2E-20 130.2 16.0 129 41-198 116-268 (312)
100 3sm3_A SAM-dependent methyltra 99.7 5.9E-16 2E-20 126.1 13.4 131 41-197 29-205 (235)
101 3m33_A Uncharacterized protein 99.7 5.2E-16 1.8E-20 126.4 13.0 139 16-197 26-165 (226)
102 3orh_A Guanidinoacetate N-meth 99.7 2E-16 6.8E-21 129.9 10.5 112 41-173 59-170 (236)
103 3lcc_A Putative methyl chlorid 99.7 4.1E-16 1.4E-20 127.6 12.3 130 42-199 66-207 (235)
104 3ou2_A SAM-dependent methyltra 99.7 1.3E-15 4.5E-20 122.7 15.1 125 41-197 45-203 (218)
105 1xxl_A YCGJ protein; structura 99.7 1.9E-15 6.6E-20 124.0 16.3 105 41-174 20-125 (239)
106 3l8d_A Methyltransferase; stru 99.7 1.9E-15 6.6E-20 123.8 16.2 136 26-197 42-198 (242)
107 3u81_A Catechol O-methyltransf 99.7 1.5E-15 5.1E-20 123.3 15.2 124 42-190 58-187 (221)
108 2qm3_A Predicted methyltransfe 99.7 2E-15 7E-20 132.0 17.1 130 41-197 171-307 (373)
109 2pwy_A TRNA (adenine-N(1)-)-me 99.7 8.6E-16 2.9E-20 127.2 13.9 126 41-197 95-222 (258)
110 2xvm_A Tellurite resistance pr 99.7 2E-15 7E-20 119.8 15.6 126 41-196 31-170 (199)
111 3lkd_A Type I restriction-modi 99.7 9.8E-16 3.4E-20 139.5 15.2 171 15-192 197-382 (542)
112 2yx1_A Hypothetical protein MJ 99.7 9.1E-16 3.1E-20 132.4 14.3 115 41-193 194-311 (336)
113 2as0_A Hypothetical protein PH 99.7 9.3E-16 3.2E-20 135.2 14.7 121 41-178 216-340 (396)
114 2a14_A Indolethylamine N-methy 99.7 8.5E-16 2.9E-20 128.1 13.5 166 27-214 37-260 (263)
115 3g2m_A PCZA361.24; SAM-depende 99.7 1.7E-15 5.7E-20 128.5 15.5 119 25-175 69-192 (299)
116 1kpg_A CFA synthase;, cyclopro 99.7 4.7E-15 1.6E-19 124.8 18.0 106 41-175 63-170 (287)
117 3m70_A Tellurite resistance pr 99.7 1.6E-15 5.4E-20 127.7 15.0 106 41-174 119-224 (286)
118 3khk_A Type I restriction-modi 99.7 1.9E-16 6.6E-21 144.4 10.0 167 15-192 225-420 (544)
119 3bt7_A TRNA (uracil-5-)-methyl 99.7 6E-16 2E-20 135.2 12.6 129 11-176 184-329 (369)
120 1g8a_A Fibrillarin-like PRE-rR 99.7 1.2E-14 3.9E-19 118.3 19.4 124 24-174 55-179 (227)
121 3v97_A Ribosomal RNA large sub 99.7 1.6E-15 5.4E-20 142.4 16.0 138 42-196 539-679 (703)
122 3ldg_A Putative uncharacterize 99.7 3.3E-15 1.1E-19 130.7 16.9 130 22-174 177-344 (384)
123 3bzb_A Uncharacterized protein 99.7 4.1E-15 1.4E-19 125.2 16.7 146 22-197 62-235 (281)
124 2aot_A HMT, histamine N-methyl 99.7 3.2E-15 1.1E-19 126.4 16.0 133 41-194 51-216 (292)
125 3ckk_A TRNA (guanine-N(7)-)-me 99.7 8.2E-16 2.8E-20 126.2 11.9 131 41-190 45-185 (235)
126 3ofk_A Nodulation protein S; N 99.6 4.7E-15 1.6E-19 119.5 16.0 106 41-174 50-155 (216)
127 3g5t_A Trans-aconitate 3-methy 99.6 1.5E-15 5.2E-20 128.8 13.6 119 24-173 22-149 (299)
128 3e8s_A Putative SAM dependent 99.6 7.1E-15 2.4E-19 118.9 16.8 125 41-198 51-208 (227)
129 2fk8_A Methoxy mycolic acid sy 99.6 4.3E-15 1.5E-19 127.0 16.1 108 41-177 89-198 (318)
130 4hg2_A Methyltransferase type 99.6 1.1E-15 3.7E-20 127.0 11.9 114 24-177 26-139 (257)
131 3ldu_A Putative methylase; str 99.6 2.8E-15 9.6E-20 131.5 14.9 129 24-175 180-346 (385)
132 2ar0_A M.ecoki, type I restric 99.6 2.8E-15 9.7E-20 136.8 15.5 161 15-190 149-334 (541)
133 3pfg_A N-methyltransferase; N, 99.6 2.1E-15 7.3E-20 125.3 13.5 100 42-172 50-150 (263)
134 3ntv_A MW1564 protein; rossman 99.6 2.7E-15 9.2E-20 122.8 13.8 102 42-171 71-174 (232)
135 3k0b_A Predicted N6-adenine-sp 99.6 3.2E-15 1.1E-19 131.4 15.1 130 22-174 184-351 (393)
136 3cgg_A SAM-dependent methyltra 99.6 9.3E-15 3.2E-19 115.3 16.4 129 41-199 45-175 (195)
137 2frx_A Hypothetical protein YE 99.6 2.3E-14 7.9E-19 128.8 20.8 168 42-216 117-313 (479)
138 3d2l_A SAM-dependent methyltra 99.6 1.5E-14 5.3E-19 118.4 18.1 115 25-172 21-136 (243)
139 3bkw_A MLL3908 protein, S-aden 99.6 4.7E-15 1.6E-19 121.5 14.8 128 41-198 42-213 (243)
140 3gdh_A Trimethylguanosine synt 99.6 5.4E-15 1.9E-19 121.3 15.2 80 42-130 78-159 (241)
141 2p35_A Trans-aconitate 2-methy 99.6 6.8E-15 2.3E-19 121.7 15.6 115 26-175 20-134 (259)
142 3bwc_A Spermidine synthase; SA 99.6 1.1E-14 3.9E-19 123.8 17.3 138 41-199 94-240 (304)
143 2kw5_A SLR1183 protein; struct 99.6 4E-15 1.4E-19 118.7 13.6 124 42-197 30-169 (202)
144 3tr6_A O-methyltransferase; ce 99.6 3.2E-15 1.1E-19 121.4 13.2 104 42-173 64-174 (225)
145 1i9g_A Hypothetical protein RV 99.6 4.3E-15 1.5E-19 124.6 14.3 125 41-196 98-227 (280)
146 3duw_A OMT, O-methyltransferas 99.6 1E-14 3.5E-19 118.3 16.0 104 42-173 58-167 (223)
147 2vdv_E TRNA (guanine-N(7)-)-me 99.6 4.5E-15 1.6E-19 122.4 14.1 131 42-191 49-191 (246)
148 2pxx_A Uncharacterized protein 99.6 2.6E-15 8.8E-20 120.6 12.3 168 25-213 30-197 (215)
149 2yvl_A TRMI protein, hypotheti 99.6 1.8E-15 6.2E-20 124.5 11.6 144 15-193 51-209 (248)
150 1zx0_A Guanidinoacetate N-meth 99.6 1E-15 3.5E-20 125.4 10.0 130 41-192 59-203 (236)
151 3i9f_A Putative type 11 methyl 99.6 7E-15 2.4E-19 114.1 14.2 134 41-215 16-161 (170)
152 3tfw_A Putative O-methyltransf 99.6 2E-14 6.9E-19 118.8 17.3 106 41-174 62-171 (248)
153 1ri5_A MRNA capping enzyme; me 99.6 5.2E-15 1.8E-19 124.9 14.0 112 41-175 63-176 (298)
154 1sui_A Caffeoyl-COA O-methyltr 99.6 7.3E-15 2.5E-19 121.4 14.5 104 42-172 79-189 (247)
155 1qzz_A RDMB, aclacinomycin-10- 99.6 2E-14 6.8E-19 125.5 17.5 147 41-215 181-357 (374)
156 2b25_A Hypothetical protein; s 99.6 6.5E-15 2.2E-19 127.0 13.8 120 41-189 104-235 (336)
157 3gwz_A MMCR; methyltransferase 99.6 5.3E-14 1.8E-18 122.9 19.6 142 41-212 201-367 (369)
158 3uwp_A Histone-lysine N-methyl 99.6 7.2E-15 2.5E-19 128.1 13.9 129 14-173 150-288 (438)
159 1wzn_A SAM-dependent methyltra 99.6 7.8E-15 2.7E-19 121.0 13.6 120 29-175 28-147 (252)
160 3gjy_A Spermidine synthase; AP 99.6 2.7E-14 9.2E-19 121.3 17.1 133 44-198 91-227 (317)
161 1ne2_A Hypothetical protein TA 99.6 1.2E-14 4.2E-19 115.9 14.2 118 41-196 50-167 (200)
162 2p8j_A S-adenosylmethionine-de 99.6 5.9E-15 2E-19 118.2 12.2 109 41-175 22-130 (209)
163 3i53_A O-methyltransferase; CO 99.6 2E-14 7E-19 123.6 16.3 140 42-213 169-331 (332)
164 2gpy_A O-methyltransferase; st 99.6 8.6E-15 3E-19 119.6 13.3 105 41-173 53-160 (233)
165 3thr_A Glycine N-methyltransfe 99.6 1E-14 3.5E-19 123.0 14.0 129 24-175 42-177 (293)
166 3g07_A 7SK snRNA methylphospha 99.6 1E-15 3.5E-20 129.5 7.9 137 42-197 46-267 (292)
167 3iv6_A Putative Zn-dependent a 99.6 5.4E-15 1.8E-19 122.8 11.9 121 27-178 33-153 (261)
168 2jjq_A Uncharacterized RNA met 99.6 2.1E-14 7E-19 127.4 16.2 142 11-196 263-406 (425)
169 3p2e_A 16S rRNA methylase; met 99.6 5.3E-15 1.8E-19 120.6 11.5 135 41-196 23-182 (225)
170 1xj5_A Spermidine synthase 1; 99.6 2E-14 6.7E-19 123.7 15.4 140 11-172 90-234 (334)
171 3c3p_A Methyltransferase; NP_9 99.6 1.1E-14 3.8E-19 117.0 13.1 101 42-172 56-159 (210)
172 3adn_A Spermidine synthase; am 99.6 4.8E-14 1.6E-18 119.3 17.4 161 11-195 53-223 (294)
173 1x19_A CRTF-related protein; m 99.6 5E-14 1.7E-18 122.5 17.9 141 41-213 189-358 (359)
174 2r3s_A Uncharacterized protein 99.6 7.1E-14 2.4E-18 120.1 18.4 133 41-200 164-324 (335)
175 3c3y_A Pfomt, O-methyltransfer 99.6 1.8E-14 6.2E-19 118.2 14.1 104 42-172 70-180 (237)
176 1tw3_A COMT, carminomycin 4-O- 99.6 3.9E-14 1.3E-18 123.1 16.9 146 41-214 182-356 (360)
177 3dp7_A SAM-dependent methyltra 99.6 1.9E-14 6.5E-19 125.4 14.8 148 41-215 178-356 (363)
178 3ccf_A Cyclopropane-fatty-acyl 99.6 1.9E-14 6.6E-19 120.6 14.3 102 41-176 56-157 (279)
179 3r3h_A O-methyltransferase, SA 99.6 1.5E-14 5.1E-19 119.2 13.1 105 42-173 60-170 (242)
180 3lbf_A Protein-L-isoaspartate 99.6 7.6E-15 2.6E-19 117.9 11.1 113 25-175 63-176 (210)
181 3bkx_A SAM-dependent methyltra 99.6 3E-14 1E-18 119.0 15.1 111 40-174 41-160 (275)
182 2g72_A Phenylethanolamine N-me 99.6 1.4E-14 4.9E-19 122.1 13.2 134 42-197 71-254 (289)
183 2avd_A Catechol-O-methyltransf 99.6 1.5E-14 5E-19 117.7 12.8 106 41-173 68-179 (229)
184 3v97_A Ribosomal RNA large sub 99.6 7.3E-14 2.5E-18 131.1 19.2 167 21-211 172-378 (703)
185 3ege_A Putative methyltransfer 99.6 7.3E-15 2.5E-19 122.2 10.8 135 25-198 20-177 (261)
186 3b3j_A Histone-arginine methyl 99.6 2E-15 6.9E-20 135.9 7.5 127 14-171 133-261 (480)
187 2dul_A N(2),N(2)-dimethylguano 99.6 2.5E-14 8.6E-19 125.0 14.1 123 15-173 25-164 (378)
188 2pt6_A Spermidine synthase; tr 99.6 2.4E-14 8.3E-19 122.6 13.7 137 11-174 86-231 (321)
189 2b9e_A NOL1/NOP2/SUN domain fa 99.6 1.4E-13 4.7E-18 117.2 18.2 142 41-189 101-253 (309)
190 1ej0_A FTSJ; methyltransferase 99.6 7.8E-14 2.7E-18 108.1 15.3 131 41-195 21-157 (180)
191 3fpf_A Mtnas, putative unchara 99.6 6.3E-14 2.2E-18 117.7 15.6 100 41-173 121-222 (298)
192 3s1s_A Restriction endonucleas 99.6 1.6E-14 5.4E-19 134.5 12.9 173 15-190 295-488 (878)
193 3mcz_A O-methyltransferase; ad 99.6 1.3E-13 4.6E-18 119.4 17.9 142 43-214 180-349 (352)
194 2i62_A Nicotinamide N-methyltr 99.6 1.9E-14 6.5E-19 119.4 12.0 136 41-198 55-238 (265)
195 3cc8_A Putative methyltransfer 99.6 2.4E-14 8.2E-19 116.0 12.4 103 41-176 31-133 (230)
196 1vlm_A SAM-dependent methyltra 99.6 9.2E-14 3.2E-18 112.4 15.3 120 42-200 47-189 (219)
197 3fzg_A 16S rRNA methylase; met 99.6 4.4E-15 1.5E-19 116.3 7.1 115 24-171 36-150 (200)
198 3cbg_A O-methyltransferase; cy 99.6 4.1E-14 1.4E-18 115.7 13.2 105 42-173 72-182 (232)
199 3r0q_C Probable protein argini 99.6 8.2E-15 2.8E-19 128.3 9.5 104 41-172 62-168 (376)
200 2vdw_A Vaccinia virus capping 99.6 2.1E-14 7.1E-19 122.1 11.6 111 42-175 48-171 (302)
201 2fyt_A Protein arginine N-meth 99.6 5.4E-14 1.8E-18 121.5 14.2 103 41-170 63-168 (340)
202 3mq2_A 16S rRNA methyltransfer 99.5 2.5E-14 8.4E-19 115.6 10.5 134 41-197 26-182 (218)
203 3ggd_A SAM-dependent methyltra 99.5 4.7E-14 1.6E-18 115.9 12.3 110 41-177 55-167 (245)
204 2o07_A Spermidine synthase; st 99.5 7.7E-14 2.6E-18 118.6 13.8 111 41-173 94-209 (304)
205 2ip2_A Probable phenazine-spec 99.5 1.2E-13 4.2E-18 118.8 15.1 139 44-213 169-333 (334)
206 2yxe_A Protein-L-isoaspartate 99.5 3.7E-14 1.3E-18 114.2 11.2 116 25-175 63-179 (215)
207 2i7c_A Spermidine synthase; tr 99.5 8.6E-14 2.9E-18 117.2 13.3 112 41-174 77-193 (283)
208 3ufb_A Type I restriction-modi 99.5 7E-14 2.4E-18 127.2 13.5 189 15-215 197-414 (530)
209 2hnk_A SAM-dependent O-methylt 99.5 7.9E-14 2.7E-18 114.4 12.5 106 41-173 59-181 (239)
210 2y1w_A Histone-arginine methyl 99.5 1.3E-13 4.5E-18 119.4 14.4 116 26-172 37-154 (348)
211 1iy9_A Spermidine synthase; ro 99.5 5.8E-13 2E-17 111.7 17.9 133 42-197 75-216 (275)
212 1dl5_A Protein-L-isoaspartate 99.5 3.8E-14 1.3E-18 121.3 10.6 114 26-174 62-176 (317)
213 2yqz_A Hypothetical protein TT 99.5 2.8E-14 9.7E-19 118.1 9.6 103 41-173 38-141 (263)
214 2b2c_A Spermidine synthase; be 99.5 1.2E-13 4E-18 117.9 13.4 110 42-173 108-222 (314)
215 1vbf_A 231AA long hypothetical 99.5 5.2E-14 1.8E-18 114.6 10.7 112 25-175 56-167 (231)
216 3q7e_A Protein arginine N-meth 99.5 7.2E-14 2.5E-18 121.1 12.1 105 41-171 65-171 (349)
217 3bxo_A N,N-dimethyltransferase 99.5 3.4E-13 1.2E-17 110.0 15.6 102 41-173 39-141 (239)
218 2gs9_A Hypothetical protein TT 99.5 1.3E-13 4.4E-18 110.7 12.7 101 42-178 36-137 (211)
219 1inl_A Spermidine synthase; be 99.5 1.9E-13 6.5E-18 115.8 14.1 132 42-195 90-230 (296)
220 2pbf_A Protein-L-isoaspartate 99.5 6.5E-14 2.2E-18 113.8 10.7 108 41-175 79-195 (227)
221 1jg1_A PIMT;, protein-L-isoasp 99.5 6.3E-14 2.1E-18 114.7 10.6 115 25-176 77-192 (235)
222 4e2x_A TCAB9; kijanose, tetron 99.5 1E-13 3.6E-18 122.7 12.8 126 41-199 106-253 (416)
223 1i1n_A Protein-L-isoaspartate 99.5 6.2E-14 2.1E-18 113.8 10.2 103 41-175 76-184 (226)
224 1g6q_1 HnRNP arginine N-methyl 99.5 2.1E-13 7.1E-18 117.2 13.5 104 41-170 37-142 (328)
225 1uir_A Polyamine aminopropyltr 99.5 8.8E-13 3E-17 112.6 17.0 114 41-173 76-195 (314)
226 1u2z_A Histone-lysine N-methyl 99.5 2.5E-13 8.5E-18 120.2 14.0 119 25-172 228-358 (433)
227 3axs_A Probable N(2),N(2)-dime 99.5 3.7E-13 1.3E-17 117.8 14.9 128 15-173 25-158 (392)
228 1mjf_A Spermidine synthase; sp 99.5 3.5E-13 1.2E-17 113.4 14.1 109 41-174 74-194 (281)
229 2plw_A Ribosomal RNA methyltra 99.5 1.2E-12 3.9E-17 104.2 16.4 128 41-194 21-174 (201)
230 3htx_A HEN1; HEN1, small RNA m 99.5 2.3E-13 7.9E-18 127.0 13.5 122 24-174 706-835 (950)
231 2bm8_A Cephalosporin hydroxyla 99.5 8.4E-14 2.9E-18 114.2 9.5 120 42-189 81-207 (236)
232 2avn_A Ubiquinone/menaquinone 99.5 1.2E-13 4E-18 114.7 10.2 101 42-175 54-154 (260)
233 2qe6_A Uncharacterized protein 99.5 1.4E-12 4.8E-17 109.3 16.6 112 42-177 77-200 (274)
234 3bgv_A MRNA CAP guanine-N7 met 99.5 2.4E-13 8.2E-18 115.9 12.1 121 42-187 34-166 (313)
235 2zfu_A Nucleomethylin, cerebra 99.5 6.9E-13 2.4E-17 106.7 14.1 126 41-216 66-193 (215)
236 4a6d_A Hydroxyindole O-methylt 99.5 1.6E-12 5.5E-17 112.8 17.0 145 41-216 178-348 (353)
237 1p91_A Ribosomal RNA large sub 99.5 2E-13 6.8E-18 113.7 10.8 104 41-182 84-187 (269)
238 3dou_A Ribosomal RNA large sub 99.5 4.9E-13 1.7E-17 106.1 12.0 127 41-195 24-160 (191)
239 3lst_A CALO1 methyltransferase 99.5 3.6E-13 1.2E-17 116.6 11.9 127 41-198 183-335 (348)
240 4hc4_A Protein arginine N-meth 99.5 3.6E-13 1.2E-17 117.2 11.5 104 41-171 82-187 (376)
241 2nyu_A Putative ribosomal RNA 99.4 4.2E-12 1.4E-16 100.5 15.7 128 41-189 21-161 (196)
242 1af7_A Chemotaxis receptor met 99.4 6.3E-13 2.2E-17 111.1 11.2 109 42-171 105-250 (274)
243 1r18_A Protein-L-isoaspartate( 99.4 3E-13 1E-17 110.0 8.6 119 26-174 69-195 (227)
244 2qfm_A Spermine synthase; sper 99.4 6.3E-12 2.1E-16 108.1 16.4 130 41-187 187-327 (364)
245 3reo_A (ISO)eugenol O-methyltr 99.4 2.8E-12 9.5E-17 111.9 14.2 136 41-213 202-366 (368)
246 1zq9_A Probable dimethyladenos 99.4 3.2E-13 1.1E-17 113.8 6.8 90 25-127 14-105 (285)
247 2xyq_A Putative 2'-O-methyl tr 99.4 8.9E-12 3E-16 104.8 14.4 143 41-213 62-211 (290)
248 3p9c_A Caffeic acid O-methyltr 99.4 7.7E-12 2.6E-16 108.9 14.4 135 41-212 200-363 (364)
249 3lcv_B Sisomicin-gentamicin re 99.4 9.5E-13 3.2E-17 107.8 7.7 127 41-195 131-268 (281)
250 2h1r_A Dimethyladenosine trans 99.4 8.8E-13 3E-17 111.9 7.5 89 25-126 28-117 (299)
251 1fp1_D Isoliquiritigenin 2'-O- 99.4 5.1E-12 1.7E-16 110.3 12.6 136 41-212 208-371 (372)
252 3opn_A Putative hemolysin; str 99.4 1.9E-12 6.5E-17 105.8 9.1 145 17-197 16-182 (232)
253 3hp7_A Hemolysin, putative; st 99.4 3E-12 1E-16 107.6 10.4 134 29-197 74-230 (291)
254 1fp2_A Isoflavone O-methyltran 99.3 1.1E-11 3.9E-16 107.3 12.2 124 41-198 187-340 (352)
255 3ll7_A Putative methyltransfer 99.3 2.5E-12 8.4E-17 112.9 7.5 81 42-128 93-176 (410)
256 2r6z_A UPF0341 protein in RSP 99.3 1.6E-12 5.4E-17 107.9 5.8 82 41-128 82-174 (258)
257 3gru_A Dimethyladenosine trans 99.3 9.5E-12 3.3E-16 105.0 10.4 90 25-126 36-125 (295)
258 4azs_A Methyltransferase WBDD; 99.3 2.4E-12 8.1E-17 118.5 6.2 109 41-174 65-174 (569)
259 1zg3_A Isoflavanone 4'-O-methy 99.3 2.1E-11 7.1E-16 105.9 11.8 123 42-198 193-346 (358)
260 3giw_A Protein of unknown func 99.3 2.8E-11 9.7E-16 100.5 12.0 115 42-177 78-204 (277)
261 3tqs_A Ribosomal RNA small sub 99.3 3.3E-11 1.1E-15 99.7 12.0 91 25-126 15-107 (255)
262 3sso_A Methyltransferase; macr 99.3 1.6E-11 5.6E-16 106.7 10.4 111 26-173 204-324 (419)
263 2cmg_A Spermidine synthase; tr 99.3 2.2E-11 7.7E-16 101.2 10.6 97 41-174 71-172 (262)
264 1m6y_A S-adenosyl-methyltransf 99.3 1.9E-11 6.4E-16 103.5 9.5 92 27-125 14-108 (301)
265 1yub_A Ermam, rRNA methyltrans 99.3 9.3E-14 3.2E-18 114.6 -4.6 124 28-173 18-145 (245)
266 4fzv_A Putative methyltransfer 99.2 1.6E-10 5.5E-15 99.9 13.7 143 23-177 135-288 (359)
267 2ld4_A Anamorsin; methyltransf 99.2 7.8E-11 2.7E-15 91.7 10.4 109 41-194 11-130 (176)
268 3fut_A Dimethyladenosine trans 99.2 4.4E-11 1.5E-15 99.8 9.3 91 25-128 33-123 (271)
269 1qam_A ERMC' methyltransferase 99.2 1.9E-10 6.5E-15 94.6 12.9 90 25-126 16-105 (244)
270 3frh_A 16S rRNA methylase; met 99.2 1.8E-10 6.1E-15 93.4 11.7 73 41-123 104-176 (253)
271 3ftd_A Dimethyladenosine trans 99.2 2.7E-10 9.2E-15 94.0 11.5 91 25-127 17-107 (249)
272 2wa2_A Non-structural protein 99.2 1.3E-11 4.5E-16 103.3 3.6 108 41-175 81-195 (276)
273 3uzu_A Ribosomal RNA small sub 99.1 4.7E-10 1.6E-14 94.0 12.7 94 25-126 28-125 (279)
274 2oxt_A Nucleoside-2'-O-methylt 99.1 1.5E-11 5.1E-16 102.4 2.8 108 41-175 73-187 (265)
275 2oyr_A UPF0341 protein YHIQ; a 99.1 4.1E-10 1.4E-14 93.2 11.0 77 44-127 90-176 (258)
276 2qy6_A UPF0209 protein YFCK; s 99.1 9.2E-10 3.1E-14 91.1 11.7 134 41-196 59-232 (257)
277 1qyr_A KSGA, high level kasuga 99.1 1.7E-10 5.9E-15 95.2 6.6 93 25-127 7-102 (252)
278 3cvo_A Methyltransferase-like 99.0 5.1E-09 1.8E-13 83.2 13.6 97 42-171 30-152 (202)
279 2p41_A Type II methyltransfera 99.0 3.8E-10 1.3E-14 95.8 6.4 108 41-176 81-194 (305)
280 3o4f_A Spermidine synthase; am 99.0 8E-09 2.8E-13 86.5 14.0 111 41-173 82-198 (294)
281 4gqb_A Protein arginine N-meth 99.0 2.8E-09 9.6E-14 98.1 11.6 106 42-170 357-464 (637)
282 3ua3_A Protein arginine N-meth 98.9 6.2E-09 2.1E-13 96.0 9.5 108 43-170 410-531 (745)
283 2wk1_A NOVP; transferase, O-me 98.8 5.1E-08 1.7E-12 81.4 12.5 130 41-193 105-266 (282)
284 2k4m_A TR8_protein, UPF0146 pr 98.7 3.6E-08 1.2E-12 73.4 7.0 86 14-124 10-99 (153)
285 2oo3_A Protein involved in cat 98.6 5.4E-08 1.9E-12 80.7 5.7 122 42-191 91-218 (283)
286 3c6k_A Spermine synthase; sper 98.6 7.9E-07 2.7E-11 76.8 12.6 117 41-173 204-331 (381)
287 1wg8_A Predicted S-adenosylmet 98.4 6.6E-07 2.3E-11 74.1 8.8 87 27-125 10-99 (285)
288 3evf_A RNA-directed RNA polyme 98.4 2.7E-07 9.3E-12 76.0 5.2 136 41-198 73-211 (277)
289 3vyw_A MNMC2; tRNA wobble urid 98.4 5.8E-06 2E-10 69.4 13.4 136 41-198 95-247 (308)
290 2efj_A 3,7-dimethylxanthine me 98.3 2.1E-05 7.2E-10 68.3 15.3 133 43-178 53-230 (384)
291 2zig_A TTHA0409, putative modi 98.3 3.3E-06 1.1E-10 71.2 9.7 60 24-93 221-280 (297)
292 3gcz_A Polyprotein; flavivirus 98.3 7.2E-07 2.4E-11 73.6 5.0 145 16-189 69-219 (282)
293 2zig_A TTHA0409, putative modi 98.2 1.3E-06 4.6E-11 73.6 6.4 95 98-193 23-130 (297)
294 3b5i_A S-adenosyl-L-methionine 98.2 1.3E-05 4.5E-10 69.4 11.1 135 43-177 53-229 (374)
295 1g55_A DNA cytosine methyltran 98.2 3.8E-05 1.3E-09 66.0 13.7 156 43-214 2-170 (343)
296 1g60_A Adenine-specific methyl 98.1 9.6E-06 3.3E-10 67.0 8.3 62 24-95 198-259 (260)
297 2c7p_A Modification methylase 98.1 0.00018 6.1E-09 61.3 16.2 152 42-213 10-173 (327)
298 3g7u_A Cytosine-specific methy 98.1 0.00021 7.2E-09 62.1 16.4 151 44-214 3-173 (376)
299 3r24_A NSP16, 2'-O-methyl tran 98.0 0.00014 4.9E-09 60.1 13.7 137 29-197 94-239 (344)
300 4auk_A Ribosomal RNA large sub 98.0 0.00022 7.7E-09 61.3 15.1 70 41-124 210-279 (375)
301 3eld_A Methyltransferase; flav 97.9 1.8E-05 6.2E-10 65.7 7.2 145 16-189 60-209 (300)
302 1i4w_A Mitochondrial replicati 97.9 7.3E-05 2.5E-09 64.3 10.2 76 25-107 38-117 (353)
303 3tka_A Ribosomal RNA small sub 97.8 3E-05 1E-09 65.7 6.9 89 28-125 46-138 (347)
304 1boo_A Protein (N-4 cytosine-s 97.8 7.7E-05 2.7E-09 63.5 9.2 89 98-193 16-114 (323)
305 1g60_A Adenine-specific methyl 97.8 4.2E-05 1.5E-09 63.0 6.9 94 98-199 6-101 (260)
306 1m6e_X S-adenosyl-L-methionnin 97.8 3.9E-05 1.3E-09 66.1 6.8 135 42-176 51-212 (359)
307 3qv2_A 5-cytosine DNA methyltr 97.7 0.0006 2.1E-08 58.0 13.6 155 42-214 9-181 (327)
308 3p8z_A Mtase, non-structural p 97.7 0.00012 4.1E-09 58.7 7.3 126 16-171 57-184 (267)
309 2px2_A Genome polyprotein [con 97.6 0.00011 3.8E-09 59.7 6.9 107 41-174 72-184 (269)
310 1eg2_A Modification methylase 97.6 0.00041 1.4E-08 58.9 10.5 92 98-199 40-142 (319)
311 3pvc_A TRNA 5-methylaminomethy 97.5 0.0009 3.1E-08 62.7 12.9 135 41-197 57-231 (689)
312 4h0n_A DNMT2; SAH binding, tra 97.5 0.0028 9.7E-08 54.0 14.5 153 44-214 4-170 (333)
313 3ubt_Y Modification methylase 97.5 0.0026 8.8E-08 54.0 14.0 149 45-214 2-164 (331)
314 3lkz_A Non-structural protein 97.5 0.00057 1.9E-08 56.6 9.0 127 16-171 73-202 (321)
315 1boo_A Protein (N-4 cytosine-s 97.5 6E-05 2.1E-09 64.2 3.4 73 25-107 239-311 (323)
316 3ps9_A TRNA 5-methylaminomethy 97.4 0.0011 3.9E-08 61.8 11.2 135 41-197 65-239 (676)
317 2qrv_A DNA (cytosine-5)-methyl 97.3 0.00052 1.8E-08 57.6 7.3 82 41-130 14-98 (295)
318 1eg2_A Modification methylase 97.2 0.00093 3.2E-08 56.7 7.7 65 20-94 224-291 (319)
319 1f8f_A Benzyl alcohol dehydrog 97.0 0.0028 9.5E-08 54.7 8.6 96 41-173 189-289 (371)
320 3s2e_A Zinc-containing alcohol 96.8 0.0038 1.3E-07 53.1 7.8 95 41-173 165-263 (340)
321 1pl8_A Human sorbitol dehydrog 96.7 0.012 4.2E-07 50.3 10.7 96 41-173 170-273 (356)
322 4dkj_A Cytosine-specific methy 96.7 0.076 2.6E-06 46.3 15.3 166 43-214 10-239 (403)
323 4ej6_A Putative zinc-binding d 96.6 0.0061 2.1E-07 52.6 8.1 96 41-173 181-284 (370)
324 4dcm_A Ribosomal RNA large sub 96.6 0.031 1.1E-06 48.3 12.4 114 42-189 38-152 (375)
325 2py6_A Methyltransferase FKBM; 96.5 0.0083 2.8E-07 52.6 8.5 49 41-92 225-274 (409)
326 3swr_A DNA (cytosine-5)-methyl 96.4 0.16 5.4E-06 49.3 17.1 159 41-213 538-722 (1002)
327 2h6e_A ADH-4, D-arabinose 1-de 96.4 0.016 5.5E-07 49.3 9.3 97 42-173 170-269 (344)
328 3me5_A Cytosine-specific methy 96.4 0.04 1.4E-06 49.2 11.9 164 43-214 88-289 (482)
329 2dph_A Formaldehyde dismutase; 96.3 0.0053 1.8E-07 53.5 5.9 109 41-173 184-299 (398)
330 1pqw_A Polyketide synthase; ro 96.3 0.01 3.5E-07 46.1 6.9 97 41-173 37-137 (198)
331 1e3j_A NADP(H)-dependent ketos 96.3 0.016 5.6E-07 49.4 8.7 96 41-173 167-271 (352)
332 3jv7_A ADH-A; dehydrogenase, n 96.3 0.015 5E-07 49.5 8.3 97 41-173 170-270 (345)
333 1v3u_A Leukotriene B4 12- hydr 96.2 0.016 5.4E-07 49.1 8.4 97 41-173 144-244 (333)
334 3fpc_A NADP-dependent alcohol 96.2 0.0078 2.7E-07 51.4 6.1 96 41-173 165-266 (352)
335 1cdo_A Alcohol dehydrogenase; 96.1 0.026 9.1E-07 48.5 9.3 96 41-173 191-294 (374)
336 1p0f_A NADP-dependent alcohol 96.1 0.03 1E-06 48.1 9.5 96 41-173 190-293 (373)
337 3tos_A CALS11; methyltransfera 96.0 0.08 2.7E-06 43.2 11.2 108 41-171 68-215 (257)
338 2hcy_A Alcohol dehydrogenase 1 96.0 0.014 4.7E-07 49.7 7.0 96 41-173 168-269 (347)
339 4b7c_A Probable oxidoreductase 96.0 0.019 6.5E-07 48.6 7.7 96 41-173 148-248 (336)
340 1rjw_A ADH-HT, alcohol dehydro 95.9 0.024 8.1E-07 48.1 8.1 95 41-173 163-261 (339)
341 2jhf_A Alcohol dehydrogenase E 95.9 0.038 1.3E-06 47.5 9.4 96 41-173 190-293 (374)
342 3fwz_A Inner membrane protein 95.9 0.22 7.7E-06 36.2 12.4 114 43-194 7-122 (140)
343 3m6i_A L-arabinitol 4-dehydrog 95.9 0.019 6.6E-07 49.2 7.4 98 41-173 178-283 (363)
344 2fzw_A Alcohol dehydrogenase c 95.9 0.015 5.1E-07 50.1 6.6 96 41-173 189-292 (373)
345 1jvb_A NAD(H)-dependent alcoho 95.9 0.017 5.9E-07 49.1 7.0 99 41-173 169-271 (347)
346 3uko_A Alcohol dehydrogenase c 95.8 0.021 7.3E-07 49.2 7.5 96 41-173 192-295 (378)
347 3uog_A Alcohol dehydrogenase; 95.8 0.039 1.3E-06 47.3 9.0 95 41-173 188-287 (363)
348 1uuf_A YAHK, zinc-type alcohol 95.8 0.02 7E-07 49.2 7.3 95 41-173 193-288 (369)
349 4ft4_B DNA (cytosine-5)-methyl 95.8 0.43 1.5E-05 45.2 17.0 50 41-90 210-260 (784)
350 1e3i_A Alcohol dehydrogenase, 95.8 0.044 1.5E-06 47.2 9.3 96 41-173 194-297 (376)
351 4dvj_A Putative zinc-dependent 95.8 0.03 1E-06 48.0 8.2 95 42-172 171-269 (363)
352 3gms_A Putative NADPH:quinone 95.7 0.018 6.2E-07 48.9 6.5 95 41-173 143-243 (340)
353 2j3h_A NADP-dependent oxidored 95.7 0.027 9.3E-07 47.8 7.6 96 41-173 154-255 (345)
354 3fbg_A Putative arginate lyase 95.7 0.052 1.8E-06 46.2 9.2 94 42-172 150-247 (346)
355 3two_A Mannitol dehydrogenase; 95.7 0.019 6.5E-07 48.9 6.3 91 40-173 174-265 (348)
356 2c0c_A Zinc binding alcohol de 95.6 0.041 1.4E-06 47.1 8.4 95 41-173 162-261 (362)
357 2vz8_A Fatty acid synthase; tr 95.5 0.0042 1.4E-07 65.9 1.9 108 41-173 1239-1348(2512)
358 1kol_A Formaldehyde dehydrogen 95.4 0.05 1.7E-06 47.2 8.1 110 41-173 184-300 (398)
359 2d8a_A PH0655, probable L-thre 95.3 0.037 1.3E-06 47.0 6.8 96 42-173 167-267 (348)
360 1zkd_A DUF185; NESG, RPR58, st 95.3 0.071 2.4E-06 46.2 8.5 75 16-90 50-131 (387)
361 3av4_A DNA (cytosine-5)-methyl 95.2 0.63 2.1E-05 46.5 16.1 157 42-212 850-1032(1330)
362 1vj0_A Alcohol dehydrogenase, 95.2 0.035 1.2E-06 47.9 6.4 96 41-173 194-298 (380)
363 4eez_A Alcohol dehydrogenase 1 95.1 0.14 4.6E-06 43.4 10.0 99 40-173 161-263 (348)
364 4eye_A Probable oxidoreductase 95.1 0.028 9.6E-07 47.8 5.6 95 41-173 158-257 (342)
365 1rjd_A PPM1P, carboxy methyl t 95.0 0.42 1.5E-05 40.5 12.7 108 41-173 96-232 (334)
366 4dup_A Quinone oxidoreductase; 95.0 0.051 1.8E-06 46.3 6.8 95 41-173 166-265 (353)
367 2eih_A Alcohol dehydrogenase; 95.0 0.064 2.2E-06 45.5 7.4 95 41-173 165-265 (343)
368 1wma_A Carbonyl reductase [NAD 94.9 0.21 7.1E-06 40.3 10.1 127 42-173 3-138 (276)
369 3ip1_A Alcohol dehydrogenase, 94.8 0.16 5.5E-06 44.1 9.8 72 41-122 212-289 (404)
370 3nx4_A Putative oxidoreductase 94.8 0.1 3.5E-06 43.7 8.2 91 45-173 149-241 (324)
371 2b5w_A Glucose dehydrogenase; 94.8 0.087 3E-06 44.9 7.7 92 44-173 174-273 (357)
372 1yb5_A Quinone oxidoreductase; 94.8 0.08 2.7E-06 45.1 7.5 95 41-173 169-269 (351)
373 3jyn_A Quinone oxidoreductase; 94.7 0.054 1.9E-06 45.6 6.3 95 41-173 139-239 (325)
374 3qwb_A Probable quinone oxidor 94.7 0.068 2.3E-06 45.1 6.8 95 41-173 147-247 (334)
375 2zb4_A Prostaglandin reductase 94.6 0.1 3.5E-06 44.5 7.7 98 41-173 157-260 (357)
376 1piw_A Hypothetical zinc-type 94.4 0.051 1.8E-06 46.4 5.5 97 41-173 178-276 (360)
377 1qor_A Quinone oxidoreductase; 94.3 0.079 2.7E-06 44.5 6.4 95 41-173 139-239 (327)
378 2dq4_A L-threonine 3-dehydroge 94.1 0.029 9.9E-07 47.6 3.3 94 42-173 164-262 (343)
379 3iht_A S-adenosyl-L-methionine 94.1 0.28 9.5E-06 36.6 8.0 116 25-171 27-145 (174)
380 4da9_A Short-chain dehydrogena 94.0 1.1 3.9E-05 36.5 12.6 103 18-125 6-117 (280)
381 3llv_A Exopolyphosphatase-rela 93.8 0.73 2.5E-05 33.2 10.1 72 43-124 6-79 (141)
382 2j8z_A Quinone oxidoreductase; 93.8 0.16 5.4E-06 43.3 7.3 97 41-173 161-261 (354)
383 1wly_A CAAR, 2-haloacrylate re 93.8 0.15 5.1E-06 42.9 7.1 95 41-173 144-244 (333)
384 3pxx_A Carveol dehydrogenase; 93.8 0.88 3E-05 37.0 11.6 125 42-173 9-153 (287)
385 1iz0_A Quinone oxidoreductase; 93.6 0.18 6.1E-06 41.8 7.1 92 41-173 124-218 (302)
386 3gqv_A Enoyl reductase; medium 93.5 0.27 9.4E-06 42.1 8.4 95 41-173 163-263 (371)
387 4a2c_A Galactitol-1-phosphate 93.5 0.37 1.3E-05 40.6 9.0 98 41-174 159-261 (346)
388 3sx2_A Putative 3-ketoacyl-(ac 93.4 0.78 2.7E-05 37.2 10.7 82 42-126 12-113 (278)
389 3oig_A Enoyl-[acyl-carrier-pro 93.4 0.63 2.2E-05 37.5 10.0 128 42-174 6-148 (266)
390 2cdc_A Glucose dehydrogenase g 93.3 0.12 4.2E-06 44.2 5.8 94 43-174 181-279 (366)
391 1xa0_A Putative NADPH dependen 93.3 0.12 4.1E-06 43.4 5.6 95 41-173 147-246 (328)
392 3ek2_A Enoyl-(acyl-carrier-pro 93.2 0.96 3.3E-05 36.4 10.8 127 41-173 12-153 (271)
393 3gaf_A 7-alpha-hydroxysteroid 93.1 0.81 2.8E-05 36.8 10.3 82 42-126 11-100 (256)
394 2uyo_A Hypothetical protein ML 93.0 2.2 7.5E-05 35.6 13.0 109 42-176 102-221 (310)
395 1fmc_A 7 alpha-hydroxysteroid 93.0 1 3.4E-05 35.8 10.6 82 42-126 10-99 (255)
396 3grk_A Enoyl-(acyl-carrier-pro 92.9 1.1 3.7E-05 36.9 10.9 127 42-174 30-170 (293)
397 4fs3_A Enoyl-[acyl-carrier-pro 92.9 0.74 2.5E-05 37.1 9.7 84 41-126 4-97 (256)
398 2hwk_A Helicase NSP2; rossman 92.8 0.22 7.4E-06 41.0 6.1 60 155-215 236-300 (320)
399 3tjr_A Short chain dehydrogena 92.7 1.1 3.6E-05 37.1 10.5 82 42-126 30-119 (301)
400 4eso_A Putative oxidoreductase 92.7 1.1 3.8E-05 36.0 10.4 123 42-173 7-138 (255)
401 3goh_A Alcohol dehydrogenase, 92.6 0.21 7.2E-06 41.6 6.1 89 40-173 140-229 (315)
402 3c85_A Putative glutathione-re 92.3 1.8 6.2E-05 32.6 10.8 73 43-124 39-114 (183)
403 1xu9_A Corticosteroid 11-beta- 92.3 1.4 4.7E-05 35.9 10.7 78 42-122 27-113 (286)
404 1tt7_A YHFP; alcohol dehydroge 92.3 0.18 6E-06 42.4 5.3 95 41-173 148-247 (330)
405 3krt_A Crotonyl COA reductase; 92.2 0.94 3.2E-05 39.9 10.1 95 41-173 227-344 (456)
406 4f3n_A Uncharacterized ACR, CO 92.2 0.19 6.4E-06 44.1 5.3 77 16-92 109-188 (432)
407 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.1 1.2 4.2E-05 35.7 10.1 82 42-126 20-110 (274)
408 4a0s_A Octenoyl-COA reductase/ 92.0 1.1 3.6E-05 39.4 10.2 95 41-173 219-336 (447)
409 4fgs_A Probable dehydrogenase 92.0 1.3 4.4E-05 36.3 10.0 123 42-173 28-159 (273)
410 3gaz_A Alcohol dehydrogenase s 91.9 0.26 9.1E-06 41.6 6.0 93 41-173 149-246 (343)
411 3r3s_A Oxidoreductase; structu 91.9 1.2 4E-05 36.7 9.9 127 42-174 48-186 (294)
412 3ijr_A Oxidoreductase, short c 91.8 1.6 5.4E-05 35.8 10.6 126 42-173 46-182 (291)
413 3is3_A 17BETA-hydroxysteroid d 91.7 1.8 6.2E-05 34.9 10.7 127 42-174 17-153 (270)
414 3k31_A Enoyl-(acyl-carrier-pro 91.7 1.5 5.2E-05 36.0 10.3 127 42-174 29-169 (296)
415 3l9w_A Glutathione-regulated p 91.5 2 6.9E-05 37.4 11.3 96 44-173 5-102 (413)
416 2eez_A Alanine dehydrogenase; 91.4 0.9 3.1E-05 38.9 8.9 103 41-173 164-266 (369)
417 3pi7_A NADH oxidoreductase; gr 91.4 0.29 1E-05 41.4 5.7 94 44-173 166-263 (349)
418 3edm_A Short chain dehydrogena 91.3 1.6 5.4E-05 35.1 9.9 126 42-173 7-143 (259)
419 3l4b_C TRKA K+ channel protien 91.0 2.2 7.6E-05 33.2 10.2 66 51-123 6-73 (218)
420 4g81_D Putative hexonate dehyd 90.9 2.5 8.4E-05 34.2 10.6 83 41-126 7-97 (255)
421 3v8b_A Putative dehydrogenase, 90.8 1.9 6.4E-05 35.2 10.0 81 42-125 27-115 (283)
422 4a27_A Synaptic vesicle membra 90.6 0.3 1E-05 41.4 5.0 94 41-173 141-238 (349)
423 1gu7_A Enoyl-[acyl-carrier-pro 90.3 0.71 2.4E-05 39.2 7.2 99 41-173 165-275 (364)
424 3f1l_A Uncharacterized oxidore 90.1 3.1 0.00011 33.1 10.5 81 42-125 11-102 (252)
425 3v2g_A 3-oxoacyl-[acyl-carrier 90.0 3.7 0.00013 33.2 11.1 127 41-173 29-165 (271)
426 3lyl_A 3-oxoacyl-(acyl-carrier 90.0 2.5 8.6E-05 33.4 9.9 82 42-126 4-93 (247)
427 3trk_A Nonstructural polyprote 90.0 0.89 3.1E-05 37.0 6.8 70 114-196 210-283 (324)
428 3uve_A Carveol dehydrogenase ( 89.7 2.6 8.8E-05 34.3 10.0 82 42-126 10-115 (286)
429 1yqd_A Sinapyl alcohol dehydro 89.7 0.34 1.2E-05 41.4 4.6 96 42-173 187-282 (366)
430 3ksu_A 3-oxoacyl-acyl carrier 89.5 3 0.0001 33.5 10.0 127 41-173 9-147 (262)
431 2cf5_A Atccad5, CAD, cinnamyl 89.4 0.42 1.4E-05 40.6 5.0 96 42-173 180-275 (357)
432 3rku_A Oxidoreductase YMR226C; 89.1 2.8 9.5E-05 34.3 9.7 83 42-125 32-125 (287)
433 1ae1_A Tropinone reductase-I; 89.1 2.4 8.1E-05 34.3 9.2 82 42-126 20-110 (273)
434 2ae2_A Protein (tropinone redu 89.1 2.3 7.9E-05 34.0 9.1 82 42-126 8-98 (260)
435 3tsc_A Putative oxidoreductase 89.0 3.3 0.00011 33.4 10.1 83 42-127 10-113 (277)
436 3t7c_A Carveol dehydrogenase; 89.0 5.8 0.0002 32.4 11.7 82 42-126 27-128 (299)
437 3u5t_A 3-oxoacyl-[acyl-carrier 88.9 3.7 0.00013 33.1 10.2 126 42-173 26-161 (267)
438 2qq5_A DHRS1, dehydrogenase/re 88.5 2.9 9.9E-05 33.4 9.3 79 42-123 4-91 (260)
439 3nyw_A Putative oxidoreductase 88.4 6.4 0.00022 31.2 11.3 82 42-126 6-98 (250)
440 3ce6_A Adenosylhomocysteinase; 88.4 0.62 2.1E-05 41.6 5.5 90 41-174 272-362 (494)
441 3i1j_A Oxidoreductase, short c 88.3 7.8 0.00027 30.4 11.7 82 42-126 13-105 (247)
442 4fn4_A Short chain dehydrogena 88.2 2.6 8.7E-05 34.1 8.7 81 41-124 5-93 (254)
443 2h7i_A Enoyl-[acyl-carrier-pro 88.2 1.3 4.4E-05 35.8 7.0 79 42-125 6-97 (269)
444 1h2b_A Alcohol dehydrogenase; 88.2 1.1 3.6E-05 38.1 6.7 74 41-122 185-261 (359)
445 2vhw_A Alanine dehydrogenase; 88.1 2.2 7.6E-05 36.6 8.7 44 41-88 166-209 (377)
446 3tqh_A Quinone oxidoreductase; 88.1 10 0.00034 31.3 13.6 92 41-172 151-244 (321)
447 1g0o_A Trihydroxynaphthalene r 88.1 5.1 0.00017 32.4 10.6 126 42-173 28-163 (283)
448 2pd4_A Enoyl-[acyl-carrier-pro 88.0 4 0.00014 32.9 9.9 82 42-126 5-95 (275)
449 3ic5_A Putative saccharopine d 88.0 4 0.00014 27.7 8.7 74 42-125 4-79 (118)
450 3pgx_A Carveol dehydrogenase; 87.9 4.5 0.00016 32.7 10.2 82 42-126 14-116 (280)
451 4g65_A TRK system potassium up 87.9 1.4 4.7E-05 39.0 7.5 69 44-121 4-74 (461)
452 4e3z_A Putative oxidoreductase 87.7 4.9 0.00017 32.3 10.3 82 42-126 25-115 (272)
453 2vn8_A Reticulon-4-interacting 87.6 1.3 4.6E-05 37.7 7.0 94 41-173 182-280 (375)
454 2dpo_A L-gulonate 3-dehydrogen 87.6 6.4 0.00022 32.9 11.0 99 44-173 7-123 (319)
455 2o3j_A UDP-glucose 6-dehydroge 87.6 6.5 0.00022 34.8 11.6 131 44-190 10-154 (481)
456 1id1_A Putative potassium chan 87.4 5.3 0.00018 29.0 9.5 73 44-123 4-79 (153)
457 2wyu_A Enoyl-[acyl carrier pro 87.3 3.5 0.00012 32.9 9.1 82 42-126 7-97 (261)
458 3oec_A Carveol dehydrogenase ( 87.1 8.1 0.00028 31.9 11.4 82 42-126 45-146 (317)
459 3l77_A Short-chain alcohol deh 87.0 5.9 0.0002 30.9 10.1 81 43-126 2-91 (235)
460 3gvc_A Oxidoreductase, probabl 86.9 6.6 0.00022 31.8 10.6 79 42-126 28-114 (277)
461 4e6p_A Probable sorbitol dehyd 86.9 7.5 0.00026 30.9 10.9 79 42-126 7-93 (259)
462 2q3e_A UDP-glucose 6-dehydroge 86.9 5.8 0.0002 35.0 10.9 130 44-190 6-149 (467)
463 3tox_A Short chain dehydrogena 86.9 2.2 7.5E-05 34.8 7.7 82 42-126 7-96 (280)
464 4e12_A Diketoreductase; oxidor 86.9 6.5 0.00022 31.9 10.6 111 44-186 5-133 (283)
465 3ggo_A Prephenate dehydrogenas 86.8 4.6 0.00016 33.6 9.7 93 43-171 33-126 (314)
466 2x9g_A PTR1, pteridine reducta 86.7 6.1 0.00021 32.0 10.3 81 42-125 22-116 (288)
467 1geg_A Acetoin reductase; SDR 86.7 4.1 0.00014 32.4 9.1 79 44-125 3-89 (256)
468 3o26_A Salutaridine reductase; 86.6 3.3 0.00011 33.7 8.7 82 42-126 11-102 (311)
469 1yxm_A Pecra, peroxisomal tran 86.1 3.4 0.00012 33.8 8.5 81 42-125 17-110 (303)
470 2bgk_A Rhizome secoisolaricire 86.1 4.7 0.00016 32.3 9.3 80 42-125 15-102 (278)
471 2dpm_A M.dpnii 1, protein (ade 86.1 5.4 0.00019 32.7 9.6 97 80-194 156-256 (284)
472 3dmg_A Probable ribosomal RNA 86.1 4 0.00014 35.0 9.2 110 42-188 45-154 (381)
473 1xq1_A Putative tropinone redu 86.0 3.6 0.00012 32.8 8.4 81 42-125 13-102 (266)
474 1pjc_A Protein (L-alanine dehy 85.9 4.3 0.00015 34.5 9.2 74 42-124 166-239 (361)
475 3lf2_A Short chain oxidoreduct 85.9 12 0.0004 29.9 12.1 82 42-126 7-98 (265)
476 3qiv_A Short-chain dehydrogena 85.8 3.7 0.00013 32.5 8.4 81 42-125 8-96 (253)
477 2p91_A Enoyl-[acyl-carrier-pro 85.7 6.8 0.00023 31.7 10.1 82 42-126 20-110 (285)
478 1qsg_A Enoyl-[acyl-carrier-pro 85.6 4.9 0.00017 32.1 9.1 82 42-126 8-98 (265)
479 1e7w_A Pteridine reductase; di 85.5 5.4 0.00019 32.5 9.5 63 42-107 8-72 (291)
480 3iup_A Putative NADPH:quinone 85.5 0.47 1.6E-05 40.8 3.0 75 41-122 169-247 (379)
481 3rkr_A Short chain oxidoreduct 85.2 3.6 0.00012 32.9 8.1 81 42-125 28-116 (262)
482 1w6u_A 2,4-dienoyl-COA reducta 85.0 6.6 0.00023 31.9 9.8 81 42-125 25-114 (302)
483 1yb1_A 17-beta-hydroxysteroid 84.8 4.5 0.00015 32.5 8.6 82 42-126 30-119 (272)
484 2g5c_A Prephenate dehydrogenas 84.5 11 0.00036 30.4 10.8 91 45-171 3-94 (281)
485 2aef_A Calcium-gated potassium 84.5 8.1 0.00028 30.2 9.8 70 42-123 8-79 (234)
486 1zsy_A Mitochondrial 2-enoyl t 84.4 6.1 0.00021 33.3 9.5 94 41-172 166-269 (357)
487 3icc_A Putative 3-oxoacyl-(acy 84.4 6.6 0.00022 31.0 9.3 127 42-174 6-148 (255)
488 2c07_A 3-oxoacyl-(acyl-carrier 84.3 6.3 0.00022 31.9 9.3 82 42-126 43-132 (285)
489 3awd_A GOX2181, putative polyo 84.2 5.1 0.00017 31.7 8.6 81 42-125 12-100 (260)
490 3tzq_B Short-chain type dehydr 84.1 7.5 0.00026 31.2 9.6 79 42-126 10-96 (271)
491 3o38_A Short chain dehydrogena 84.0 14 0.00047 29.3 11.1 83 42-127 21-113 (266)
492 3b1f_A Putative prephenate deh 83.9 8.9 0.0003 31.1 10.0 91 44-170 7-98 (290)
493 2z1n_A Dehydrogenase; reductas 83.7 6.6 0.00022 31.2 9.0 81 42-126 6-96 (260)
494 3sju_A Keto reductase; short-c 83.4 4.5 0.00015 32.7 8.0 82 42-126 23-112 (279)
495 3ius_A Uncharacterized conserv 83.0 16 0.00055 29.1 11.9 67 44-124 6-72 (286)
496 2g1u_A Hypothetical protein TM 83.0 5.3 0.00018 29.1 7.6 75 41-124 17-93 (155)
497 3ftp_A 3-oxoacyl-[acyl-carrier 83.0 5 0.00017 32.4 8.1 82 42-126 27-116 (270)
498 4egf_A L-xylulose reductase; s 83.0 16 0.00055 29.1 11.8 82 42-126 19-109 (266)
499 4f6c_A AUSA reductase domain p 82.9 11 0.00038 32.3 10.8 81 42-126 68-161 (427)
500 2vz8_A Fatty acid synthase; tr 82.9 2.6 9E-05 45.2 7.7 98 41-172 1666-1769(2512)
No 1
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.93 E-value=8.5e-26 Score=182.24 Aligned_cols=191 Identities=22% Similarity=0.249 Sum_probs=125.9
Q ss_pred eccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH
Q 025211 12 SSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE 91 (256)
Q Consensus 12 ~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~ 91 (256)
.+.+++|+|+++++.+++++++.+.. ..++.+|||+|||+|.+++.+++. .++++++|+|+++.+++.|++++.
T Consensus 2 ~~~~~~~~p~~~~~~~~~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 2 EVGPDCLIPRPDTEVLVEEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALA----CPGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp BCSGGGGSCCHHHHHHHHHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHH----CTTEEEEEEECC------------
T ss_pred cCCCCccCCCccHHHHHHHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHHHH
Confidence 46789999999999999999988753 147899999999999999888887 677899999999999999999998
Q ss_pred HcCCcceEEEcchhhchhh--hcCCCccEEEECCCCCCCCCc-----ccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211 92 AHNVHADLINTDIASGLEK--RLAGLVDVMVVNPPYVPTPED-----EVGREGIASAWAGGENGRAVIDKILPSADKLLS 164 (256)
Q Consensus 92 ~~~~~~~~~~~d~~~~~~~--~~~~~fD~Ii~npP~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 164 (256)
.++...+++++|+.+.... ...++||+|++||||+..... .....++..++.++..+...+..+++.+.++||
T Consensus 76 ~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 155 (215)
T 4dzr_A 76 RFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA 155 (215)
T ss_dssp -------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBC
T ss_pred HhCCceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc
Confidence 8877558889998874432 123789999999999876543 223345556666777777788999999999999
Q ss_pred cCeEEEEEEeCCCCHHHHHHHHH--HcCCcEEEEEecCCCCccEEE
Q 025211 165 KRGWLYLVTLTANDPSQICLQMM--EKGYAARIVVQRSTEEENLHI 208 (256)
Q Consensus 165 pgG~l~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~l 208 (256)
|||+++++.........+.+.+. +.||....+........++.+
T Consensus 156 pgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~ 201 (215)
T 4dzr_A 156 RGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIA 201 (215)
T ss_dssp SSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEE
T ss_pred CCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEE
Confidence 99995555666777888999998 889987777776666655443
No 2
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.93 E-value=2.8e-24 Score=180.92 Aligned_cols=187 Identities=22% Similarity=0.322 Sum_probs=155.4
Q ss_pred eeeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211 10 LVSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT 89 (256)
Q Consensus 10 ~~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~ 89 (256)
.+.+.++++.|+++++.+++.+++.+. .++.+|||+|||+|.+++.++.. .++++|+|+|+|+.+++.|++|
T Consensus 81 ~~~~~~~~~ipr~~te~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~----~~~~~v~~vD~s~~~l~~a~~n 152 (276)
T 2b3t_A 81 PLFVSPATLIPRPDTECLVEQALARLP----EQPCRILDLGTGTGAIALALASE----RPDCEIIAVDRMPDAVSLAQRN 152 (276)
T ss_dssp EEECCTTSCCCCTTHHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHH----CTTSEEEEECSSHHHHHHHHHH
T ss_pred eEEeCCCCcccCchHHHHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHH
Confidence 355789999999999999999998864 36789999999999999988876 5778999999999999999999
Q ss_pred HHHcCCc-ceEEEcchhhchhhhcCCCccEEEECCCCCCCCC----cccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211 90 LEAHNVH-ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPE----DEVGREGIASAWAGGENGRAVIDKILPSADKLLS 164 (256)
Q Consensus 90 ~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 164 (256)
+..+++. .+++++|+.+... .++||+|++||||+.... .++...++..++.++..+...+..++..+.++|+
T Consensus 153 ~~~~~~~~v~~~~~d~~~~~~---~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk 229 (276)
T 2b3t_A 153 AQHLAIKNIHILQSDWFSALA---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV 229 (276)
T ss_dssp HHHHTCCSEEEECCSTTGGGT---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE
T ss_pred HHHcCCCceEEEEcchhhhcc---cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC
Confidence 9998876 4899999887532 468999999999987654 1344566777777777777888999999999999
Q ss_pred cCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecCCCCccEEE
Q 025211 165 KRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRSTEEENLHI 208 (256)
Q Consensus 165 pgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 208 (256)
|||++++.. +.....++.+.+.+.||....+.....+.+++++
T Consensus 230 pgG~l~~~~-~~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~ 272 (276)
T 2b3t_A 230 SGGFLLLEH-GWQQGEAVRQAFILAGYHDVETCRDYGDNERVTL 272 (276)
T ss_dssp EEEEEEEEC-CSSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEE
T ss_pred CCCEEEEEE-CchHHHHHHHHHHHCCCcEEEEEecCCCCCcEEE
Confidence 999999954 4566788999999999987777777777666554
No 3
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.90 E-value=1.5e-22 Score=165.48 Aligned_cols=189 Identities=20% Similarity=0.242 Sum_probs=134.9
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT 89 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~ 89 (256)
+...+.+|.|+++++.+. +... ..++.+|||+||| +|.+++.+++.. +.+|+|+|+++.+++.|++|
T Consensus 31 ~~~~~~~~~p~~~~~~l~---~~~~----~~~~~~vLDlG~G~~G~~~~~la~~~-----~~~v~~vD~s~~~~~~a~~~ 98 (230)
T 3evz_A 31 IEYHPKGLVTTPISRYIF---LKTF----LRGGEVALEIGTGHTAMMALMAEKFF-----NCKVTATEVDEEFFEYARRN 98 (230)
T ss_dssp CCCCTTSCCCCHHHHHHH---HHTT----CCSSCEEEEECCTTTCHHHHHHHHHH-----CCEEEEEECCHHHHHHHHHH
T ss_pred eecCCCeEeCCCchhhhH---hHhh----cCCCCEEEEcCCCHHHHHHHHHHHhc-----CCEEEEEECCHHHHHHHHHH
Confidence 557788999988776552 2222 1478999999999 999999888863 46899999999999999999
Q ss_pred HHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEE
Q 025211 90 LEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWL 169 (256)
Q Consensus 90 ~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 169 (256)
+..+++..+++++|+.... +..+++||+|++||||+....... .++..++.++..+...+..+++.+.++|||||++
T Consensus 99 ~~~~~~~v~~~~~d~~~~~-~~~~~~fD~I~~npp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 175 (230)
T 3evz_A 99 IERNNSNVRLVKSNGGIIK-GVVEGTFDVIFSAPPYYDKPLGRV--LTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKV 175 (230)
T ss_dssp HHHTTCCCEEEECSSCSST-TTCCSCEEEEEECCCCC-----------------CCSSSCHHHHHHHHHHGGGEEEEEEE
T ss_pred HHHhCCCcEEEeCCchhhh-hcccCceeEEEECCCCcCCccccc--cChhhhhccCccchHHHHHHHHHHHHHhCCCeEE
Confidence 9999886699999964332 223478999999999998776443 3344556666667777899999999999999999
Q ss_pred EEEEeCC-CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEecC
Q 025211 170 YLVTLTA-NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWRDF 215 (256)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (256)
+++.+.. ....++.+.+.+.||....+..... .....++.+.|..
T Consensus 176 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g-~~~~~~l~f~~~~ 221 (230)
T 3evz_A 176 ALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVG-TRWRHSLIFFKGI 221 (230)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEEEECCC-C-CEEEEEEECCC
T ss_pred EEEecccHhHHHHHHHHHHHcCCceEEEEecCC-CeEEEEEEEeccc
Confidence 9977644 3456788899999997766655433 4444556665543
No 4
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.90 E-value=2.3e-22 Score=169.93 Aligned_cols=175 Identities=19% Similarity=0.254 Sum_probs=139.1
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+.+.+++|.||++++.+++++++.+.. .++.+|||+|||+|.+++.++.. ++++|+|+|+|+.+++.|++|+
T Consensus 95 ~~v~~~~lipr~~te~lv~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~-----~~~~v~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 95 FLVEEGVFVPRPETEELVELALELIRK---YGIKTVADIGTGSGAIGVSVAKF-----SDAIVFATDVSSKAVEIARKNA 166 (284)
T ss_dssp EECCTTSCCCCTTHHHHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHH-----SSCEEEEEESCHHHHHHHHHHH
T ss_pred EEeCCCceecChhHHHHHHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHC-----CCCEEEEEECCHHHHHHHHHHH
Confidence 667899999999999999999887642 35689999999999998888775 4679999999999999999999
Q ss_pred HHcCCc--ceEEEcchhhchhhhcCCCc---cEEEECCCCCCCCC---cccccccchhhhcCCCCcHHHHHHHHHHHh-h
Q 025211 91 EAHNVH--ADLINTDIASGLEKRLAGLV---DVMVVNPPYVPTPE---DEVGREGIASAWAGGENGRAVIDKILPSAD-K 161 (256)
Q Consensus 91 ~~~~~~--~~~~~~d~~~~~~~~~~~~f---D~Ii~npP~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 161 (256)
..+++. .+++++|+.+... ++| |+|++||||..... .++. .++..++.++.++. .+++.+. +
T Consensus 167 ~~~~l~~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl----~~~~~i~~~ 237 (284)
T 1nv8_A 167 ERHGVSDRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGL----DFYREFFGR 237 (284)
T ss_dssp HHTTCTTSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSC----HHHHHHHHH
T ss_pred HHcCCCCceEEEECcchhhcc----cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHH----HHHHHHHHh
Confidence 999886 4899999987543 478 99999999987554 2334 67788888877764 5677777 8
Q ss_pred ccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecCCCCccEEE
Q 025211 162 LLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRSTEEENLHI 208 (256)
Q Consensus 162 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 208 (256)
.|+|||++++. .+..+.+.+.+.+.+. .+.....+.+++.+
T Consensus 238 ~l~pgG~l~~e-~~~~q~~~v~~~~~~~-----~~~~D~~g~~R~~~ 278 (284)
T 1nv8_A 238 YDTSGKIVLME-IGEDQVEELKKIVSDT-----VFLKDSAGKYRFLL 278 (284)
T ss_dssp CCCTTCEEEEE-CCTTCHHHHTTTSTTC-----EEEECTTSSEEEEE
T ss_pred cCCCCCEEEEE-ECchHHHHHHHHHHhC-----CeecccCCCceEEE
Confidence 99999999984 5566666777766554 45566666666544
No 5
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.89 E-value=7.5e-22 Score=164.55 Aligned_cols=192 Identities=16% Similarity=0.196 Sum_probs=134.7
Q ss_pred ccCCccccCCchHHHHHHHHHhhcccccC-CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH
Q 025211 13 SHPEVYEPCDDSFALVDALLADRINLVEH-HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE 91 (256)
Q Consensus 13 ~~~~~~~p~~~~~~l~~~l~~~~~~~~~~-~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~ 91 (256)
-.++.|.+..|+.++..++ . .. ++.+|||+|||+|.+++.+++. .+. +|+|+|+++.+++.|++|+.
T Consensus 26 q~~~~~~~~~d~~ll~~~~-----~--~~~~~~~vLDlG~G~G~~~~~la~~----~~~-~v~gvDi~~~~~~~a~~n~~ 93 (259)
T 3lpm_A 26 QSPSVFSFSIDAVLLAKFS-----Y--LPIRKGKIIDLCSGNGIIPLLLSTR----TKA-KIVGVEIQERLADMAKRSVA 93 (259)
T ss_dssp EBTTTBCCCHHHHHHHHHC-----C--CCSSCCEEEETTCTTTHHHHHHHTT----CCC-EEEEECCSHHHHHHHHHHHH
T ss_pred eCCCCccCcHHHHHHHHHh-----c--CCCCCCEEEEcCCchhHHHHHHHHh----cCC-cEEEEECCHHHHHHHHHHHH
Confidence 3466788877766655543 1 24 6789999999999998877765 443 99999999999999999999
Q ss_pred HcCCc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEE
Q 025211 92 AHNVH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWL 169 (256)
Q Consensus 92 ~~~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 169 (256)
.+++. .+++++|+.+....+..++||+|++||||+................... .....+..+++.+.++|+|||++
T Consensus 94 ~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~l~~~~~~LkpgG~l 172 (259)
T 3lpm_A 94 YNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARH-EVMCTLEDTIRVAASLLKQGGKA 172 (259)
T ss_dssp HTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred HCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhc-cccCCHHHHHHHHHHHccCCcEE
Confidence 99986 3899999988765444689999999999987633221111111111111 11234678999999999999999
Q ss_pred EEEEeCCCCHHHHHHHHHHcCCcEEE---EEecCCCCccEEEEEEEecCccc
Q 025211 170 YLVTLTANDPSQICLQMMEKGYAARI---VVQRSTEEENLHIIKFWRDFDIQ 218 (256)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~l~~~~~~~~~~ 218 (256)
+++.+ .....++...+.+.+|.... +++.......++++++.|.....
T Consensus 173 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~~~~~ 223 (259)
T 3lpm_A 173 NFVHR-PERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPG 223 (259)
T ss_dssp EEEEC-TTTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEETCCSC
T ss_pred EEEEc-HHHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeCCCCC
Confidence 99765 44577888889999987654 44556677788999999876544
No 6
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.88 E-value=1.7e-21 Score=152.32 Aligned_cols=164 Identities=30% Similarity=0.538 Sum_probs=128.5
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
.+|+|+++++.+++.+... ..++.+|||+|||+|.+++.+++. + +|+|+|+++.+++. ..
T Consensus 2 ~v~~P~~~~~~l~~~l~~~-----~~~~~~vLD~GcG~G~~~~~l~~~----~---~v~gvD~s~~~~~~--------~~ 61 (170)
T 3q87_B 2 DWYEPGEDTYTLMDALERE-----GLEMKIVLDLGTSTGVITEQLRKR----N---TVVSTDLNIRALES--------HR 61 (170)
T ss_dssp CSCCCCHHHHHHHHHHHHH-----TCCSCEEEEETCTTCHHHHHHTTT----S---EEEEEESCHHHHHT--------CS
T ss_pred cccCcCccHHHHHHHHHhh-----cCCCCeEEEeccCccHHHHHHHhc----C---cEEEEECCHHHHhc--------cc
Confidence 5899999999999985432 136789999999999988776654 3 89999999999987 12
Q ss_pred cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 96 HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 96 ~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
..+++++|+.+... +++||+|++||||+..++... +.++..+. .++..+.+.| |||+++++...
T Consensus 62 ~~~~~~~d~~~~~~---~~~fD~i~~n~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 62 GGNLVRADLLCSIN---QESVDVVVFNPPYVPDTDDPI--------IGGGYLGR----EVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp SSCEEECSTTTTBC---GGGCSEEEECCCCBTTCCCTT--------TBCCGGGC----HHHHHHHHHC-CSSEEEEEEEG
T ss_pred CCeEEECChhhhcc---cCCCCEEEECCCCccCCcccc--------ccCCcchH----HHHHHHHhhC-CCCEEEEEEec
Confidence 34899999987433 378999999999987666432 33444433 4455555566 99999998888
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEecC
Q 025211 176 ANDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWRDF 215 (256)
Q Consensus 176 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (256)
.....++.+.+++.||....+.......++++.+...++.
T Consensus 126 ~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~~~~~ 165 (170)
T 3q87_B 126 ANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKSH 165 (170)
T ss_dssp GGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEEECC-
T ss_pred CCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEEeccc
Confidence 8888999999999999999998888888999888877654
No 7
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=5e-21 Score=159.73 Aligned_cols=169 Identities=14% Similarity=0.201 Sum_probs=118.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH---cCCc--ceEEEcchhhchh-----h
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA---HNVH--ADLINTDIASGLE-----K 110 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~---~~~~--~~~~~~d~~~~~~-----~ 110 (256)
.++.+|||+|||+|.+++.++.. .++..|+|+|+++.+++.|++|+.. +++. .+++++|+.+... .
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~----~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~ 110 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAAR----LEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAG 110 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHH----CTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhc
Confidence 46789999999999999888887 6678999999999999999999988 8876 3899999988743 1
Q ss_pred hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcC
Q 025211 111 RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKG 190 (256)
Q Consensus 111 ~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 190 (256)
+.+++||+|++||||+..............++..... .+..+++.+.++|||||+++++.+.. ...++...+.+.
T Consensus 111 ~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~l~~~- 185 (260)
T 2ozv_A 111 LPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEG---LFEDWIRTASAIMVSGGQLSLISRPQ-SVAEIIAACGSR- 185 (260)
T ss_dssp CCTTCEEEEEECCCC---------------------C---CHHHHHHHHHHHEEEEEEEEEEECGG-GHHHHHHHHTTT-
T ss_pred cCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcC---CHHHHHHHHHHHcCCCCEEEEEEcHH-HHHHHHHHHHhc-
Confidence 2357899999999998764211111111112211111 26788999999999999999977654 456677777664
Q ss_pred CcEEE---EEecCCCCccEEEEEEEecCccc
Q 025211 191 YAARI---VVQRSTEEENLHIIKFWRDFDIQ 218 (256)
Q Consensus 191 ~~~~~---~~~~~~~~~~~~l~~~~~~~~~~ 218 (256)
|.... ++........++++++.|.....
T Consensus 186 ~~~~~i~~v~~~~~~~~~~~lv~~~k~~~~~ 216 (260)
T 2ozv_A 186 FGGLEITLIHPRPGEDAVRMLVTAIKGSRAR 216 (260)
T ss_dssp EEEEEEEEEESSTTSCCCEEEEEEEETCCCC
T ss_pred CCceEEEEEcCCCCCCceEEEEEEEeCCCCC
Confidence 65433 44556677788999999976544
No 8
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.84 E-value=1.5e-19 Score=150.05 Aligned_cols=184 Identities=14% Similarity=0.215 Sum_probs=123.4
Q ss_pred eeccCCccccC----CchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH
Q 025211 11 VSSHPEVYEPC----DDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT 86 (256)
Q Consensus 11 ~~~~~~~~~p~----~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a 86 (256)
+.+.++++.|+ +++..+++.++..+... ..++.+|||+|||+|.+++.++.. .++++|+|+|+++.+++.|
T Consensus 31 ~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~la~~----~~~~~v~gvD~s~~~~~~a 105 (254)
T 2h00_A 31 IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSD-KSTLRRGIDIGTGASCIYPLLGAT----LNGWYFLATEVDDMCFNYA 105 (254)
T ss_dssp CCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGG-GCCCCEEEEESCTTTTHHHHHHHH----HHCCEEEEEESCHHHHHHH
T ss_pred eecCccccCCCccchHHHHHHHHHHHhhcccc-CCCCCEEEEeCCChhHHHHHHHHh----CCCCeEEEEECCHHHHHHH
Confidence 55778899998 45666666665543210 125789999999999998888876 3467999999999999999
Q ss_pred HHHHHHcCCc--ceEEEcchhhc-hhhhc---CCCccEEEECCCCCCCCCc-------ccccccchhhhcCCC-------
Q 025211 87 RKTLEAHNVH--ADLINTDIASG-LEKRL---AGLVDVMVVNPPYVPTPED-------EVGREGIASAWAGGE------- 146 (256)
Q Consensus 87 ~~~~~~~~~~--~~~~~~d~~~~-~~~~~---~~~fD~Ii~npP~~~~~~~-------~~~~~~~~~~~~~~~------- 146 (256)
++|+..+++. .+++++|+.+. ...+. +++||+|++||||+..... .....++...+.+..
T Consensus 106 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkpg 185 (254)
T 2h00_A 106 KKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEG 185 (254)
T ss_dssp HHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHH
T ss_pred HHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecC
Confidence 9999998876 48999997652 22222 2589999999999875511 111112222333222
Q ss_pred CcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEec
Q 025211 147 NGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQR 199 (256)
Q Consensus 147 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 199 (256)
....+...++....+.|+++|.++..........++.+.+++.||....+...
T Consensus 186 G~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 186 GELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp THHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 33456667777778889999988875444444478889999999987655443
No 9
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.83 E-value=1.3e-19 Score=143.81 Aligned_cols=134 Identities=14% Similarity=0.144 Sum_probs=103.6
Q ss_pred cccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc
Q 025211 18 YEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA 97 (256)
Q Consensus 18 ~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~ 97 (256)
..+|+.+..+.+.+.+.+......++.+|||+|||+|.+++.++.. +..+|+|+|+++.+++.|++|+..++++.
T Consensus 20 ~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~ 94 (189)
T 3p9n_A 20 RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-----GAASVLFVESDQRSAAVIARNIEALGLSG 94 (189)
T ss_dssp CCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-----TCSEEEEEECCHHHHHHHHHHHHHHTCSC
T ss_pred CCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-----CCCeEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 4555566777777776664332347899999999999998876653 34589999999999999999999998744
Q ss_pred -eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhh--ccccCeEEEEEEe
Q 025211 98 -DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADK--LLSKRGWLYLVTL 174 (256)
Q Consensus 98 -~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~ 174 (256)
+++++|+.+......+++||+|++||||.... .....++..+.+ +|+|||++++...
T Consensus 95 v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~--------------------~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 95 ATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDS--------------------ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEEEESCHHHHHHHCCSSCCSEEEECCCTTSCH--------------------HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred eEEEEccHHHHHhhccCCCccEEEECCCCCcch--------------------hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 99999998876544468899999999986421 236788888888 9999999999765
Q ss_pred CC
Q 025211 175 TA 176 (256)
Q Consensus 175 ~~ 176 (256)
..
T Consensus 155 ~~ 156 (189)
T 3p9n_A 155 TT 156 (189)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 10
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.80 E-value=1.4e-18 Score=140.50 Aligned_cols=163 Identities=16% Similarity=0.104 Sum_probs=117.7
Q ss_pred ccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH
Q 025211 13 SHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA 92 (256)
Q Consensus 13 ~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~ 92 (256)
..+.++.|++++ ...++. +.+ ..++.+|||+|||+|.+++.++.. .|++.++|+|+++.+++.|++++..
T Consensus 18 ~~~~~~~~~p~~-~~~~~~-~~f----~~~~~~vLDiGcG~G~~~~~la~~----~p~~~v~gvD~s~~~l~~a~~~~~~ 87 (214)
T 1yzh_A 18 ANPQYVVLNPLE-AKAKWR-DLF----GNDNPIHVEVGSGKGAFVSGMAKQ----NPDINYIGIDIQKSVLSYALDKVLE 87 (214)
T ss_dssp TCTTTEECCGGG-TTTTHH-HHH----TSCCCEEEEESCTTSHHHHHHHHH----CTTSEEEEEESCHHHHHHHHHHHHH
T ss_pred hCCCEEecChhh-cccCHH-HHc----CCCCCeEEEEccCcCHHHHHHHHH----CCCCCEEEEEcCHHHHHHHHHHHHH
Confidence 456677777754 222222 222 246789999999999999988887 6788999999999999999999998
Q ss_pred cCCcc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 93 HNVHA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 93 ~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
+++.. .++++|+.+....+.+++||+|++++|-.... ..++... .....++..+.++|+|||++++
T Consensus 88 ~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~----~~~~~~~---------~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 88 VGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPK----KRHEKRR---------LTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp HCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCS----GGGGGGS---------TTSHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccc----cchhhhc---------cCCHHHHHHHHHHcCCCcEEEE
Confidence 88754 89999998743223457899999997632111 0011110 0146889999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211 172 VTLTANDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
.+........+.+.+.+.||....+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 155 KTDNRGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp EESCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHCCCeeeeccc
Confidence 765444456777888888988765554
No 11
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.79 E-value=3.1e-18 Score=142.79 Aligned_cols=109 Identities=20% Similarity=0.203 Sum_probs=88.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
+++.+|||+|||+|..++.+++.+. .++++|+|+|+|+.|++.|++++...+.. .+++++|+.+.. .+.||+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~--~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~----~~~~d~ 142 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIH--HDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA----IENASM 142 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCC--SSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC----CCSEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcC--CCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc----cccccc
Confidence 5889999999999999988887654 35789999999999999999999877654 389999987752 257999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
|+++..+++.+.. ....++++++++|||||++++...
T Consensus 143 v~~~~~l~~~~~~-------------------~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 143 VVLNFTLQFLEPS-------------------ERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEEESCGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceeeeeeeecCch-------------------hHhHHHHHHHHHcCCCcEEEEEec
Confidence 9997654433221 246789999999999999998764
No 12
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.78 E-value=7.7e-18 Score=146.42 Aligned_cols=154 Identities=22% Similarity=0.180 Sum_probs=113.1
Q ss_pred CCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceE
Q 025211 21 CDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADL 99 (256)
Q Consensus 21 ~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~ 99 (256)
.+..+.++..++..... .++.+|||+|||+|.++++++.+.+ ++..++|+|+++.+++.|++|+...++. .++
T Consensus 185 a~l~~~la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~---~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~ 258 (354)
T 3tma_A 185 GSLTPVLAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLG---PTSPVYAGDLDEKRLGLAREAALASGLSWIRF 258 (354)
T ss_dssp CSCCHHHHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHC---TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEE
T ss_pred CCcCHHHHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhC---CCceEEEEECCHHHHHHHHHHHHHcCCCceEE
Confidence 33456677777665432 4678999999999999999998741 5679999999999999999999999875 499
Q ss_pred EEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH
Q 025211 100 INTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP 179 (256)
Q Consensus 100 ~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 179 (256)
.++|+.+...+ ...||+|++||||....... ......+..+++.+.++|+|||+++++++. .
T Consensus 259 ~~~D~~~~~~~--~~~~D~Ii~npPyg~r~~~~-------------~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~---~ 320 (354)
T 3tma_A 259 LRADARHLPRF--FPEVDRILANPPHGLRLGRK-------------EGLFHLYWDFLRGALALLPPGGRVALLTLR---P 320 (354)
T ss_dssp EECCGGGGGGT--CCCCSEEEECCCSCC----C-------------HHHHHHHHHHHHHHHHTSCTTCEEEEEESC---H
T ss_pred EeCChhhCccc--cCCCCEEEECCCCcCccCCc-------------ccHHHHHHHHHHHHHHhcCCCcEEEEEeCC---H
Confidence 99999887433 35689999999997533211 001234578899999999999999998752 3
Q ss_pred HHHHHHHHHcCCcEEEEEec
Q 025211 180 SQICLQMMEKGYAARIVVQR 199 (256)
Q Consensus 180 ~~~~~~~~~~g~~~~~~~~~ 199 (256)
..+...+. .||+.......
T Consensus 321 ~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 321 ALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp HHHHHHCC-TTEEEEEEEEC
T ss_pred HHHHHHhh-cCcEEEEEEEE
Confidence 33444444 77776544433
No 13
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.78 E-value=6.4e-18 Score=136.73 Aligned_cols=162 Identities=14% Similarity=0.111 Sum_probs=115.0
Q ss_pred ccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH
Q 025211 13 SHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA 92 (256)
Q Consensus 13 ~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~ 92 (256)
..+.++.+.+++ ...+|.. .+ ..++.+|||+|||+|.+++.+++. .|++.++|+|+++.+++.|++++..
T Consensus 15 ~~~~~~~~~~~~-~~~~~~~-~f----~~~~~~vLDiGcG~G~~~~~la~~----~p~~~v~giD~s~~~l~~a~~~~~~ 84 (213)
T 2fca_A 15 ENADIAISNPAD-YKGKWNT-VF----GNDNPIHIEVGTGKGQFISGMAKQ----NPDINYIGIELFKSVIVTAVQKVKD 84 (213)
T ss_dssp HTTTTBCSCGGG-GTTCHHH-HH----TSCCCEEEEECCTTSHHHHHHHHH----CTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred hCccEEecCccc-cCCCHHH-Hc----CCCCceEEEEecCCCHHHHHHHHH----CCCCCEEEEEechHHHHHHHHHHHH
Confidence 455666666543 2233322 22 246789999999999999988887 7788999999999999999999998
Q ss_pred cCCcc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 93 HNVHA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 93 ~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
+++.+ .++++|+.+....+.+++||.|+++.|-...... +. .... ....++..+.++|||||++++
T Consensus 85 ~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~----~~-~~rl--------~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 85 SEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKR----HE-KRRL--------TYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp SCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGG----GG-GGST--------TSHHHHHHHHHHHTTSCEEEE
T ss_pred cCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCcc----cc-cccc--------CcHHHHHHHHHHcCCCCEEEE
Confidence 88765 9999999874322446789999987542111000 00 0000 136889999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211 172 VTLTANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
.+........+...+.+.||......
T Consensus 152 ~td~~~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 152 KTDNRGLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp EESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHCCCcccccc
Confidence 77544445667778888888765443
No 14
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.78 E-value=1.4e-17 Score=140.16 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=102.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
+++.+|||+|||+|.+++.+++. ++. .|+|+|+++.+++.|++|+..+++.. +++++|+.+... .++||+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~----~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~---~~~fD~ 195 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVY----GKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHH----TCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHh----CCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc---cCCccE
Confidence 46899999999999999999887 333 79999999999999999999999864 799999988754 578999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC------CCCHHHHHHHHHHcCCc
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT------ANDPSQICLQMMEKGYA 192 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------~~~~~~~~~~~~~~g~~ 192 (256)
|+++||+. ...++..+.++|+|||++++.+.. ......+.+.+.+.|+.
T Consensus 196 Vi~~~p~~-------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 196 ILMGYVVR-------------------------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp EEECCCSS-------------------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCE
T ss_pred EEECCchh-------------------------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCe
Confidence 99999964 246688889999999999997765 24456788888999998
Q ss_pred EEE
Q 025211 193 ARI 195 (256)
Q Consensus 193 ~~~ 195 (256)
...
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 765
No 15
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.78 E-value=1.6e-17 Score=133.13 Aligned_cols=135 Identities=17% Similarity=0.257 Sum_probs=110.3
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d 103 (256)
..+...++..+. ..++.+|||+|||+|.+++.+++. +|..+|+|+|+++.+++.|++++..++++. +++.+|
T Consensus 26 ~~i~~~~l~~l~---~~~~~~vLDiG~G~G~~~~~la~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 26 QEVRAVTLSKLR---LQDDLVMWDIGAGSASVSIEASNL----MPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEETCTTCHHHHHHHHH----CTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred HHHHHHHHHHcC---CCCCCEEEEECCCCCHHHHHHHHH----CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 444455555543 257899999999999999888887 667899999999999999999999888754 899999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHH
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQIC 183 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 183 (256)
+.+.... ..+||+|+++.++. ....+++.+.++|+|||++++.........++.
T Consensus 99 ~~~~~~~--~~~~D~i~~~~~~~------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 152 (204)
T 3e05_A 99 APEGLDD--LPDPDRVFIGGSGG------------------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAV 152 (204)
T ss_dssp TTTTCTT--SCCCSEEEESCCTT------------------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHH
T ss_pred hhhhhhc--CCCCCEEEECCCCc------------------------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHH
Confidence 8766443 26799999987653 157889999999999999999877666677889
Q ss_pred HHHHHcCCc
Q 025211 184 LQMMEKGYA 192 (256)
Q Consensus 184 ~~~~~~g~~ 192 (256)
+.+.+.||.
T Consensus 153 ~~l~~~g~~ 161 (204)
T 3e05_A 153 EFLEDHGYM 161 (204)
T ss_dssp HHHHHTTCE
T ss_pred HHHHHCCCc
Confidence 999999984
No 16
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.78 E-value=7.7e-18 Score=147.52 Aligned_cols=143 Identities=22% Similarity=0.280 Sum_probs=113.2
Q ss_pred eeeccCCccc---cCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH
Q 025211 10 LVSSHPEVYE---PCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT 86 (256)
Q Consensus 10 ~~~~~~~~~~---p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a 86 (256)
.+...|++|. +...++.+.+.+.+.+.. ...++.+|||+|||+|.+++.+++. +++|+++|+++.+++.|
T Consensus 199 ~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~-~~~~~~~VLDlGcG~G~~~~~la~~------g~~V~gvDis~~al~~A 271 (381)
T 3dmg_A 199 TFHHLPGVFSAGKVDPASLLLLEALQERLGP-EGVRGRQVLDLGAGYGALTLPLARM------GAEVVGVEDDLASVLSL 271 (381)
T ss_dssp EEEECTTCTTTTSCCHHHHHHHHHHHHHHCT-TTTTTCEEEEETCTTSTTHHHHHHT------TCEEEEEESBHHHHHHH
T ss_pred EEEeCCCceeCCCCCHHHHHHHHHHHHhhcc-cCCCCCEEEEEeeeCCHHHHHHHHc------CCEEEEEECCHHHHHHH
Confidence 3667888887 444578888888775421 1236789999999999999888775 45999999999999999
Q ss_pred HHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC
Q 025211 87 RKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR 166 (256)
Q Consensus 87 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 166 (256)
++|+..+++..+++.+|+.+...+ .++||+|++||||+..... .......++..+.++|+||
T Consensus 272 ~~n~~~~~~~v~~~~~D~~~~~~~--~~~fD~Ii~npp~~~~~~~----------------~~~~~~~~l~~~~~~LkpG 333 (381)
T 3dmg_A 272 QKGLEANALKAQALHSDVDEALTE--EARFDIIVTNPPFHVGGAV----------------ILDVAQAFVNVAAARLRPG 333 (381)
T ss_dssp HHHHHHTTCCCEEEECSTTTTSCT--TCCEEEEEECCCCCTTCSS----------------CCHHHHHHHHHHHHHEEEE
T ss_pred HHHHHHcCCCeEEEEcchhhcccc--CCCeEEEEECCchhhcccc----------------cHHHHHHHHHHHHHhcCcC
Confidence 999999998889999999886432 4789999999999753221 1234678999999999999
Q ss_pred eEEEEEEeCCC
Q 025211 167 GWLYLVTLTAN 177 (256)
Q Consensus 167 G~l~~~~~~~~ 177 (256)
|+++++.....
T Consensus 334 G~l~iv~n~~l 344 (381)
T 3dmg_A 334 GVFFLVSNPFL 344 (381)
T ss_dssp EEEEEEECTTS
T ss_pred cEEEEEEcCCC
Confidence 99999876544
No 17
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.77 E-value=9.8e-18 Score=132.14 Aligned_cols=135 Identities=14% Similarity=0.116 Sum_probs=103.5
Q ss_pred ccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH
Q 025211 13 SHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA 92 (256)
Q Consensus 13 ~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~ 92 (256)
..++ ..+++.++.+++.+++.+... .++.+|||+|||+|.+++.++.. +..+|+|+|+++.+++.|++++..
T Consensus 18 ~~~~-~~~rp~~~~~~~~~~~~l~~~--~~~~~vLD~GcG~G~~~~~~~~~-----~~~~v~~vD~~~~~~~~a~~~~~~ 89 (187)
T 2fhp_A 18 ALDG-DNTRPTTDKVKESIFNMIGPY--FDGGMALDLYSGSGGLAIEAVSR-----GMDKSICIEKNFAALKVIKENIAI 89 (187)
T ss_dssp CCCC-CSSCCCCHHHHHHHHHHHCSC--CSSCEEEETTCTTCHHHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCC-CCcCcCHHHHHHHHHHHHHhh--cCCCCEEEeCCccCHHHHHHHHc-----CCCEEEEEECCHHHHHHHHHHHHH
Confidence 4443 367777788888888876432 36789999999999998877663 346899999999999999999999
Q ss_pred cCCc--ceEEEcchhhchhhh--cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHH--hhccccC
Q 025211 93 HNVH--ADLINTDIASGLEKR--LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSA--DKLLSKR 166 (256)
Q Consensus 93 ~~~~--~~~~~~d~~~~~~~~--~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~Lkpg 166 (256)
+++. .+++++|+.+..... ..++||+|++||||.... ...++..+ .++|+||
T Consensus 90 ~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~----------------------~~~~~~~l~~~~~L~~g 147 (187)
T 2fhp_A 90 TKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQE----------------------IVSQLEKMLERQLLTNE 147 (187)
T ss_dssp HTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCC----------------------HHHHHHHHHHTTCEEEE
T ss_pred hCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchh----------------------HHHHHHHHHHhcccCCC
Confidence 8874 489999998865422 257899999999975211 23445555 8899999
Q ss_pred eEEEEEEeCCC
Q 025211 167 GWLYLVTLTAN 177 (256)
Q Consensus 167 G~l~~~~~~~~ 177 (256)
|++++..+...
T Consensus 148 G~l~~~~~~~~ 158 (187)
T 2fhp_A 148 AVIVCETDKTV 158 (187)
T ss_dssp EEEEEEEETTC
T ss_pred CEEEEEeCCcc
Confidence 99999776554
No 18
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.77 E-value=8.6e-18 Score=134.74 Aligned_cols=130 Identities=15% Similarity=0.206 Sum_probs=92.9
Q ss_pred ccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-
Q 025211 17 VYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV- 95 (256)
Q Consensus 17 ~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~- 95 (256)
.+.|.. ..+.+.+.+.+... .++.+|||+|||+|.+++.++.. + ...|+|+|+|+.+++.|++|+..+++
T Consensus 32 ~~rp~~--~~~~~~l~~~l~~~--~~~~~vLDlGcGtG~~~~~~~~~----~-~~~v~gvD~s~~~l~~a~~~~~~~~~~ 102 (201)
T 2ift_A 32 GLRPTG--DRVKETLFNWLMPY--IHQSECLDGFAGSGSLGFEALSR----Q-AKKVTFLELDKTVANQLKKNLQTLKCS 102 (201)
T ss_dssp --------CHHHHHHHHHHHHH--HTTCEEEETTCTTCHHHHHHHHT----T-CSEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CcCcCH--HHHHHHHHHHHHHh--cCCCeEEEcCCccCHHHHHHHHc----c-CCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 344444 44445554444321 25789999999999998876654 2 24899999999999999999999987
Q ss_pred -c-ceEEEcchhhchhhhcCCC-ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHH--hhccccCeEEE
Q 025211 96 -H-ADLINTDIASGLEKRLAGL-VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSA--DKLLSKRGWLY 170 (256)
Q Consensus 96 -~-~~~~~~d~~~~~~~~~~~~-fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~ 170 (256)
+ .+++++|+.+......+++ ||+|+++|||.. . ....++..+ .++|+|||+++
T Consensus 103 ~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~-~---------------------~~~~~l~~~~~~~~LkpgG~l~ 160 (201)
T 2ift_A 103 SEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHF-N---------------------LAEQAISLLCENNWLKPNALIY 160 (201)
T ss_dssp TTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSSS-C---------------------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccceEEEECCHHHHHHhhccCCCCCEEEECCCCCC-c---------------------cHHHHHHHHHhcCccCCCcEEE
Confidence 3 4999999987654323568 999999999741 1 145667777 67899999999
Q ss_pred EEEeCCC
Q 025211 171 LVTLTAN 177 (256)
Q Consensus 171 ~~~~~~~ 177 (256)
+......
T Consensus 161 i~~~~~~ 167 (201)
T 2ift_A 161 VETEKDK 167 (201)
T ss_dssp EEEESSS
T ss_pred EEECCCC
Confidence 9776544
No 19
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.77 E-value=5.7e-18 Score=148.16 Aligned_cols=142 Identities=20% Similarity=0.262 Sum_probs=104.0
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+..+|++|.+... ......+++.+. ..++.+|||+|||+|.+++.+++. +|+.+|+|+|+++.+++.+++|+
T Consensus 195 ~~~~pg~Fs~~~~-d~~~~~ll~~l~---~~~~~~VLDlGcG~G~~s~~la~~----~p~~~V~gvD~s~~al~~Ar~n~ 266 (375)
T 4dcm_A 195 IHNHANVFSRTGL-DIGARFFMQHLP---ENLEGEIVDLGCGNGVIGLTLLDK----NPQAKVVFVDESPMAVASSRLNV 266 (375)
T ss_dssp EEECTTCTTCSSC-CHHHHHHHHTCC---CSCCSEEEEETCTTCHHHHHHHHH----CTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEeCCCcccCCcc-cHHHHHHHHhCc---ccCCCeEEEEeCcchHHHHHHHHH----CCCCEEEEEECcHHHHHHHHHHH
Confidence 5567888877332 111233344443 245689999999999999999887 77889999999999999999999
Q ss_pred HHcCCc----ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC
Q 025211 91 EAHNVH----ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR 166 (256)
Q Consensus 91 ~~~~~~----~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 166 (256)
..+++. .+++.+|+.+.. .+++||+|++||||+...... ......+++.+.++||||
T Consensus 267 ~~ngl~~~~~v~~~~~D~~~~~---~~~~fD~Ii~nppfh~~~~~~----------------~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 267 ETNMPEALDRCEFMINNALSGV---EPFRFNAVLCNPPFHQQHALT----------------DNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp HHHCGGGGGGEEEEECSTTTTC---CTTCEEEEEECCCC-----------------------CCHHHHHHHHHHHHEEEE
T ss_pred HHcCCCcCceEEEEechhhccC---CCCCeeEEEECCCcccCcccC----------------HHHHHHHHHHHHHhCCCC
Confidence 999865 367999988743 347899999999997532210 012457899999999999
Q ss_pred eEEEEEEeCCCCH
Q 025211 167 GWLYLVTLTANDP 179 (256)
Q Consensus 167 G~l~~~~~~~~~~ 179 (256)
|+++++.......
T Consensus 328 G~l~iv~n~~~~~ 340 (375)
T 4dcm_A 328 GELYIVANRHLDY 340 (375)
T ss_dssp EEEEEEEETTSCH
T ss_pred cEEEEEEECCcCH
Confidence 9999987655433
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.77 E-value=5.1e-17 Score=130.57 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=108.0
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-c-eEEEc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-A-DLINT 102 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~-~~~~~ 102 (256)
..+...++..+. ..++.+|||+|||+|.+++.+++. +++|+|+|+++.+++.|++++..+++. . +++.+
T Consensus 41 ~~~~~~~l~~l~---~~~~~~vLDlGcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 111 (204)
T 3njr_A 41 SPMRALTLAALA---PRRGELLWDIGGGSGSVSVEWCLA------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG 111 (204)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred HHHHHHHHHhcC---CCCCCEEEEecCCCCHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence 344444555543 257899999999999998888775 468999999999999999999999887 3 89999
Q ss_pred chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHH
Q 025211 103 DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQI 182 (256)
Q Consensus 103 d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 182 (256)
|+.+.... ..+||+|++++... .. +++.+.++|||||++++.........++
T Consensus 112 d~~~~~~~--~~~~D~v~~~~~~~-------------------------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 163 (204)
T 3njr_A 112 TAPAALAD--LPLPEAVFIGGGGS-------------------------QA-LYDRLWEWLAPGTRIVANAVTLESETLL 163 (204)
T ss_dssp CTTGGGTT--SCCCSEEEECSCCC-------------------------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHH
T ss_pred chhhhccc--CCCCCEEEECCccc-------------------------HH-HHHHHHHhcCCCcEEEEEecCcccHHHH
Confidence 99885443 25799999975320 35 8999999999999999988766667788
Q ss_pred HHHHHHcCCcEEEEE
Q 025211 183 CLQMMEKGYAARIVV 197 (256)
Q Consensus 183 ~~~~~~~g~~~~~~~ 197 (256)
.+.+++.|++...+.
T Consensus 164 ~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 164 TQLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHHCSEEEEEE
T ss_pred HHHHHhCCCcEEEEE
Confidence 899999998765543
No 21
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.77 E-value=4.2e-17 Score=128.60 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=84.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.+++.+++. +.+|+|+|+++.+++.|++++..++++. ++++.+..... ...+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~-~~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL------SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD-HYVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-GTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-hhccCCcCEE
Confidence 47899999999999998877764 5699999999999999999999888754 88887766542 2336789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+++++|.+....... ........+++.+.++|||||+++++...
T Consensus 94 ~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 94 IFNLGYLPSADKSVI------------TKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEC-----------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEeCCCCCCcchhcc------------cChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 999888654322110 01123567789999999999999987653
No 22
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.77 E-value=9.4e-18 Score=132.59 Aligned_cols=146 Identities=17% Similarity=0.310 Sum_probs=112.3
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+...+++|.|... ....+.+++.+. ..++.+|||+|||+|.++..++.. +.+++|+|+++.+++.+++++
T Consensus 25 ~~~~~~~~~~~~~-~~~~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~~~~~------~~~v~~~D~~~~~~~~a~~~~ 94 (194)
T 1dus_A 25 FKTDSGVFSYGKV-DKGTKILVENVV---VDKDDDILDLGCGYGVIGIALADE------VKSTTMADINRRAIKLAKENI 94 (194)
T ss_dssp EEEETTSTTTTSC-CHHHHHHHHHCC---CCTTCEEEEETCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHH
T ss_pred EEeCCCcCCcccc-chHHHHHHHHcc---cCCCCeEEEeCCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHH
Confidence 4466778888732 133344444443 247789999999999987766554 469999999999999999999
Q ss_pred HHcCCc---ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe
Q 025211 91 EAHNVH---ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG 167 (256)
Q Consensus 91 ~~~~~~---~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 167 (256)
..+++. .+++.+|+.+... +++||+|++++||+.. ......+++.+.++|+|||
T Consensus 95 ~~~~~~~~~~~~~~~d~~~~~~---~~~~D~v~~~~~~~~~--------------------~~~~~~~l~~~~~~L~~gG 151 (194)
T 1dus_A 95 KLNNLDNYDIRVVHSDLYENVK---DRKYNKIITNPPIRAG--------------------KEVLHRIIEEGKELLKDNG 151 (194)
T ss_dssp HHTTCTTSCEEEEECSTTTTCT---TSCEEEEEECCCSTTC--------------------HHHHHHHHHHHHHHEEEEE
T ss_pred HHcCCCccceEEEECchhcccc---cCCceEEEECCCcccc--------------------hhHHHHHHHHHHHHcCCCC
Confidence 988875 5889999877533 4689999999998631 2236788999999999999
Q ss_pred EEEEEEeCCCCHHHHHHHHHHc
Q 025211 168 WLYLVTLTANDPSQICLQMMEK 189 (256)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~ 189 (256)
++++..+......++.+.+.+.
T Consensus 152 ~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 152 EIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp EEEEEEESTHHHHHHHHHHHHH
T ss_pred EEEEEECCCCChHHHHHHHHHH
Confidence 9999888766566677777776
No 23
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.77 E-value=5.2e-17 Score=134.88 Aligned_cols=137 Identities=15% Similarity=0.219 Sum_probs=110.5
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
+..+.+.+...+ .++.+|||+|||+|.+++.+++. ++ +|+|+|+++.+++.+++|+..+++..++..+|
T Consensus 107 t~~~~~~l~~~~-----~~~~~VLDiGcG~G~l~~~la~~----g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d 175 (254)
T 2nxc_A 107 TRLALKALARHL-----RPGDKVLDLGTGSGVLAIAAEKL----GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGS 175 (254)
T ss_dssp HHHHHHHHHHHC-----CTTCEEEEETCTTSHHHHHHHHT----TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESC
T ss_pred HHHHHHHHHHhc-----CCCCEEEEecCCCcHHHHHHHHh----CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECC
Confidence 445555554442 46899999999999998887764 33 99999999999999999999988777888999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHH
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQIC 183 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 183 (256)
+.+..+ +++||+|++|+++ .....++..+.++|+|||+++++........++.
T Consensus 176 ~~~~~~---~~~fD~Vv~n~~~------------------------~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~ 228 (254)
T 2nxc_A 176 LEAALP---FGPFDLLVANLYA------------------------ELHAALAPRYREALVPGGRALLTGILKDRAPLVR 228 (254)
T ss_dssp HHHHGG---GCCEEEEEEECCH------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHH
T ss_pred hhhcCc---CCCCCEEEECCcH------------------------HHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHH
Confidence 877532 3689999998753 1256889999999999999999776666788899
Q ss_pred HHHHHcCCcEEEEEe
Q 025211 184 LQMMEKGYAARIVVQ 198 (256)
Q Consensus 184 ~~~~~~g~~~~~~~~ 198 (256)
+.+.+.||.......
T Consensus 229 ~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 229 EAMAGAGFRPLEEAA 243 (254)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHCCCEEEEEec
Confidence 999999998766544
No 24
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.76 E-value=8e-18 Score=131.81 Aligned_cols=133 Identities=14% Similarity=0.119 Sum_probs=95.1
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN 94 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~ 94 (256)
|....+|+.++.+.+.+.+.+... .++.+|||+|||+|.+++.++.. +...|+|+|+++.+++.|++++..++
T Consensus 6 p~~~~~rp~~~~~~~~~~~~l~~~--~~~~~vLDlGcG~G~~~~~l~~~-----~~~~v~~vD~~~~~~~~a~~~~~~~~ 78 (177)
T 2esr_A 6 LDGKITRPTSDKVRGAIFNMIGPY--FNGGRVLDLFAGSGGLAIEAVSR-----GMSAAVLVEKNRKAQAIIQDNIIMTK 78 (177)
T ss_dssp ------------CHHHHHHHHCSC--CCSCEEEEETCTTCHHHHHHHHT-----TCCEEEEECCCHHHHHHHHHHHHTTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHhh--cCCCeEEEeCCCCCHHHHHHHHc-----CCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 344456666677778877776422 46789999999999998887764 34589999999999999999999888
Q ss_pred Cc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh--hccccCeEEE
Q 025211 95 VH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD--KLLSKRGWLY 170 (256)
Q Consensus 95 ~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~ 170 (256)
+. .+++.+|+.+..+. .+++||+|+++|||.. .....++..+. ++|+|||+++
T Consensus 79 ~~~~~~~~~~d~~~~~~~-~~~~fD~i~~~~~~~~----------------------~~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 79 AENRFTLLKMEAERAIDC-LTGRFDLVFLDPPYAK----------------------ETIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp CGGGEEEECSCHHHHHHH-BCSCEEEEEECCSSHH----------------------HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCceEEEECcHHHhHHh-hcCCCCEEEECCCCCc----------------------chHHHHHHHHHhCCCcCCCcEEE
Confidence 75 38999999885433 3467999999999841 12345566665 8999999999
Q ss_pred EEEeCCC
Q 025211 171 LVTLTAN 177 (256)
Q Consensus 171 ~~~~~~~ 177 (256)
+......
T Consensus 136 ~~~~~~~ 142 (177)
T 2esr_A 136 CETDKTV 142 (177)
T ss_dssp EEEETTC
T ss_pred EEECCcc
Confidence 9776554
No 25
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.76 E-value=4.2e-17 Score=130.77 Aligned_cols=125 Identities=18% Similarity=0.295 Sum_probs=105.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.+++.+++. +..+++|+|+++.+++.|++++..++.. .+++.+|+.+.. +++||+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-----GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC----CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-----CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC----CCCceEE
Confidence 46899999999999998877653 3459999999999999999999998887 599999987642 4789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
++++++. .+..+++.+.++|+|||++++.........++...+.+.||.......
T Consensus 130 ~~~~~~~------------------------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 130 VANILAE------------------------ILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp EEESCHH------------------------HHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEE
T ss_pred EECCcHH------------------------HHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeec
Confidence 9997741 257889999999999999999776666778899999999998766544
No 26
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.76 E-value=7e-17 Score=133.69 Aligned_cols=161 Identities=12% Similarity=0.087 Sum_probs=115.8
Q ss_pred hHHHHHHHHHhhcccc---cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eE
Q 025211 24 SFALVDALLADRINLV---EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DL 99 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~---~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~ 99 (256)
.+++...++..+..+. ..++.+|||+|||+|.+++.++.. .|+++|+++|+++.+++.|++|+..+++.+ ++
T Consensus 59 ~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~ 134 (249)
T 3g89_A 59 EEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIV----RPELELVLVDATRKKVAFVERAIEVLGLKGARA 134 (249)
T ss_dssp HHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHH----CTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEE
T ss_pred HHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHHHhCCCceEE
Confidence 4555555555543322 246789999999999999998887 678899999999999999999999999864 99
Q ss_pred EEcchhhchhh-hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-
Q 025211 100 INTDIASGLEK-RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN- 177 (256)
Q Consensus 100 ~~~d~~~~~~~-~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~- 177 (256)
+++|+.+.... ...++||+|+++-.- .+..+++.+.++|||||+++++.....
T Consensus 135 ~~~d~~~~~~~~~~~~~fD~I~s~a~~-------------------------~~~~ll~~~~~~LkpgG~l~~~~g~~~~ 189 (249)
T 3g89_A 135 LWGRAEVLAREAGHREAYARAVARAVA-------------------------PLCVLSELLLPFLEVGGAAVAMKGPRVE 189 (249)
T ss_dssp EECCHHHHTTSTTTTTCEEEEEEESSC-------------------------CHHHHHHHHGGGEEEEEEEEEEECSCCH
T ss_pred EECcHHHhhcccccCCCceEEEECCcC-------------------------CHHHHHHHHHHHcCCCeEEEEEeCCCcH
Confidence 99999876432 224789999995210 157889999999999999998654322
Q ss_pred -CHHHHHHHHHHcCCcEEEEEec--CCCCccEEEEEEEe
Q 025211 178 -DPSQICLQMMEKGYAARIVVQR--STEEENLHIIKFWR 213 (256)
Q Consensus 178 -~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~ 213 (256)
...++.+.+...|+....+... ........++...+
T Consensus 190 ~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 190 EELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp HHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 1234566777889887655433 22234445555554
No 27
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.76 E-value=1.2e-17 Score=133.97 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=105.7
Q ss_pred CCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eE
Q 025211 21 CDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DL 99 (256)
Q Consensus 21 ~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~ 99 (256)
+++++.+++.+++.+......++.+|||+|||+|.+++.++.. .|+.+++|+|+++.+++.+++++..+++.. ++
T Consensus 44 ~~~~~~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~ 119 (207)
T 1jsx_A 44 RDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIV----RPEAHFTLLDSLGKRVRFLRQVQHELKLENIEP 119 (207)
T ss_dssp ----CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHH----CTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCHHHHHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHH----CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEE
Confidence 5556777777777664321124789999999999999888877 567899999999999999999999888764 89
Q ss_pred EEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH
Q 025211 100 INTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP 179 (256)
Q Consensus 100 ~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 179 (256)
+++|+.+... .++||+|+++..- ....++..+.++|+|||++++... ....
T Consensus 120 ~~~d~~~~~~---~~~~D~i~~~~~~-------------------------~~~~~l~~~~~~L~~gG~l~~~~~-~~~~ 170 (207)
T 1jsx_A 120 VQSRVEEFPS---EPPFDGVISRAFA-------------------------SLNDMVSWCHHLPGEQGRFYALKG-QMPE 170 (207)
T ss_dssp EECCTTTSCC---CSCEEEEECSCSS-------------------------SHHHHHHHHTTSEEEEEEEEEEES-SCCH
T ss_pred EecchhhCCc---cCCcCEEEEeccC-------------------------CHHHHHHHHHHhcCCCcEEEEEeC-CCch
Confidence 9999987642 3689999986310 157889999999999999999643 4456
Q ss_pred HHHHHHHHHcCCcEEE
Q 025211 180 SQICLQMMEKGYAARI 195 (256)
Q Consensus 180 ~~~~~~~~~~g~~~~~ 195 (256)
+++...+. ||....
T Consensus 171 ~~~~~~~~--g~~~~~ 184 (207)
T 1jsx_A 171 DEIALLPE--EYQVES 184 (207)
T ss_dssp HHHHTSCT--TEEEEE
T ss_pred HHHHHHhc--CCceee
Confidence 66666554 777655
No 28
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.76 E-value=9.6e-17 Score=132.02 Aligned_cols=149 Identities=10% Similarity=0.077 Sum_probs=110.2
Q ss_pred ccCCchHHHHHHHHHhhcccc---cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 19 EPCDDSFALVDALLADRINLV---EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 19 ~p~~~~~~l~~~l~~~~~~~~---~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
.++...+.+...+.+.+.... ..++.+|||+|||+|.+++.++.. .++++|+|+|+++.+++.|++++..+++
T Consensus 44 ~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 119 (240)
T 1xdz_A 44 SITEKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKIC----FPHLHVTIVDSLNKRITFLEKLSEALQL 119 (240)
T ss_dssp SCCSHHHHHHHTHHHHHGGGGTSCGGGCCEEEEECSSSCTTHHHHHHH----CTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHhHHHhcccCCCCEEEEecCCCCHHHHHHHHh----CCCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 455556666666665543221 136789999999999999888875 5678999999999999999999999887
Q ss_pred cc-eEEEcchhhchhh-hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 96 HA-DLINTDIASGLEK-RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 96 ~~-~~~~~d~~~~~~~-~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.. +++++|+.+.... ..+++||+|+++..- ....+++.+.++|+|||++++..
T Consensus 120 ~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~-------------------------~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 120 ENTTFCHDRAETFGQRKDVRESYDIVTARAVA-------------------------RLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp SSEEEEESCHHHHTTCTTTTTCEEEEEEECCS-------------------------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEEeccHHHhcccccccCCccEEEEeccC-------------------------CHHHHHHHHHHhcCCCCEEEEEe
Confidence 54 9999999775321 124789999995410 15788999999999999999864
Q ss_pred eCCCCHH---HHHHHHHHcCCcEEEEE
Q 025211 174 LTANDPS---QICLQMMEKGYAARIVV 197 (256)
Q Consensus 174 ~~~~~~~---~~~~~~~~~g~~~~~~~ 197 (256)
. ....+ ++.+.+...||......
T Consensus 175 g-~~~~~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 175 A-ASAEEELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp C-C-CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred C-CCchHHHHHHHHHHHHcCCeEeEEE
Confidence 3 22233 45667778898775543
No 29
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=7.1e-17 Score=133.66 Aligned_cols=146 Identities=16% Similarity=0.145 Sum_probs=114.0
Q ss_pred CchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceE
Q 025211 22 DDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADL 99 (256)
Q Consensus 22 ~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~ 99 (256)
+........++..+..+ .++.+|||+|||+|.++..++.. .+. +|+|+|+++.+++.+++++..+++. .++
T Consensus 28 ~~~~~~~~~~l~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~----~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 100 (257)
T 3f4k_A 28 PGSPEATRKAVSFINEL--TDDAKIADIGCGTGGQTLFLADY----VKG-QITGIDLFPDFIEIFNENAVKANCADRVKG 100 (257)
T ss_dssp SCCHHHHHHHHTTSCCC--CTTCEEEEETCTTSHHHHHHHHH----CCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred CCCHHHHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHh----CCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEE
Confidence 33566667777776433 46789999999999999888887 443 9999999999999999999998876 489
Q ss_pred EEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC----
Q 025211 100 INTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT---- 175 (256)
Q Consensus 100 ~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---- 175 (256)
+++|+.+. ++.+++||+|+++..+++. + ...+++.+.++|||||++++..+.
T Consensus 101 ~~~d~~~~--~~~~~~fD~v~~~~~l~~~-~---------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 156 (257)
T 3f4k_A 101 ITGSMDNL--PFQNEELDLIWSEGAIYNI-G---------------------FERGMNEWSKYLKKGGFIAVSEASWFTS 156 (257)
T ss_dssp EECCTTSC--SSCTTCEEEEEEESCSCCC-C---------------------HHHHHHHHHTTEEEEEEEEEEEEEESSS
T ss_pred EECChhhC--CCCCCCEEEEEecChHhhc-C---------------------HHHHHHHHHHHcCCCcEEEEEEeeccCC
Confidence 99999665 3345899999998776543 1 468899999999999999997743
Q ss_pred ----------------CCCHHHHHHHHHHcCCcEEEEEe
Q 025211 176 ----------------ANDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 176 ----------------~~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
.....++.+.+.+.||.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 157 ERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFI 195 (257)
T ss_dssp CCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 11345677888888988766543
No 30
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.75 E-value=1.4e-17 Score=129.28 Aligned_cols=135 Identities=15% Similarity=0.096 Sum_probs=99.0
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+...++ +++.+..+.+.+.+.+... ..++.+|||+|||+|.+++.+++. ++ .++|+|+++.+++.|++++
T Consensus 14 ~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~----~~--~v~~vD~~~~~~~~a~~~~ 83 (171)
T 1ws6_A 14 LKVPAS---ARPSPVRLRKALFDYLRLR-YPRRGRFLDPFAGSGAVGLEAASE----GW--EAVLVEKDPEAVRLLKENV 83 (171)
T ss_dssp ECCCTT---CCCCCHHHHHHHHHHHHHH-CTTCCEEEEETCSSCHHHHHHHHT----TC--EEEEECCCHHHHHHHHHHH
T ss_pred ecCCCC---CCCCHHHHHHHHHHHHHhh-ccCCCeEEEeCCCcCHHHHHHHHC----CC--eEEEEeCCHHHHHHHHHHH
Confidence 345556 4445566666666655320 026789999999999998888775 33 5999999999999999999
Q ss_pred HHcCCcceEEEcchhhchhhhc--CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh--hccccC
Q 025211 91 EAHNVHADLINTDIASGLEKRL--AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD--KLLSKR 166 (256)
Q Consensus 91 ~~~~~~~~~~~~d~~~~~~~~~--~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~Lkpg 166 (256)
..+++..+++++|+.+...... .++||+|+++|||. .. ...+++.+. ++|+||
T Consensus 84 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~---------------------~~~~~~~~~~~~~L~~g 140 (171)
T 1ws6_A 84 RRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA--MD---------------------LAALFGELLASGLVEAG 140 (171)
T ss_dssp HHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT--SC---------------------TTHHHHHHHHHTCEEEE
T ss_pred HHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc--hh---------------------HHHHHHHHHhhcccCCC
Confidence 9888755999999988644321 24799999999986 11 123344444 999999
Q ss_pred eEEEEEEeCCCC
Q 025211 167 GWLYLVTLTAND 178 (256)
Q Consensus 167 G~l~~~~~~~~~ 178 (256)
|++++.++....
T Consensus 141 G~~~~~~~~~~~ 152 (171)
T 1ws6_A 141 GLYVLQHPKDLY 152 (171)
T ss_dssp EEEEEEEETTSC
T ss_pred cEEEEEeCCccC
Confidence 999997775543
No 31
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.75 E-value=1.4e-16 Score=126.76 Aligned_cols=158 Identities=17% Similarity=0.190 Sum_probs=108.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
+++.+|||+|||+|.+++.+++.++ ++++++|+|+++.+++.|++++..+++. .+++++|+.+... ..+++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVG---ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK-YIDCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHC---TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG-TCCSCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh-hccCCceE
Confidence 5788999999999999998888752 4569999999999999999999998873 3899999877642 34578999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----CHHHHHHHHHHc---C
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-----DPSQICLQMMEK---G 190 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----~~~~~~~~~~~~---g 190 (256)
|++++||.+..+.... ........+++.+.++|||||+++++..... ....+..++... +
T Consensus 97 v~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (197)
T 3eey_A 97 VMFNLGYLPSGDHSIS------------TRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKK 164 (197)
T ss_dssp EEEEESBCTTSCTTCB------------CCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTT
T ss_pred EEEcCCcccCcccccc------------cCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCc
Confidence 9999999553332110 0112345789999999999999998764221 123344444433 4
Q ss_pred CcEEEEEe--cCCCCccEEEEEEEec
Q 025211 191 YAARIVVQ--RSTEEENLHIIKFWRD 214 (256)
Q Consensus 191 ~~~~~~~~--~~~~~~~~~l~~~~~~ 214 (256)
|....... ....++.+++++.++.
T Consensus 165 ~~v~~~~~~~~~~~pp~~~~~~~~~~ 190 (197)
T 3eey_A 165 FIVQRTDFINQANCPPILVCIEKISE 190 (197)
T ss_dssp EEEEEEEETTCCSCCCEEEEEEECCS
T ss_pred EEEEEEEeccCccCCCeEEEEEEccc
Confidence 55443332 2233445555554443
No 32
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.75 E-value=1.1e-16 Score=130.43 Aligned_cols=169 Identities=15% Similarity=0.149 Sum_probs=122.0
Q ss_pred ccCCccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH
Q 025211 13 SHPEVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE 91 (256)
Q Consensus 13 ~~~~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~ 91 (256)
.....|+-+.. ...|+..++.-+..+..+++.+|||+|||+|.++..++..+ +|+..|+|+|+++.|++.++++..
T Consensus 47 ~~~~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~V---G~~G~V~avD~s~~~~~~l~~~a~ 123 (233)
T 4df3_A 47 YNGEEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDII---GPRGRIYGVEFAPRVMRDLLTVVR 123 (233)
T ss_dssp ETTEEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHH---CTTCEEEEEECCHHHHHHHHHHST
T ss_pred cCCceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHh---CCCceEEEEeCCHHHHHHHHHhhH
Confidence 34445666665 66788888877777777899999999999999999999987 467799999999999999988765
Q ss_pred HcCCcceEEEcchhhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211 92 AHNVHADLINTDIASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 92 ~~~~~~~~~~~d~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 170 (256)
..+ +...+.+|...... +...+++|+|+++.++.. ....++.++.+.|||||+++
T Consensus 124 ~~~-ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~-----------------------~~~~~l~~~~r~LKpGG~lv 179 (233)
T 4df3_A 124 DRR-NIFPILGDARFPEKYRHLVEGVDGLYADVAQPE-----------------------QAAIVVRNARFFLRDGGYML 179 (233)
T ss_dssp TCT-TEEEEESCTTCGGGGTTTCCCEEEEEECCCCTT-----------------------HHHHHHHHHHHHEEEEEEEE
T ss_pred hhc-CeeEEEEeccCccccccccceEEEEEEeccCCh-----------------------hHHHHHHHHHHhccCCCEEE
Confidence 432 23677778766532 334578999999877531 14678999999999999999
Q ss_pred EEEeCCC---------CHHHHHHHHHHcCCcEEEEEec-CCCCccEEE
Q 025211 171 LVTLTAN---------DPSQICLQMMEKGYAARIVVQR-STEEENLHI 208 (256)
Q Consensus 171 ~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l 208 (256)
++..... ......+.+++.||+......- .....++.+
T Consensus 180 I~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv 227 (233)
T 4df3_A 180 MAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMI 227 (233)
T ss_dssp EEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEE
T ss_pred EEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEE
Confidence 8653221 1234566778889987665432 233344443
No 33
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=1e-16 Score=129.56 Aligned_cols=144 Identities=13% Similarity=0.169 Sum_probs=112.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..+++.. .++.+++|+|+++.+++.+++++...++. ..++.+|+.+.. +.+++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v 110 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMV---GEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP--LPDNTVDFI 110 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHH---TTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--SCSSCEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHh---CCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--CCCCCeeEE
Confidence 577899999999999988888874 25679999999999999999999888876 489999987753 345789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------------CHHHHHHHHH
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------------DPSQICLQMM 187 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------~~~~~~~~~~ 187 (256)
+++..+.+..+ ...+++.+.++|+|||+++++..... ..+++.+.+.
T Consensus 111 ~~~~~l~~~~~---------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (219)
T 3dh0_A 111 FMAFTFHELSE---------------------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILE 169 (219)
T ss_dssp EEESCGGGCSS---------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHH
T ss_pred EeehhhhhcCC---------------------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHH
Confidence 99876554322 46889999999999999999764322 3578999999
Q ss_pred HcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 188 EKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 188 ~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
+.||+......... ..+.+.++|
T Consensus 170 ~~Gf~~~~~~~~~~---~~~~~~~~k 192 (219)
T 3dh0_A 170 DAGIRVGRVVEVGK---YCFGVYAMI 192 (219)
T ss_dssp HTTCEEEEEEEETT---TEEEEEEEC
T ss_pred HCCCEEEEEEeeCC---ceEEEEEEe
Confidence 99999776654432 334444444
No 34
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.74 E-value=1.9e-17 Score=134.46 Aligned_cols=130 Identities=12% Similarity=0.139 Sum_probs=100.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhh-hcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEK-RLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~-~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++.+++. .|++.|+|+|+++.+++.|++++..+++.+ .++++|+.+.++. +.+++||.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~----~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKD----RPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHH----CTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHH----CCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChhe
Confidence 46789999999999999988887 788899999999999999999999988865 9999999886543 45689999
Q ss_pred EEEC--CCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHc
Q 025211 119 MVVN--PPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEK 189 (256)
Q Consensus 119 Ii~n--pP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 189 (256)
|+++ +||...... ..++ ....+++.+.++|||||++++.+......+++...+...
T Consensus 109 v~~~~~~p~~~~~~~-------~rr~--------~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 109 VQLFFPDPWHKARHN-------KRRI--------VQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSI 166 (218)
T ss_dssp EEEESCCCCCSGGGG-------GGSS--------CSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred EEEeCCCCccchhhh-------hhhh--------hhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 9998 455322110 1111 124689999999999999999876444455566666543
No 35
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=3.5e-16 Score=125.04 Aligned_cols=140 Identities=13% Similarity=0.085 Sum_probs=109.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
.+.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++. ....++++|+.+. ++.+++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~--~~~~~~fD~v~~ 108 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL------GHQIEGLEPATRLVELARQTH----PSVTFHHGTITDL--SDSPKRWAGLLA 108 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT------TCCEEEECCCHHHHHHHHHHC----TTSEEECCCGGGG--GGSCCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhC----CCCeEEeCccccc--ccCCCCeEEEEe
Confidence 3789999999999998777765 458999999999999998873 2348999998875 334689999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------CHHHHHHHH
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------------DPSQICLQM 186 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------~~~~~~~~~ 186 (256)
+..+.+.+... ...+++.+.++|+|||++++...... ...++.+.+
T Consensus 109 ~~~l~~~~~~~-------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (203)
T 3h2b_A 109 WYSLIHMGPGE-------------------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQAL 169 (203)
T ss_dssp ESSSTTCCTTT-------------------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHH
T ss_pred hhhHhcCCHHH-------------------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHH
Confidence 87766554222 57899999999999999999775433 367899999
Q ss_pred HHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 187 MEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 187 ~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
.+.||+...+..... .++-++....+
T Consensus 170 ~~~Gf~~~~~~~~~~-~p~~~l~~~~~ 195 (203)
T 3h2b_A 170 ETAGFQVTSSHWDPR-FPHAYLTAEAS 195 (203)
T ss_dssp HHTTEEEEEEEECTT-SSEEEEEEEEC
T ss_pred HHCCCcEEEEEecCC-Ccchhhhhhhh
Confidence 999999888776655 55555554444
No 36
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.74 E-value=7.4e-17 Score=127.20 Aligned_cols=141 Identities=22% Similarity=0.287 Sum_probs=111.2
Q ss_pred cCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-c-c
Q 025211 20 PCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-H-A 97 (256)
Q Consensus 20 p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~-~ 97 (256)
|++....+.+.+++.+. ..++.+|||+|||+|.+++.++.. . .+++++|+++.+++.+++++..++. . .
T Consensus 14 ~~~~~~~~~~~~~~~~~---~~~~~~vldiG~G~G~~~~~l~~~----~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~ 84 (192)
T 1l3i_A 14 PGPTAMEVRCLIMCLAE---PGKNDVAVDVGCGTGGVTLELAGR----V--RRVYAIDRNPEAISTTEMNLQRHGLGDNV 84 (192)
T ss_dssp CCCCCHHHHHHHHHHHC---CCTTCEEEEESCTTSHHHHHHHTT----S--SEEEEEESCHHHHHHHHHHHHHTTCCTTE
T ss_pred CCCChHHHHHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHh----c--CEEEEEECCHHHHHHHHHHHHHcCCCcce
Confidence 33445667777777654 257889999999999998777765 3 5999999999999999999998887 3 3
Q ss_pred eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
.+.++|+.+..+. .++||+|+++.++.. ...+++.+.++|+|||++++..+...
T Consensus 85 ~~~~~d~~~~~~~--~~~~D~v~~~~~~~~------------------------~~~~l~~~~~~l~~gG~l~~~~~~~~ 138 (192)
T 1l3i_A 85 TLMEGDAPEALCK--IPDIDIAVVGGSGGE------------------------LQEILRIIKDKLKPGGRIIVTAILLE 138 (192)
T ss_dssp EEEESCHHHHHTT--SCCEEEEEESCCTTC------------------------HHHHHHHHHHTEEEEEEEEEEECBHH
T ss_pred EEEecCHHHhccc--CCCCCEEEECCchHH------------------------HHHHHHHHHHhcCCCcEEEEEecCcc
Confidence 8899998774332 158999999877521 47889999999999999999877666
Q ss_pred CHHHHHHHHHHcCCcEEE
Q 025211 178 DPSQICLQMMEKGYAARI 195 (256)
Q Consensus 178 ~~~~~~~~~~~~g~~~~~ 195 (256)
....+.+.+.+.||....
T Consensus 139 ~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 139 TKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp HHHHHHHHHHHTTCCCEE
T ss_pred hHHHHHHHHHHCCCceEE
Confidence 667888889999986443
No 37
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.74 E-value=4.7e-17 Score=143.00 Aligned_cols=139 Identities=16% Similarity=0.160 Sum_probs=104.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
+++.+|||+|||+|.+++.++.. ++.|+|+|+|+.+++.|++|+..+++..++.++|+.+.+... .+.||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~------ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~-~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK------GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGL-EGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTC-CCCEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHh-cCCCCEEE
Confidence 35899999999999999988875 346999999999999999999999988788899998876543 34499999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC-HH----HHHHHHHHcCCcEEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND-PS----QICLQMMEKGYAARI 195 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~----~~~~~~~~~g~~~~~ 195 (256)
+|||++..+.... . .....+..++..+.++|+|||++++++++... .+ .+...+.+.|.....
T Consensus 286 ~dpP~f~~~~~~~-----~-------~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i 353 (393)
T 4dmg_A 286 LDPPTLVKRPEEL-----P-------AMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRV 353 (393)
T ss_dssp ECCCCCCSSGGGH-----H-------HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCCcCCCCHHHH-----H-------HHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEE
Confidence 9999976543210 0 11234678899999999999999977765542 22 334445555665554
Q ss_pred EEe
Q 025211 196 VVQ 198 (256)
Q Consensus 196 ~~~ 198 (256)
+..
T Consensus 354 ~~~ 356 (393)
T 4dmg_A 354 HRV 356 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 38
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.74 E-value=1.9e-16 Score=138.52 Aligned_cols=162 Identities=16% Similarity=0.102 Sum_probs=117.5
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEE
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLIN 101 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~ 101 (256)
.+.+++.++... + .++.+|||+|||+|.++++++.. .+.+.|+|+|+++.+++.|++|+..+++. .++++
T Consensus 203 ~~~la~~l~~~~--~--~~~~~vLD~gCGsG~~~i~~a~~----~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~ 274 (373)
T 3tm4_A 203 KASIANAMIELA--E--LDGGSVLDPMCGSGTILIELALR----RYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQ 274 (373)
T ss_dssp CHHHHHHHHHHH--T--CCSCCEEETTCTTCHHHHHHHHT----TCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEE
T ss_pred cHHHHHHHHHhh--c--CCCCEEEEccCcCcHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 566667666654 2 47889999999999999998886 44458999999999999999999999983 49999
Q ss_pred cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHH
Q 025211 102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQ 181 (256)
Q Consensus 102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 181 (256)
+|+.+... ..++||+|++||||....... ..-...+..+++.+.++| +|.++++++ ....
T Consensus 275 ~D~~~~~~--~~~~fD~Ii~npPyg~r~~~~-------------~~~~~ly~~~~~~l~r~l--~g~~~~i~~---~~~~ 334 (373)
T 3tm4_A 275 GDATQLSQ--YVDSVDFAISNLPYGLKIGKK-------------SMIPDLYMKFFNELAKVL--EKRGVFITT---EKKA 334 (373)
T ss_dssp CCGGGGGG--TCSCEEEEEEECCCC-------------------CCHHHHHHHHHHHHHHHE--EEEEEEEES---CHHH
T ss_pred CChhhCCc--ccCCcCEEEECCCCCcccCcc-------------hhHHHHHHHHHHHHHHHc--CCeEEEEEC---CHHH
Confidence 99988642 347899999999997543211 011234578889999988 666666554 4567
Q ss_pred HHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 182 ICLQMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 182 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
+.+.+.+.||+.........+.-...++....
T Consensus 335 ~~~~~~~~G~~~~~~~~~~nG~l~~~~~~~~~ 366 (373)
T 3tm4_A 335 IEEAIAENGFEIIHHRVIGHGGLMVHLYVVKL 366 (373)
T ss_dssp HHHHHHHTTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEEEEcCCEEEEEEeccC
Confidence 77888889998766655555554555555443
No 39
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.74 E-value=4.9e-17 Score=131.59 Aligned_cols=155 Identities=12% Similarity=0.097 Sum_probs=105.4
Q ss_pred CCccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211 15 PEVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH 93 (256)
Q Consensus 15 ~~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~ 93 (256)
.+.+.+... .....+++.+.+.. .++.+|||+|||+|.++..++.. ++..+++|+|+++.+++.|++++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~~~~a~~~~~~~ 76 (219)
T 3jwg_A 4 NEETEKKLNLNQQRLGTVVAVLKS---VNAKKVIDLGCGEGNLLSLLLKD----KSFEQITGVDVSYSVLERAKDRLKID 76 (219)
T ss_dssp --------CHHHHHHHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHTS----TTCCEEEEEESCHHHHHHHHHHHTGG
T ss_pred cccCCcCCcchHHHHHHHHHHHhh---cCCCEEEEecCCCCHHHHHHHhc----CCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 344444443 44555666665532 46789999999999988777664 56679999999999999999998776
Q ss_pred CCc------ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe
Q 025211 94 NVH------ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG 167 (256)
Q Consensus 94 ~~~------~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 167 (256)
++. .+++++|+... +...++||+|+++..+.+.+++ ....+++.+.++|||||
T Consensus 77 ~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~-------------------~~~~~l~~~~~~LkpgG 135 (219)
T 3jwg_A 77 RLPEMQRKRISLFQSSLVYR--DKRFSGYDAATVIEVIEHLDEN-------------------RLQAFEKVLFEFTRPQT 135 (219)
T ss_dssp GSCHHHHTTEEEEECCSSSC--CGGGTTCSEEEEESCGGGCCHH-------------------HHHHHHHHHHTTTCCSE
T ss_pred ccccccCcceEEEeCccccc--ccccCCCCEEEEHHHHHhCCHH-------------------HHHHHHHHHHHhhCCCE
Confidence 653 48899998544 2234789999997665544321 24688999999999999
Q ss_pred EEEEEEeCCC---------------------CHHHHH----HHHHHcCCcEEEEE
Q 025211 168 WLYLVTLTAN---------------------DPSQIC----LQMMEKGYAARIVV 197 (256)
Q Consensus 168 ~l~~~~~~~~---------------------~~~~~~----~~~~~~g~~~~~~~ 197 (256)
+++.+..... ...++. ..+.+.||.+...-
T Consensus 136 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 136 VIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp EEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred EEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEe
Confidence 7666432211 234555 66778898765543
No 40
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.74 E-value=1.2e-16 Score=129.57 Aligned_cols=142 Identities=17% Similarity=0.199 Sum_probs=110.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++.+++. +|..+|+|+|+++.+++.|++|+..+++.. ++..+|..+..++ ..+||+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~----~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--~~~~D~ 87 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVER----GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--TDQVSV 87 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHT----TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc--CcCCCE
Confidence 36789999999999999998886 667789999999999999999999999864 8999999876543 126998
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
|+.. |. |......++..+.+.|+++|++++ .+. .....+++++.+.||.......
T Consensus 88 Ivia----------------------G~-Gg~~i~~Il~~~~~~L~~~~~lVl-q~~-~~~~~vr~~L~~~Gf~i~~e~l 142 (225)
T 3kr9_A 88 ITIA----------------------GM-GGRLIARILEEGLGKLANVERLIL-QPN-NREDDLRIWLQDHGFQIVAESI 142 (225)
T ss_dssp EEEE----------------------EE-CHHHHHHHHHHTGGGCTTCCEEEE-EES-SCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEc----------------------CC-ChHHHHHHHHHHHHHhCCCCEEEE-ECC-CCHHHHHHHHHHCCCEEEEEEE
Confidence 8752 11 234578999999999999999888 443 5688999999999998766544
Q ss_pred cCCCCccEEEEEEEe
Q 025211 199 RSTEEENLHIIKFWR 213 (256)
Q Consensus 199 ~~~~~~~~~l~~~~~ 213 (256)
.......+.++...+
T Consensus 143 v~e~~~~Yeii~~~~ 157 (225)
T 3kr9_A 143 LEEAGKFYEILVVEA 157 (225)
T ss_dssp EEETTEEEEEEEEEE
T ss_pred EEECCEEEEEEEEEe
Confidence 333333444555544
No 41
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.74 E-value=7.3e-17 Score=139.75 Aligned_cols=166 Identities=17% Similarity=0.249 Sum_probs=114.5
Q ss_pred ccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhccc-CCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 17 VYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQE-VPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 17 ~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~-~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
.|+|+....++... ++.+. ...++.+|||+|||+|.+++.+++.+... ..+..++|+|+++.+++.|+.|+..+++
T Consensus 108 ~~TP~~i~~~~~~l-l~~l~--~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~ 184 (344)
T 2f8l_A 108 QMTPDSIGFIVAYL-LEKVI--QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ 184 (344)
T ss_dssp CCCCHHHHHHHHHH-HHHHH--TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHH-HHHhc--CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC
Confidence 67786444444333 33221 12367899999999999999988875421 1126899999999999999999998888
Q ss_pred cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhc-CCCCcH-HHHHHHHHHHhhccccCeEEEEEE
Q 025211 96 HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWA-GGENGR-AVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 96 ~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
...++++|..... ...+||+|++||||...+..+.. ..+. +...+. .....+++.+.+.|+|||+++++.
T Consensus 185 ~~~i~~~D~l~~~---~~~~fD~Ii~NPPfg~~~~~~~~-----~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 185 KMTLLHQDGLANL---LVDPVDVVISDLPVGYYPDDENA-----KTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CCEEEESCTTSCC---CCCCEEEEEEECCCSEESCHHHH-----TTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEECCCCCcc---ccCCccEEEECCCCCCcCchhhh-----hhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 6699999987643 24689999999998654332211 0111 111111 123468999999999999999988
Q ss_pred eC----CCCHHHHHHHHHHcCCcE
Q 025211 174 LT----ANDPSQICLQMMEKGYAA 193 (256)
Q Consensus 174 ~~----~~~~~~~~~~~~~~g~~~ 193 (256)
+. ......+++++.+.++..
T Consensus 257 p~~~~~~~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 257 PDAMFGTSDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp EGGGGGSTTHHHHHHHHHHHEEEE
T ss_pred CchhcCCchHHHHHHHHHhCCeEE
Confidence 52 345678888888877643
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.74 E-value=1e-17 Score=134.45 Aligned_cols=130 Identities=12% Similarity=0.105 Sum_probs=93.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-------------CCcceEEEcchhhc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-------------NVHADLINTDIASG 107 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-------------~~~~~~~~~d~~~~ 107 (256)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++.... ....+++++|+.+.
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 46789999999999998888875 458999999999999999875431 22348999999876
Q ss_pred hhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----------
Q 025211 108 LEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------- 177 (256)
Q Consensus 108 ~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------- 177 (256)
... ..++||+|++...+++.+. .....+++++.++|||||+++++.....
T Consensus 95 ~~~-~~~~fD~v~~~~~l~~l~~-------------------~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~ 154 (203)
T 1pjz_A 95 TAR-DIGHCAAFYDRAAMIALPA-------------------DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFS 154 (203)
T ss_dssp THH-HHHSEEEEEEESCGGGSCH-------------------HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCC
T ss_pred Ccc-cCCCEEEEEECcchhhCCH-------------------HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCC
Confidence 322 0168999999765543322 1246789999999999999555443321
Q ss_pred -CHHHHHHHHHHcCCcEEEEE
Q 025211 178 -DPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 178 -~~~~~~~~~~~~g~~~~~~~ 197 (256)
..+++...+.+ ||+...+.
T Consensus 155 ~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 155 VPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp CCHHHHHHTSCS-SEEEEEEE
T ss_pred CCHHHHHHHhcC-CcEEEEec
Confidence 24566666665 77655444
No 43
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.73 E-value=1.4e-16 Score=129.51 Aligned_cols=143 Identities=17% Similarity=0.149 Sum_probs=111.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|+|+|||+|.+++.+++. ++...|+|+|+++.+++.|++|+..+++.. ++..+|..+...+ ..+||+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~----~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--~~~~D~ 93 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQM----GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--ADNIDT 93 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHT----TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCE
T ss_pred CCCCEEEEECCchHHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc--ccccCE
Confidence 46789999999999999998886 566789999999999999999999999864 8999999887543 237999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
|+.. |. |-.....++....+.|+++|++++. + ......+++++.+.||.......
T Consensus 94 Ivia----------------------Gm-Gg~lI~~IL~~~~~~l~~~~~lIlq-p-~~~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 94 ITIC----------------------GM-GGRLIADILNNDIDKLQHVKTLVLQ-P-NNREDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp EEEE----------------------EE-CHHHHHHHHHHTGGGGTTCCEEEEE-E-SSCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEe----------------------CC-chHHHHHHHHHHHHHhCcCCEEEEE-C-CCChHHHHHHHHHCCCEEEEEEE
Confidence 7641 11 2245788999999999999998883 4 34588999999999998766554
Q ss_pred cCCCCccEEEEEEEec
Q 025211 199 RSTEEENLHIIKFWRD 214 (256)
Q Consensus 199 ~~~~~~~~~l~~~~~~ 214 (256)
.......+.++...++
T Consensus 149 v~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 149 LTENDKRYEILVVKHG 164 (230)
T ss_dssp EEC--CEEEEEEEEEC
T ss_pred EEECCEEEEEEEEEeC
Confidence 4444444555555553
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=5.8e-17 Score=126.68 Aligned_cols=138 Identities=12% Similarity=0.080 Sum_probs=105.4
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d 103 (256)
+.+...+++.+. ..++.+|||+|||+|.+++.++.. .++++|+|+|+++.+++.|++++..+++. .-++.+|
T Consensus 11 ~~~~~~~~~~~~---~~~~~~vldiG~G~G~~~~~l~~~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d 83 (178)
T 3hm2_A 11 QHVRALAISALA---PKPHETLWDIGGGSGSIAIEWLRS----TPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG 83 (178)
T ss_dssp HHHHHHHHHHHC---CCTTEEEEEESTTTTHHHHHHHTT----SSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC
T ss_pred HHHHHHHHHHhc---ccCCCeEEEeCCCCCHHHHHHHHH----CCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc
Confidence 344455555543 257789999999999998777765 56789999999999999999999988875 2267778
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHH
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQIC 183 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 183 (256)
..+..+. ..++||+|+++.++.+ ..+++.+.++|+|||++++............
T Consensus 84 ~~~~~~~-~~~~~D~i~~~~~~~~-------------------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~ 137 (178)
T 3hm2_A 84 APRAFDD-VPDNPDVIFIGGGLTA-------------------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLW 137 (178)
T ss_dssp TTGGGGG-CCSCCSEEEECC-TTC-------------------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHH
T ss_pred hHhhhhc-cCCCCCEEEECCcccH-------------------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHH
Confidence 7664432 2378999999877542 3568999999999999999776665666788
Q ss_pred HHHHHcCCcEEE
Q 025211 184 LQMMEKGYAARI 195 (256)
Q Consensus 184 ~~~~~~g~~~~~ 195 (256)
..+.+.++....
T Consensus 138 ~~~~~~~~~~~~ 149 (178)
T 3hm2_A 138 ALRKQFGGTISS 149 (178)
T ss_dssp HHHHHHCCEEEE
T ss_pred HHHHHcCCeeEE
Confidence 888888876544
No 45
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.73 E-value=1e-16 Score=132.62 Aligned_cols=144 Identities=13% Similarity=0.043 Sum_probs=111.2
Q ss_pred CCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ce
Q 025211 21 CDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--AD 98 (256)
Q Consensus 21 ~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~ 98 (256)
++.....++.++..+. ..++.+|||+|||+|.++..++.. . +++++|+|+++.+++.|++++...++. .+
T Consensus 18 ~~~~~~~~~~l~~~~~---~~~~~~VLDiGcG~G~~~~~la~~----~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~ 89 (256)
T 1nkv_A 18 NPFTEEKYATLGRVLR---MKPGTRILDLGSGSGEMLCTWARD----H-GITGTGIDMSSLFTAQAKRRAEELGVSERVH 89 (256)
T ss_dssp SSCCHHHHHHHHHHTC---CCTTCEEEEETCTTCHHHHHHHHH----T-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEE
T ss_pred CCCCHHHHHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHh----c-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceE
Confidence 3345666777777654 257889999999999999888876 3 458999999999999999999988875 48
Q ss_pred EEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC--
Q 025211 99 LINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-- 176 (256)
Q Consensus 99 ~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-- 176 (256)
++++|+.+.. + +++||+|++...+++.++ ...+++++.++|||||++++..+..
T Consensus 90 ~~~~d~~~~~--~-~~~fD~V~~~~~~~~~~~---------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (256)
T 1nkv_A 90 FIHNDAAGYV--A-NEKCDVAACVGATWIAGG---------------------FAGAEELLAQSLKPGGIMLIGEPYWRQ 145 (256)
T ss_dssp EEESCCTTCC--C-SSCEEEEEEESCGGGTSS---------------------SHHHHHHHTTSEEEEEEEEEEEEEETT
T ss_pred EEECChHhCC--c-CCCCCEEEECCChHhcCC---------------------HHHHHHHHHHHcCCCeEEEEecCcccC
Confidence 9999998753 2 578999999655443322 3688999999999999999976422
Q ss_pred -------------------CCHHHHHHHHHHcCCcEEEE
Q 025211 177 -------------------NDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 177 -------------------~~~~~~~~~~~~~g~~~~~~ 196 (256)
....++.+.+.+.||..+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 146 LPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp CCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred CCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 12357788888889876543
No 46
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.73 E-value=7.1e-17 Score=139.76 Aligned_cols=140 Identities=23% Similarity=0.349 Sum_probs=104.5
Q ss_pred eccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH
Q 025211 12 SSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE 91 (256)
Q Consensus 12 ~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~ 91 (256)
...|++|.+.. .....+.+++.+. ..++.+|||+|||+|.+++.+++. +|+++|+++|+++.+++.+++++.
T Consensus 170 ~~~~gvf~~~~-~d~~~~~ll~~l~---~~~~~~VLDlGcG~G~~~~~la~~----~~~~~v~~vD~s~~~l~~a~~~~~ 241 (343)
T 2pjd_A 170 KTLPGVFSRDG-LDVGSQLLLSTLT---PHTKGKVLDVGCGAGVLSVAFARH----SPKIRLTLCDVSAPAVEASRATLA 241 (343)
T ss_dssp EECTTCTTSSS-CCHHHHHHHHHSC---TTCCSBCCBTTCTTSHHHHHHHHH----CTTCBCEEEESBHHHHHHHHHHHH
T ss_pred EecCCccCCCC-CcHHHHHHHHhcC---cCCCCeEEEecCccCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHH
Confidence 34566555432 1222344444442 135679999999999999888877 677899999999999999999999
Q ss_pred HcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 92 AHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 92 ~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
.+++..+++.+|+.+.. +++||+|++||||+.... ........++..+.++|||||++++
T Consensus 242 ~~~~~~~~~~~d~~~~~----~~~fD~Iv~~~~~~~g~~----------------~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 242 ANGVEGEVFASNVFSEV----KGRFDMIISNPPFHDGMQ----------------TSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp HTTCCCEEEECSTTTTC----CSCEEEEEECCCCCSSSH----------------HHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HhCCCCEEEEccccccc----cCCeeEEEECCCcccCcc----------------CCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 98887788899987642 468999999999863211 0122367899999999999999999
Q ss_pred EEeCCCCH
Q 025211 172 VTLTANDP 179 (256)
Q Consensus 172 ~~~~~~~~ 179 (256)
+.+.....
T Consensus 302 ~~~~~~~~ 309 (343)
T 2pjd_A 302 VANAFLPY 309 (343)
T ss_dssp EEETTSSH
T ss_pred EEcCCCCc
Confidence 87755443
No 47
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.73 E-value=1.2e-16 Score=137.47 Aligned_cols=152 Identities=12% Similarity=0.066 Sum_probs=107.5
Q ss_pred chHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc---ceE
Q 025211 23 DSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH---ADL 99 (256)
Q Consensus 23 ~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~---~~~ 99 (256)
++....+++.+.+.. ..++.+|||+|||+|.+++.++.. ++.|+++|+|+.+++.|++|+..+++. .++
T Consensus 136 dq~~~~~~l~~~~~~--~~~~~~VLDlgcGtG~~sl~la~~------ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~ 207 (332)
T 2igt_A 136 EQIVHWEWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAA------GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRW 207 (332)
T ss_dssp GGHHHHHHHHHHHHH--SSSCCEEEEETCTTCHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEE
T ss_pred HHHHHHHHHHHHHHh--cCCCCcEEEcccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEE
Confidence 456655666665431 136789999999999999888874 349999999999999999999999875 489
Q ss_pred EEcchhhchhhh--cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 100 INTDIASGLEKR--LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 100 ~~~d~~~~~~~~--~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
+++|+.+..... ..++||+|++|||++........ ......+..++..+.++|+|||++++......
T Consensus 208 i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~-----------~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 208 ICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEV-----------WQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp ECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCE-----------EEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred EECcHHHHHHHHHhcCCCceEEEECCccccCCchHHH-----------HHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 999998875432 14689999999997643321100 01123467889999999999999777554322
Q ss_pred --CHHHHHHHHH----HcCCcE
Q 025211 178 --DPSQICLQMM----EKGYAA 193 (256)
Q Consensus 178 --~~~~~~~~~~----~~g~~~ 193 (256)
....+.+.+. +.|+..
T Consensus 277 ~~~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 277 RASFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp TSCHHHHHHHHHHHTTTSCSEE
T ss_pred CCCHHHHHHHHHHHHHHcCCeE
Confidence 2334444444 456654
No 48
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.73 E-value=3.2e-17 Score=137.71 Aligned_cols=156 Identities=15% Similarity=0.091 Sum_probs=117.6
Q ss_pred eccCC--ccccCCchHHHHHHHHHhhc------------ccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEe
Q 025211 12 SSHPE--VYEPCDDSFALVDALLADRI------------NLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATD 77 (256)
Q Consensus 12 ~~~~~--~~~p~~~~~~l~~~l~~~~~------------~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD 77 (256)
...++ ++.++++++.+.+.+..... .+...++.+|||+|||+|.+++.++..+ +|+.+++++|
T Consensus 68 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~---~~~~~v~~vD 144 (277)
T 1o54_A 68 RTSAGKKGYILIPSLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAV---GSSGKVFAYE 144 (277)
T ss_dssp ECTTCCEEEEECCCHHHHHHTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHT---TTTCEEEEEC
T ss_pred EEcCCcEEEEeCCCHHHHHhhccccCCccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHh---CCCcEEEEEE
Confidence 34444 67888887777653322110 1112567899999999999998888764 3567999999
Q ss_pred CCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHH
Q 025211 78 INPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKI 155 (256)
Q Consensus 78 ~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
+++.+++.|++++..+++. .+++.+|+.+.. .+++||+|++++|. ...+
T Consensus 145 ~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~D~V~~~~~~--------------------------~~~~ 195 (277)
T 1o54_A 145 KREEFAKLAESNLTKWGLIERVTIKVRDISEGF---DEKDVDALFLDVPD--------------------------PWNY 195 (277)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC---SCCSEEEEEECCSC--------------------------GGGT
T ss_pred CCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc---cCCccCEEEECCcC--------------------------HHHH
Confidence 9999999999999988873 388999988763 23689999999874 2366
Q ss_pred HHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEec
Q 025211 156 LPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQR 199 (256)
Q Consensus 156 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 199 (256)
+..+.++|+|||++++..+......++.+.+.+.||........
T Consensus 196 l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 196 IDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp HHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECC
T ss_pred HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEE
Confidence 88899999999999998875555667788888889886665543
No 49
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.73 E-value=5.7e-17 Score=130.03 Aligned_cols=128 Identities=13% Similarity=0.150 Sum_probs=93.0
Q ss_pred ccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-c
Q 025211 19 EPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-A 97 (256)
Q Consensus 19 ~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~ 97 (256)
.+++.+..+.+.+++.+... .++.+|||+|||+|.+++.++.. +. ..|+|+|+++.+++.|++|+..+++. .
T Consensus 33 ~~rp~~~~~~~~l~~~l~~~--~~~~~vLDlgcG~G~~~~~l~~~----~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v 105 (202)
T 2fpo_A 33 GLRPTTDRVRETLFNWLAPV--IVDAQCLDCFAGSGALGLEALSR----YA-AGATLIEMDRAVSQQLIKNLATLKAGNA 105 (202)
T ss_dssp -----CHHHHHHHHHHHHHH--HTTCEEEETTCTTCHHHHHHHHT----TC-SEEEEECSCHHHHHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHHHHhh--cCCCeEEEeCCCcCHHHHHHHhc----CC-CEEEEEECCHHHHHHHHHHHHHcCCCcE
Confidence 34444566666666655321 25789999999999998876654 22 38999999999999999999998874 4
Q ss_pred eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhh--ccccCeEEEEEEeC
Q 025211 98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADK--LLSKRGWLYLVTLT 175 (256)
Q Consensus 98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~ 175 (256)
+++++|+.+..+. ..++||+|+++|||.. .. ...+++.+.+ +|+|||++++....
T Consensus 106 ~~~~~D~~~~~~~-~~~~fD~V~~~~p~~~-~~---------------------~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 106 RVVNSNAMSFLAQ-KGTPHNIVFVDPPFRR-GL---------------------LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEECSCHHHHHSS-CCCCEEEEEECCSSST-TT---------------------HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred EEEECCHHHHHhh-cCCCCCEEEECCCCCC-Cc---------------------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 9999999875432 3468999999999752 11 3455666644 69999999987764
Q ss_pred C
Q 025211 176 A 176 (256)
Q Consensus 176 ~ 176 (256)
.
T Consensus 163 ~ 163 (202)
T 2fpo_A 163 E 163 (202)
T ss_dssp G
T ss_pred C
Confidence 3
No 50
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.73 E-value=3.4e-16 Score=122.53 Aligned_cols=136 Identities=21% Similarity=0.254 Sum_probs=109.1
Q ss_pred chHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEE
Q 025211 23 DSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLIN 101 (256)
Q Consensus 23 ~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~ 101 (256)
....+.+.+++.+. ..++.+|||+|||+|.++..++. ++.+++|+|+++.+++.+++++..+++.. ++++
T Consensus 19 ~~~~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 89 (183)
T 2yxd_A 19 TKEEIRAVSIGKLN---LNKDDVVVDVGCGSGGMTVEIAK------RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK 89 (183)
T ss_dssp CCHHHHHHHHHHHC---CCTTCEEEEESCCCSHHHHHHHT------TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHHHHHHHHcC---CCCCCEEEEeCCCCCHHHHHHHh------cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 35677777777764 24678999999999998877665 35699999999999999999999988754 8999
Q ss_pred cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHH
Q 025211 102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQ 181 (256)
Q Consensus 102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 181 (256)
+|+.+..+ +++||+|+++++ .. ...++..+.++ |||++++..+......+
T Consensus 90 ~d~~~~~~---~~~~D~i~~~~~----~~---------------------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~ 139 (183)
T 2yxd_A 90 GRAEDVLD---KLEFNKAFIGGT----KN---------------------IEKIIEILDKK--KINHIVANTIVLENAAK 139 (183)
T ss_dssp SCHHHHGG---GCCCSEEEECSC----SC---------------------HHHHHHHHHHT--TCCEEEEEESCHHHHHH
T ss_pred CCcccccc---CCCCcEEEECCc----cc---------------------HHHHHHHHhhC--CCCEEEEEecccccHHH
Confidence 99987433 368999999877 11 56788888887 99999998876666678
Q ss_pred HHHHHHHcCCcEEEEE
Q 025211 182 ICLQMMEKGYAARIVV 197 (256)
Q Consensus 182 ~~~~~~~~g~~~~~~~ 197 (256)
+.+.+++.||....+.
T Consensus 140 ~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 140 IINEFESRGYNVDAVN 155 (183)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCeEEEEE
Confidence 8999999998766554
No 51
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.73 E-value=9.9e-17 Score=131.03 Aligned_cols=146 Identities=12% Similarity=0.164 Sum_probs=109.9
Q ss_pred HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211 27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS 106 (256)
Q Consensus 27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~ 106 (256)
+.+.++..+.. ..++.+|||+|||+|.++..++.. .|+.+++|+|+++.+++.|++++...+ ...++++|+.+
T Consensus 31 ~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~ 103 (234)
T 3dtn_A 31 FYGVSVSIASV--DTENPDILDLGAGTGLLSAFLMEK----YPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSK 103 (234)
T ss_dssp HHHHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHH----CTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTT
T ss_pred HHHHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhc
Confidence 33555555432 246799999999999998888887 678899999999999999999876555 45899999987
Q ss_pred chhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------
Q 025211 107 GLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------- 177 (256)
Q Consensus 107 ~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------- 177 (256)
...+ ++||+|+++.++.+.++.+ ...+++++.++|||||++++......
T Consensus 104 ~~~~---~~fD~v~~~~~l~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 161 (234)
T 3dtn_A 104 YDFE---EKYDMVVSALSIHHLEDED-------------------KKELYKRSYSILKESGIFINADLVHGETAFIENLN 161 (234)
T ss_dssp CCCC---SCEEEEEEESCGGGSCHHH-------------------HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHH
T ss_pred cCCC---CCceEEEEeCccccCCHHH-------------------HHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHH
Confidence 6332 7899999987766543321 34689999999999999999764321
Q ss_pred -------------------------------CHHHHHHHHHHcCCcEEEEEecCC
Q 025211 178 -------------------------------DPSQICLQMMEKGYAARIVVQRST 201 (256)
Q Consensus 178 -------------------------------~~~~~~~~~~~~g~~~~~~~~~~~ 201 (256)
..+++.+++++.||..+.+.-...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 216 (234)
T 3dtn_A 162 KTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYY 216 (234)
T ss_dssp HHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEET
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeec
Confidence 124566688999998776654433
No 52
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.73 E-value=1.5e-16 Score=132.68 Aligned_cols=144 Identities=15% Similarity=0.100 Sum_probs=110.8
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEE
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLIN 101 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~ 101 (256)
.......++..+.. ..++.+|||+|||+|.++..++.. ++++|+|+|+++.+++.|++++...++. .++++
T Consensus 30 ~~~~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 102 (267)
T 3kkz_A 30 SPEVTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGH-----VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIV 102 (267)
T ss_dssp CHHHHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTT-----CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CHHHHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhc-----cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEE
Confidence 45556666666542 257899999999999988776664 5679999999999999999999988875 48999
Q ss_pred cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----
Q 025211 102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----- 176 (256)
Q Consensus 102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----- 176 (256)
+|+.+.. +.+++||+|+++.++.+. + ...+++.+.++|||||++++..+..
T Consensus 103 ~d~~~~~--~~~~~fD~i~~~~~~~~~-~---------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 158 (267)
T 3kkz_A 103 GSMDDLP--FRNEELDLIWSEGAIYNI-G---------------------FERGLNEWRKYLKKGGYLAVSECSWFTDER 158 (267)
T ss_dssp CCTTSCC--CCTTCEEEEEESSCGGGT-C---------------------HHHHHHHHGGGEEEEEEEEEEEEEESSSCC
T ss_pred cChhhCC--CCCCCEEEEEEcCCceec-C---------------------HHHHHHHHHHHcCCCCEEEEEEeeecCCCC
Confidence 9997753 335789999998776543 1 4688999999999999999976531
Q ss_pred ---------------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 ---------------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 ---------------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
....++.+.+.+.||..+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 159 PAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp CHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred hHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 1234667778888888765543
No 53
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.73 E-value=4.9e-17 Score=134.55 Aligned_cols=133 Identities=22% Similarity=0.270 Sum_probs=96.7
Q ss_pred HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc---CCc------
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH---NVH------ 96 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~---~~~------ 96 (256)
.+++.+++.+. ..++.+|||+|||+|.+++.++..+. .++.+|+|+|+|+.+++.|++++..+ ++.
T Consensus 38 ~l~~~~l~~~~---~~~~~~vLD~gcGsG~~~~~la~~~~--~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1o9g_A 38 EIFQRALARLP---GDGPVTLWDPCCGSGYLLTVLGLLHR--RSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELER 112 (250)
T ss_dssp HHHHHHHHTSS---CCSCEEEEETTCTTSHHHHHHHHHTG--GGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHhcc---cCCCCeEEECCCCCCHHHHHHHHHhc--cCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhh
Confidence 45555555432 23678999999999999988887631 23568999999999999999988765 431
Q ss_pred ---------------------ce-------------EEEcchhhchhh--h-cCCCccEEEECCCCCCCCCcccccccch
Q 025211 97 ---------------------AD-------------LINTDIASGLEK--R-LAGLVDVMVVNPPYVPTPEDEVGREGIA 139 (256)
Q Consensus 97 ---------------------~~-------------~~~~d~~~~~~~--~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~ 139 (256)
.+ ++++|+.+.... . ...+||+|++||||........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~------ 186 (250)
T 1o9g_A 113 REQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG------ 186 (250)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS------
T ss_pred hhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc------
Confidence 23 899998875421 0 2348999999999975443210
Q ss_pred hhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 140 SAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
..+......+++.+.++|+|||+++++...
T Consensus 187 ------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 187 ------QVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp ------CCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred ------cccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 123456789999999999999999995443
No 54
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.72 E-value=8.4e-17 Score=130.12 Aligned_cols=124 Identities=11% Similarity=0.077 Sum_probs=94.6
Q ss_pred CchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-----
Q 025211 22 DDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH----- 96 (256)
Q Consensus 22 ~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~----- 96 (256)
+......+.+.+.+.. .++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|++++..+++.
T Consensus 12 ~~~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~ 84 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQ---SNARRVIDLGCGQGNLLKILLKD----SFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWE 84 (217)
T ss_dssp CHHHHHHHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHHC----TTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHT
T ss_pred CHHHHHHHHHHHHHHh---cCCCEEEEeCCCCCHHHHHHHhh----CCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCc
Confidence 3355556666666542 46789999999999998877775 56679999999999999999998877653
Q ss_pred -ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 97 -ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 97 -~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+++++|+... +...++||+|+++..+.+.+.+ ....+++.+.++|||||+++++.
T Consensus 85 ~v~~~~~d~~~~--~~~~~~fD~v~~~~~l~~~~~~-------------------~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 85 RLQLIQGALTYQ--DKRFHGYDAATVIEVIEHLDLS-------------------RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp TEEEEECCTTSC--CGGGCSCSEEEEESCGGGCCHH-------------------HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ceEEEeCCcccc--cccCCCcCEEeeHHHHHcCCHH-------------------HHHHHHHHHHHHcCCCEEEEEcc
Confidence 48899998543 2234789999997665544321 25788999999999999777643
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.72 E-value=4e-17 Score=143.40 Aligned_cols=132 Identities=17% Similarity=0.222 Sum_probs=104.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-----C----CcceEEEcchhhchh--
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-----N----VHADLINTDIASGLE-- 109 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-----~----~~~~~~~~d~~~~~~-- 109 (256)
.++.+|||+|||+|.++..+++.+ .++++|+|+|+++.+++.|++++..+ | ...+++.+|+.+...
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLV---GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHH---TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCCEEEEecCccCHHHHHHHHHh---CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 478999999999999998888874 25679999999999999999998765 4 234899999887521
Q ss_pred --hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----------
Q 025211 110 --KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------- 177 (256)
Q Consensus 110 --~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------- 177 (256)
++.+++||+|+++..+.+.++ ...+++++.++|||||++++......
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d---------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 217 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTN---------------------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQD 217 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHC
T ss_pred cCCCCCCCEEEEEEccchhcCCC---------------------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhh
Confidence 334579999999877654433 46889999999999999999754321
Q ss_pred ------------CHHHHHHHHHHcCCcEEEE
Q 025211 178 ------------DPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 178 ------------~~~~~~~~~~~~g~~~~~~ 196 (256)
...++.+.+.+.||....+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 248 (383)
T 4fsd_A 218 PILYGECLGGALYLEDFRRLVAEAGFRDVRL 248 (383)
T ss_dssp HHHHHTTCTTCCBHHHHHHHHHHTTCCCEEE
T ss_pred HHHhhcccccCCCHHHHHHHHHHCCCceEEE
Confidence 2367889999999976543
No 56
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.72 E-value=2.6e-16 Score=131.70 Aligned_cols=146 Identities=12% Similarity=0.140 Sum_probs=110.2
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+++....|.|+..++. ..+.+.+ +++.+|||+|||+|.+++.+++. ..+.|+++|+||.+++.+++|+
T Consensus 101 ~D~~k~~f~~~~~~er--~ri~~~~-----~~g~~VlD~~aG~G~~~i~~a~~-----g~~~V~avD~np~a~~~~~~N~ 168 (278)
T 3k6r_A 101 LDVAKIMFSPANVKER--VRMAKVA-----KPDELVVDMFAGIGHLSLPIAVY-----GKAKVIAIEKDPYTFKFLVENI 168 (278)
T ss_dssp EETTTSCCCGGGHHHH--HHHHHHC-----CTTCEEEETTCTTTTTTHHHHHH-----TCCEEEEECCCHHHHHHHHHHH
T ss_pred EeccceEEcCCcHHHH--HHHHHhc-----CCCCEEEEecCcCcHHHHHHHHh-----cCCeEEEEECCHHHHHHHHHHH
Confidence 5566667777665444 3455543 57999999999999999998876 2358999999999999999999
Q ss_pred HHcCCcc--eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeE
Q 025211 91 EAHNVHA--DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGW 168 (256)
Q Consensus 91 ~~~~~~~--~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 168 (256)
..|++.. .++++|..+... .+.||.|++|||+. ...++..+.++||+||+
T Consensus 169 ~~N~v~~~v~~~~~D~~~~~~---~~~~D~Vi~~~p~~-------------------------~~~~l~~a~~~lk~gG~ 220 (278)
T 3k6r_A 169 HLNKVEDRMSAYNMDNRDFPG---ENIADRILMGYVVR-------------------------THEFIPKALSIAKDGAI 220 (278)
T ss_dssp HHTTCTTTEEEECSCTTTCCC---CSCEEEEEECCCSS-------------------------GGGGHHHHHHHEEEEEE
T ss_pred HHcCCCCcEEEEeCcHHHhcc---ccCCCEEEECCCCc-------------------------HHHHHHHHHHHcCCCCE
Confidence 9999875 889999988753 36899999999864 23456677789999999
Q ss_pred EEEEEeC------CCCHHHHHHHHHHcCCcEEEE
Q 025211 169 LYLVTLT------ANDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 169 l~~~~~~------~~~~~~~~~~~~~~g~~~~~~ 196 (256)
+.+.... ....+.+.+.+...|+....+
T Consensus 221 ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 221 IHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp EEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeeecccccchhHHHHHHHHHHHcCCcEEEE
Confidence 8763321 122345677777888876443
No 57
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.72 E-value=1.6e-16 Score=133.27 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=89.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.+++.+++. .+.++|+|+|+++.+++.|++|+..+++.+ .++++|+.+. +. .++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~----~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKY----SKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHH----TCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHh----CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--cCCceEE
Confidence 47789999999999999999887 456699999999999999999999999865 8999999887 32 5689999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
+++||+. ...++..+.+.|+|||++++.+...
T Consensus 191 i~d~p~~-------------------------~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 191 IMGYVHK-------------------------THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EECCCSS-------------------------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCccc-------------------------HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 9999961 3466888889999999999876543
No 58
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.72 E-value=3.1e-16 Score=128.41 Aligned_cols=143 Identities=14% Similarity=0.118 Sum_probs=111.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++.+++. ++...|+|+|+++.+++.|++|+..+++.. ++..+|..+...+ ..+||+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~----~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--~~~~D~ 93 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKN----QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--KDAIDT 93 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHT----TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc--cccccE
Confidence 46789999999999999998886 566689999999999999999999999864 8999999887543 135999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
|++. |. |-.....++....+.|+++|++++. + ......+++++.+.||.......
T Consensus 94 Ivia----------------------gm-Gg~lI~~IL~~~~~~L~~~~~lIlq-~-~~~~~~lr~~L~~~Gf~i~~E~l 148 (244)
T 3gnl_A 94 IVIA----------------------GM-GGTLIRTILEEGAAKLAGVTKLILQ-P-NIAAWQLREWSEQNNWLITSEAI 148 (244)
T ss_dssp EEEE----------------------EE-CHHHHHHHHHHTGGGGTTCCEEEEE-E-SSCHHHHHHHHHHHTEEEEEEEE
T ss_pred EEEe----------------------CC-chHHHHHHHHHHHHHhCCCCEEEEE-c-CCChHHHHHHHHHCCCEEEEEEE
Confidence 8751 01 2356789999999999999999984 4 44688999999999998755444
Q ss_pred cCCCCccEEEEEEEec
Q 025211 199 RSTEEENLHIIKFWRD 214 (256)
Q Consensus 199 ~~~~~~~~~l~~~~~~ 214 (256)
.......+.++...++
T Consensus 149 v~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 149 LREDNKVYEIMVLAPS 164 (244)
T ss_dssp EEETTEEEEEEEEEEC
T ss_pred EEECCEEEEEEEEEeC
Confidence 4344444555565554
No 59
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.71 E-value=1.9e-16 Score=130.05 Aligned_cols=140 Identities=11% Similarity=0.157 Sum_probs=106.9
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
...+.+.+...+..+ .++.+|||+|||+|.++..++.. +++|+|+|+++.+++.++++ .+++.+|
T Consensus 25 ~~~~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~-------~~~~~~d 89 (240)
T 3dli_A 25 RELVKARLRRYIPYF--KGCRRVLDIGCGRGEFLELCKEE------GIESIGVDINEDMIKFCEGK-------FNVVKSD 89 (240)
T ss_dssp HHHHHHHHGGGGGGT--TTCSCEEEETCTTTHHHHHHHHH------TCCEEEECSCHHHHHHHHTT-------SEEECSC
T ss_pred HHHHHHHHHHHHhhh--cCCCeEEEEeCCCCHHHHHHHhC------CCcEEEEECCHHHHHHHHhh-------cceeecc
Confidence 455556665555433 46799999999999998877765 45799999999999998876 4788899
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------ 177 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------ 177 (256)
+.+...++.+++||+|+++-.+.+.+.+. +..+++++.++|||||++++..+...
T Consensus 90 ~~~~~~~~~~~~fD~i~~~~~l~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 150 (240)
T 3dli_A 90 AIEYLKSLPDKYLDGVMISHFVEHLDPER-------------------LFELLSLCYSKMKYSSYIVIESPNPTSLYSLI 150 (240)
T ss_dssp HHHHHHTSCTTCBSEEEEESCGGGSCGGG-------------------HHHHHHHHHHHBCTTCCEEEEEECTTSHHHHH
T ss_pred HHHHhhhcCCCCeeEEEECCchhhCCcHH-------------------HHHHHHHHHHHcCCCcEEEEEeCCcchhHHHH
Confidence 88875555568999999976655443221 57899999999999999999876543
Q ss_pred ------------CHHHHHHHHHHcCCcEEEEE
Q 025211 178 ------------DPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 178 ------------~~~~~~~~~~~~g~~~~~~~ 197 (256)
...++...+.+.||....+.
T Consensus 151 ~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 151 NFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp HHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 23577888888898865443
No 60
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.71 E-value=8.6e-17 Score=133.22 Aligned_cols=127 Identities=17% Similarity=0.233 Sum_probs=105.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..++..+ +|+.+++++|+++.+++.|++++..+++.. +++.+|+.+.. .+++||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~---~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIV---GPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI---EEENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH---CTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC---CCCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHh---CCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc---CCCCcCE
Confidence 578999999999999998888765 356799999999999999999999988764 89999998653 3468999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcC--CcEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKG--YAARIV 196 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g--~~~~~~ 196 (256)
|++++|. ...+++.+.++|+|||++++..+......++.+.+.+.| |....+
T Consensus 166 v~~~~~~--------------------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 166 VILDLPQ--------------------------PERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EEECSSC--------------------------GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEE
T ss_pred EEECCCC--------------------------HHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEE
Confidence 9998873 245689999999999999998776666778888999998 876555
Q ss_pred Eec
Q 025211 197 VQR 199 (256)
Q Consensus 197 ~~~ 199 (256)
...
T Consensus 220 ~e~ 222 (255)
T 3mb5_A 220 INV 222 (255)
T ss_dssp ECC
T ss_pred EEE
Confidence 543
No 61
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.71 E-value=2.8e-16 Score=126.06 Aligned_cols=142 Identities=16% Similarity=0.157 Sum_probs=100.0
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+...+......++.+|||+|||+|.+++.++.. +. ..++|+|+++.+++.+++++..+++..+++++|+
T Consensus 32 ~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~----~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~ 106 (207)
T 1wy7_A 32 GNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL----GA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDV 106 (207)
T ss_dssp HHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT----TC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCG
T ss_pred hHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc----CC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECch
Confidence 334444443332222346889999999999998887765 22 3799999999999999999988887669999998
Q ss_pred hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHH
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICL 184 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 184 (256)
.+. +.+||+|++||||+...... ...+++.+.+++ ||.+++........+.+.+
T Consensus 107 ~~~-----~~~~D~v~~~~p~~~~~~~~-------------------~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~ 160 (207)
T 1wy7_A 107 SEF-----NSRVDIVIMNPPFGSQRKHA-------------------DRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEK 160 (207)
T ss_dssp GGC-----CCCCSEEEECCCCSSSSTTT-------------------THHHHHHHHHHC--SEEEEEEECCHHHHHHHHH
T ss_pred HHc-----CCCCCEEEEcCCCccccCCc-------------------hHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHH
Confidence 874 24899999999997654311 245677777777 5544432223334556777
Q ss_pred HHHHcCCcEEEEE
Q 025211 185 QMMEKGYAARIVV 197 (256)
Q Consensus 185 ~~~~~g~~~~~~~ 197 (256)
.+.+.||....+.
T Consensus 161 ~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 161 FSWEHGFVVTHRL 173 (207)
T ss_dssp HHHHTTEEEEEEE
T ss_pred HHHHCCCeEEEEE
Confidence 8888898765543
No 62
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.71 E-value=6.5e-16 Score=124.27 Aligned_cols=124 Identities=18% Similarity=0.212 Sum_probs=100.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++. ...+..+|+.+.. .+++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~---~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA------GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD---AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC---CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc------CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC---CCCcEEEEE
Confidence 36789999999999998877764 458999999999999999886 3477888887764 468999999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC--------------CHHHHHHHH
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------DPSQICLQM 186 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------~~~~~~~~~ 186 (256)
++..+.+.+. .....+++.+.++|||||++++..+... ..+++.+.+
T Consensus 108 ~~~~l~~~~~-------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (211)
T 3e23_A 108 AHACLLHVPR-------------------DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARY 168 (211)
T ss_dssp ECSCGGGSCH-------------------HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHH
T ss_pred ecCchhhcCH-------------------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHH
Confidence 9876654432 1267899999999999999999765432 567899999
Q ss_pred HHcC-CcEEEEE
Q 025211 187 MEKG-YAARIVV 197 (256)
Q Consensus 187 ~~~g-~~~~~~~ 197 (256)
++.| |+...+.
T Consensus 169 ~~aG~f~~~~~~ 180 (211)
T 3e23_A 169 AEAGTWASVAVE 180 (211)
T ss_dssp HHHCCCSEEEEE
T ss_pred HhCCCcEEEEEE
Confidence 9999 9976655
No 63
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.71 E-value=1.5e-16 Score=128.19 Aligned_cols=144 Identities=14% Similarity=0.171 Sum_probs=110.0
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEE
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLIN 101 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~ 101 (256)
...+++.+++.+. .++.+|||+|||+|.++..+++. ++.+++|+|+++.+++.|++++...++. .++++
T Consensus 29 ~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~-----~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~ 99 (219)
T 3dlc_A 29 YPIIAENIINRFG----ITAGTCIDIGSGPGALSIALAKQ-----SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQ 99 (219)
T ss_dssp HHHHHHHHHHHHC----CCEEEEEEETCTTSHHHHHHHHH-----SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cHHHHHHHHHhcC----CCCCEEEEECCCCCHHHHHHHHc-----CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEE
Confidence 3445566666553 23349999999999998887775 4579999999999999999999988875 38999
Q ss_pred cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----
Q 025211 102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---- 177 (256)
Q Consensus 102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---- 177 (256)
+|+.+.. +.+++||+|+++..+++..+ ...+++.+.++|+|||++++......
T Consensus 100 ~d~~~~~--~~~~~~D~v~~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 156 (219)
T 3dlc_A 100 GDVHNIP--IEDNYADLIVSRGSVFFWED---------------------VATAFREIYRILKSGGKTYIGGGFGNKELR 156 (219)
T ss_dssp CBTTBCS--SCTTCEEEEEEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEECCSSHHHH
T ss_pred cCHHHCC--CCcccccEEEECchHhhccC---------------------HHHHHHHHHHhCCCCCEEEEEeccCcHHHH
Confidence 9997752 34578999999877654422 56889999999999999999642211
Q ss_pred -------------------------CHHHHHHHHHHcCCcEEEEEec
Q 025211 178 -------------------------DPSQICLQMMEKGYAARIVVQR 199 (256)
Q Consensus 178 -------------------------~~~~~~~~~~~~g~~~~~~~~~ 199 (256)
..+++.+.+++.||+...+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 203 (219)
T 3dlc_A 157 DSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIILG 203 (219)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEE
T ss_pred HHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEec
Confidence 1256788889999987766644
No 64
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.71 E-value=7.2e-16 Score=131.91 Aligned_cols=145 Identities=14% Similarity=0.115 Sum_probs=103.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|..++.++..+. +++.|+|+|+++.+++.+++|+..+++.+ .++++|+.+... ..++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~---~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~--~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMR---NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE--LNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTT---TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG--GCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC---CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc--ccccCCEE
Confidence 5789999999999999999888742 34699999999999999999999998855 899999887643 35689999
Q ss_pred EECCCCCCCCCcccccccchhhhcCC----CCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---CHHHHHHHHHHcCCc
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGG----ENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---DPSQICLQMMEKGYA 192 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~~~~g~~ 192 (256)
++|+|+.....-. +.+...+.-. .........++..+.++|||||++++++++.. ....+...+++.+|+
T Consensus 192 l~d~Pcsg~g~~~---~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 192 LLDAPCTGSGTIH---KNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp EEECCTTSTTTCC-----------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred EEeCCCCCccccc---CChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 9999975432110 0111111000 00112346889999999999999999887653 233456667777765
Q ss_pred E
Q 025211 193 A 193 (256)
Q Consensus 193 ~ 193 (256)
.
T Consensus 269 ~ 269 (315)
T 1ixk_A 269 L 269 (315)
T ss_dssp E
T ss_pred E
Confidence 4
No 65
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.71 E-value=8.7e-16 Score=136.92 Aligned_cols=188 Identities=18% Similarity=0.128 Sum_probs=129.3
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
+.|.....+..++..++.. .++.+|||+|||+|..++.++..+. ..+.|+|+|+++.+++.+++|+.++++
T Consensus 85 G~~~vQd~ss~l~~~~L~~------~~g~~VLDlcaGpGgkt~~lA~~~~---~~g~V~AvDis~~rl~~~~~n~~r~g~ 155 (456)
T 3m4x_A 85 GYEYSQEPSAMIVGTAAAA------KPGEKVLDLCAAPGGKSTQLAAQMK---GKGLLVTNEIFPKRAKILSENIERWGV 155 (456)
T ss_dssp TSCEECCTTTHHHHHHHCC------CTTCEEEESSCTTCHHHHHHHHHHT---TCSEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CcEEEECHHHHHHHHHcCC------CCCCEEEEECCCcCHHHHHHHHHcC---CCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 3444455544544444432 5789999999999999999998753 246999999999999999999999998
Q ss_pred cc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcH----HHHHHHHHHHhhccccCeEEE
Q 025211 96 HA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGR----AVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 96 ~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~ 170 (256)
.+ .++++|..+.... .+++||+|++|||+.... ...+.+...+.-..... .....++..+.++|||||+++
T Consensus 156 ~nv~v~~~Da~~l~~~-~~~~FD~Il~DaPCSg~G---~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lv 231 (456)
T 3m4x_A 156 SNAIVTNHAPAELVPH-FSGFFDRIVVDAPCSGEG---MFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLI 231 (456)
T ss_dssp SSEEEECCCHHHHHHH-HTTCEEEEEEECCCCCGG---GTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CceEEEeCCHHHhhhh-ccccCCEEEECCCCCCcc---ccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 75 8888998776432 357899999999975322 12223333332222211 234588999999999999999
Q ss_pred EEEeCCC---CHHHHHHHHHHcCCcEE-------------------------EEEecCCCCccEEEEEEEecCc
Q 025211 171 LVTLTAN---DPSQICLQMMEKGYAAR-------------------------IVVQRSTEEENLHIIKFWRDFD 216 (256)
Q Consensus 171 ~~~~~~~---~~~~~~~~~~~~g~~~~-------------------------~~~~~~~~~~~~~l~~~~~~~~ 216 (256)
+++++.. ....+...+.+++|+.. .+++.....+.+++-..+|...
T Consensus 232 YsTCs~~~eEne~vv~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~k~~~ 305 (456)
T 3m4x_A 232 YSTCTFAPEENEEIISWLVENYPVTIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHKDQGEGHFVAKLTFHGQ 305 (456)
T ss_dssp EEESCCCGGGTHHHHHHHHHHSSEEEECCCCSSCCEECCGGGSSSTTGGGSEEECTTTSSSSCEEEEEEEECSC
T ss_pred EEEeecccccCHHHHHHHHHhCCCEEEeccccccccccccccccccccCCeEEECCCCCCCcCeEEEEEEECCC
Confidence 9888664 33456666666664432 2333344556777777777554
No 66
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=3.3e-16 Score=131.10 Aligned_cols=130 Identities=22% Similarity=0.221 Sum_probs=104.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..++.. +|+.+++|+|+++.+++.+++++..+++.. .++.+|+.+.. +.+++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKN----NPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--FEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHH----CTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--SCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC--CCCCCeeEE
Confidence 47899999999999998888877 678899999999999999999999888755 89999998753 345899999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------- 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------- 176 (256)
+++..+.+.++ ...++..+.++|||||++++..+..
T Consensus 110 ~~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (276)
T 3mgg_A 110 FVCFVLEHLQS---------------------PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQ 168 (276)
T ss_dssp EEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EEechhhhcCC---------------------HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHH
Confidence 99876654433 4588999999999999999976422
Q ss_pred -------CCHHHHHHHHHHcCCcEEEEE
Q 025211 177 -------NDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 177 -------~~~~~~~~~~~~~g~~~~~~~ 197 (256)
....++..++++.||..+.+.
T Consensus 169 ~~~~~~~~~~~~l~~~l~~aGf~~v~~~ 196 (276)
T 3mgg_A 169 AYMKGNSLVGRQIYPLLQESGFEKIRVE 196 (276)
T ss_dssp HHTTCCTTGGGGHHHHHHHTTCEEEEEE
T ss_pred HhcCCCcchHHHHHHHHHHCCCCeEEEe
Confidence 112456778888899876554
No 67
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.70 E-value=2.4e-15 Score=121.30 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=95.7
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+...++..+. +...++.+|||+|||+|.++..++..+ ++..|+|+|+|+.+++.+.+..... .+..++.+|+
T Consensus 41 ~~l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~----~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~ 114 (210)
T 1nt2_A 41 SKLAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIV----DEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDA 114 (210)
T ss_dssp CHHHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHT----TTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCT
T ss_pred HHHHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHc----CCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCC
Confidence 344455555443 333578899999999999988888873 3468999999999987776655433 2336777887
Q ss_pred hhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC-----CCC
Q 025211 105 ASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT-----AND 178 (256)
Q Consensus 105 ~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-----~~~ 178 (256)
.+... ....++||+|+++.+.. .....++.++.++|||||+++++... ...
T Consensus 115 ~~~~~~~~~~~~fD~V~~~~~~~-----------------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~ 171 (210)
T 1nt2_A 115 SKPWKYSGIVEKVDLIYQDIAQK-----------------------NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAE 171 (210)
T ss_dssp TCGGGTTTTCCCEEEEEECCCST-----------------------THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSC
T ss_pred CCchhhcccccceeEEEEeccCh-----------------------hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCC
Confidence 66421 11237899999984210 01345689999999999999997532 112
Q ss_pred HHHHH----HHHHHcCCcEEEEEec
Q 025211 179 PSQIC----LQMMEKGYAARIVVQR 199 (256)
Q Consensus 179 ~~~~~----~~~~~~g~~~~~~~~~ 199 (256)
.+++. +.+.+. |+.......
T Consensus 172 ~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 172 PEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp HHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred HHHHHHHHHHHHHhh-cEEeeeecC
Confidence 33332 236666 876665443
No 68
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.70 E-value=1.3e-16 Score=131.17 Aligned_cols=133 Identities=12% Similarity=0.076 Sum_probs=101.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhchhhhcCCCccEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
++.+|||+|||+|.++..++.. . ...++|+|+++.+++.|++++...+. ...++.+|+.+.. ..+++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLP----L-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--PEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTT----T-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC--CCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh----c-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC--CCCCCEEEEE
Confidence 5899999999999987655543 3 45899999999999999998876542 2388999987653 2346899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC--------------CHHHHHHHH
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------DPSQICLQM 186 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------~~~~~~~~~ 186 (256)
++..+.+.+++ ....++..+.++|+|||++++..+... ...++.+.+
T Consensus 152 ~~~~l~~~~~~-------------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (241)
T 2ex4_A 152 IQWVIGHLTDQ-------------------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRII 212 (241)
T ss_dssp EESCGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHH
T ss_pred EcchhhhCCHH-------------------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHH
Confidence 97655433221 146889999999999999999664221 467899999
Q ss_pred HHcCCcEEEEEecC
Q 025211 187 MEKGYAARIVVQRS 200 (256)
Q Consensus 187 ~~~g~~~~~~~~~~ 200 (256)
.+.||.........
T Consensus 213 ~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 213 CSAGLSLLAEERQE 226 (241)
T ss_dssp HHTTCCEEEEEECC
T ss_pred HHcCCeEEEeeecC
Confidence 99999987766543
No 69
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.70 E-value=1.6e-16 Score=130.38 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=101.0
Q ss_pred HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211 27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS 106 (256)
Q Consensus 27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~ 106 (256)
..+.+.+.+... .++.+|||+|||+|.++..++.. + .+|+|+|+++.+++.|+++... ..+++++|+.+
T Consensus 29 ~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~----~--~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~ 97 (250)
T 2p7i_A 29 MHPFMVRAFTPF--FRPGNLLELGSFKGDFTSRLQEH----F--NDITCVEASEEAISHAQGRLKD---GITYIHSRFED 97 (250)
T ss_dssp HHHHHHHHHGGG--CCSSCEEEESCTTSHHHHHHTTT----C--SCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGG
T ss_pred HHHHHHHHHHhh--cCCCcEEEECCCCCHHHHHHHHh----C--CcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHH
Confidence 344555555432 36789999999999987666553 3 3799999999999999987543 45899999887
Q ss_pred chhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh-hccccCeEEEEEEeCCC--------
Q 025211 107 GLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD-KLLSKRGWLYLVTLTAN-------- 177 (256)
Q Consensus 107 ~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~-------- 177 (256)
.. .+++||+|++.-.+.+.++ ...+++++. ++|||||++++..+...
T Consensus 98 ~~---~~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 153 (250)
T 2p7i_A 98 AQ---LPRRYDNIVLTHVLEHIDD---------------------PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAV 153 (250)
T ss_dssp CC---CSSCEEEEEEESCGGGCSS---------------------HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHH
T ss_pred cC---cCCcccEEEEhhHHHhhcC---------------------HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHH
Confidence 62 3578999999765543322 468899999 99999999999876432
Q ss_pred ------------------------CHHHHHHHHHHcCCcEEEEE
Q 025211 178 ------------------------DPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 178 ------------------------~~~~~~~~~~~~g~~~~~~~ 197 (256)
...++.+.+++.||+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 154 KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 34577788888888876554
No 70
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.70 E-value=3.1e-16 Score=130.19 Aligned_cols=128 Identities=19% Similarity=0.215 Sum_probs=98.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..++.. . .+|+|+|+++.+++.|++++...++.. .++.+|+.+. ++.+++||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~----~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l--~~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPF----V--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM--PFTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGG----S--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC--CSCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh----C--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC--CCCCCCEEEE
Confidence 47899999999999987766654 3 389999999999999999998887654 8999998775 3445799999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------- 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------- 176 (256)
+++..+.+.++ ...++.++.++|||||+++++....
T Consensus 108 ~~~~~l~~~~d---------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (260)
T 1vl5_A 108 TCRIAAHHFPN---------------------PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHR 166 (260)
T ss_dssp EEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCC
T ss_pred EEhhhhHhcCC---------------------HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccC
Confidence 99866544332 4688999999999999999965322
Q ss_pred -CCHHHHHHHHHHcCCcEEEEE
Q 025211 177 -NDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 177 -~~~~~~~~~~~~~g~~~~~~~ 197 (256)
....++.+++.+.||....+.
T Consensus 167 ~~~~~~~~~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 167 AWKKSDWLKMLEEAGFELEELH 188 (260)
T ss_dssp CCBHHHHHHHHHHHTCEEEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEE
Confidence 123466777888888765443
No 71
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=3.6e-16 Score=126.83 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=85.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++.+|||+|||+|.++..++.. ++ +++|+|+++.+++.|+++...++...+++++|+.+.. ..+++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~----~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDY----GF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS--FEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT----TC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC--SCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHc----CC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC--CCCCcEEEEEE
Confidence 4789999999999998777765 33 8999999999999999999887755599999987752 33578999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
++++.... ......+++.+.++|+|||++++..+.
T Consensus 110 ~~~~~~~~-------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIVHFE-------------------PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGGGCC-------------------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchHhCC-------------------HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 98822111 112568899999999999999997653
No 72
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=7.7e-16 Score=129.59 Aligned_cols=129 Identities=21% Similarity=0.282 Sum_probs=102.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
++.+|||+|||+|.++..++.. +++|+|+|+++.+++.|++++...++. .+++++|+.+.. .+.+++||+|
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~v 140 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA-SHLETPVDLI 140 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG-GGCSSCEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh-hhcCCCceEE
Confidence 4789999999999998877765 569999999999999999999888874 389999998764 2346899999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------- 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------- 176 (256)
+++..+.+.++ ...+++.+.++|||||++++..+..
T Consensus 141 ~~~~~l~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (285)
T 4htf_A 141 LFHAVLEWVAD---------------------PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKK 199 (285)
T ss_dssp EEESCGGGCSC---------------------HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC
T ss_pred EECchhhcccC---------------------HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcccc
Confidence 99876654432 4688999999999999999976421
Q ss_pred ----------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 ----------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 ----------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
-...++.+++++.||+.+.+..
T Consensus 200 ~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 200 KKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp ----CCCSCCBCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCCCCCCCHHHHHHHHHHCCCceeeeee
Confidence 1346788888889998765543
No 73
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.70 E-value=2.9e-16 Score=133.59 Aligned_cols=137 Identities=20% Similarity=0.217 Sum_probs=108.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++.++. ...++++|+|+|+++.+++.|++++...++. .+++++|+.+.. + +++||+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~---~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-~~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDY---SACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD--T-REGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCC---TTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC--C-CSCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHH---hcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC--c-cCCeEE
Confidence 5789999999999998655531 2267889999999999999999999888876 389999998863 2 378999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC----------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA---------------------- 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------------- 176 (256)
|+++.++++.++.+ ....+++.+.++|||||++++.....
T Consensus 191 v~~~~~~~~~~~~~------------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~ 252 (305)
T 3ocj_A 191 LTSNGLNIYEPDDA------------------RVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQL 252 (305)
T ss_dssp EECCSSGGGCCCHH------------------HHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHH
T ss_pred EEECChhhhcCCHH------------------HHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhh
Confidence 99998877654431 24568999999999999999866221
Q ss_pred ----------------CCHHHHHHHHHHcCCcEEEEEecCC
Q 025211 177 ----------------NDPSQICLQMMEKGYAARIVVQRST 201 (256)
Q Consensus 177 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~ 201 (256)
...+++.+.+++.||..+.+.....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 293 (305)
T 3ocj_A 253 QQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRA 293 (305)
T ss_dssp HHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTT
T ss_pred hhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcccC
Confidence 2467889999999999877775433
No 74
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.70 E-value=8.1e-16 Score=127.12 Aligned_cols=129 Identities=11% Similarity=0.146 Sum_probs=101.1
Q ss_pred cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEE
Q 025211 40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
..++.+|||+|||+|.++..++.. ++. +++|+|+++.+++.|+++.. .....++.+|+.+. ++.+++||+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~----~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~--~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEH----GAK-KVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDI--AIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT----TCS-EEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGC--CCCTTCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHc----CCC-EEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhC--CCCCCCeEEE
Confidence 347899999999999998877775 333 89999999999999998764 22348999998765 3345899999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------- 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------- 176 (256)
+++..+.+..+ ...+++.+.++|||||++++..+..
T Consensus 113 ~~~~~l~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (253)
T 3g5l_A 113 LSSLALHYIAS---------------------FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPV 171 (253)
T ss_dssp EEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEE
T ss_pred EEchhhhhhhh---------------------HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEe
Confidence 99766544322 5788999999999999999964321
Q ss_pred ----------------------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 ----------------------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 ----------------------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...+++.+.+.+.||+.+.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e 215 (253)
T 3g5l_A 172 DRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIE 215 (253)
T ss_dssp CCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEEC
T ss_pred ccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeec
Confidence 0567899999999999877663
No 75
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.70 E-value=9.7e-16 Score=127.97 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=108.5
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINT 102 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~ 102 (256)
..+.+.+++.+. ..++.+|||+|||+|.++..+++. . +++|+|+|+++.+++.+++++...++. ..++.+
T Consensus 47 ~~~~~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~----~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 118 (273)
T 3bus_A 47 DRLTDEMIALLD---VRSGDRVLDVGCGIGKPAVRLATA----R-DVRVTGISISRPQVNQANARATAAGLANRVTFSYA 118 (273)
T ss_dssp HHHHHHHHHHSC---CCTTCEEEEESCTTSHHHHHHHHH----S-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEeCCCCCHHHHHHHHh----c-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC
Confidence 344455555443 357899999999999998888775 3 569999999999999999999888875 489999
Q ss_pred chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----
Q 025211 103 DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----- 177 (256)
Q Consensus 103 d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----- 177 (256)
|+.+. ++.+++||+|+++..+.+.++ ...++..+.++|||||++++......
T Consensus 119 d~~~~--~~~~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 175 (273)
T 3bus_A 119 DAMDL--PFEDASFDAVWALESLHHMPD---------------------RGRALREMARVLRPGGTVAIADFVLLAPVEG 175 (273)
T ss_dssp CTTSC--CSCTTCEEEEEEESCTTTSSC---------------------HHHHHHHHHTTEEEEEEEEEEEEEESSCCCH
T ss_pred ccccC--CCCCCCccEEEEechhhhCCC---------------------HHHHHHHHHHHcCCCeEEEEEEeeccCCCCh
Confidence 98775 334578999999877765543 46889999999999999998764211
Q ss_pred -------------------CHHHHHHHHHHcCCcEEEEEe
Q 025211 178 -------------------DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 178 -------------------~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...++.+.+++.||....+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 176 AKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVD 215 (273)
T ss_dssp HHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEE
Confidence 234566777778887655443
No 76
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.70 E-value=6.8e-16 Score=136.09 Aligned_cols=140 Identities=18% Similarity=0.203 Sum_probs=105.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-c--ceEEEcchhhchhhhc--CCCc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-H--ADLINTDIASGLEKRL--AGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~--~~~~~~d~~~~~~~~~--~~~f 116 (256)
++.+|||+|||+|.+++.++.. + ...|+|+|+++.+++.|++|+..+++ . .+++++|+.+...... ..+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~----g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMG----G-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHT----T-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeeccCCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCC
Confidence 6789999999999999988875 2 34899999999999999999999998 5 4999999988765322 4689
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH-----HHHHHHHHHcCC
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP-----SQICLQMMEKGY 191 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~~~~g~ 191 (256)
|+|++|||++..+.... .. ....+..++..+.++|+|||++++++++.... ..+.+.+.+.|+
T Consensus 295 D~Ii~dpP~~~~~~~~~---------~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQL---------MG---ACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp EEEEECCSSTTTCSSSS---------SC---CCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred CEEEECCCCCCCChhHH---------HH---HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 99999999976543211 11 11236788999999999999999987755432 223445666776
Q ss_pred cEEEEEe
Q 025211 192 AARIVVQ 198 (256)
Q Consensus 192 ~~~~~~~ 198 (256)
....+..
T Consensus 363 ~~~~i~~ 369 (396)
T 3c0k_A 363 DVQFIEQ 369 (396)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 6655543
No 77
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.70 E-value=3.5e-16 Score=137.31 Aligned_cols=138 Identities=16% Similarity=0.146 Sum_probs=104.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhc--CCCccE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRL--AGLVDV 118 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~--~~~fD~ 118 (256)
++.+|||+|||+|.+++.++.. ..+|+|+|+++.+++.|++|+..+++.+ +++++|+.+...... ..+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG------FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5689999999999999998876 2489999999999999999999999875 999999988765321 468999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHH-----HHHHHHHHcCCcE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPS-----QICLQMMEKGYAA 193 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----~~~~~~~~~g~~~ 193 (256)
|++|||++..+..... .....+..++..+.++|+|||++++++++..... .+.+.+.+.|...
T Consensus 283 Ii~dpP~~~~~~~~~~------------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVE------------RAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp EEECCCCSCCSTTSHH------------HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred EEECCCCCCCChhHHH------------HHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 9999999765442210 0123467889999999999999999877554332 2334555666555
Q ss_pred EEEE
Q 025211 194 RIVV 197 (256)
Q Consensus 194 ~~~~ 197 (256)
..+.
T Consensus 351 ~~i~ 354 (382)
T 1wxx_A 351 RVVE 354 (382)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 78
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=1.3e-15 Score=129.40 Aligned_cols=114 Identities=14% Similarity=0.167 Sum_probs=91.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++.. + ++|+|+|+++.+++.|++++...++. .+++.+|+.+. +++||+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~----~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~fD~ 140 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEY----D-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----DEPVDR 140 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH----C-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----CCCCSE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhC----C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----CCCccE
Confidence 578899999999999998888763 3 68999999999999999999988876 38999998765 479999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
|+++..+.+.++++.. .+......+++.+.++|||||++++.....
T Consensus 141 v~~~~~~~~~~d~~~~------------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 141 IVSLGAFEHFADGAGD------------AGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp EEEESCGGGTTCCSSC------------CCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred EEEcchHHhcCccccc------------cchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 9998776655443100 011236789999999999999999977543
No 79
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.69 E-value=2.1e-16 Score=132.64 Aligned_cols=125 Identities=13% Similarity=0.129 Sum_probs=101.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-CCcc-eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-NVHA-DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-~~~~-~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++.+ .++.+|+|+|+++.+++.|++++..+ +.+. +++.+|+.+.. .+++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYAL---NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI---SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH---TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC---CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC---cCCCccE
Confidence 577899999999999998888764 35679999999999999999999888 7654 89999987743 2468999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
|++++|- ...+++.+.++|||||+++++.+.......+.+.+.+.||......
T Consensus 183 Vi~~~~~--------------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 183 VIADIPD--------------------------PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp EEECCSC--------------------------GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEE
T ss_pred EEEcCcC--------------------------HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEE
Confidence 9998762 2467899999999999999988765555677777888888765544
No 80
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.69 E-value=9e-16 Score=125.53 Aligned_cols=132 Identities=12% Similarity=0.113 Sum_probs=96.9
Q ss_pred cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch-hhhcCCCccE
Q 025211 40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL-EKRLAGLVDV 118 (256)
Q Consensus 40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~fD~ 118 (256)
..++.+|||+|||+|.++..+++.+ .++.+|+|+|+++.+++.+.++...+ ....++.+|+.+.. .+...++||+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~---g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIV---GPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHH---CTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHh---CCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEE
Confidence 3578899999999999999888874 24569999999999988888887765 23488999988743 2334578999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----------CHHHHHHHHHH
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----------DPSQICLQMME 188 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~~~~~~~~~ 188 (256)
|++++|. ++ ....++..+.++|||||++++...... ...+ .+.+.+
T Consensus 151 V~~~~~~---~~--------------------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~ 206 (233)
T 2ipx_A 151 IFADVAQ---PD--------------------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQ 206 (233)
T ss_dssp EEECCCC---TT--------------------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGG
T ss_pred EEEcCCC---cc--------------------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHH
Confidence 9998871 11 134568889999999999999654310 1112 466677
Q ss_pred cCCcEEEEEec
Q 025211 189 KGYAARIVVQR 199 (256)
Q Consensus 189 ~g~~~~~~~~~ 199 (256)
.||........
T Consensus 207 ~Gf~~~~~~~~ 217 (233)
T 2ipx_A 207 ENMKPQEQLTL 217 (233)
T ss_dssp GTEEEEEEEEC
T ss_pred CCCceEEEEec
Confidence 89987664443
No 81
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.69 E-value=1.4e-15 Score=135.36 Aligned_cols=145 Identities=16% Similarity=0.119 Sum_probs=106.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|..+..++.. .+++.|+|+|+++.+++.+++|+..+++...++++|+.+....+..++||+|+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~----~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEV----APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHH----CTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHH----cCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEE
Confidence 57899999999999999999887 44579999999999999999999999887789999988764333346899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcH----HHHHHHHHHHhhccccCeEEEEEEeCCC---CHHHHHHHHHHc-CCc
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGR----AVIDKILPSADKLLSKRGWLYLVTLTAN---DPSQICLQMMEK-GYA 192 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~~~~-g~~ 192 (256)
+|||+..... ..+.+...|....... .....++..+.++|||||++++++++.. ....+...+.++ +|.
T Consensus 321 ~D~Pcsg~g~---~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~ 397 (429)
T 1sqg_A 321 LDAPCSATGV---IRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAE 397 (429)
T ss_dssp EECCCCCGGG---TTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCE
T ss_pred EeCCCCcccc---cCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCE
Confidence 9999864322 1122222222111111 1346889999999999999999887654 233455666665 454
No 82
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.69 E-value=2.3e-15 Score=134.42 Aligned_cols=188 Identities=16% Similarity=0.150 Sum_probs=126.7
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
+.|.....+..++..++. ..++.+|||+|||+|..++.++..+. ..+.|+|+|+++.+++.+++|+.++++
T Consensus 81 G~~~vQd~ss~l~a~~L~------~~~g~~VLDlgaGpG~kt~~LA~~~~---~~g~V~AvDis~~~l~~a~~n~~r~G~ 151 (464)
T 3m6w_A 81 GLYYIQEPSAQAVGVLLD------PKPGERVLDLAAAPGGKTTHLAARMG---GKGLLLANEVDGKRVRGLLENVERWGA 151 (464)
T ss_dssp TSEEECCTTTHHHHHHHC------CCTTCEEEESSCTTCHHHHHHHHHTT---TCSEEEEECSCHHHHHHHHHHHHHHCC
T ss_pred CeEEEECHHHHHHHHhcC------cCCCCEEEEEcCCcCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 334444444444444333 25789999999999999999998753 236899999999999999999999988
Q ss_pred cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcH----HHHHHHHHHHhhccccCeEEEE
Q 025211 96 HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGR----AVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 96 ~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
...++++|+.+... ...++||+|++|||+..... ..+.+...+.-..... .....++..+.++|||||++++
T Consensus 152 ~v~~~~~Da~~l~~-~~~~~FD~Il~D~PcSg~G~---~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvy 227 (464)
T 3m6w_A 152 PLAVTQAPPRALAE-AFGTYFHRVLLDAPCSGEGM---FRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVY 227 (464)
T ss_dssp CCEEECSCHHHHHH-HHCSCEEEEEEECCCCCGGG---TTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred eEEEEECCHHHhhh-hccccCCEEEECCCcCCccc---cccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 77888999877642 23578999999999853221 1112222221111111 2347889999999999999999
Q ss_pred EEeCCC---CHHHHHHHHHHc-CCcE--------------------------EEEEecCCCCccEEEEEEEecCc
Q 025211 172 VTLTAN---DPSQICLQMMEK-GYAA--------------------------RIVVQRSTEEENLHIIKFWRDFD 216 (256)
Q Consensus 172 ~~~~~~---~~~~~~~~~~~~-g~~~--------------------------~~~~~~~~~~~~~~l~~~~~~~~ 216 (256)
++++.. ....+...+.++ +|+. ..+++.....+.+++-.++|...
T Consensus 228 sTCs~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~~~ 302 (464)
T 3m6w_A 228 STCTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHRLEGEGHFLARFRKEGG 302 (464)
T ss_dssp EESCCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTTCGGGGGSEEECTTTSSSSCEEEEEEEECSC
T ss_pred EeccCchhcCHHHHHHHHHHCCCcEEEecccccccccCcccccccccccCCeEEECCCCCCceeEEEEEEEECCC
Confidence 888654 233455555555 3432 23334445567778888877654
No 83
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.69 E-value=5.2e-16 Score=130.22 Aligned_cols=143 Identities=14% Similarity=0.137 Sum_probs=98.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhh--cCCCcc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKR--LAGLVD 117 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~--~~~~fD 117 (256)
.++.+|||+|||+|..+..++..+. ....|+|+|+++.+++.+++|+..+++.. +++++|+.+..... ..++||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~---~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMK---NKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTT---TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC---CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCC
Confidence 5789999999999999998888742 12699999999999999999999998854 89999988764321 246899
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---CHHHHHHHHHHc
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---DPSQICLQMMEK 189 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~~~~ 189 (256)
+|+++||+.....-.....+..... .........++..+.++|||||++++++++.. ....+...+.+.
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~---~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDI---KYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp EEEEEECCC------------HHHH---TGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHH---HHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 9999999864322110000000000 00011257889999999999999999887653 233445555443
No 84
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.69 E-value=6e-16 Score=125.09 Aligned_cols=141 Identities=13% Similarity=0.163 Sum_probs=104.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +++++|+|+++.+++.+++++. ...+++.+|+.+... . ++||+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~--~-~~fD~v~ 111 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA------GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEV--P-TSIDTIV 111 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT------TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCC--C-SCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC------CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCC--C-CCeEEEE
Confidence 47899999999999998777764 4699999999999999998764 234889999887632 2 7899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----------------------- 177 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------- 177 (256)
++..+.+.++.. ...++..+.++|||||++++..+...
T Consensus 112 ~~~~l~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (220)
T 3hnr_A 112 STYAFHHLTDDE-------------------KNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLAND 172 (220)
T ss_dssp EESCGGGSCHHH-------------------HHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ECcchhcCChHH-------------------HHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhh
Confidence 987665443321 24589999999999999999864322
Q ss_pred -------CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEecCc
Q 025211 178 -------DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWRDFD 216 (256)
Q Consensus 178 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (256)
..+++.+.+++.||+....... ...+++...+.+.
T Consensus 173 ~~~~~~~~~~~~~~~l~~aGf~v~~~~~~----~~~w~~~~~~~~~ 214 (220)
T 3hnr_A 173 LQTEYYTRIPVMQTIFENNGFHVTFTRLN----HFVWVMEATKQLE 214 (220)
T ss_dssp HHHSCCCBHHHHHHHHHHTTEEEEEEECS----SSEEEEEEEECSC
T ss_pred cchhhcCCHHHHHHHHHHCCCEEEEeecc----ceEEEEeehhhhh
Confidence 2357788888999976554433 3445566655443
No 85
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.69 E-value=5.9e-16 Score=137.95 Aligned_cols=152 Identities=13% Similarity=0.167 Sum_probs=112.3
Q ss_pred eeccCCccccCC--chHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211 11 VSSHPEVYEPCD--DSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK 88 (256)
Q Consensus 11 ~~~~~~~~~p~~--~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~ 88 (256)
+.+.|+.|.+.. .++.+++++++.+. ..++.+|||+|||+|.+++.++.. ...|+|+|+++.+++.|++
T Consensus 256 ~~~~~~~f~q~n~~~~e~l~~~~~~~l~---~~~~~~VLDlgcG~G~~~~~la~~------~~~V~gvD~s~~al~~A~~ 326 (433)
T 1uwv_A 256 LTFSPRDFIQVNAGVNQKMVARALEWLD---VQPEDRVLDLFCGMGNFTLPLATQ------AASVVGVEGVPALVEKGQQ 326 (433)
T ss_dssp EECCSSSCCCSBHHHHHHHHHHHHHHHT---CCTTCEEEEESCTTTTTHHHHHTT------SSEEEEEESCHHHHHHHHH
T ss_pred EEECcccccccCHHHHHHHHHHHHHhhc---CCCCCEEEECCCCCCHHHHHHHhh------CCEEEEEeCCHHHHHHHHH
Confidence 567787776633 48888888887764 246789999999999999887764 4589999999999999999
Q ss_pred HHHHcCCcc-eEEEcchhhchhh--hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc
Q 025211 89 TLEAHNVHA-DLINTDIASGLEK--RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK 165 (256)
Q Consensus 89 ~~~~~~~~~-~~~~~d~~~~~~~--~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 165 (256)
|+..+++.. +++++|+.+.+.. +.+++||+|++||||... ..+++.+. .++|
T Consensus 327 n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~------------------------~~~~~~l~-~~~p 381 (433)
T 1uwv_A 327 NARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA------------------------AGVMQQII-KLEP 381 (433)
T ss_dssp HHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC------------------------HHHHHHHH-HHCC
T ss_pred HHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH------------------------HHHHHHHH-hcCC
Confidence 999998865 9999999885432 345689999999998521 23444444 3789
Q ss_pred CeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211 166 RGWLYLVTLTANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 166 gG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
++++++++.......+ ...+.+.||....+.
T Consensus 382 ~~ivyvsc~p~tlard-~~~l~~~Gy~~~~~~ 412 (433)
T 1uwv_A 382 IRIVYVSCNPATLARD-SEALLKAGYTIARLA 412 (433)
T ss_dssp SEEEEEESCHHHHHHH-HHHHHHTTCEEEEEE
T ss_pred CeEEEEECChHHHHhh-HHHHHHCCcEEEEEE
Confidence 9988885433332233 455666788876543
No 86
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.69 E-value=1e-15 Score=125.50 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=92.5
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
...+.+.+.+.+... ..++.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++....+....++++|
T Consensus 20 ~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d 92 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPK------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGG------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC
T ss_pred HHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHC------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecc
Confidence 345556666555422 136789999999999987666554 4589999999999999999998877766899999
Q ss_pred hhhchhhhcCCCccEEEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 104 IASGLEKRLAGLVDVMVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+.+... +++||+|+++. .+.+.... .....+++.+.++|+|||++++..
T Consensus 93 ~~~~~~---~~~fD~v~~~~~~l~~~~~~------------------~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 93 ISNLNI---NRKFDLITCCLDSTNYIIDS------------------DDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp GGGCCC---SCCEEEEEECTTGGGGCCSH------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCc---cCCceEEEEcCccccccCCH------------------HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 877532 27899999986 55443221 236788999999999999999843
No 87
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=4.2e-16 Score=131.31 Aligned_cols=121 Identities=17% Similarity=0.247 Sum_probs=95.1
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
..+.+.+.+.+..+ .++.+|||+|||+|.++..++.. .| +++|+|+|+++.+++.|++++...+.+.+++++|
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~----~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d 80 (284)
T 3gu3_A 7 DDYVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPL----LPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD 80 (284)
T ss_dssp HHHHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTT----SCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESC
T ss_pred hHHHHHHHHHHhcc--CCCCeEEEecCCCCHHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcc
Confidence 34455565555332 47899999999999987766655 55 4799999999999999999988777666999999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+.+... +++||+|+++..+.+.++ ...+++++.++|||||++++..+.
T Consensus 81 ~~~~~~---~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 81 ATEIEL---NDKYDIAICHAFLLHMTT---------------------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp TTTCCC---SSCEEEEEEESCGGGCSS---------------------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCc---CCCeeEEEECChhhcCCC---------------------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 987532 468999999766544332 468899999999999999987765
No 88
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.69 E-value=2.4e-16 Score=130.81 Aligned_cols=144 Identities=13% Similarity=0.123 Sum_probs=107.7
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
...++.+++.+. ..++.+|||+|||+|.++..++... +++|+|+|+++.+++.++++.... ...+++.+|+
T Consensus 41 ~~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~ 111 (266)
T 3ujc_A 41 LEATKKILSDIE---LNENSKVLDIGSGLGGGCMYINEKY-----GAHTHGIDICSNIVNMANERVSGN-NKIIFEANDI 111 (266)
T ss_dssp HHHHHHHTTTCC---CCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCT
T ss_pred HHHHHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECcc
Confidence 334455555442 3578899999999999998888863 469999999999999999876544 2348999998
Q ss_pred hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC--------
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-------- 176 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------- 176 (256)
.+. ++.+++||+|+++..+.+.+. .....+++.+.++|||||++++..+..
T Consensus 112 ~~~--~~~~~~fD~v~~~~~l~~~~~-------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 170 (266)
T 3ujc_A 112 LTK--EFPENNFDLIYSRDAILALSL-------------------ENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDD 170 (266)
T ss_dssp TTC--CCCTTCEEEEEEESCGGGSCH-------------------HHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCH
T ss_pred ccC--CCCCCcEEEEeHHHHHHhcCh-------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchH
Confidence 875 334689999999766554321 236789999999999999999976422
Q ss_pred -------------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 -------------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 -------------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
....++.+.+.+.||.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 171 EFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2356788888888988765543
No 89
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.69 E-value=1.6e-15 Score=123.83 Aligned_cols=159 Identities=13% Similarity=0.040 Sum_probs=106.0
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.++..+..+...++.+|||+|||+|.++..++.. .+...|+|+|+++.+++.++++...+ .+..++.+|+
T Consensus 57 ~~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~----~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~ 131 (230)
T 1fbn_A 57 SKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADI----ADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDA 131 (230)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHH----TTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCT
T ss_pred hHHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHH----cCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCC
Confidence 344455633333333357889999999999999888887 34569999999999999999987655 2348888998
Q ss_pred hhchh--hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC--C---
Q 025211 105 ASGLE--KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA--N--- 177 (256)
Q Consensus 105 ~~~~~--~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~--- 177 (256)
.+... +. .++||+|+.+++.. .....++..+.+.|||||+++++.... .
T Consensus 132 ~~~~~~~~~-~~~~D~v~~~~~~~-----------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 187 (230)
T 1fbn_A 132 NKPQEYANI-VEKVDVIYEDVAQP-----------------------NQAEILIKNAKWFLKKGGYGMIAIKARSIDVTK 187 (230)
T ss_dssp TCGGGGTTT-SCCEEEEEECCCST-----------------------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSS
T ss_pred CCccccccc-CccEEEEEEecCCh-----------------------hHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCC
Confidence 76321 22 26899999764320 014677999999999999999963211 1
Q ss_pred -----CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 178 -----DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 178 -----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
...++. .+.+.||...............+++.+.+
T Consensus 188 ~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 188 DPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp CHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred CHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 114455 77888998766554333222334444444
No 90
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.69 E-value=5.6e-16 Score=136.10 Aligned_cols=120 Identities=14% Similarity=0.144 Sum_probs=93.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--c-eEEEcchhhchhhhc--CCCc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--A-DLINTDIASGLEKRL--AGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~-~~~~~d~~~~~~~~~--~~~f 116 (256)
++.+|||+|||+|.+++.++.. + ...|+|+|+++.+++.|++|+..+++. . +++++|+.+.+.... ..+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~----g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG----G-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT----T-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCc
Confidence 5789999999999999988874 1 238999999999999999999999985 3 899999988654321 3589
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND 178 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (256)
|+|++|||++..+... .......+..++..+.++|+|||++++.++....
T Consensus 287 D~Ii~DPP~~~~~~~~------------~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 287 DIIIIDPPSFARNKKE------------VFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp EEEEECCCCC-----C------------CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred cEEEECCCCCCCChhh------------HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 9999999997432110 1122344677889999999999999998765553
No 91
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.68 E-value=6.5e-15 Score=120.18 Aligned_cols=159 Identities=13% Similarity=0.106 Sum_probs=108.1
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
...++..++..+..+..+++.+|||+|||+|..+..++..++ +++.|+|+|+++.+++.+.+..... .+..++.+|
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~---~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~D 133 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIE---LNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLAD 133 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHT---TTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECC
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhC---CCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcc
Confidence 556777787777655567899999999999999999988764 4679999999999976555444332 234888899
Q ss_pred hhhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----
Q 025211 104 IASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----- 177 (256)
Q Consensus 104 ~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----- 177 (256)
+..... ....++||+|+++.+.. + ....++..+.+.|||||+++++.....
T Consensus 134 a~~~~~~~~~~~~~D~I~~d~a~~---~--------------------~~~il~~~~~~~LkpGG~lvisik~~~~d~t~ 190 (232)
T 3id6_C 134 ARFPQSYKSVVENVDVLYVDIAQP---D--------------------QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTK 190 (232)
T ss_dssp TTCGGGTTTTCCCEEEEEECCCCT---T--------------------HHHHHHHHHHHHEEEEEEEEEEEC-------C
T ss_pred cccchhhhccccceEEEEecCCCh---h--------------------HHHHHHHHHHHhCCCCeEEEEEEccCCcccCC
Confidence 876432 12246899999987641 1 023344566669999999998642211
Q ss_pred ----CHHHHHHHHHHcCCcEEEEEec-CCCCccEEEE
Q 025211 178 ----DPSQICLQMMEKGYAARIVVQR-STEEENLHII 209 (256)
Q Consensus 178 ----~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~ 209 (256)
........+++.||+....... .....+..++
T Consensus 191 ~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~ 227 (232)
T 3id6_C 191 DPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVL 227 (232)
T ss_dssp CSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEE
Confidence 2345667888889887664433 3333454444
No 92
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.68 E-value=1.2e-16 Score=143.06 Aligned_cols=186 Identities=15% Similarity=0.169 Sum_probs=120.1
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccC---------CCceEEEEeCCHHHHHHH
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEV---------PGVQYIATDINPYAVEVT 86 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~---------~~~~v~giD~~~~~i~~a 86 (256)
.+|+|+... +.+.+.+. +.++.+|||+|||+|.+++.+++.+.+.. ++..++|+|+++.+++.|
T Consensus 152 ~fyTP~~v~----~~mv~~l~---~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA 224 (445)
T 2okc_A 152 QYFTPRPLI----QAMVDCIN---PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLA 224 (445)
T ss_dssp GGCCCHHHH----HHHHHHHC---CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHH
T ss_pred cccCcHHHH----HHHHHHhC---CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHH
Confidence 368885444 44444332 24678999999999999999888764321 235799999999999999
Q ss_pred HHHHHHcCCc---ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcc
Q 025211 87 RKTLEAHNVH---ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLL 163 (256)
Q Consensus 87 ~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 163 (256)
+.|+..+++. ..+.++|...... ..+||+|++||||................+ .... ....+++.+.++|
T Consensus 225 ~~nl~l~g~~~~~~~i~~gD~l~~~~---~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~-~~~~---~~~~fl~~~~~~L 297 (445)
T 2okc_A 225 SMNLYLHGIGTDRSPIVCEDSLEKEP---STLVDVILANPPFGTRPAGSVDINRPDFYV-ETKN---NQLNFLQHMMLML 297 (445)
T ss_dssp HHHHHHTTCCSSCCSEEECCTTTSCC---SSCEEEEEECCCSSCCCTTCCCCCCTTSSS-CCSC---HHHHHHHHHHHHE
T ss_pred HHHHHHhCCCcCCCCEeeCCCCCCcc---cCCcCEEEECCCCCCcccccchhhHhhcCC-CCcc---hHHHHHHHHHHHh
Confidence 9999998884 4899999876532 248999999999987655322100001111 1111 1357889999999
Q ss_pred ccCeEEEEEEeCC-----CCHHHHHHHHH-HcCCcEEEEEecC---CCCccEEEEEEEecC
Q 025211 164 SKRGWLYLVTLTA-----NDPSQICLQMM-EKGYAARIVVQRS---TEEENLHIIKFWRDF 215 (256)
Q Consensus 164 kpgG~l~~~~~~~-----~~~~~~~~~~~-~~g~~~~~~~~~~---~~~~~~~l~~~~~~~ 215 (256)
||||+++++.+.. .....+++.+. +..+..+...+.. .......++.+.+..
T Consensus 298 k~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~~ 358 (445)
T 2okc_A 298 KTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQ 358 (445)
T ss_dssp EEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEEEEEECCSSSSSSTTCCEEEEEEEESS
T ss_pred ccCCEEEEEECCcccccCcHHHHHHHHHHhcCcEEEEEeCCCCCccCCCCCEEEEEEECCC
Confidence 9999999988642 12345666554 4444433333321 112344555555543
No 93
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.68 E-value=6.3e-16 Score=125.70 Aligned_cols=122 Identities=11% Similarity=0.064 Sum_probs=94.8
Q ss_pred cCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc---
Q 025211 20 PCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--- 96 (256)
Q Consensus 20 p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--- 96 (256)
+.+.+..+...+..... .+++.+|||+|||+|..++.++..+ .++++|+++|+++++++.|++++...++.
T Consensus 37 i~~~~~~~l~~l~~~~~---~~~~~~vLdiG~G~G~~~~~la~~~---~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~ 110 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTN---GNGSTGAIAITPAAGLVGLYILNGL---ADNTTLTCIDPESEHQRQAKALFREAGYSPSR 110 (221)
T ss_dssp CCHHHHHHHHHHHHHSC---CTTCCEEEEESTTHHHHHHHHHHHS---CTTSEEEEECSCHHHHHHHHHHHHHTTCCGGG
T ss_pred CCHHHHHHHHHHHHhhC---CCCCCCEEEEcCCchHHHHHHHHhC---CCCCEEEEEECCHHHHHHHHHHHHHcCCCcCc
Confidence 34445555555554421 1234599999999999999998874 24679999999999999999999998876
Q ss_pred ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 97 ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 97 ~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
.+++.+|+.+.++...+++||+|+++.+.. .+..+++.+.++|+|||++++
T Consensus 111 i~~~~gda~~~l~~~~~~~fD~V~~d~~~~------------------------~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 111 VRFLLSRPLDVMSRLANDSYQLVFGQVSPM------------------------DLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEEECSCHHHHGGGSCTTCEEEEEECCCTT------------------------THHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEcCHHHHHHHhcCCCcCeEEEcCcHH------------------------HHHHHHHHHHHHcCCCcEEEE
Confidence 389999998876554468999999975421 156789999999999999998
No 94
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.68 E-value=9.1e-16 Score=127.17 Aligned_cols=129 Identities=12% Similarity=0.030 Sum_probs=94.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH------------------cCCcceEEEc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA------------------HNVHADLINT 102 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~------------------~~~~~~~~~~ 102 (256)
.++.+|||+|||+|..+..++.. +++|+|+|+|+.|++.|+++... .+...+++++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC
Confidence 36789999999999998887775 56999999999999999776431 1233489999
Q ss_pred chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC------
Q 025211 103 DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA------ 176 (256)
Q Consensus 103 d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------ 176 (256)
|+.+.... ..++||+|+++..+...+... ...+++.+.++|||||++++++...
T Consensus 141 D~~~l~~~-~~~~FD~V~~~~~l~~l~~~~-------------------~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~ 200 (252)
T 2gb4_A 141 SIFDLPRA-NIGKFDRIWDRGALVAINPGD-------------------HDRYADIILSLLRKEFQYLVAVLSYDPTKHA 200 (252)
T ss_dssp CTTTGGGG-CCCCEEEEEESSSTTTSCGGG-------------------HHHHHHHHHHTEEEEEEEEEEEEECCTTSCC
T ss_pred ccccCCcc-cCCCEEEEEEhhhhhhCCHHH-------------------HHHHHHHHHHHcCCCeEEEEEEEecCCccCC
Confidence 99886432 127899999987766554322 4678999999999999997654221
Q ss_pred -----CCHHHHHHHHHHcCCcEEEE
Q 025211 177 -----NDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 177 -----~~~~~~~~~~~~~g~~~~~~ 196 (256)
-..+++.+.+.. +|+....
T Consensus 201 g~~~~~~~~el~~~l~~-~f~v~~~ 224 (252)
T 2gb4_A 201 GPPFYVPSAELKRLFGT-KCSMQCL 224 (252)
T ss_dssp CSSCCCCHHHHHHHHTT-TEEEEEE
T ss_pred CCCCCCCHHHHHHHhhC-CeEEEEE
Confidence 234677777765 4655443
No 95
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.68 E-value=7.8e-16 Score=127.05 Aligned_cols=134 Identities=13% Similarity=0.141 Sum_probs=103.4
Q ss_pred cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEE
Q 025211 40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
..++.+|||+|||+|.++..++... ...++|+|+++.+++.+++++... ...+++++|+.+. ++.+++||+|
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~--~~~~~~fD~v 162 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-----YATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETA--TLPPNTYDLI 162 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-----CSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGC--CCCSSCEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-----cCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHC--CCCCCCeEEE
Confidence 3578999999999999988877763 347999999999999999987544 2348899998775 2345789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC---------------CCHHHHHH
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA---------------NDPSQICL 184 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------~~~~~~~~ 184 (256)
++...+.+.+. .....++..+.++|||||++++..+.. ...+++.+
T Consensus 163 ~~~~~l~~~~~-------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
T 1xtp_A 163 VIQWTAIYLTD-------------------ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKR 223 (254)
T ss_dssp EEESCGGGSCH-------------------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHH
T ss_pred EEcchhhhCCH-------------------HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHH
Confidence 99766543322 125788999999999999999977421 13478899
Q ss_pred HHHHcCCcEEEEEecC
Q 025211 185 QMMEKGYAARIVVQRS 200 (256)
Q Consensus 185 ~~~~~g~~~~~~~~~~ 200 (256)
.+.+.||....+....
T Consensus 224 ~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 224 LFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHHTCCEEEEEECT
T ss_pred HHHHCCCEEEEeeecC
Confidence 9999999987765543
No 96
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.68 E-value=1.3e-15 Score=128.88 Aligned_cols=146 Identities=12% Similarity=0.105 Sum_probs=108.6
Q ss_pred HHHHHHHHHhhccc-ccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEE
Q 025211 25 FALVDALLADRINL-VEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLIN 101 (256)
Q Consensus 25 ~~l~~~l~~~~~~~-~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~ 101 (256)
...++.++..+... ...++.+|||+|||+|.++..+++.. +++++|+|+++.+++.|+++....++. .+++.
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 138 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-----GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-----CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 34445555554100 12578899999999999998888763 358999999999999999999888764 38999
Q ss_pred cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----
Q 025211 102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---- 177 (256)
Q Consensus 102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---- 177 (256)
+|+.+. ++.+++||+|+++..+.+.++ ...+++++.++|||||++++..+...
T Consensus 139 ~d~~~~--~~~~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 195 (297)
T 2o57_A 139 GSFLEI--PCEDNSYDFIWSQDAFLHSPD---------------------KLKVFQECARVLKPRGVMAITDPMKEDGID 195 (297)
T ss_dssp CCTTSC--SSCTTCEEEEEEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEEEECTTCC
T ss_pred cCcccC--CCCCCCEeEEEecchhhhcCC---------------------HHHHHHHHHHHcCCCeEEEEEEeccCCCCc
Confidence 998775 334578999999766544332 46889999999999999999764221
Q ss_pred -----------------CHHHHHHHHHHcCCcEEEEEe
Q 025211 178 -----------------DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 178 -----------------~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...++.+.+.+.||....+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 196 KSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp GGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 344566778888887665543
No 97
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.68 E-value=3.3e-16 Score=138.89 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=117.5
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN 94 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~ 94 (256)
..+|+| ..+++.+.+.+.. .++.+|||+|||+|.+++.+++... ++..++|+|+++.+++.|
T Consensus 19 g~~~TP----~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~---~~~~i~gvDi~~~~~~~a-------- 80 (421)
T 2ih2_A 19 GRVETP----PEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHG---TAYRFVGVEIDPKALDLP-------- 80 (421)
T ss_dssp --CCCC----HHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHC---SCSEEEEEESCTTTCCCC--------
T ss_pred ceEeCC----HHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhC---CCCeEEEEECCHHHHHhC--------
Confidence 457888 5566666665532 3567999999999999988887642 456999999999999877
Q ss_pred CcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCccc----ccccchh------hhcCCCCcHHHHHHHHHHHhhccc
Q 025211 95 VHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEV----GREGIAS------AWAGGENGRAVIDKILPSADKLLS 164 (256)
Q Consensus 95 ~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~Lk 164 (256)
...+++++|+.+... .++||+|++||||........ ...+... ....+. .+....+++.+.++|+
T Consensus 81 ~~~~~~~~D~~~~~~---~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~fl~~~~~~Lk 155 (421)
T 2ih2_A 81 PWAEGILADFLLWEP---GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGK--YNLYGAFLEKAVRLLK 155 (421)
T ss_dssp TTEEEEESCGGGCCC---SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTT--CCHHHHHHHHHHHHEE
T ss_pred CCCcEEeCChhhcCc---cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCC--ccHHHHHHHHHHHHhC
Confidence 134899999887632 368999999999987554210 0000000 111111 2346688999999999
Q ss_pred cCeEEEEEEeCC----CCHHHHHHHHHHcCCcEEEEEecC--CCCccEEEEEEEecC
Q 025211 165 KRGWLYLVTLTA----NDPSQICLQMMEKGYAARIVVQRS--TEEENLHIIKFWRDF 215 (256)
Q Consensus 165 pgG~l~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~l~~~~~~~ 215 (256)
|||+++++.+.. .....+++.+.+.++......... .......++.+.|..
T Consensus 156 ~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i~~l~~~F~~~~~~~~il~~~k~~ 212 (421)
T 2ih2_A 156 PGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSG 212 (421)
T ss_dssp EEEEEEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEEEESCSTTCCCCEEEEEEESSS
T ss_pred CCCEEEEEEChHHhcCccHHHHHHHHHhcCCeEEEECCCCCCCCCccEEEEEEEeCC
Confidence 999999988753 235678888888776322222221 223445666666644
No 98
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.68 E-value=2.4e-15 Score=134.69 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=106.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|..+..++..+. ..+.|+|+|+++.+++.+++|+..+++.+ .++++|+.+....+.+++||+|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~---~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~V 334 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMK---NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKV 334 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT---TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC---CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEE
Confidence 5788999999999999999988742 12699999999999999999999998854 8899998776432333689999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHH----HHHHHHHHHhhccccCeEEEEEEeCCCC---HHHHHHHHHHc-CC
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRA----VIDKILPSADKLLSKRGWLYLVTLTAND---PSQICLQMMEK-GY 191 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~~~~~-g~ 191 (256)
++|||+..... ..+.+...|........ ....++..+.++|||||++++++++... ...+...+.++ +|
T Consensus 335 l~D~Pcsg~g~---~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~ 411 (450)
T 2yxl_A 335 LLDAPCTSSGT---IGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEF 411 (450)
T ss_dssp EEECCCCCGGG---TTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSC
T ss_pred EEcCCCCCCee---eccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCC
Confidence 99999854321 11222222222111111 2367899999999999999998886652 23456666665 56
Q ss_pred cE
Q 025211 192 AA 193 (256)
Q Consensus 192 ~~ 193 (256)
..
T Consensus 412 ~~ 413 (450)
T 2yxl_A 412 KL 413 (450)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 99
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.67 E-value=1.2e-15 Score=130.17 Aligned_cols=129 Identities=11% Similarity=0.127 Sum_probs=101.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++.. +++|+|+|+++.+++.|++++..+++. .+++.+|+.+. ++.+++||+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~ 188 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-----GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT--PFDKGAVTA 188 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC--CCCTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC--CCCCCCEeE
Confidence 578999999999999998888763 468999999999999999999998876 48999999875 334579999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------------- 177 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------------- 177 (256)
|+++..+.+.. ...+++.+.++|||||++++++....
T Consensus 189 V~~~~~l~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
T 3vc1_A 189 SWNNESTMYVD----------------------LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNI 246 (312)
T ss_dssp EEEESCGGGSC----------------------HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCC
T ss_pred EEECCchhhCC----------------------HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCC
Confidence 99975543221 57889999999999999999774222
Q ss_pred -CHHHHHHHHHHcCCcEEEEEe
Q 025211 178 -DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 178 -~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...++.+.+++.||....+..
T Consensus 247 ~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 247 HSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp CBHHHHHHHHHTTTEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCEEEEEEe
Confidence 234567777777877655443
No 100
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=5.9e-16 Score=126.06 Aligned_cols=131 Identities=18% Similarity=0.282 Sum_probs=103.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC------cceEEEcchhhchhhhcCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV------HADLINTDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~~ 114 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.+++++...++ ...+..+|+.+. ++.++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~ 100 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL--SFHDS 100 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC--CSCTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc--CCCCC
Confidence 46889999999999998887765 45999999999999999999887766 237888998765 23457
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC-------------------
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT------------------- 175 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------------------- 175 (256)
+||+|+++..+.+.++. .....+++.+.++|+|||+++++...
T Consensus 101 ~~D~v~~~~~l~~~~~~------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDP------------------KERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPIT 162 (235)
T ss_dssp CEEEEEEESCGGGCCCH------------------HHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHH
T ss_pred ceeEEEEcchhhcCCCH------------------HHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccch
Confidence 89999998776654432 12458899999999999999997542
Q ss_pred ---------------------CCCHHHHHHHHHHcCCcEEEEE
Q 025211 176 ---------------------ANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 176 ---------------------~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
....+++.+.+++.||+.+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 163 KEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp CSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred hhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 2246788899999999876544
No 101
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=5.2e-16 Score=126.44 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=106.2
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
....|+++++.+++.++.... .++.+|||+|||+|.++..++.. +++|+|+|+++.+++.++++ ..
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~----~~ 91 (226)
T 3m33_A 26 ARVLSGPDPELTFDLWLSRLL----TPQTRVLEAGCGHGPDAARFGPQ------AARWAAYDFSPELLKLARAN----AP 91 (226)
T ss_dssp CCEESSSCTTHHHHHHHHHHC----CTTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHH----CT
T ss_pred ccccCCCCHHHHHHHHHHhcC----CCCCeEEEeCCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHh----CC
Confidence 345677777788887776542 47899999999999987766654 46999999999999999987 22
Q ss_pred cceEEEcchhhchhhhc-CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 96 HADLINTDIASGLEKRL-AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 96 ~~~~~~~d~~~~~~~~~-~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
..+++++|+.+..+ +. +++||+|++++. ...++..+.++|||||+++. ..
T Consensus 92 ~~~~~~~d~~~~~~-~~~~~~fD~v~~~~~---------------------------~~~~l~~~~~~LkpgG~l~~-~~ 142 (226)
T 3m33_A 92 HADVYEWNGKGELP-AGLGAPFGLIVSRRG---------------------------PTSVILRLPELAAPDAHFLY-VG 142 (226)
T ss_dssp TSEEEECCSCSSCC-TTCCCCEEEEEEESC---------------------------CSGGGGGHHHHEEEEEEEEE-EE
T ss_pred CceEEEcchhhccC-CcCCCCEEEEEeCCC---------------------------HHHHHHHHHHHcCCCcEEEE-eC
Confidence 34899999865433 33 579999999731 24668899999999999994 33
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEE
Q 025211 175 TANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 175 ~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
.......+...+.+.||....+.
T Consensus 143 ~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 143 PRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp SSSCCTHHHHHHHHTTCEEEEEE
T ss_pred CcCCHHHHHHHHHHCCCeEEEEE
Confidence 44456788999999999865544
No 102
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=2e-16 Score=129.91 Aligned_cols=112 Identities=13% Similarity=-0.008 Sum_probs=88.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||||||+|..+..+++. .+ .++++||+++.+++.|+++....+....++.+|+.+....+.+++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~----~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEA----PI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTS----CE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHh----CC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence 57899999999999976555443 44 48999999999999999998877777789999998877777778999999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.++....... ........+++++.++|||||++++..
T Consensus 134 ~D~~~~~~~~----------------~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 134 YDTYPLSEET----------------WHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ECCCCCBGGG----------------TTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred Eeeeecccch----------------hhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 8764321111 012236788999999999999998843
No 103
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.67 E-value=4.1e-16 Score=127.56 Aligned_cols=130 Identities=18% Similarity=0.171 Sum_probs=101.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC--cceEEEcchhhchhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV--HADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
++.+|||+|||+|.++..++. ++..|+|+|+++.+++.|++++...+. ..+++.+|+.+... +++||+|
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v 136 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP---TELFDLI 136 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC---SSCEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC---CCCeeEE
Confidence 456999999999998765543 467899999999999999999876443 23899999988642 4689999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC----------CCHHHHHHHHHHc
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------NDPSQICLQMMEK 189 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~~~~~ 189 (256)
+++..+.+.+... ...+++.+.++|+|||+++++.... ...+++...+.+.
T Consensus 137 ~~~~~l~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 197 (235)
T 3lcc_A 137 FDYVFFCAIEPEM-------------------RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPI 197 (235)
T ss_dssp EEESSTTTSCGGG-------------------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGG
T ss_pred EEChhhhcCCHHH-------------------HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHc
Confidence 9987776554322 5788999999999999999866432 2357889999999
Q ss_pred CCcEEEEEec
Q 025211 190 GYAARIVVQR 199 (256)
Q Consensus 190 g~~~~~~~~~ 199 (256)
||....+...
T Consensus 198 Gf~~~~~~~~ 207 (235)
T 3lcc_A 198 GFKAVSVEEN 207 (235)
T ss_dssp TEEEEEEEEC
T ss_pred CCeEEEEEec
Confidence 9988766543
No 104
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.67 E-value=1.3e-15 Score=122.69 Aligned_cols=125 Identities=14% Similarity=0.215 Sum_probs=97.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.+++ .+.. .+++++|+.+. ..+++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~---~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL------ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW---TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC---CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC---CCCCceeEE
Confidence 46689999999999998888776 4599999999999999987 4433 48999999876 235799999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------- 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------- 176 (256)
+++..+.+.+++ ....+++.+.++|+|||+++++....
T Consensus 112 ~~~~~l~~~~~~-------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3ou2_A 112 FFAHWLAHVPDD-------------------RFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQD 172 (218)
T ss_dssp EEESCGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTT
T ss_pred EEechhhcCCHH-------------------HHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCC
Confidence 997655443321 15788999999999999999976522
Q ss_pred ----------CCHHHHHHHHHHcCCcEEEEE
Q 025211 177 ----------NDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 177 ----------~~~~~~~~~~~~~g~~~~~~~ 197 (256)
....++.+.+++.||++....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 173 GRSFRIVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp SCEEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cchhhHhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 145678888888898854433
No 105
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.67 E-value=1.9e-15 Score=124.03 Aligned_cols=105 Identities=16% Similarity=0.205 Sum_probs=86.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..++.. + ..++|+|+++.+++.+++++..++... .++.+|+.+. ++.+++||+|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~----~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~v 91 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPY----V--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL--PFPDDSFDII 91 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG----S--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC--CSCTTCEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHh----C--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC--CCCCCcEEEE
Confidence 57899999999999988776654 3 389999999999999999998888664 8999998764 3445789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
+++..+++.++ ...++.++.++|||||+++++..
T Consensus 92 ~~~~~l~~~~~---------------------~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 92 TCRYAAHHFSD---------------------VRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCchhhccC---------------------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 99765543322 46889999999999999999764
No 106
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.67 E-value=1.9e-15 Score=123.81 Aligned_cols=136 Identities=16% Similarity=0.217 Sum_probs=104.2
Q ss_pred HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA 105 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~ 105 (256)
.+.+.+...+ .++.+|||+|||+|.++..++.. +++++|+|+++.+++.++++. .....+++.+|+.
T Consensus 42 ~~~~~l~~~~-----~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~ 108 (242)
T 3l8d_A 42 TIIPFFEQYV-----KKEAEVLDVGCGDGYGTYKLSRT------GYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLS 108 (242)
T ss_dssp THHHHHHHHS-----CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTT
T ss_pred HHHHHHHHHc-----CCCCeEEEEcCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchh
Confidence 4455555544 36789999999999998877765 458999999999999998864 2223489999988
Q ss_pred hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC---------
Q 025211 106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA--------- 176 (256)
Q Consensus 106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------- 176 (256)
+.. +.+++||+|+++..+.+.++ ...++..+.++|+|||++++.....
T Consensus 109 ~~~--~~~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 165 (242)
T 3l8d_A 109 SLP--FENEQFEAIMAINSLEWTEE---------------------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSY 165 (242)
T ss_dssp BCS--SCTTCEEEEEEESCTTSSSC---------------------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG
T ss_pred cCC--CCCCCccEEEEcChHhhccC---------------------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh
Confidence 753 34689999999877765433 4688999999999999999977432
Q ss_pred ------------CCHHHHHHHHHHcCCcEEEEE
Q 025211 177 ------------NDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 177 ------------~~~~~~~~~~~~~g~~~~~~~ 197 (256)
....++.+.+.+.||+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 166 PRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp GGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 134578899999999876544
No 107
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.67 E-value=1.5e-15 Score=123.25 Aligned_cols=124 Identities=18% Similarity=0.249 Sum_probs=94.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcC----CC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLA----GL 115 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~----~~ 115 (256)
++.+|||+|||+|..++.+++.+ .++++|+++|+++.+++.|++++..+++. .+++.+|+.+.++.... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~---~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLL---QPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTS---CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhC---CCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 67899999999999998888753 23679999999999999999999999886 38999999876554322 68
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcC
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKG 190 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 190 (256)
||+|+++.+... ......++..+ ++|+|||++++.........++.+.+.+..
T Consensus 135 fD~V~~d~~~~~---------------------~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~ 187 (221)
T 3u81_A 135 LDMVFLDHWKDR---------------------YLPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSS 187 (221)
T ss_dssp CSEEEECSCGGG---------------------HHHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCT
T ss_pred eEEEEEcCCccc---------------------chHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCC
Confidence 999999754211 11133566677 999999999985554444556677776654
No 108
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.67 E-value=2e-15 Score=132.02 Aligned_cols=130 Identities=12% Similarity=0.102 Sum_probs=100.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+| |+|.+++.++.. +++.+|+|+|+++.+++.|++|+..+++. .+++.+|+.+.++...+++||+|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~----~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS----GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH----TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEE
Confidence 3678999999 999999888776 56579999999999999999999998874 58999999884432224689999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEE-EEEEeC-CCCH---HHHHHHHH-HcCCcE
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWL-YLVTLT-ANDP---SQICLQMM-EKGYAA 193 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l-~~~~~~-~~~~---~~~~~~~~-~~g~~~ 193 (256)
++||||... ....++..+.++|+|||++ ++.... .... .++.+.+. +.|+..
T Consensus 246 i~~~p~~~~----------------------~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 246 ITDPPETLE----------------------AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp EECCCSSHH----------------------HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred EECCCCchH----------------------HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 999998521 1368899999999999954 554443 1344 56667776 778766
Q ss_pred EEEE
Q 025211 194 RIVV 197 (256)
Q Consensus 194 ~~~~ 197 (256)
..+.
T Consensus 304 ~~~~ 307 (373)
T 2qm3_A 304 TDII 307 (373)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 5444
No 109
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.67 E-value=8.6e-16 Score=127.19 Aligned_cols=126 Identities=13% Similarity=0.074 Sum_probs=101.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-CCcc-eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-NVHA-DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-~~~~-~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..++..+ +|+.+++++|+++.+++.|++++..+ +... +++.+|+.+. ++.+++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAV---GEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH---CTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHh---CCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCE
Confidence 578899999999999998888765 35679999999999999999999887 7443 8999998876 223468999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
|++++|- ...++..+.++|+|||+++++.+......++.+.+.+.||......
T Consensus 170 v~~~~~~--------------------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 170 VALDLME--------------------------PWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp EEEESSC--------------------------GGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEE
T ss_pred EEECCcC--------------------------HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEE
Confidence 9998762 2367899999999999999988765455677777878888765444
No 110
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.67 E-value=2e-15 Score=119.82 Aligned_cols=126 Identities=13% Similarity=0.134 Sum_probs=97.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.+++++..++++ .+++.+|+.+.. . +++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~-~~~~D~v 101 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT--F-DRQYDFI 101 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC--C-CCCEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC--C-CCCceEE
Confidence 36789999999999998877764 459999999999999999999888874 489999988753 2 5789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-------------CCHHHHHHHH
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-------------NDPSQICLQM 186 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------~~~~~~~~~~ 186 (256)
+++.++.+.+... ...++..+.++|+|||+++++.... -..+++.+.+
T Consensus 102 ~~~~~l~~~~~~~-------------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (199)
T 2xvm_A 102 LSTVVLMFLEAKT-------------------IPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY 162 (199)
T ss_dssp EEESCGGGSCGGG-------------------HHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHT
T ss_pred EEcchhhhCCHHH-------------------HHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHh
Confidence 9987765543221 5788999999999999988865321 1345777777
Q ss_pred HHcCCcEEEE
Q 025211 187 MEKGYAARIV 196 (256)
Q Consensus 187 ~~~g~~~~~~ 196 (256)
.. |+....
T Consensus 163 ~~--f~~~~~ 170 (199)
T 2xvm_A 163 EG--WERVKY 170 (199)
T ss_dssp TT--SEEEEE
T ss_pred cC--CeEEEe
Confidence 65 665444
No 111
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.67 E-value=9.8e-16 Score=139.49 Aligned_cols=171 Identities=18% Similarity=0.184 Sum_probs=120.3
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN 94 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~ 94 (256)
..+|+|+....++++.+..... +.++.+|+|+|||||.+++.+++.+.. .....++|+|+++.++..|+.|+..++
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~---~~~~~~VlDPaCGSG~fLi~a~~~l~~-~~~~~i~G~Eid~~~~~lA~~Nl~l~g 272 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGRE---DKQGFTLYDATMGSGSLLLNAKRYSRQ-PQTVVYFGQELNTSTYNLARMNMILHG 272 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCT---TCTTCEEEETTCTTSTTGGGHHHHCSC-TTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CeecccHHHHHHHHHHHhcccC---CCCCCEEeecccchhHHHHHHHHHHHh-ccCceEEEEECcHHHHHHHHHHHHHcC
Confidence 4589998777777776654321 146789999999999999988887653 235689999999999999999999999
Q ss_pred Cc--c-eEEEcchhhch-hhhcCCCccEEEECCCCCCCCCcccc-cccchhhhcC----CCCcHHHHHHHHHHHhhccc-
Q 025211 95 VH--A-DLINTDIASGL-EKRLAGLVDVMVVNPPYVPTPEDEVG-REGIASAWAG----GENGRAVIDKILPSADKLLS- 164 (256)
Q Consensus 95 ~~--~-~~~~~d~~~~~-~~~~~~~fD~Ii~npP~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~l~~~~~~Lk- 164 (256)
+. . .+.++|..... +.....+||+|++||||......... .........+ .... -..++..+.+.|+
T Consensus 273 i~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~---~~~Fl~~~l~~Lk~ 349 (542)
T 3lkd_A 273 VPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKA---DFAFLLHGYYHLKQ 349 (542)
T ss_dssp CCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCC---HHHHHHHHHHTBCT
T ss_pred CCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchh---hHHHHHHHHHHhCC
Confidence 84 2 78999987652 12235789999999999854322111 1111111011 1111 2258899999999
Q ss_pred cCeEEEEEEeCCC----C-HHHHHHHHHHcCCc
Q 025211 165 KRGWLYLVTLTAN----D-PSQICLQMMEKGYA 192 (256)
Q Consensus 165 pgG~l~~~~~~~~----~-~~~~~~~~~~~g~~ 192 (256)
+||++.++.+... . ...+++.+.+.+.-
T Consensus 350 ~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l 382 (542)
T 3lkd_A 350 DNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAI 382 (542)
T ss_dssp TTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCE
T ss_pred CceeEEEEecchHhhCCchhHHHHHHHHhCCce
Confidence 9999999887542 1 35688888777653
No 112
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.67 E-value=9.1e-16 Score=132.40 Aligned_cols=115 Identities=17% Similarity=0.177 Sum_probs=94.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++. +. ....|+|+|+|+.+++.|++|+..+++. .+++++|+.+.. ++||+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~------~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-----~~fD~ 261 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK------NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-----VKGNR 261 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT------TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-----CCEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-----CCCcE
Confidence 3689999999999999876 54 2468999999999999999999999984 399999998874 68999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHc-CCcE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEK-GYAA 193 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-g~~~ 193 (256)
|++|||++ ...++..+.++|+|||++++.+.... .....+.+.+. ++..
T Consensus 262 Vi~dpP~~-------------------------~~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~~~~~i 311 (336)
T 2yx1_A 262 VIMNLPKF-------------------------AHKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKKCDCEV 311 (336)
T ss_dssp EEECCTTT-------------------------GGGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHHSEEEE
T ss_pred EEECCcHh-------------------------HHHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHhcCCcE
Confidence 99999975 23668888899999999999776655 55666677666 5553
No 113
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.67 E-value=9.3e-16 Score=135.24 Aligned_cols=121 Identities=17% Similarity=0.191 Sum_probs=95.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhh--cCCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKR--LAGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~--~~~~f 116 (256)
+++.+|||+|||+|.+++.++.. +...|+|+|+++.+++.|++|+..+++. .+++++|+.+..... ...+|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-----g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-----GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-----CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCC
Confidence 36899999999999999888874 2348999999999999999999999985 399999998875432 24689
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND 178 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (256)
|+|++|||++..+..... .....+..++..+.++|+|||++++++++...
T Consensus 291 D~Vi~dpP~~~~~~~~~~------------~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 340 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLK------------AGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV 340 (396)
T ss_dssp EEEEECCCCSCSSGGGHH------------HHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS
T ss_pred CEEEECCCCCCCCHHHHH------------HHHHHHHHHHHHHHHhcCCCcEEEEEECCCCC
Confidence 999999999765432110 01234678899999999999999998776543
No 114
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.66 E-value=8.5e-16 Score=128.11 Aligned_cols=166 Identities=11% Similarity=0.061 Sum_probs=108.5
Q ss_pred HHHHHHHhhccc---ccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC--------
Q 025211 27 LVDALLADRINL---VEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-------- 95 (256)
Q Consensus 27 l~~~l~~~~~~~---~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-------- 95 (256)
+.++++..+..+ ...++.+|||+|||+|.+++.++.. +. ..|+|+|+|+.|++.|++++..+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~----~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~ 111 (263)
T 2a14_A 37 MLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACD----SF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAV 111 (263)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGG----TE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHh----hh-cceeeccccHHHHHHHHHHHhcCCCcccchHHH
Confidence 456665555433 2357789999999999764333222 11 2699999999999999988754320
Q ss_pred ----------------------cc-eEEEcchhhchh--hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHH
Q 025211 96 ----------------------HA-DLINTDIASGLE--KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRA 150 (256)
Q Consensus 96 ----------------------~~-~~~~~d~~~~~~--~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
.. +++.+|+.+..+ +...++||+|+++..+++... ...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~-----------------~~~ 174 (263)
T 2a14_A 112 KFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC-----------------SLD 174 (263)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS-----------------SHH
T ss_pred HHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC-----------------CHH
Confidence 01 278888877422 112468999999754322100 012
Q ss_pred HHHHHHHHHhhccccCeEEEEEEeCC---------------CCHHHHHHHHHHcCCcEEEEEecC-------CCCccEEE
Q 025211 151 VIDKILPSADKLLSKRGWLYLVTLTA---------------NDPSQICLQMMEKGYAARIVVQRS-------TEEENLHI 208 (256)
Q Consensus 151 ~~~~~l~~~~~~LkpgG~l~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~l 208 (256)
.+..++.++.++|||||++++..... -..+++.+.+.+.||......... ...+.+++
T Consensus 175 ~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~ 254 (263)
T 2a14_A 175 AYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCC 254 (263)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEE
Confidence 35688999999999999999975321 146688999999999876554321 11235566
Q ss_pred EEEEec
Q 025211 209 IKFWRD 214 (256)
Q Consensus 209 ~~~~~~ 214 (256)
+.++|.
T Consensus 255 ~~a~K~ 260 (263)
T 2a14_A 255 IVARKK 260 (263)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 666663
No 115
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.66 E-value=1.7e-15 Score=128.48 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=88.3
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC----cceEE
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV----HADLI 100 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~----~~~~~ 100 (256)
...+..+++.+. .++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.|++++...+. ..+++
T Consensus 69 ~~~~~~~~~~~~----~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~ 138 (299)
T 3g2m_A 69 TSEAREFATRTG----PVSGPVLELAAGMGRLTFPFLDL------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLV 138 (299)
T ss_dssp HHHHHHHHHHHC----CCCSCEEEETCTTTTTHHHHHTT------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred cHHHHHHHHhhC----CCCCcEEEEeccCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEE
Confidence 344455555543 34569999999999988777654 46899999999999999999887763 35899
Q ss_pred EcchhhchhhhcCCCccEEEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 101 NTDIASGLEKRLAGLVDVMVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 101 ~~d~~~~~~~~~~~~fD~Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
++|+.+... +++||+|++.. .+...+ ......+++.+.++|||||++++..+.
T Consensus 139 ~~d~~~~~~---~~~fD~v~~~~~~~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 139 QGDMSAFAL---DKRFGTVVISSGSINELD-------------------EADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ECBTTBCCC---SCCEEEEEECHHHHTTSC-------------------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eCchhcCCc---CCCcCEEEECCcccccCC-------------------HHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 999988532 57899999742 121111 123578899999999999999996643
No 116
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.66 E-value=4.7e-15 Score=124.80 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=85.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++.. +++|+|+|+++.+++.+++++...++. .+++.+|+.+. +++||+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~fD~ 132 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKY-----DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF-----DEPVDR 132 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-----CCCCSE
T ss_pred CCcCEEEEECCcccHHHHHHHHHc-----CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-----CCCeeE
Confidence 578899999999999998888652 349999999999999999999877764 38889998654 278999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
|++...+.+.+... ...+++.+.++|||||++++..+.
T Consensus 133 v~~~~~l~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 133 IVSIGAFEHFGHER-------------------YDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp EEEESCGGGTCTTT-------------------HHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEeCchhhcChHH-------------------HHHHHHHHHHhcCCCCEEEEEEec
Confidence 99976655443211 578899999999999999997653
No 117
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.66 E-value=1.6e-15 Score=127.74 Aligned_cols=106 Identities=19% Similarity=0.280 Sum_probs=89.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++..+++..+++.+|+.+... +++||+|+
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~---~~~fD~i~ 189 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL------GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI---QENYDFIV 189 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC---CSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc---cCCccEEE
Confidence 36899999999999998887775 4589999999999999999999988866999999987633 57899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
++.++++.+... ...++..+.++|+|||+++++..
T Consensus 190 ~~~~~~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 190 STVVFMFLNRER-------------------VPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp ECSSGGGSCGGG-------------------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EccchhhCCHHH-------------------HHHHHHHHHHhcCCCcEEEEEEe
Confidence 998876554332 57899999999999999887654
No 118
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.66 E-value=1.9e-16 Score=144.36 Aligned_cols=167 Identities=14% Similarity=0.112 Sum_probs=113.1
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC-----------CceEEEEeCCHHHH
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP-----------GVQYIATDINPYAV 83 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-----------~~~v~giD~~~~~i 83 (256)
..+|+|+....++++.+.. .+ .+|||+|||||.+++.++..+.+..+ ...++|+|+++.++
T Consensus 225 G~fyTP~~Vv~lmv~ll~p-------~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLEP-------YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp TTTCCCHHHHHHHHHHHCC-------CS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred CeEeCCHHHHHHHHHHHhc-------CC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 4589997666666665421 22 49999999999999988776532111 35899999999999
Q ss_pred HHHHHHHHHcCCcceE--EEcchhhchhhhcCCCccEEEECCCCCCCCCc-ccccccchhhhcC--------C-CCcHHH
Q 025211 84 EVTRKTLEAHNVHADL--INTDIASGLEKRLAGLVDVMVVNPPYVPTPED-EVGREGIASAWAG--------G-ENGRAV 151 (256)
Q Consensus 84 ~~a~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~-~~~~~~~~~~~~~--------~-~~~~~~ 151 (256)
+.|+.|+..+++...+ .++|..... .....+||+|++||||...... +......... .+ . ..+. .
T Consensus 297 ~lA~~Nl~l~gi~~~i~i~~gDtL~~~-~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~-~g~~~~~~~~~~~~~~-~ 373 (544)
T 3khk_A 297 KLAAMNMVIRGIDFNFGKKNADSFLDD-QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWT-INTNGEKRILTPPTGN-A 373 (544)
T ss_dssp HHHHHHHHHTTCCCBCCSSSCCTTTSC-SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGE-ECCC--CEECCCCTTC-T
T ss_pred HHHHHHHHHhCCCcccceeccchhcCc-ccccccccEEEECCCcCCccccchhhhhhhhhh-cCcccccccccCCCcc-h
Confidence 9999999999886544 788866542 2234689999999999864321 1111111111 11 1 1111 1
Q ss_pred HHHHHHHHhhccccCeEEEEEEeCCC------CHHHHHHHHHHcCCc
Q 025211 152 IDKILPSADKLLSKRGWLYLVTLTAN------DPSQICLQMMEKGYA 192 (256)
Q Consensus 152 ~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~~~~~~~~~~g~~ 192 (256)
...+++.+.+.|+|||++.++.+... ....+++.+.+.+.-
T Consensus 374 ~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l 420 (544)
T 3khk_A 374 NFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLV 420 (544)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCcH
Confidence 22588999999999999999887421 345788888877653
No 119
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.66 E-value=6e-16 Score=135.23 Aligned_cols=129 Identities=14% Similarity=0.172 Sum_probs=97.1
Q ss_pred eeccC-CccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211 11 VSSHP-EVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK 88 (256)
Q Consensus 11 ~~~~~-~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~ 88 (256)
+.+.| +++++.+. ++.+++++++.+. ..+.+|||+|||+|.+++.++.. ...|+|+|+++.+++.|++
T Consensus 184 ~~~~~~~F~Q~n~~~~~~l~~~~~~~~~----~~~~~vLDl~cG~G~~~l~la~~------~~~V~gvd~~~~ai~~a~~ 253 (369)
T 3bt7_A 184 YRQVENSFTQPNAAMNIQMLEWALDVTK----GSKGDLLELYCGNGNFSLALARN------FDRVLATEIAKPSVAAAQY 253 (369)
T ss_dssp EEEETTSCCCSBHHHHHHHHHHHHHHTT----TCCSEEEEESCTTSHHHHHHGGG------SSEEEEECCCHHHHHHHHH
T ss_pred EEECCCCeecCCHHHHHHHHHHHHHHhh----cCCCEEEEccCCCCHHHHHHHhc------CCEEEEEECCHHHHHHHHH
Confidence 44555 46666665 6778888887764 23678999999999999877763 2489999999999999999
Q ss_pred HHHHcCCcc-eEEEcchhhchhhhcC--------------CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHH
Q 025211 89 TLEAHNVHA-DLINTDIASGLEKRLA--------------GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVID 153 (256)
Q Consensus 89 ~~~~~~~~~-~~~~~d~~~~~~~~~~--------------~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
|+..+++++ +++.+|+.+....... .+||+|++|||+..
T Consensus 254 n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g-------------------------- 307 (369)
T 3bt7_A 254 NIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG-------------------------- 307 (369)
T ss_dssp HHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC--------------------------
T ss_pred HHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCccc--------------------------
Confidence 999999865 8999999887543322 37999999999741
Q ss_pred HHHHHHhhccccCeEEEEEEeCC
Q 025211 154 KILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 154 ~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
+...+.+.|+++|++++++++.
T Consensus 308 -~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 308 -LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp -CCHHHHHHHTTSSEEEEEESCH
T ss_pred -cHHHHHHHHhCCCEEEEEECCH
Confidence 1223444566888888877644
No 120
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.66 E-value=1.2e-14 Score=118.33 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=91.7
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
...+++.++..+..+...++.+|||+|||+|.+++.++..++ ++..|+|+|+++.+++.+++++..+ ....++++|
T Consensus 55 ~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~---~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d 130 (227)
T 1g8a_A 55 RSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVG---WEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGD 130 (227)
T ss_dssp TCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECC
T ss_pred chhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhC---CCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEcc
Confidence 355556665544433345788999999999999998887752 4569999999999999999988655 234889999
Q ss_pred hhhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 104 IASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 104 ~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
+.+... ....++||+|++++|.. + ....++..+.++|||||+++++..
T Consensus 131 ~~~~~~~~~~~~~~D~v~~~~~~~---~--------------------~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 131 ATKPEEYRALVPKVDVIFEDVAQP---T--------------------QAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp TTCGGGGTTTCCCEEEEEECCCST---T--------------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcchhhcccCCceEEEECCCCH---h--------------------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 877421 11246899999987721 0 134558999999999999998743
No 121
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.66 E-value=1.6e-15 Score=142.37 Aligned_cols=138 Identities=12% Similarity=0.098 Sum_probs=103.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc---ceEEEcchhhchhhhcCCCccE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH---ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
++++|||+|||+|.+++.++.. + ...|+++|+|+.+++.|++|+..|++. .+++++|+.+.+.. ..++||+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~----g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~-~~~~fD~ 612 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG----G-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE-ANEQFDL 612 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT----T-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH-CCCCEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC----C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh-cCCCccE
Confidence 6899999999999999888764 2 236999999999999999999999986 38999999987544 3578999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 196 (256)
|++|||++..+..... .......+..++..+.++|+|||+++++++..... .-...+.+.|++...+
T Consensus 613 Ii~DPP~f~~~~~~~~----------~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~-~~~~~l~~~g~~~~~i 679 (703)
T 3v97_A 613 IFIDPPTFSNSKRMED----------AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR-MDLDGLAKLGLKAQEI 679 (703)
T ss_dssp EEECCCSBC-----------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC-CCHHHHHHTTEEEEEC
T ss_pred EEECCccccCCccchh----------HHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc-cCHHHHHHcCCceeee
Confidence 9999999764432110 01223457889999999999999999877653322 2256677778764443
No 122
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.66 E-value=3.3e-15 Score=130.75 Aligned_cols=130 Identities=16% Similarity=0.188 Sum_probs=97.6
Q ss_pred CchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC--------------------------------
Q 025211 22 DDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP-------------------------------- 69 (256)
Q Consensus 22 ~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-------------------------------- 69 (256)
+..+.++..++..... .++..|||++||+|.++++++.+.....|
T Consensus 177 pl~e~LAaall~l~~~---~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 253 (384)
T 3ldg_A 177 PIKENMAAAIILLSNW---FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADY 253 (384)
T ss_dssp CCCHHHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHHhCC---CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhc
Confidence 3467788877765432 46789999999999999999987654222
Q ss_pred --CceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCC
Q 025211 70 --GVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGG 145 (256)
Q Consensus 70 --~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~ 145 (256)
...|+|+|+++.+++.|++|+..+++.. +++++|+.+... ..+||+|++||||...-..+
T Consensus 254 ~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~---~~~fD~Iv~NPPYG~rl~~~------------- 317 (384)
T 3ldg_A 254 DIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT---NKINGVLISNPPYGERLLDD------------- 317 (384)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC---CCCSCEEEECCCCTTTTSCH-------------
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc---cCCcCEEEECCchhhccCCH-------------
Confidence 2569999999999999999999999864 899999988643 25899999999997543211
Q ss_pred CCcHHHHHHHHHHHhhcccc--CeEEEEEEe
Q 025211 146 ENGRAVIDKILPSADKLLSK--RGWLYLVTL 174 (256)
Q Consensus 146 ~~~~~~~~~~l~~~~~~Lkp--gG~l~~~~~ 174 (256)
.....+...+.+.||+ ||.+++++.
T Consensus 318 ----~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 318 ----KAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp ----HHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred ----HHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 1234444445555554 999999876
No 123
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.65 E-value=4.1e-15 Score=125.19 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=101.1
Q ss_pred CchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC-CHHHHHHHHHHH-----HHcCC
Q 025211 22 DDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-NPYAVEVTRKTL-----EAHNV 95 (256)
Q Consensus 22 ~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-~~~~i~~a~~~~-----~~~~~ 95 (256)
+.++.+++++..... ..++.+|||+|||+|.+++.+++. + ..+|+|+|+ ++.+++.|++|+ ..+++
T Consensus 62 ~~~~~l~~~l~~~~~---~~~~~~vLDlG~G~G~~~~~~a~~----~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~ 133 (281)
T 3bzb_A 62 SGARALADTLCWQPE---LIAGKTVCELGAGAGLVSIVAFLA----G-ADQVVATDYPDPEILNSLESNIREHTANSCSS 133 (281)
T ss_dssp CHHHHHHHHHHHCGG---GTTTCEEEETTCTTSHHHHHHHHT----T-CSEEEEEECSCHHHHHHHHHHHHTTCC-----
T ss_pred cHHHHHHHHHHhcch---hcCCCeEEEecccccHHHHHHHHc----C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhccc
Confidence 447888888877643 146789999999999999887764 2 238999999 899999999999 44554
Q ss_pred c------ceEEEcchhhchhhh----cCCCccEEEE-CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211 96 H------ADLINTDIASGLEKR----LAGLVDVMVV-NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS 164 (256)
Q Consensus 96 ~------~~~~~~d~~~~~~~~----~~~~fD~Ii~-npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 164 (256)
. ..+...|+.+..... ..++||+|++ +..|+ .+ ....+++.+.++|+
T Consensus 134 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~-~~---------------------~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 134 ETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSF-HQ---------------------AHDALLRSVKMLLA 191 (281)
T ss_dssp -----CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSC-GG---------------------GHHHHHHHHHHHBC
T ss_pred ccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccC-hH---------------------HHHHHHHHHHHHhc
Confidence 3 366655544432221 2578999998 55543 11 15788999999999
Q ss_pred ---c--CeEEEEEEeCCC-----CHHHHHHHHHHcC-CcEEEEE
Q 025211 165 ---K--RGWLYLVTLTAN-----DPSQICLQMMEKG-YAARIVV 197 (256)
Q Consensus 165 ---p--gG~l~~~~~~~~-----~~~~~~~~~~~~g-~~~~~~~ 197 (256)
| ||+++++....+ ....+...+.+.| |....+.
T Consensus 192 ~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 192 LPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp CTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEE
T ss_pred ccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEec
Confidence 9 999887654432 1346677888899 8877664
No 124
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.65 E-value=3.2e-15 Score=126.39 Aligned_cols=133 Identities=11% Similarity=0.129 Sum_probs=95.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceE--EEEeCCHHHHHHHHHHHHHc-CCcc---eEEEcchhhchh----h
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQY--IATDINPYAVEVTRKTLEAH-NVHA---DLINTDIASGLE----K 110 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v--~giD~~~~~i~~a~~~~~~~-~~~~---~~~~~d~~~~~~----~ 110 (256)
.++.+|||+|||+|.++..++..+..+++++.+ +|+|+|++|++.|++++... ++.. .+..+++.+... +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 466899999999998877666555444567755 99999999999999988653 3332 445666654321 1
Q ss_pred hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-------------
Q 025211 111 RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------------- 177 (256)
Q Consensus 111 ~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------- 177 (256)
+.+++||+|++.-.+++.++ ...++.+++++|||||+++++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d---------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 189 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD---------------------IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSR 189 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC---------------------HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGG
T ss_pred cCCCceeEEEEeeeeeecCC---------------------HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHh
Confidence 34678999999766654443 56889999999999999998754321
Q ss_pred ----------CHHHHHHHHHHcCCcEE
Q 025211 178 ----------DPSQICLQMMEKGYAAR 194 (256)
Q Consensus 178 ----------~~~~~~~~~~~~g~~~~ 194 (256)
...++.+++.+.||...
T Consensus 190 ~~~~~~~~~~~~~~~~~~l~~aGf~~~ 216 (292)
T 2aot_A 190 FPQDDLCQYITSDDLTQMLDNLGLKYE 216 (292)
T ss_dssp SCCCTTCCCCCHHHHHHHHHHHTCCEE
T ss_pred ccCCCcccCCCHHHHHHHHHHCCCceE
Confidence 23466777777787654
No 125
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.65 E-value=8.2e-16 Score=126.19 Aligned_cols=131 Identities=15% Similarity=0.242 Sum_probs=93.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH------cCCcc-eEEEcchhhchhh-hc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA------HNVHA-DLINTDIASGLEK-RL 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~------~~~~~-~~~~~d~~~~~~~-~~ 112 (256)
.++.+|||+|||+|.+++.++.. .|++.|+|+|+++.+++.|++++.. .+..+ .++++|+.+.++. +.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~----~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~ 120 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPL----FPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFY 120 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGG----STTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCC
T ss_pred CCCCeEEEEccCCcHHHHHHHHH----CCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCC
Confidence 46789999999999998777765 7888999999999999999988764 34444 8999999875442 34
Q ss_pred CCCccEEEECCC--CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcC
Q 025211 113 AGLVDVMVVNPP--YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKG 190 (256)
Q Consensus 113 ~~~fD~Ii~npP--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 190 (256)
+++||.|+++.| +..... ...+ .....++..+.++|||||++++.+............+...+
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h-------~krr--------~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTK-------HKWR--------IISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp TTCEEEEEEESCC--------------------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred CcCeeEEEEeCCCchhhhhh-------hhhh--------hhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 688999998653 211000 0000 01257899999999999999997754444455666666655
No 126
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.65 E-value=4.7e-15 Score=119.52 Aligned_cols=106 Identities=21% Similarity=0.225 Sum_probs=85.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++....+ ..+++++|+.+.. .+++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~---~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH------CKRLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFS---TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG------EEEEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCC---CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCC---CCCCccEEE
Confidence 56789999999999988776654 3589999999999999999876543 4489999998874 357899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
++..+++.++. .....++..+.++|||||++++.++
T Consensus 120 ~~~~l~~~~~~------------------~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 120 VAEVLYYLEDM------------------TQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EESCGGGSSSH------------------HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EccHHHhCCCH------------------HHHHHHHHHHHHHcCCCCEEEEEec
Confidence 98776654432 1246789999999999999999664
No 127
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.5e-15 Score=128.75 Aligned_cols=119 Identities=18% Similarity=0.135 Sum_probs=93.6
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc---CCcceEE
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH---NVHADLI 100 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~---~~~~~~~ 100 (256)
...+.+.+..... .++.+|||+|||+|.++..+++.+. ++.+|+|+|+++.+++.|++++... ....+++
T Consensus 22 ~~~~~~~l~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~ 94 (299)
T 3g5t_A 22 PSDFYKMIDEYHD----GERKLLVDVGCGPGTATLQMAQELK---PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFK 94 (299)
T ss_dssp CHHHHHHHHHHCC----SCCSEEEEETCTTTHHHHHHHHHSS---CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEE
T ss_pred CHHHHHHHHHHhc----CCCCEEEEECCCCCHHHHHHHHhCC---CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEE
Confidence 3456666666542 4789999999999999988887631 5779999999999999999999876 3344899
Q ss_pred EcchhhchhhhcC------CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 101 NTDIASGLEKRLA------GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 101 ~~d~~~~~~~~~~------~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
++|+.+.. +.. ++||+|+++..+++. + ...+++++.++|+|||++++..
T Consensus 95 ~~d~~~~~--~~~~~~~~~~~fD~V~~~~~l~~~-~---------------------~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 95 ISSSDDFK--FLGADSVDKQKIDMITAVECAHWF-D---------------------FEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp ECCTTCCG--GGCTTTTTSSCEEEEEEESCGGGS-C---------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCHHhCC--ccccccccCCCeeEEeHhhHHHHh-C---------------------HHHHHHHHHHhcCCCcEEEEEe
Confidence 99998753 223 789999997665433 1 5789999999999999998833
No 128
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.65 E-value=7.1e-15 Score=118.87 Aligned_cols=125 Identities=20% Similarity=0.287 Sum_probs=96.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh-h-hcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE-K-RLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~-~-~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..++.. +++++|+|+++.+++.++++ ....+...|+.+... + ....+||+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR------GIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC------CCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccE
Confidence 46799999999999987766654 56899999999999999886 233788888877622 1 22356999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC----------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA---------------------- 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------------- 176 (256)
|+++..+. ..+ ...+++.+.++|||||++++..+..
T Consensus 120 v~~~~~l~-~~~---------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (227)
T 3e8s_A 120 ICANFALL-HQD---------------------IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAG 177 (227)
T ss_dssp EEEESCCC-SSC---------------------CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSS
T ss_pred EEECchhh-hhh---------------------HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhcccc
Confidence 99987776 222 3688999999999999999976421
Q ss_pred ---------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 ---------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 ---------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...+++.+.+.+.||....+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 178 DWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp CCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred CcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 1457899999999999877654
No 129
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=4.3e-15 Score=126.96 Aligned_cols=108 Identities=12% Similarity=0.179 Sum_probs=88.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++.. +++|+|+|+++.+++.|++++...++. .+++.+|+.+. +++||+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~fD~ 158 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-----DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-----AEPVDR 158 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-----CCCCSE
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-----CCCcCE
Confidence 578899999999999988888763 459999999999999999999887764 38889998664 268999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
|+++..+.+.+.. ....+++.+.++|||||++++..+...
T Consensus 159 v~~~~~l~~~~~~-------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 159 IVSIEAFEHFGHE-------------------NYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp EEEESCGGGTCGG-------------------GHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred EEEeChHHhcCHH-------------------HHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 9998665544321 157889999999999999999776443
No 130
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.64 E-value=1.1e-15 Score=127.04 Aligned_cols=114 Identities=16% Similarity=0.075 Sum_probs=87.5
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
...+++++.+.. ..+.+|||+|||+|.++..++.. +.+|+|+|+|+.|++.|+++ ....++++|
T Consensus 26 p~~l~~~l~~~~-----~~~~~vLDvGcGtG~~~~~l~~~------~~~v~gvD~s~~ml~~a~~~-----~~v~~~~~~ 89 (257)
T 4hg2_A 26 PRALFRWLGEVA-----PARGDALDCGCGSGQASLGLAEF------FERVHAVDPGEAQIRQALRH-----PRVTYAVAP 89 (257)
T ss_dssp CHHHHHHHHHHS-----SCSSEEEEESCTTTTTHHHHHTT------CSEEEEEESCHHHHHTCCCC-----TTEEEEECC
T ss_pred HHHHHHHHHHhc-----CCCCCEEEEcCCCCHHHHHHHHh------CCEEEEEeCcHHhhhhhhhc-----CCceeehhh
Confidence 356778777764 35689999999999987766654 35899999999999877542 234889999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
+.+. ++.+++||+|++.-.++..+ ...++.++.++|||||+++++.....
T Consensus 90 ~e~~--~~~~~sfD~v~~~~~~h~~~----------------------~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 90 AEDT--GLPPASVDVAIAAQAMHWFD----------------------LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp TTCC--CCCSSCEEEEEECSCCTTCC----------------------HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hhhh--cccCCcccEEEEeeehhHhh----------------------HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 8776 44578999999976654321 46789999999999999998776443
No 131
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.64 E-value=2.8e-15 Score=131.49 Aligned_cols=129 Identities=19% Similarity=0.249 Sum_probs=96.5
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC----------------------------------
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP---------------------------------- 69 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~---------------------------------- 69 (256)
.+.+++.++..... .++.+|||+|||+|.++++++.+.....|
T Consensus 180 ~e~lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 256 (385)
T 3ldu_A 180 RETLAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNES 256 (385)
T ss_dssp CHHHHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSC
T ss_pred cHHHHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccC
Confidence 57788877776532 46789999999999999999987543222
Q ss_pred CceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCC
Q 025211 70 GVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGEN 147 (256)
Q Consensus 70 ~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~ 147 (256)
...|+|+|+++.+++.|++|+..+++. .++.++|+.+... +.+||+|++||||......
T Consensus 257 ~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~---~~~~D~Iv~NPPyg~rl~~---------------- 317 (385)
T 3ldu_A 257 KFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS---EDEFGFIITNPPYGERLED---------------- 317 (385)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC---SCBSCEEEECCCCCCSHHH----------------
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc---CCCCcEEEECCCCcCccCC----------------
Confidence 257999999999999999999999986 3899999988643 3689999999999743211
Q ss_pred cHHHHHHHHHHHhhcccc--CeEEEEEEeC
Q 025211 148 GRAVIDKILPSADKLLSK--RGWLYLVTLT 175 (256)
Q Consensus 148 ~~~~~~~~l~~~~~~Lkp--gG~l~~~~~~ 175 (256)
......+...+.+.|++ ||.+++++..
T Consensus 318 -~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 318 -KDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp -HHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred -HHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 11234445555555555 8999887753
No 132
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.64 E-value=2.8e-15 Score=136.82 Aligned_cols=161 Identities=10% Similarity=0.124 Sum_probs=112.9
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC--------------CceEEEEeCCH
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP--------------GVQYIATDINP 80 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~--------------~~~v~giD~~~ 80 (256)
..+|+|+....++++.+ . +.++.+|||+|||+|.+++.++..+.+... ...++|+|+++
T Consensus 149 G~fyTP~~iv~~mv~~l----~---p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~ 221 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLL----K---PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVP 221 (541)
T ss_dssp -CCCCCHHHHHHHHHHH----C---CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCH
T ss_pred CeeeCCHHHHHHHHHHh----c---cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCH
Confidence 34889966555555433 2 246789999999999999999887654331 24799999999
Q ss_pred HHHHHHHHHHHHcCCc------ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHH
Q 025211 81 YAVEVTRKTLEAHNVH------ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDK 154 (256)
Q Consensus 81 ~~i~~a~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.+++.|+.|+..+++. ..+.++|...... ....+||+|++||||.......... .+. ...+ .....
T Consensus 222 ~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~-~~~~~fD~Vv~NPPf~~~~~~~~~~-----~~~-~~~~-~~~~~ 293 (541)
T 2ar0_A 222 GTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDG-ENLPKAHIVATNPPFGSAAGTNITR-----TFV-HPTS-NKQLC 293 (541)
T ss_dssp HHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHH-HTSCCEEEEEECCCCTTCSSCCCCS-----CCS-SCCS-CHHHH
T ss_pred HHHHHHHHHHHHhCCCccccccCCeEeCCCccccc-ccccCCeEEEECCCcccccchhhHh-----hcC-CCCC-chHHH
Confidence 9999999999988876 4789999776432 2246899999999998765533100 010 0111 11347
Q ss_pred HHHHHhhccccCeEEEEEEeCC---C--CHHHHHHHHHHcC
Q 025211 155 ILPSADKLLSKRGWLYLVTLTA---N--DPSQICLQMMEKG 190 (256)
Q Consensus 155 ~l~~~~~~LkpgG~l~~~~~~~---~--~~~~~~~~~~~~g 190 (256)
++..+.++|+|||++.++.+.. . ....+++.+.+.+
T Consensus 294 Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~ 334 (541)
T 2ar0_A 294 FMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC 334 (541)
T ss_dssp HHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE
T ss_pred HHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHHhhcC
Confidence 8899999999999999988743 1 2345777776654
No 133
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.64 E-value=2.1e-15 Score=125.34 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=79.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.|+++.. ...++++|+.+... +++||+|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~---~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS------FGTVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSL---GRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT------SSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCC---SCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCc---cCCcCEEEE
Confidence 5689999999999987666554 3589999999999999998753 34899999987532 578999999
Q ss_pred CC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 122 NP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 122 np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
+. .+.+..+ ......+++.+.++|||||++++.
T Consensus 117 ~~~~l~~~~~------------------~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAG------------------QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCH------------------HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCchhhhcCC------------------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 76 5543322 123578899999999999999984
No 134
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.64 E-value=2.7e-15 Score=122.75 Aligned_cols=102 Identities=14% Similarity=0.239 Sum_probs=86.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
++.+|||+|||+|..++.++.. .++.+|+++|+++.+++.|++++...++. .+++.+|+.+..+...+++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASI----SDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTT----CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEE
Confidence 6789999999999998888774 56789999999999999999999998875 39999999887651235789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
+++.+.. .+..+++.+.++|+|||++++
T Consensus 147 ~~~~~~~------------------------~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 147 FIDAAKA------------------------QSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EEETTSS------------------------SHHHHHHHHGGGEEEEEEEEE
T ss_pred EEcCcHH------------------------HHHHHHHHHHHhcCCCeEEEE
Confidence 9975421 156789999999999999987
No 135
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.64 E-value=3.2e-15 Score=131.40 Aligned_cols=130 Identities=20% Similarity=0.247 Sum_probs=96.3
Q ss_pred CchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC--------------------------------
Q 025211 22 DDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP-------------------------------- 69 (256)
Q Consensus 22 ~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-------------------------------- 69 (256)
+..+.++..++..... .++..|||+|||+|.++++++.+.....|
T Consensus 184 pl~e~lAa~ll~l~~~---~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 260 (393)
T 3k0b_A 184 PIKETMAAALVLLTSW---HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANY 260 (393)
T ss_dssp SCCHHHHHHHHHHSCC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHHhCC---CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcc
Confidence 3467788877766432 46789999999999999999987654222
Q ss_pred --CceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCC
Q 025211 70 --GVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGG 145 (256)
Q Consensus 70 --~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~ 145 (256)
...|+|+|+++.+++.|++|+..+++. .+++++|+.+... +.+||+|++||||.......
T Consensus 261 ~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~---~~~fD~Iv~NPPYg~rl~~~------------- 324 (393)
T 3k0b_A 261 DQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT---EDEYGVVVANPPYGERLEDE------------- 324 (393)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC---CCCSCEEEECCCCCCSHHHH-------------
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC---CCCCCEEEECCCCccccCCc-------------
Confidence 256999999999999999999999986 3899999988643 35899999999997432110
Q ss_pred CCcHHHHHHHHHHHhhcccc--CeEEEEEEe
Q 025211 146 ENGRAVIDKILPSADKLLSK--RGWLYLVTL 174 (256)
Q Consensus 146 ~~~~~~~~~~l~~~~~~Lkp--gG~l~~~~~ 174 (256)
..+..+...+.+.||+ ||.+++++.
T Consensus 325 ----~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 325 ----EAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp ----HHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred ----hhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 1133344444444544 999999775
No 136
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=9.3e-15 Score=115.31 Aligned_cols=129 Identities=13% Similarity=0.154 Sum_probs=100.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++.. ...++.+|+.+.. ..+++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~~--~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ------GHDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQ--ISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTSC--CCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC------CCcEEEEcCCHHHHHHHHHhCC----CCcEEEcccccCC--CCCCceeEEE
Confidence 47889999999999998877764 4589999999999999988752 2488899987752 2357899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC--CHHHHHHHHHHcCCcEEEEEe
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~ 198 (256)
++++..+... ......++..+.++|+|||++++..+... ...++.+.+.+.||.......
T Consensus 113 ~~~~~~~~~~------------------~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 113 SAGNVMGFLA------------------EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp ECCCCGGGSC------------------HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEES
T ss_pred ECCcHHhhcC------------------hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeec
Confidence 9865432211 11257889999999999999999776543 567889999999999877654
Q ss_pred c
Q 025211 199 R 199 (256)
Q Consensus 199 ~ 199 (256)
.
T Consensus 175 ~ 175 (195)
T 3cgg_A 175 S 175 (195)
T ss_dssp S
T ss_pred c
Confidence 4
No 137
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.64 E-value=2.3e-14 Score=128.85 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=114.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
++.+|||+|||+|..++.++..+. +++.|+|+|+++.+++.+++|+.++++.+ .++++|+.+... ..+++||.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~---~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN---NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-AVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT---TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH-HSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh-hccccCCEEE
Confidence 789999999999999999998753 34699999999999999999999999865 889999877532 1357899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCC----CcHHHHHHHHHHHhhccccCeEEEEEEeCCC---CHHHHHHHHHHcC-Cc
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGE----NGRAVIDKILPSADKLLSKRGWLYLVTLTAN---DPSQICLQMMEKG-YA 192 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~~~~g-~~ 192 (256)
+|||+.....- .+.+...+.-.. .-......++..+.++|||||++++++++.. ....+...+.+++ +.
T Consensus 193 ~D~PcSg~G~~---~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~ 269 (479)
T 2frx_A 193 LDAPCSGEGVV---RKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAV 269 (479)
T ss_dssp EECCCCCGGGG---GTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTE
T ss_pred ECCCcCCcccc---cCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCce
Confidence 99998643211 111111100000 0012346789999999999999999887653 2334555566654 21
Q ss_pred E--------------------EEEEecCCCCccEEEEEEEecCc
Q 025211 193 A--------------------RIVVQRSTEEENLHIIKFWRDFD 216 (256)
Q Consensus 193 ~--------------------~~~~~~~~~~~~~~l~~~~~~~~ 216 (256)
. ..+++.....+.+++..++|...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~g~~r~~P~~~~~dGfF~A~l~k~~~ 313 (479)
T 2frx_A 270 EFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQA 313 (479)
T ss_dssp EECCCTTSSTTGGGGBCTTSCEEECTTTTTSCCEEEEEEEECSC
T ss_pred ecccccccccccccccccCCeEEECCCCCCcCccEEEEEEEcCC
Confidence 1 22334444556677777777553
No 138
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.64 E-value=1.5e-14 Score=118.36 Aligned_cols=115 Identities=20% Similarity=0.209 Sum_probs=87.9
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+.+.+...+ .++.+|||+|||+|.++..++.. .+++|+|+++.+++.|+++...++...+++.+|+
T Consensus 21 ~~~~~~~~~~~-----~~~~~vLdiG~G~G~~~~~l~~~-------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 88 (243)
T 3d2l_A 21 PEWVAWVLEQV-----EPGKRIADIGCGTGTATLLLADH-------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDM 88 (243)
T ss_dssp HHHHHHHHHHS-----CTTCEEEEESCTTCHHHHHHTTT-------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCG
T ss_pred HHHHHHHHHHc-----CCCCeEEEecCCCCHHHHHHhhC-------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcCh
Confidence 45566666664 35689999999999987655432 5899999999999999999987776668999998
Q ss_pred hhchhhhcCCCccEEEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 105 ASGLEKRLAGLVDVMVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
.+... +++||+|+++. ++.+... ......+++.+.++|+|||++++.
T Consensus 89 ~~~~~---~~~fD~v~~~~~~~~~~~~------------------~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 89 RELEL---PEPVDAITILCDSLNYLQT------------------EADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCC---SSCEEEEEECTTGGGGCCS------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC---CCCcCEEEEeCCchhhcCC------------------HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 77532 37899999975 3332211 123678899999999999999874
No 139
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.64 E-value=4.7e-15 Score=121.48 Aligned_cols=128 Identities=12% Similarity=0.131 Sum_probs=97.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +. .+++|+|+++.+++.++++.... ..+++.+|+.+.. ..+++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~----~~-~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~--~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH----GA-SYVLGLDLSEKMLARARAAGPDT--GITYERADLDKLH--LPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT----TC-SEEEEEESCHHHHHHHHHTSCSS--SEEEEECCGGGCC--CCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC----CC-CeEEEEcCCHHHHHHHHHhcccC--CceEEEcChhhcc--CCCCCceEEE
Confidence 47789999999999998777664 22 28999999999999998875432 3488899987753 3357899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC------------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA------------------------ 176 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------ 176 (256)
++.++.+.++ ...+++.+.++|+|||++++..+..
T Consensus 113 ~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (243)
T 3bkw_A 113 SSLALHYVED---------------------VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDR 171 (243)
T ss_dssp EESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECC
T ss_pred Eeccccccch---------------------HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecc
Confidence 9876554322 5688999999999999999865310
Q ss_pred --------------------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 --------------------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 --------------------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
....++.+.+.+.||..+.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 172 YLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp TTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 1356788889999998766653
No 140
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.64 E-value=5.4e-15 Score=121.30 Aligned_cols=80 Identities=24% Similarity=0.346 Sum_probs=69.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
++.+|||+|||+|.+++.++.. +..|+|+|+++.+++.|++++..+++. .+++++|+.+... +++||+|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~D~v 148 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS---FLKADVV 148 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG---GCCCSEE
T ss_pred CCCEEEECccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc---cCCCCEE
Confidence 6899999999999999888875 369999999999999999999999973 4999999988752 4789999
Q ss_pred EECCCCCCCCC
Q 025211 120 VVNPPYVPTPE 130 (256)
Q Consensus 120 i~npP~~~~~~ 130 (256)
+++|||.....
T Consensus 149 ~~~~~~~~~~~ 159 (241)
T 3gdh_A 149 FLSPPWGGPDY 159 (241)
T ss_dssp EECCCCSSGGG
T ss_pred EECCCcCCcch
Confidence 99999986544
No 141
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=6.8e-15 Score=121.73 Aligned_cols=115 Identities=17% Similarity=0.125 Sum_probs=90.0
Q ss_pred HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA 105 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~ 105 (256)
..+..++..+. ..++.+|||+|||+|.++..++.. .|+.+++|+|+++.+++.++++ .....++.+|+.
T Consensus 20 ~~~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~----~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~ 88 (259)
T 2p35_A 20 RPARDLLAQVP---LERVLNGYDLGCGPGNSTELLTDR----YGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLA 88 (259)
T ss_dssp HHHHHHHTTCC---CSCCSSEEEETCTTTHHHHHHHHH----HCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTT
T ss_pred HHHHHHHHhcC---CCCCCEEEEecCcCCHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChh
Confidence 33444555443 357789999999999999888877 4677999999999999999887 223489999988
Q ss_pred hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+.. .+++||+|+++..+++.++ ...++.++.++|+|||++++..+.
T Consensus 89 ~~~---~~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 89 TWK---PAQKADLLYANAVFQWVPD---------------------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp TCC---CSSCEEEEEEESCGGGSTT---------------------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hcC---ccCCcCEEEEeCchhhCCC---------------------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 754 3578999999876654332 568899999999999999997753
No 142
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.63 E-value=1.1e-14 Score=123.84 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=98.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-----CCcceEEEcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-----NVHADLINTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~ 115 (256)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... ....+++.+|+.+......+++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH----GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTC
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC----CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCc
Confidence 46789999999999988777654 45679999999999999999987431 1224899999988754223578
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----CHHHHHHHHHHcCC
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----DPSQICLQMMEKGY 191 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~~~~~~~~~~~g~ 191 (256)
||+|+++++....+... + ....+++.+.++|||||++++...... ....+.+.+++.||
T Consensus 170 fDvIi~d~~~~~~~~~~---------l--------~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF 232 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASK---------L--------FGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGF 232 (304)
T ss_dssp EEEEEEECC--------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTC
T ss_pred eeEEEECCCCccccchh---------h--------hHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCC
Confidence 99999988753211100 0 015789999999999999998654321 23467778888899
Q ss_pred cEEEEEec
Q 025211 192 AARIVVQR 199 (256)
Q Consensus 192 ~~~~~~~~ 199 (256)
.....+..
T Consensus 233 ~~v~~~~~ 240 (304)
T 3bwc_A 233 ASVQYALM 240 (304)
T ss_dssp SEEEEEEC
T ss_pred CcEEEEEe
Confidence 87665543
No 143
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.63 E-value=4e-15 Score=118.73 Aligned_cols=124 Identities=14% Similarity=0.124 Sum_probs=95.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++ +|||+|||+|.++..++.. +.+++|+|+++.+++.|+++....+....++.+|+.+.. +.+++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD--IVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS--CCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC--CCcCCccEEEE
Confidence 45 9999999999987766653 459999999999999999999887776689999987762 33578999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC----------------CHHHHHHH
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----------------DPSQICLQ 185 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------~~~~~~~~ 185 (256)
+..+. + ......++..+.++|+|||++++...... ..+++.+.
T Consensus 101 ~~~~~--~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (202)
T 2kw5_A 101 IFCHL--P-------------------SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSE 159 (202)
T ss_dssp ECCCC--C-------------------HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHH
T ss_pred EhhcC--C-------------------HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHH
Confidence 64322 1 12367889999999999999999864321 34566666
Q ss_pred HHHcCCcEEEEE
Q 025211 186 MMEKGYAARIVV 197 (256)
Q Consensus 186 ~~~~g~~~~~~~ 197 (256)
+. ||+...+.
T Consensus 160 l~--Gf~v~~~~ 169 (202)
T 2kw5_A 160 LP--SLNWLIAN 169 (202)
T ss_dssp CS--SSCEEEEE
T ss_pred hc--CceEEEEE
Confidence 66 88765543
No 144
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.63 E-value=3.2e-15 Score=121.36 Aligned_cols=104 Identities=16% Similarity=0.246 Sum_probs=86.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcC----C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLA----G 114 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~----~ 114 (256)
++.+|||+|||+|..++.++.. .+ +++|+++|+++.+++.|++++...++. .+++++|+.+..+.... +
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLA----LPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTT----CCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred CCCEEEEeCCcchHHHHHHHHh----CCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCC
Confidence 6789999999999998888776 34 679999999999999999999998876 38999999877554322 7
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+||+|+++++. .....+++.+.++|+|||++++..
T Consensus 140 ~fD~v~~~~~~------------------------~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 140 QYDLIYIDADK------------------------ANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp CEEEEEECSCG------------------------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCH------------------------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 89999998652 115678999999999999999844
No 145
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.63 E-value=4.3e-15 Score=124.62 Aligned_cols=125 Identities=22% Similarity=0.220 Sum_probs=98.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-C--Cc-ceEEEcchhhchhhhcCCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-N--VH-ADLINTDIASGLEKRLAGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-~--~~-~~~~~~d~~~~~~~~~~~~f 116 (256)
.++.+|||+|||+|.++..++..+ .++.+++++|+++.+++.|++++..+ + .. .+++.+|+.+.. +.+++|
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~--~~~~~~ 172 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAV---GPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE--LPDGSV 172 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH---CTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC--CCTTCE
T ss_pred CCCCEEEEEcccccHHHHHHHHHh---CCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC--CCCCce
Confidence 578899999999999999888854 45679999999999999999999887 5 33 389999987762 235689
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHH-cCCcEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMME-KGYAARI 195 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~g~~~~~ 195 (256)
|+|++++|- ...++..+.++|+|||++++..+......++...+.+ .+|....
T Consensus 173 D~v~~~~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 173 DRAVLDMLA--------------------------PWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp EEEEEESSC--------------------------GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCE
T ss_pred eEEEECCcC--------------------------HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcE
Confidence 999998662 2366899999999999999988765555566666766 6676443
Q ss_pred E
Q 025211 196 V 196 (256)
Q Consensus 196 ~ 196 (256)
.
T Consensus 227 ~ 227 (280)
T 1i9g_A 227 A 227 (280)
T ss_dssp E
T ss_pred E
Confidence 3
No 146
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.63 E-value=1e-14 Score=118.28 Aligned_cols=104 Identities=14% Similarity=0.103 Sum_probs=85.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhc---CCC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRL---AGL 115 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~---~~~ 115 (256)
++.+|||+|||+|..++.++.. .+ +++|+++|+++.+++.|++++...++.. +++.+|+.+...... .++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARG----LSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTT----CCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred CCCEEEEecCCccHHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 6799999999999998888776 44 6799999999999999999999888753 899999987654432 257
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
||+|+++++.. ....+++.+.++|+|||++++..
T Consensus 134 fD~v~~d~~~~------------------------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 134 FDFIFIDADKQ------------------------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CSEEEECSCGG------------------------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred cCEEEEcCCcH------------------------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999986521 15688999999999999888743
No 147
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.63 E-value=4.5e-15 Score=122.44 Aligned_cols=131 Identities=15% Similarity=0.211 Sum_probs=95.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--------CCcc-eEEEcchhhchhh-h
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--------NVHA-DLINTDIASGLEK-R 111 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--------~~~~-~~~~~d~~~~~~~-~ 111 (256)
++.+|||+|||+|.+++.++.. ++++.|+|+|+++.+++.+++++..+ ++.+ .++.+|+.+.++. +
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~----~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPA----FPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHH----STTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh----CCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhc
Confidence 6789999999999999998887 67789999999999999999998876 6654 8999999875543 3
Q ss_pred cCCCccEEEECCC--CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHc
Q 025211 112 LAGLVDVMVVNPP--YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEK 189 (256)
Q Consensus 112 ~~~~fD~Ii~npP--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 189 (256)
..+++|.|+.+.| +...... ..+. ....++..+.++|+|||++++.+......+.+...+...
T Consensus 125 ~~~~~d~v~~~~p~p~~k~~~~-------~~r~--------~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 189 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDPHFKQRKH-------KARI--------ITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEH 189 (246)
T ss_dssp CTTCEEEEEEESCCCC-------------CSSC--------CCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHS
T ss_pred cccccCEEEEECCCcccccchh-------HHhh--------ccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhC
Confidence 4578999987543 2111000 0000 125789999999999999999664333334555566666
Q ss_pred CC
Q 025211 190 GY 191 (256)
Q Consensus 190 g~ 191 (256)
++
T Consensus 190 ~~ 191 (246)
T 2vdv_E 190 PL 191 (246)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 148
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=2.6e-15 Score=120.58 Aligned_cols=168 Identities=14% Similarity=0.137 Sum_probs=106.6
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+.+.+...+ .++.+|||+|||+|.++..+++. ++. .++|+|+++.+++.++++... .....++.+|+
T Consensus 30 ~~~~~~l~~~~-----~~~~~vLdiGcG~G~~~~~l~~~----~~~-~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~ 98 (215)
T 2pxx_A 30 SSFRALLEPEL-----RPEDRILVLGCGNSALSYELFLG----GFP-NVTSVDYSSVVVAAMQACYAH-VPQLRWETMDV 98 (215)
T ss_dssp HHHHHHHGGGC-----CTTCCEEEETCTTCSHHHHHHHT----TCC-CEEEEESCHHHHHHHHHHTTT-CTTCEEEECCT
T ss_pred HHHHHHHHHhc-----CCCCeEEEECCCCcHHHHHHHHc----CCC-cEEEEeCCHHHHHHHHHhccc-CCCcEEEEcch
Confidence 34445554443 46789999999999998877765 333 899999999999999998753 12348899998
Q ss_pred hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHH
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICL 184 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 184 (256)
.+. ++.+++||+|++++++....... ...|............++..+.++|+|||+++++.+.. ......
T Consensus 99 ~~~--~~~~~~fD~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~--~~~~~~ 168 (215)
T 2pxx_A 99 RKL--DFPSASFDVVLEKGTLDALLAGE------RDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA--PHFRTR 168 (215)
T ss_dssp TSC--CSCSSCEEEEEEESHHHHHTTTC------SCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC--HHHHHH
T ss_pred hcC--CCCCCcccEEEECcchhhhcccc------ccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC--cHHHHH
Confidence 775 33457899999987763221100 00000000112346789999999999999999977533 344555
Q ss_pred HHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 185 QMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 185 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
.+...++.+...........+++++...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (215)
T 2pxx_A 169 HYAQAYYGWSLRHATYGSGFHFHLYLMHK 197 (215)
T ss_dssp HHCCGGGCEEEEEEEESGGGCEEEEEEEE
T ss_pred HHhccccCcEEEEEEecCcceEEEEEEEe
Confidence 66555554333222223333444444433
No 149
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.63 E-value=1.8e-15 Score=124.47 Aligned_cols=144 Identities=14% Similarity=0.088 Sum_probs=106.9
Q ss_pred CCccccCCchHHHHHHHHHhhc-------------ccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH
Q 025211 15 PEVYEPCDDSFALVDALLADRI-------------NLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY 81 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~-------------~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~ 81 (256)
+.++.|+++...+.+....... .+...++.+|||+|||+|.+++.+++. +.+++++|+++.
T Consensus 51 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~------~~~v~~vD~~~~ 124 (248)
T 2yvl_A 51 NGFEVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV------AGEVWTFEAVEE 124 (248)
T ss_dssp TTEEEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHH
T ss_pred EEEEEeCCCHHHHHHhcCcCCCCcccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh------CCEEEEEecCHH
Confidence 5678888887777754433221 011247889999999999998888776 458999999999
Q ss_pred HHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHH
Q 025211 82 AVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSA 159 (256)
Q Consensus 82 ~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (256)
+++.|+++...+++. .++..+|+.+... .+++||+|++++|- ...+++.+
T Consensus 125 ~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~D~v~~~~~~--------------------------~~~~l~~~ 176 (248)
T 2yvl_A 125 FYKTAQKNLKKFNLGKNVKFFNVDFKDAEV--PEGIFHAAFVDVRE--------------------------PWHYLEKV 176 (248)
T ss_dssp HHHHHHHHHHHTTCCTTEEEECSCTTTSCC--CTTCBSEEEECSSC--------------------------GGGGHHHH
T ss_pred HHHHHHHHHHHcCCCCcEEEEEcChhhccc--CCCcccEEEECCcC--------------------------HHHHHHHH
Confidence 999999999888863 3888899877531 23689999998762 23568888
Q ss_pred hhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcE
Q 025211 160 DKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAA 193 (256)
Q Consensus 160 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~ 193 (256)
.++|+|||++++..+......++...+.+. |..
T Consensus 177 ~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~~ 209 (248)
T 2yvl_A 177 HKSLMEGAPVGFLLPTANQVIKLLESIENY-FGN 209 (248)
T ss_dssp HHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EEE
T ss_pred HHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCc
Confidence 999999999999887554445555555554 543
No 150
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.63 E-value=1e-15 Score=125.41 Aligned_cols=130 Identities=16% Similarity=0.092 Sum_probs=94.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. ...+|+|+|+++.+++.|+++....+....++++|+.+...++.+++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA-----PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS-----CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhc-----CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEE
Confidence 47889999999999988776543 2348999999999999999988777755689999998875555668999999
Q ss_pred EC-CCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------C-----HHHHHHH
Q 025211 121 VN-PPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------D-----PSQICLQ 185 (256)
Q Consensus 121 ~n-pP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~-----~~~~~~~ 185 (256)
++ .+. ..... .......++.++.++|||||+++++..... . .+.....
T Consensus 134 ~d~~~~-~~~~~----------------~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (236)
T 1zx0_A 134 YDTYPL-SEETW----------------HTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPA 196 (236)
T ss_dssp ECCCCC-BGGGT----------------TTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHH
T ss_pred ECCccc-chhhh----------------hhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHH
Confidence 94 221 00000 012356789999999999999998543210 0 1234556
Q ss_pred HHHcCCc
Q 025211 186 MMEKGYA 192 (256)
Q Consensus 186 ~~~~g~~ 192 (256)
+.+.||.
T Consensus 197 l~~aGF~ 203 (236)
T 1zx0_A 197 LLEAGFR 203 (236)
T ss_dssp HHHTTCC
T ss_pred HHHCCCC
Confidence 7788887
No 151
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.63 E-value=7e-15 Score=114.09 Aligned_cols=134 Identities=11% Similarity=0.195 Sum_probs=98.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..+++. + .+++|+|+++.+++.++++ ....++..+| .++.+++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~----~--~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d-----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEF----A--TKLYCIDINVIALKEVKEK----FDSVITLSDP-----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTT----E--EEEEEECSCHHHHHHHHHH----CTTSEEESSG-----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhh----c--CeEEEEeCCHHHHHHHHHh----CCCcEEEeCC-----CCCCCCceEEEE
Confidence 57789999999999988777665 2 3899999999999999887 2234888888 233457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------------CHHHHHHHHHH
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------------DPSQICLQMME 188 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------~~~~~~~~~~~ 188 (256)
++..+.+.++ ...+++++.++|||||++++...... ..+++.+.+.
T Consensus 81 ~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 138 (170)
T 3i9f_A 81 FANSFHDMDD---------------------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS- 138 (170)
T ss_dssp EESCSTTCSC---------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-
T ss_pred EccchhcccC---------------------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-
Confidence 9887765533 46889999999999999999765332 2456777776
Q ss_pred cCCcEEEEEecCCCCccEEEEEEEecC
Q 025211 189 KGYAARIVVQRSTEEENLHIIKFWRDF 215 (256)
Q Consensus 189 ~g~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (256)
||+........ ...+.+.+.+..
T Consensus 139 -Gf~~~~~~~~~---~~~~~l~~~~~~ 161 (170)
T 3i9f_A 139 -NFVVEKRFNPT---PYHFGLVLKRKT 161 (170)
T ss_dssp -TEEEEEEECSS---TTEEEEEEEECC
T ss_pred -CcEEEEccCCC---CceEEEEEecCC
Confidence 88876655432 233455555544
No 152
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=2e-14 Score=118.76 Aligned_cols=106 Identities=16% Similarity=0.150 Sum_probs=86.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhc-CCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRL-AGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~-~~~f 116 (256)
.++.+|||+|||+|..++.++.. .+ +++|+++|+++.+++.|++++...++. .+++.+|+.+.++... .++|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARE----LPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTT----SCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred cCCCEEEEecCCchHHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 36799999999999998888776 34 679999999999999999999998876 3899999988655432 2489
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
|+|+++.+. .....+++.+.++|||||++++...
T Consensus 138 D~V~~d~~~------------------------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 138 DLIFIDADK------------------------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp SEEEECSCG------------------------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEEECCch------------------------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 999997541 1156789999999999999988543
No 153
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.62 E-value=5.2e-15 Score=124.86 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=86.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..++.. +...++|+|+++.+++.|++++...+.. ..++++|+.+.... .+++||+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~ 136 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-----GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-LGKEFDV 136 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-----TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-CSSCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-----CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-CCCCcCE
Confidence 57899999999999988776664 2348999999999999999999877663 38899998875221 3578999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
|+++..+++.. ........++..+.++|||||++++..+.
T Consensus 137 v~~~~~l~~~~-----------------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 137 ISSQFSFHYAF-----------------STSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEEESCGGGGG-----------------SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEECchhhhhc-----------------CCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99975543200 01223678999999999999999997753
No 154
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.62 E-value=7.3e-15 Score=121.40 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=85.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhc-----CC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRL-----AG 114 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~-----~~ 114 (256)
++++|||+|||+|..++.+++.+. ++++|+++|+++.+++.|++++...++. .+++.+|+.+.++... .+
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~---~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIP---EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSC---TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 578999999999999999988742 2679999999999999999999998874 3899999987654331 57
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
+||+|+++.+.. .+..+++.+.++|+|||++++.
T Consensus 156 ~fD~V~~d~~~~------------------------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 156 SYDFIFVDADKD------------------------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp CBSEEEECSCST------------------------THHHHHHHHHHHBCTTCCEEEE
T ss_pred CEEEEEEcCchH------------------------HHHHHHHHHHHhCCCCeEEEEe
Confidence 899999975410 1568899999999999999873
No 155
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.62 E-value=2e-14 Score=125.51 Aligned_cols=147 Identities=15% Similarity=0.176 Sum_probs=110.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.|++++...++. .+++.+|+.+..+ ..||+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~D~ 251 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALR----APHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP----VTADV 251 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS----CCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHH----CCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC----CCCCE
Confidence 46789999999999998888877 67889999999 99999999999888875 4899999876432 34999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe--CC--------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL--TA-------------------- 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~-------------------- 176 (256)
|+++..+++.++. ....+++++.++|+|||+++++.. ..
T Consensus 252 v~~~~vl~~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (374)
T 1qzz_A 252 VLLSFVLLNWSDE-------------------DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFM 312 (374)
T ss_dssp EEEESCGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCHH-------------------HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhC
Confidence 9997766543321 135889999999999999998665 21
Q ss_pred ----CCHHHHHHHHHHcCCcEEEEEecCCCC--ccEEEEEEEecC
Q 025211 177 ----NDPSQICLQMMEKGYAARIVVQRSTEE--ENLHIIKFWRDF 215 (256)
Q Consensus 177 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~l~~~~~~~ 215 (256)
...+++.+++.+.||....+....... ....++++.+..
T Consensus 313 ~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 313 GGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp SCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEECC
T ss_pred CCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEECc
Confidence 145577888889999887766543211 112566666643
No 156
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.61 E-value=6.5e-15 Score=126.98 Aligned_cols=120 Identities=16% Similarity=0.143 Sum_probs=88.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-------C-----cceEEEcchhhch
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-------V-----HADLINTDIASGL 108 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-------~-----~~~~~~~d~~~~~ 108 (256)
.++.+|||+|||+|.+++.++..+ ++...|+|+|+++.+++.|++++...+ + ..+++.+|+.+..
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~---g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAV---GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH---CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHh---CCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 578999999999999999888864 355699999999999999999988532 1 3489999998764
Q ss_pred hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHH
Q 025211 109 EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMME 188 (256)
Q Consensus 109 ~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 188 (256)
.++.+++||+|++++|.. ..++..+.++|+|||++++..+......+..+.+.+
T Consensus 181 ~~~~~~~fD~V~~~~~~~--------------------------~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 181 EDIKSLTFDAVALDMLNP--------------------------HVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp -------EEEEEECSSST--------------------------TTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred cccCCCCeeEEEECCCCH--------------------------HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 344456899999987521 235889999999999999877644444455555555
Q ss_pred c
Q 025211 189 K 189 (256)
Q Consensus 189 ~ 189 (256)
.
T Consensus 235 ~ 235 (336)
T 2b25_A 235 C 235 (336)
T ss_dssp H
T ss_pred c
Confidence 3
No 157
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.61 E-value=5.3e-14 Score=122.86 Aligned_cols=142 Identities=13% Similarity=0.235 Sum_probs=108.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.|++++...++. .+++.+|+.+.. +..||+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----p~~~D~ 271 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDA----FPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI----PDGADV 271 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC----CSSCSE
T ss_pred ccCcEEEEeCCCccHHHHHHHHH----CCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC----CCCceE
Confidence 46789999999999998888877 78889999999 99999999999888764 389999988432 237999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------------- 177 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------------- 177 (256)
|++.-.++..++. ....+++++.+.|+|||+++++.....
T Consensus 272 v~~~~vlh~~~d~-------------------~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~ 332 (369)
T 3gwz_A 272 YLIKHVLHDWDDD-------------------DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGA 332 (369)
T ss_dssp EEEESCGGGSCHH-------------------HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCC
T ss_pred EEhhhhhccCCHH-------------------HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCc
Confidence 9997665443322 145789999999999999999764322
Q ss_pred --CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEE
Q 025211 178 --DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFW 212 (256)
Q Consensus 178 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~ 212 (256)
..+++.+++++.||+...+...... ...+++..
T Consensus 333 ~~t~~e~~~ll~~aGf~~~~~~~~~~~--~~svie~~ 367 (369)
T 3gwz_A 333 ERSESEFAALLEKSGLRVERSLPCGAG--PVRIVEIR 367 (369)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEECSSS--SEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEEECCCC--CcEEEEEE
Confidence 2457788888899998877663222 23455544
No 158
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.61 E-value=7.2e-15 Score=128.06 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=93.5
Q ss_pred cCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH--
Q 025211 14 HPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE-- 91 (256)
Q Consensus 14 ~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~-- 91 (256)
.+.+|-+.. ..++..++..+. ..++.+|||+|||+|.+++.++.. .+...++|||+++.+++.|++++.
T Consensus 150 s~~vYGEt~--~~~i~~il~~l~---l~~gd~VLDLGCGtG~l~l~lA~~----~g~~kVvGIDiS~~~lelAr~n~e~f 220 (438)
T 3uwp_A 150 SPEVYGETS--FDLVAQMIDEIK---MTDDDLFVDLGSGVGQVVLQVAAA----TNCKHHYGVEKADIPAKYAETMDREF 220 (438)
T ss_dssp CGGGGGGTH--HHHHHHHHHHHC---CCTTCEEEEESCTTSHHHHHHHHH----CCCSEEEEEECCHHHHHHHHHHHHHH
T ss_pred CCcccCCCC--HHHHHHHHHhcC---CCCCCEEEEeCCCCCHHHHHHHHH----CCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 344555553 444555666553 368899999999999999988876 333369999999999999988653
Q ss_pred -----HcCC---cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcc
Q 025211 92 -----AHNV---HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLL 163 (256)
Q Consensus 92 -----~~~~---~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 163 (256)
.+++ ..+++++|+.+......-..||+|++|++|+. + .....|.++.+.|
T Consensus 221 rkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~-p---------------------dl~~aL~Ei~RvL 278 (438)
T 3uwp_A 221 RKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFG-P---------------------EVDHQLKERFANM 278 (438)
T ss_dssp HHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCC-H---------------------HHHHHHHHHHTTS
T ss_pred HHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccccC-c---------------------hHHHHHHHHHHcC
Confidence 3454 24899999987632210147999999988752 1 1456678889999
Q ss_pred ccCeEEEEEE
Q 025211 164 SKRGWLYLVT 173 (256)
Q Consensus 164 kpgG~l~~~~ 173 (256)
||||++++..
T Consensus 279 KPGGrIVssE 288 (438)
T 3uwp_A 279 KEGGRIVSSK 288 (438)
T ss_dssp CTTCEEEESS
T ss_pred CCCcEEEEee
Confidence 9999999854
No 159
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=7.8e-15 Score=121.02 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=89.3
Q ss_pred HHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch
Q 025211 29 DALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL 108 (256)
Q Consensus 29 ~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~ 108 (256)
+++...+......++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|+++....+....++++|+.+..
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc
Confidence 33333333332356789999999999998877764 458999999999999999999888777799999998753
Q ss_pred hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 109 EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 109 ~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
. +++||+|++........ .......++..+.++|+|||++++..+.
T Consensus 102 ~---~~~fD~v~~~~~~~~~~------------------~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 102 F---KNEFDAVTMFFSTIMYF------------------DEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp C---CSCEEEEEECSSGGGGS------------------CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c---CCCccEEEEcCCchhcC------------------CHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 2 36899999853211100 0123678899999999999999986553
No 160
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.61 E-value=2.7e-14 Score=121.34 Aligned_cols=133 Identities=12% Similarity=0.090 Sum_probs=95.3
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhchhhhcCCCccEEEEC
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGLEKRLAGLVDVMVVN 122 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~Ii~n 122 (256)
.+|||||||+|.++.++++. +|+.+++++|+++.+++.|++++..... ..+++.+|+.+.+....+++||+|+++
T Consensus 91 ~rVLdIG~G~G~la~~la~~----~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADV----YPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHH----STTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHH----CCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 49999999999998888776 6788999999999999999998764422 238999999987655445789999998
Q ss_pred CCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH---HHHHHHHHHcCCcEEEEEe
Q 025211 123 PPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP---SQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 123 pP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~ 198 (256)
.+........ .....+++.+.++|+|||++++........ ..+.+.+.+. |....++.
T Consensus 167 ~~~~~~~~~~-----------------L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~~~ 227 (317)
T 3gjy_A 167 VFAGAITPQN-----------------FTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHVAVIA 227 (317)
T ss_dssp CSTTSCCCGG-----------------GSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred CCCccccchh-----------------hhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCceEEEE
Confidence 6432111100 012578999999999999999876543322 2344455444 55544443
No 161
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.61 E-value=1.2e-14 Score=115.86 Aligned_cols=118 Identities=17% Similarity=0.280 Sum_probs=85.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.+++.++.. +...|+|+|+++.+++.|++++. ..+++++|+.+. +++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-----~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~-----~~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-----GAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEI-----SGKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-----TBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGC-----CCCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-----CCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHC-----CCCeeEEE
Confidence 46789999999999998887764 22379999999999999999865 458999998874 26899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 196 (256)
+||||++..... ...+++.+.+.+ |.++++... .....+.+.+...| ....+
T Consensus 116 ~~~p~~~~~~~~-------------------~~~~l~~~~~~~---g~~~~~~~~-~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 116 MNPPFGSVVKHS-------------------DRAFIDKAFETS---MWIYSIGNA-KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp ECCCC--------------------------CHHHHHHHHHHE---EEEEEEEEG-GGHHHHHHHHHHHE-EEEEE
T ss_pred ECCCchhccCch-------------------hHHHHHHHHHhc---CcEEEEEcC-chHHHHHHHHHHCC-CEEEE
Confidence 999998654311 235677777777 445554443 34567777888887 55444
No 162
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.61 E-value=5.9e-15 Score=118.19 Aligned_cols=109 Identities=11% Similarity=0.123 Sum_probs=85.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. ++.+++|+|+++.+++.+++++...+...+++++|+.+. ++.+++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-----DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL--PFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-----TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC--CSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC--CCCCCceeEEE
Confidence 46799999999999875443332 356999999999999999999887776668999998775 23457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
++.++++.+. .....++..+.++|||||++++....
T Consensus 95 ~~~~l~~~~~-------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 95 SYGTIFHMRK-------------------NDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp ECSCGGGSCH-------------------HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EcChHHhCCH-------------------HHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9765543321 23678899999999999999997653
No 163
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.61 E-value=2e-14 Score=123.60 Aligned_cols=140 Identities=14% Similarity=0.116 Sum_probs=109.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
+..+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++++...++. .+++.+|+.+.. +.+||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----p~~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTA----HEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL----PAGAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC----CCSCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHH----CCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC----CCCCcEE
Confidence 4689999999999998888776 78889999999 99999999999888764 389999987432 2389999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC---------------------CC
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA---------------------ND 178 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------------~~ 178 (256)
++.-.+++.+++ ....+++++.+.|+|||+++++.... ..
T Consensus 240 ~~~~vlh~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t 300 (332)
T 3i53_A 240 VLSAVLHDWDDL-------------------SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERS 300 (332)
T ss_dssp EEESCGGGSCHH-------------------HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCC
T ss_pred EEehhhccCCHH-------------------HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCC
Confidence 997655443332 25789999999999999999976422 23
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 179 PSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 179 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
.+++.+++.+.||+...+..... ..+++.++
T Consensus 301 ~~e~~~ll~~aGf~~~~~~~~~~----~~vie~r~ 331 (332)
T 3i53_A 301 LAELGELAAQAGLAVRAAHPISY----VSIVEMTA 331 (332)
T ss_dssp HHHHHHHHHHTTEEEEEEEECSS----SEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEECCC----cEEEEEee
Confidence 56788899999999887776543 45566543
No 164
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.61 E-value=8.6e-15 Score=119.60 Aligned_cols=105 Identities=17% Similarity=0.230 Sum_probs=87.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhc-CCCcc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRL-AGLVD 117 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~-~~~fD 117 (256)
.++.+|||+|||+|..++.++.. .|+.+|+++|+++.+++.|++++...++. ..++.+|+.+..+... +++||
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQA----LPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHH----CTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCcc
Confidence 36789999999999999888887 56779999999999999999999988874 3899999887644321 47899
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+++.+.. ....+++.+.++|+|||++++..
T Consensus 129 ~I~~~~~~~------------------------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 129 VLFIDAAKG------------------------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEGGGS------------------------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEEECCCHH------------------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 999976531 15788999999999999999853
No 165
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.60 E-value=1e-14 Score=123.03 Aligned_cols=129 Identities=12% Similarity=0.093 Sum_probs=93.1
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-----ce
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-----AD 98 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-----~~ 98 (256)
...+.+++.+.+.. .++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++....+.. ..
T Consensus 42 ~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 42 TAEYKAWLLGLLRQ---HGCHRVLDVACGTGVDSIMLVEE------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp CHHHHHHHHHHHHH---TTCCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred HHHHHHHHHHHhcc---cCCCEEEEecCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHhhhhcccccccceee
Confidence 45555666655532 46789999999999998877765 459999999999999999987554332 26
Q ss_pred EEEcchhhchhh-hcCCCccEEEEC-CCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 99 LINTDIASGLEK-RLAGLVDVMVVN-PPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 99 ~~~~d~~~~~~~-~~~~~fD~Ii~n-pP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+..+|+.+.... +.+++||+|+++ ..+.+.++.. ........+++++.++|||||++++..+.
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~--------------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSK--------------GDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSS--------------SSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcCccc--------------cCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 788888775321 245789999997 4554433300 01123678999999999999999997763
No 166
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.60 E-value=1e-15 Score=129.54 Aligned_cols=137 Identities=14% Similarity=0.162 Sum_probs=95.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC--------------------------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-------------------------- 95 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-------------------------- 95 (256)
++++|||+|||+|.+++.++.. +++.+|+|+|+++.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~----~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACK----WGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHH----TCCSEEEEEESCHHHHHHHHHTC-------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHH----cCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccc
Confidence 6899999999999999988887 5677999999999999999998765431
Q ss_pred ---------------------------------cceEEEcchhhch---hhhcCCCccEEEECCCCCCCCCcccccccch
Q 025211 96 ---------------------------------HADLINTDIASGL---EKRLAGLVDVMVVNPPYVPTPEDEVGREGIA 139 (256)
Q Consensus 96 ---------------------------------~~~~~~~d~~~~~---~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~ 139 (256)
...+.++|+.... .+...++||+|+|.....+ .+
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~----------ih 191 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKW----------VH 191 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHH----------HH
T ss_pred ccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHH----------hh
Confidence 2378888887543 1234688999999643210 00
Q ss_pred hhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------------CHHHHHHHHHH--cCCcEEEE
Q 025211 140 SAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------------------DPSQICLQMME--KGYAARIV 196 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------~~~~~~~~~~~--~g~~~~~~ 196 (256)
.. .+......+++.+.++|+|||++++....+. ..+++..++.+ .||....+
T Consensus 192 l~-----~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~ 266 (292)
T 3g07_A 192 LN-----WGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYEL 266 (292)
T ss_dssp HH-----HHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEE
T ss_pred hc-----CCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEE
Confidence 00 0112367899999999999999998532211 13456667776 78876544
Q ss_pred E
Q 025211 197 V 197 (256)
Q Consensus 197 ~ 197 (256)
.
T Consensus 267 ~ 267 (292)
T 3g07_A 267 V 267 (292)
T ss_dssp C
T ss_pred e
Confidence 3
No 167
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.60 E-value=5.4e-15 Score=122.77 Aligned_cols=121 Identities=12% Similarity=0.056 Sum_probs=84.0
Q ss_pred HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211 27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS 106 (256)
Q Consensus 27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~ 106 (256)
.++.+++.+. ..++.+|||+|||+|.+++.+++. ++.|+|+|+|+.|++.|++++..+.....+...+..
T Consensus 33 ~~~~il~~l~---l~~g~~VLDlGcGtG~~a~~La~~------g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~- 102 (261)
T 3iv6_A 33 DRENDIFLEN---IVPGSTVAVIGASTRFLIEKALER------GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE- 102 (261)
T ss_dssp HHHHHHHTTT---CCTTCEEEEECTTCHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC-
T ss_pred HHHHHHHhcC---CCCcCEEEEEeCcchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccc-
Confidence 3445555443 357899999999999999888775 458999999999999999987644222222222220
Q ss_pred chhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC
Q 025211 107 GLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND 178 (256)
Q Consensus 107 ~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (256)
.....+++||+|+++..+++.... ....++..+.++| |||++++.......
T Consensus 103 -~~~~~~~~fD~Vv~~~~l~~~~~~-------------------~~~~~l~~l~~lL-PGG~l~lS~~~g~~ 153 (261)
T 3iv6_A 103 -IPKELAGHFDFVLNDRLINRFTTE-------------------EARRACLGMLSLV-GSGTVRASVKLGFY 153 (261)
T ss_dssp -CCGGGTTCCSEEEEESCGGGSCHH-------------------HHHHHHHHHHHHH-TTSEEEEEEEBSCC
T ss_pred -cccccCCCccEEEEhhhhHhCCHH-------------------HHHHHHHHHHHhC-cCcEEEEEeccCcc
Confidence 011124789999998776543321 2567899999999 99999997765443
No 168
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.60 E-value=2.1e-14 Score=127.45 Aligned_cols=142 Identities=18% Similarity=0.207 Sum_probs=101.5
Q ss_pred eeccCC-ccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211 11 VSSHPE-VYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK 88 (256)
Q Consensus 11 ~~~~~~-~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~ 88 (256)
+.+.++ +|+.... ++.+++++.+ + .++.+|||+|||+|.+++.+++. ...|+|+|+++.+++.|++
T Consensus 263 f~~~~~~F~q~n~~~~e~l~~~~~~-~-----~~~~~VLDlgcG~G~~sl~la~~------~~~V~gvD~s~~ai~~A~~ 330 (425)
T 2jjq_A 263 YLIHPNSFFQTNSYQAVNLVRKVSE-L-----VEGEKILDMYSGVGTFGIYLAKR------GFNVKGFDSNEFAIEMARR 330 (425)
T ss_dssp EEECTTSCCCSBHHHHHHHHHHHHH-H-----CCSSEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHH
T ss_pred EEEccccccccCHHHHHHHHHHhhc-c-----CCCCEEEEeeccchHHHHHHHHc------CCEEEEEECCHHHHHHHHH
Confidence 445555 4544433 6677777766 2 46789999999999999988875 3489999999999999999
Q ss_pred HHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeE
Q 025211 89 TLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGW 168 (256)
Q Consensus 89 ~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 168 (256)
|+..++++.+++.+|+.+... .+||+|++|||+... ...+++.+. .|+|+|+
T Consensus 331 n~~~ngl~v~~~~~d~~~~~~----~~fD~Vv~dPPr~g~-----------------------~~~~~~~l~-~l~p~gi 382 (425)
T 2jjq_A 331 NVEINNVDAEFEVASDREVSV----KGFDTVIVDPPRAGL-----------------------HPRLVKRLN-REKPGVI 382 (425)
T ss_dssp HHHHHTCCEEEEECCTTTCCC----TTCSEEEECCCTTCS-----------------------CHHHHHHHH-HHCCSEE
T ss_pred HHHHcCCcEEEEECChHHcCc----cCCCEEEEcCCccch-----------------------HHHHHHHHH-hcCCCcE
Confidence 999988777899999988642 289999999996311 123455444 4899999
Q ss_pred EEEEEeCCCCHHHHHHHHHHcCCcEEEE
Q 025211 169 LYLVTLTANDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 196 (256)
+++++. ...+.+.+....|....+
T Consensus 383 vyvsc~----p~tlarDl~~l~y~l~~~ 406 (425)
T 2jjq_A 383 VYVSCN----PETFARDVKMLDYRIDEI 406 (425)
T ss_dssp EEEESC----HHHHHHHHHHSSCCEEEE
T ss_pred EEEECC----hHHHHhHHhhCeEEEEEE
Confidence 998653 233333333333555443
No 169
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.60 E-value=5.3e-15 Score=120.55 Aligned_cols=135 Identities=17% Similarity=0.179 Sum_probs=94.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-HHHHHHH---HHHHHHcCCcc-eEEEcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-PYAVEVT---RKTLEAHNVHA-DLINTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-~~~i~~a---~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~ 115 (256)
.++.+|||+|||+|.+++.+++. .+++.|+|+|+| +.+++.| ++++...++.+ .++++|+.+.... ..+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~----~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~-~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIN----DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE-LKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHT----CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG-GTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHh----CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh-ccCe
Confidence 47889999999999998877765 678899999999 6666665 77777777764 8999998876322 2377
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------CHH
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------------DPS 180 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------~~~ 180 (256)
+|.|.+++|+... ..... .....++.++.++|||||+++++..... ...
T Consensus 98 v~~i~~~~~~~~~----------~~~~~------~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 161 (225)
T 3p2e_A 98 ADSISILFPWGTL----------LEYVI------KPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKA 161 (225)
T ss_dssp EEEEEEESCCHHH----------HHHHH------TTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHH
T ss_pred EEEEEEeCCCcHH----------hhhhh------cchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChh
Confidence 8999998886320 00000 0024678999999999999998332111 111
Q ss_pred -----HHHHHHHHcCCcEEEE
Q 025211 181 -----QICLQMMEKGYAARIV 196 (256)
Q Consensus 181 -----~~~~~~~~~g~~~~~~ 196 (256)
++...+.+.||.+...
T Consensus 162 ~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 162 YFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp HHHSHHHHHHHHHHTCEEEEE
T ss_pred hcchHHHHHHHHHcCCCeeee
Confidence 2667777788876544
No 170
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.60 E-value=2e-14 Score=123.73 Aligned_cols=140 Identities=16% Similarity=0.137 Sum_probs=95.9
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+.+...+..++.+....-+.+.. +.-.....+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++
T Consensus 90 l~ldg~~~~~~~de~~y~e~L~~-l~l~~~~~~~~VLdIG~G~G~~a~~la~~----~~~~~V~~VDis~~~l~~Ar~~~ 164 (334)
T 1xj5_A 90 LVLDGVIQLTERDECAYQEMITH-LPLCSIPNPKKVLVIGGGDGGVLREVARH----ASIEQIDMCEIDKMVVDVSKQFF 164 (334)
T ss_dssp EEETTEEEEETTTHHHHHHHHHH-HHHTTSSCCCEEEEETCSSSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHC
T ss_pred EEECCEeecCcCcchHHHHHHHH-HHHhhCCCCCEEEEECCCccHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHH
Confidence 44566677777662222222221 11111135689999999999987766654 55679999999999999999998
Q ss_pred HHc--CC---cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc
Q 025211 91 EAH--NV---HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK 165 (256)
Q Consensus 91 ~~~--~~---~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 165 (256)
... ++ ..+++.+|+.+.+....+++||+|++|++-..... . + .....+++.+.++|+|
T Consensus 165 ~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~--------~--------~-l~~~~~l~~~~~~Lkp 227 (334)
T 1xj5_A 165 PDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPA--------K--------E-LFEKPFFQSVARALRP 227 (334)
T ss_dssp HHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGG--------G--------G-GGSHHHHHHHHHHEEE
T ss_pred HhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcc--------h--------h-hhHHHHHHHHHHhcCC
Confidence 753 33 34899999988754433578999999875211000 0 0 0136889999999999
Q ss_pred CeEEEEE
Q 025211 166 RGWLYLV 172 (256)
Q Consensus 166 gG~l~~~ 172 (256)
||++++.
T Consensus 228 gG~lv~~ 234 (334)
T 1xj5_A 228 GGVVCTQ 234 (334)
T ss_dssp EEEEEEE
T ss_pred CcEEEEe
Confidence 9999985
No 171
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=1.1e-14 Score=117.04 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=83.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
++.+|||+|||+|..++.++.. .+ +.+|+++|+++.+++.|++++...++.. +++.+|+.+..+.. ++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARA----ISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-RD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTT----SCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-CS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-CC-CCE
Confidence 5789999999999998888776 34 6799999999999999999999888743 89999998765432 45 999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
|+++.+.. ....+++.+.++|+|||++++.
T Consensus 130 v~~~~~~~------------------------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDVF------------------------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEETTTS------------------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEcCChh------------------------hhHHHHHHHHHhcCCCeEEEEE
Confidence 99974311 1578899999999999999874
No 172
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.60 E-value=4.8e-14 Score=119.29 Aligned_cols=161 Identities=13% Similarity=0.111 Sum_probs=101.0
Q ss_pred eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+.++.....+..+....-+.+... .-....++++|||+|||+|.++.++++. .+..+|+++|+++.+++.|++++
T Consensus 53 L~ldg~~~~~~~de~~Y~e~l~~~-~l~~~~~~~~VLdiG~G~G~~~~~l~~~----~~~~~V~~VDid~~vi~~ar~~~ 127 (294)
T 3adn_A 53 MALDGVVQTTERDEFIYHEMMTHV-PLLAHGHAKHVLIIGGGDGAMLREVTRH----KNVESITMVEIDAGVVSFCRQYL 127 (294)
T ss_dssp EEETTEEEEETTTHHHHHHHHHHH-HHHHSTTCCEEEEESCTTCHHHHHHHTC----TTCCEEEEECSCTTHHHHHHHHC
T ss_pred EEECCeEeeccCchhHHHHHHHHH-HHhcCCCCCEEEEEeCChhHHHHHHHhC----CCCCEEEEEECCHHHHHHHHHhh
Confidence 445566666666633333332211 1011135789999999999988777654 45678999999999999999998
Q ss_pred HHcC------CcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211 91 EAHN------VHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS 164 (256)
Q Consensus 91 ~~~~------~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 164 (256)
...+ ...+++.+|+.+.+.. .+++||+|++|++-...+.. ......+++.+.+.|+
T Consensus 128 ~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fDvIi~D~~~p~~~~~-----------------~l~~~~f~~~~~~~Lk 189 (294)
T 3adn_A 128 PNHNAGSYDDPRFKLVIDDGVNFVNQ-TSQTFDVIISDCTDPIGPGE-----------------SLFTSAFYEGCKRCLN 189 (294)
T ss_dssp HHHHSSCTTCTTCCEECSCSCC---C-CCCCEEEEEECC---------------------------CCHHHHHHHHHTEE
T ss_pred hhcccccccCCceEEEEChHHHHHhh-cCCCccEEEECCCCccCcch-----------------hccHHHHHHHHHHhcC
Confidence 7642 1348999998877543 35789999998763211110 0012678999999999
Q ss_pred cCeEEEEEEeCCC-C---HHHHHHHHHHcCCcEEE
Q 025211 165 KRGWLYLVTLTAN-D---PSQICLQMMEKGYAARI 195 (256)
Q Consensus 165 pgG~l~~~~~~~~-~---~~~~~~~~~~~g~~~~~ 195 (256)
|||++++...+.. . ...+.+.+.+. |....
T Consensus 190 pgG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~ 223 (294)
T 3adn_A 190 PGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVG 223 (294)
T ss_dssp EEEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEEE
T ss_pred CCCEEEEecCCcccchHHHHHHHHHHHHH-CCCeE
Confidence 9999998654222 1 22344445544 55444
No 173
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.60 E-value=5e-14 Score=122.45 Aligned_cols=141 Identities=13% Similarity=0.190 Sum_probs=108.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++++...++. .+++.+|+.+. +. ..+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~--~~~D~ 259 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKH----FPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--SY--PEADA 259 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHH----CTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CC--CCCSE
T ss_pred CCCCEEEEECCcccHHHHHHHHH----CCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--CC--CCCCE
Confidence 46789999999999998888877 78889999999 99999999999888765 38999999875 22 23499
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC---------------------C-
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT---------------------A- 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------------~- 176 (256)
|++...+++.++ .....+++++.+.|+|||+++++... .
T Consensus 260 v~~~~vlh~~~d-------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (359)
T 1x19_A 260 VLFCRILYSANE-------------------QLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPF 320 (359)
T ss_dssp EEEESCGGGSCH-------------------HHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSC
T ss_pred EEEechhccCCH-------------------HHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCC
Confidence 999766544332 12578899999999999999887621 1
Q ss_pred -----CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 177 -----NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 177 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
...+++.+++++.||+...+.... ...++++.|
T Consensus 321 ~~~~~~t~~e~~~ll~~aGf~~v~~~~~~----~~~vi~a~k 358 (359)
T 1x19_A 321 SVLGFKEQARYKEILESLGYKDVTMVRKY----DHLLVQAVK 358 (359)
T ss_dssp CCCCCCCGGGHHHHHHHHTCEEEEEEEET----TEEEEEEEC
T ss_pred cccCCCCHHHHHHHHHHCCCceEEEEecC----CceEEEEeC
Confidence 345678899999999887766543 345555544
No 174
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.59 E-value=7.1e-14 Score=120.14 Aligned_cols=133 Identities=12% Similarity=0.136 Sum_probs=104.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|++ .+++.|++++...++. .+++.+|+.+.. . +..||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-~~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQH----NPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD--Y-GNDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHH----CTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC--C-CSCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHH----CCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC--C-CCCCcE
Confidence 46789999999999998888877 678899999999 9999999999888875 389999987752 2 245999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------------- 177 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------------- 177 (256)
|++.-++++.++ .....+++.+.+.|+|||+++++.....
T Consensus 236 v~~~~~l~~~~~-------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (335)
T 2r3s_A 236 VLLPNFLHHFDV-------------------ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTP 296 (335)
T ss_dssp EEEESCGGGSCH-------------------HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSS
T ss_pred EEEcchhccCCH-------------------HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCC
Confidence 999655443322 1256889999999999999998764322
Q ss_pred -----CHHHHHHHHHHcCCcEEEEEecC
Q 025211 178 -----DPSQICLQMMEKGYAARIVVQRS 200 (256)
Q Consensus 178 -----~~~~~~~~~~~~g~~~~~~~~~~ 200 (256)
..+++.+.+.+.||....+....
T Consensus 297 ~~~~~t~~~~~~ll~~aGf~~~~~~~~~ 324 (335)
T 2r3s_A 297 NGDAYTFAEYESMFSNAGFSHSQLHSLP 324 (335)
T ss_dssp SCCCCCHHHHHHHHHHTTCSEEEEECCT
T ss_pred CCCcCCHHHHHHHHHHCCCCeeeEEECC
Confidence 24577888899999987766543
No 175
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.59 E-value=1.8e-14 Score=118.24 Aligned_cols=104 Identities=22% Similarity=0.206 Sum_probs=86.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhc-----CC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRL-----AG 114 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~-----~~ 114 (256)
++++|||+|||+|..++.+++.+. ++++++++|+++.+++.|++++...++.. +++.+|+.+.++... .+
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIP---DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSC---TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 678999999999999999988742 26799999999999999999999988853 899999988655431 47
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
+||+|+++.+. ..+..+++.+.++|+|||++++.
T Consensus 147 ~fD~I~~d~~~------------------------~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 147 SYDFGFVDADK------------------------PNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp CEEEEEECSCG------------------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCEEEECCch------------------------HHHHHHHHHHHHhcCCCeEEEEe
Confidence 89999997431 11578899999999999999884
No 176
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.59 E-value=3.9e-14 Score=123.09 Aligned_cols=146 Identities=16% Similarity=0.196 Sum_probs=110.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++. +++.+++++|+ +.+++.|++++...++. .+++.+|+.+..+ ..||+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~D~ 252 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARR----APHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP----RKADA 252 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS----SCEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHh----CCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC----CCccE
Confidence 46789999999999998888877 67889999999 99999999999888775 4899999876432 35999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC-C---------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT-A--------------------- 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~--------------------- 176 (256)
|++...+++.++. ....+++++.+.|+|||+++++... .
T Consensus 253 v~~~~vl~~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (360)
T 1tw3_A 253 IILSFVLLNWPDH-------------------DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLG 313 (360)
T ss_dssp EEEESCGGGSCHH-------------------HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS
T ss_pred EEEcccccCCCHH-------------------HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcC
Confidence 9997665443321 1358899999999999999987644 1
Q ss_pred ---CCHHHHHHHHHHcCCcEEEEEecCCC--CccEEEEEEEec
Q 025211 177 ---NDPSQICLQMMEKGYAARIVVQRSTE--EENLHIIKFWRD 214 (256)
Q Consensus 177 ---~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~l~~~~~~ 214 (256)
...+++.+++++.||....+...... .....++++.+.
T Consensus 314 ~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 314 GALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp CCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEeC
Confidence 12456778888899988776654332 122466666653
No 177
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.59 E-value=1.9e-14 Score=125.39 Aligned_cols=148 Identities=14% Similarity=0.117 Sum_probs=109.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
....+|||+|||+|.++..+++. +|+.+++++|+ +.+++.|++++...++. .+++.+|+.+...+. +++||+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-p~~~D~ 251 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQY----NKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF-PTGFDA 251 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHH----STTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC-CCCCSE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHh----CCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC-CCCcCE
Confidence 46789999999999998888877 78889999999 99999999998877764 389999988752111 268999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------------- 177 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------------- 177 (256)
|++.-.++..++. ....+++++.+.|+|||+++++.....
T Consensus 252 v~~~~vlh~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (363)
T 3dp7_A 252 VWMSQFLDCFSEE-------------------EVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAM 312 (363)
T ss_dssp EEEESCSTTSCHH-------------------HHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHS
T ss_pred EEEechhhhCCHH-------------------HHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhh
Confidence 9997665543332 246889999999999999998663211
Q ss_pred --------CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEecC
Q 025211 178 --------DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWRDF 215 (256)
Q Consensus 178 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (256)
..+++.+++++.||+.+.+....... ..+++..+..
T Consensus 313 ~~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~--~svi~~~~~~ 356 (363)
T 3dp7_A 313 ANGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLG--HSILQCRLKE 356 (363)
T ss_dssp SCSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTT--BEEEEEEEC-
T ss_pred hCCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCC--ceEEEEeecc
Confidence 34567778888888876655443332 3455555543
No 178
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=1.9e-14 Score=120.65 Aligned_cols=102 Identities=18% Similarity=0.211 Sum_probs=82.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++. ++++|+|+|+++.+++.++++. ....++.+|+.+.. + +++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~------~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~--~-~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ------SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFR--V-DKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH------TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCC--C-SSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh------CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCC--c-CCCcCEEE
Confidence 4778999999999999877766 3569999999999999998864 23488999987753 2 57899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
++..+.+.++ ...++.++.++|||||++++..+..
T Consensus 123 ~~~~l~~~~d---------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 123 SNAMLHWVKE---------------------PEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EcchhhhCcC---------------------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9876654332 4688999999999999999977654
No 179
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.59 E-value=1.5e-14 Score=119.17 Aligned_cols=105 Identities=18% Similarity=0.158 Sum_probs=86.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhc----CCC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRL----AGL 115 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~----~~~ 115 (256)
++.+|||+|||+|..++.++..+. ++++|+++|+++++++.|++++...++. .+++.+|+.+.+.... .++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALP---DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSC---TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 678999999999999999888632 3679999999999999999999998875 3899999988755421 478
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
||+|+++.+. .....+++.+.++|+|||++++-.
T Consensus 137 fD~V~~d~~~------------------------~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 137 FDFIFIDADK------------------------TNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEEEEESCG------------------------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EeEEEEcCCh------------------------HHhHHHHHHHHHhcCCCeEEEEEC
Confidence 9999997541 115678999999999999999843
No 180
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=7.6e-15 Score=117.87 Aligned_cols=113 Identities=19% Similarity=0.144 Sum_probs=89.4
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d 103 (256)
..+++.+++.+. ..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++..++... +++.+|
T Consensus 63 ~~~~~~~~~~l~---~~~~~~vLdiG~G~G~~~~~la~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 133 (210)
T 3lbf_A 63 PYMVARMTELLE---LTPQSRVLEIGTGSGYQTAILAHL------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD 133 (210)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 455566666553 257899999999999999888876 3589999999999999999999888765 899999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+.+.... .++||+|+++.++.+.+ ..+.++|||||++++..+.
T Consensus 134 ~~~~~~~--~~~~D~i~~~~~~~~~~---------------------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQA--RAPFDAIIVTAAPPEIP---------------------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCGG--GCCEEEEEESSBCSSCC---------------------------THHHHTEEEEEEEEEEECS
T ss_pred cccCCcc--CCCccEEEEccchhhhh---------------------------HHHHHhcccCcEEEEEEcC
Confidence 9876443 47899999976543221 2467899999999997654
No 181
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=3e-14 Score=119.03 Aligned_cols=111 Identities=13% Similarity=0.078 Sum_probs=85.6
Q ss_pred cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH------HHHHHHHHHHHcCCc--ceEEEcc-hhhchhh
Q 025211 40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY------AVEVTRKTLEAHNVH--ADLINTD-IASGLEK 110 (256)
Q Consensus 40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~------~i~~a~~~~~~~~~~--~~~~~~d-~~~~~~~ 110 (256)
..++.+|||+|||+|.++..++... .++++|+|+|+++. +++.|++++...++. .+++.+| +.....+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~---g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 117 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQV---GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP 117 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH---CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh---CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC
Confidence 3578999999999999998888763 25579999999997 999999999887763 3888887 4333334
Q ss_pred hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 111 RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 111 ~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
+.+++||+|+++.++++.++ ...+++.+..+++|||++++...
T Consensus 118 ~~~~~fD~v~~~~~l~~~~~---------------------~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 118 IADQHFDRVVLAHSLWYFAS---------------------ANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp GTTCCCSEEEEESCGGGSSC---------------------HHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCCCEEEEEEccchhhCCC---------------------HHHHHHHHHHHhCCCCEEEEEEe
Confidence 44688999999887765443 23467777777788999999654
No 182
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.59 E-value=1.4e-14 Score=122.10 Aligned_cols=134 Identities=14% Similarity=0.098 Sum_probs=91.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-----------------CC---------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-----------------NV--------- 95 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-----------------~~--------- 95 (256)
++.+|||+|||+|...+.++. .++..|+|+|+|+.|++.|++++... +.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-----~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-----SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKER 145 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-----GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-----cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHH
Confidence 678999999999994321111 23459999999999999998865321 10
Q ss_pred -----cceEEEcchhhchh----hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC
Q 025211 96 -----HADLINTDIASGLE----KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR 166 (256)
Q Consensus 96 -----~~~~~~~d~~~~~~----~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 166 (256)
..+++.+|+.+..+ .+.+++||+|+++..+.+... .......++.++.++||||
T Consensus 146 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-----------------~~~~~~~~l~~~~r~LkpG 208 (289)
T 2g72_A 146 QLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSP-----------------DLASFQRALDHITTLLRPG 208 (289)
T ss_dssp HHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCS-----------------SHHHHHHHHHHHHTTEEEE
T ss_pred HHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcC-----------------CHHHHHHHHHHHHHhcCCC
Confidence 01466678776322 123467999999765432111 1223678999999999999
Q ss_pred eEEEEEEe---------------CCCCHHHHHHHHHHcCCcEEEEE
Q 025211 167 GWLYLVTL---------------TANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 167 G~l~~~~~---------------~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
|++++... ..-..+++.+.+.+.||....+.
T Consensus 209 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 209 GHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp EEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 99998631 12246788999999999876544
No 183
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.59 E-value=1.5e-14 Score=117.72 Aligned_cols=106 Identities=22% Similarity=0.257 Sum_probs=86.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcC----C
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLA----G 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~----~ 114 (256)
.++.+|||+|||+|..++.+++.+. ++.+|+++|+++.+++.|++++..+++. .+++.+|+.+....... +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP---ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC---TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 3678999999999999888877531 2679999999999999999999988874 38999998876544321 6
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+||+|+++++.. .+..+++.+.++|+|||++++..
T Consensus 145 ~~D~v~~d~~~~------------------------~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 145 TFDVAVVDADKE------------------------NCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp CEEEEEECSCST------------------------THHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCHH------------------------HHHHHHHHHHHHcCCCeEEEEEC
Confidence 899999987621 15688999999999999999843
No 184
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.59 E-value=7.3e-14 Score=131.11 Aligned_cols=167 Identities=13% Similarity=0.121 Sum_probs=112.0
Q ss_pred CCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccC--------------------------------
Q 025211 21 CDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEV-------------------------------- 68 (256)
Q Consensus 21 ~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~-------------------------------- 68 (256)
.+..+.++..++..... .++..|||++||+|.++++++.+.....
T Consensus 172 apl~e~LAa~ll~~~~~---~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~ 248 (703)
T 3v97_A 172 APIKETLAAAIVMRSGW---QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 248 (703)
T ss_dssp CSSCHHHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCC---CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHh
Confidence 34467888888776532 4678999999999999999998753211
Q ss_pred ------CCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchh
Q 025211 69 ------PGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIAS 140 (256)
Q Consensus 69 ------~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~ 140 (256)
+...|+|+|+++.+++.|+.|+..+|+.. ++.++|+.+...+...++||+|++||||...-...
T Consensus 249 ~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~-------- 320 (703)
T 3v97_A 249 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE-------- 320 (703)
T ss_dssp HHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CC--------
T ss_pred hhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccch--------
Confidence 23589999999999999999999999875 89999998865443334899999999996432211
Q ss_pred hhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEE
Q 025211 141 AWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKF 211 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 211 (256)
.....+...+....+.+.|||.+++++.. .++ ....|++...-..-..+.-...++.+
T Consensus 321 ------~~l~~ly~~l~~~lk~~~~g~~~~ilt~~----~~l---~~~~glk~~k~~~l~nG~l~~~~~~y 378 (703)
T 3v97_A 321 ------PALIALHSLLGRIMKNQFGGWNLSLFSAS----PDL---LSCLQLRADKQYKAKNGPLDCVQKNY 378 (703)
T ss_dssp ------HHHHHHHHHHHHHHHHHCTTCEEEEEESC----HHH---HHTTCCCEEEEEEEEETTEEEEEEEE
T ss_pred ------hHHHHHHHHHHHHHHhhCCCCeEEEEeCC----HHH---HHHhCCCcccceeeecCCEEEEEEEE
Confidence 01111223344455556789999998642 222 23567766544444444434444444
No 185
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=7.3e-15 Score=122.17 Aligned_cols=135 Identities=13% Similarity=0.099 Sum_probs=100.6
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+.+.+++.+. ..++.+|||+|||+|.++..++. ++++|+|+|+++.+++.++++. +.+++.+|+
T Consensus 20 ~~~~~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~------~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~ 85 (261)
T 3ege_A 20 IRIVNAIINLLN---LPKGSVIADIGAGTGGYSVALAN------QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYA 85 (261)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEETCTTSHHHHHHHT------TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCT
T ss_pred HHHHHHHHHHhC---CCCCCEEEEEcCcccHHHHHHHh------CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECch
Confidence 456677777664 25789999999999998877664 4679999999999998876643 448999998
Q ss_pred hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-------
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------- 177 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------- 177 (256)
.+. ++.+++||+|+++..+.+..+ ...+++++.++|| ||+++++.....
T Consensus 86 ~~~--~~~~~~fD~v~~~~~l~~~~~---------------------~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~ 141 (261)
T 3ege_A 86 ENL--ALPDKSVDGVISILAIHHFSH---------------------LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWL 141 (261)
T ss_dssp TSC--CSCTTCBSEEEEESCGGGCSS---------------------HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGG
T ss_pred hhC--CCCCCCEeEEEEcchHhhccC---------------------HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHH
Confidence 774 344689999999876554422 5788999999999 998887765421
Q ss_pred ----------------CHHHHHHHHHHcCCcEEEEEe
Q 025211 178 ----------------DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 178 ----------------~~~~~~~~~~~~g~~~~~~~~ 198 (256)
....+. .+++.||..+.+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 142 YDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp GGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred HHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 123455 88888997655543
No 186
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.58 E-value=2e-15 Score=135.88 Aligned_cols=127 Identities=15% Similarity=0.196 Sum_probs=96.7
Q ss_pred cCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211 14 HPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH 93 (256)
Q Consensus 14 ~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~ 93 (256)
++.++.++..++.+.+.+++.+. ..++.+|||+|||+|.+++.+++. +..+|+|+|+++ +++.|++++..+
T Consensus 133 ~~~~L~d~~~t~~~~~~il~~l~---~~~~~~VLDiGcGtG~la~~la~~-----~~~~V~gvD~s~-~l~~A~~~~~~~ 203 (480)
T 3b3j_A 133 QQNMMQDYVRTGTYQRAILQNHT---DFKDKIVLDVGCGSGILSFFAAQA-----GARKIYAVEAST-MAQHAEVLVKSN 203 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGG---GTTTCEEEEESCSTTHHHHHHHHT-----TCSEEEEEECHH-HHHHHHHHHHHT
T ss_pred chhhhcChHhHHHHHHHHHHhhh---hcCCCEEEEecCcccHHHHHHHHc-----CCCEEEEEEcHH-HHHHHHHHHHHc
Confidence 44566666667777777777653 246789999999999998877663 456999999998 999999999999
Q ss_pred CCc--ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 94 NVH--ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 94 ~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
++. .+++.+|+.+... +++||+|+++++.++.... .....+..+.++|||||++++
T Consensus 204 gl~~~v~~~~~d~~~~~~---~~~fD~Ivs~~~~~~~~~e-------------------~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 204 NLTDRIVVIPGKVEEVSL---PEQVDIIISEPMGYMLFNE-------------------RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp TCTTTEEEEESCTTTCCC---SSCEEEEECCCCHHHHTCH-------------------HHHHHHHHGGGGEEEEEEEES
T ss_pred CCCCcEEEEECchhhCcc---CCCeEEEEEeCchHhcCcH-------------------HHHHHHHHHHHhcCCCCEEEE
Confidence 874 3899999987522 3689999999884321111 134566688999999999985
No 187
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.58 E-value=2.5e-14 Score=124.98 Aligned_cols=123 Identities=19% Similarity=0.216 Sum_probs=95.5
Q ss_pred CCccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211 15 PEVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH 93 (256)
Q Consensus 15 ~~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~ 93 (256)
+.+|.|... .+.+...++..+ ++.+|||+|||+|.+++.+++. .++..|+++|+++.+++.+++|+..+
T Consensus 25 ~~F~np~~~~nr~l~~~~l~~~------~~~~VLDl~aGtG~~~l~~a~~----~~~~~V~avDi~~~av~~a~~N~~~n 94 (378)
T 2dul_A 25 PVFYNPRMALNRDIVVVLLNIL------NPKIVLDALSATGIRGIRFALE----TPAEEVWLNDISEDAYELMKRNVMLN 94 (378)
T ss_dssp CCCCCGGGHHHHHHHHHHHHHH------CCSEEEESSCTTSHHHHHHHHH----SSCSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CceeCCchHHHHHHHHHHHHHc------CCCEEEECCCchhHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 457777765 222322233332 5789999999999999999887 34568999999999999999999999
Q ss_pred ---------------CCc-ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHH
Q 025211 94 ---------------NVH-ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILP 157 (256)
Q Consensus 94 ---------------~~~-~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (256)
++. .+++++|+.+..... .++||+|+.|||+. ...+++
T Consensus 95 ~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~-~~~fD~I~lDP~~~-------------------------~~~~l~ 148 (378)
T 2dul_A 95 FDGELRESKGRAILKGEKTIVINHDDANRLMAER-HRYFHFIDLDPFGS-------------------------PMEFLD 148 (378)
T ss_dssp CCSCCEECSSEEEEESSSEEEEEESCHHHHHHHS-TTCEEEEEECCSSC-------------------------CHHHHH
T ss_pred cccccccccccccccCCCceEEEcCcHHHHHHhc-cCCCCEEEeCCCCC-------------------------HHHHHH
Confidence 876 489999998875432 45799999998742 246788
Q ss_pred HHhhccccCeEEEEEE
Q 025211 158 SADKLLSKRGWLYLVT 173 (256)
Q Consensus 158 ~~~~~LkpgG~l~~~~ 173 (256)
.+.+.|++||+++++.
T Consensus 149 ~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 149 TALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEEEe
Confidence 8889999999888754
No 188
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.57 E-value=2.4e-14 Score=122.62 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=95.6
Q ss_pred eeccCCccccCCch----HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH
Q 025211 11 VSSHPEVYEPCDDS----FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT 86 (256)
Q Consensus 11 ~~~~~~~~~p~~~~----~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a 86 (256)
+.+...+..|+.+. ++++...+.. ..++.+|||+|||+|.++.++++. .+..+|+++|+++.+++.|
T Consensus 86 l~ldg~~~~~~~de~~y~e~l~~~~l~~-----~~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDis~~~l~~a 156 (321)
T 2pt6_A 86 LVLDGVIQLTEKDEFAYHEMMTHVPMTV-----SKEPKNVLVVGGGDGGIIRELCKY----KSVENIDICEIDETVIEVS 156 (321)
T ss_dssp EEETTEEEEETTTHHHHHHHHHHHHHHH-----SSSCCEEEEEECTTCHHHHHHTTC----TTCCEEEEEESCHHHHHHH
T ss_pred EEECCEeeeCcccchHHHHHHHHHHHhc-----CCCCCEEEEEcCCccHHHHHHHHc----CCCCEEEEEECCHHHHHHH
Confidence 34566677888773 3333322211 135689999999999987766653 4567999999999999999
Q ss_pred HHHHHH--cCC---cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhh
Q 025211 87 RKTLEA--HNV---HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADK 161 (256)
Q Consensus 87 ~~~~~~--~~~---~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (256)
++++.. +++ ..+++.+|+.+.... .+++||+|++|++-...+ ...+ ....+++.+.+
T Consensus 157 r~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fDvIi~d~~~p~~~---------~~~l--------~~~~~l~~~~~ 218 (321)
T 2pt6_A 157 KIYFKNISCGYEDKRVNVFIEDASKFLEN-VTNTYDVIIVDSSDPIGP---------AETL--------FNQNFYEKIYN 218 (321)
T ss_dssp HHHCTTTSGGGGSTTEEEEESCHHHHHHH-CCSCEEEEEEECCCSSSG---------GGGG--------SSHHHHHHHHH
T ss_pred HHHHHhhccccCCCcEEEEEccHHHHHhh-cCCCceEEEECCcCCCCc---------chhh--------hHHHHHHHHHH
Confidence 999765 222 238999999876533 357899999987421100 0000 01688999999
Q ss_pred ccccCeEEEEEEe
Q 025211 162 LLSKRGWLYLVTL 174 (256)
Q Consensus 162 ~LkpgG~l~~~~~ 174 (256)
.|+|||++++...
T Consensus 219 ~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 219 ALKPNGYCVAQCE 231 (321)
T ss_dssp HEEEEEEEEEEEC
T ss_pred hcCCCcEEEEEcC
Confidence 9999999999654
No 189
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.57 E-value=1.4e-13 Score=117.19 Aligned_cols=142 Identities=13% Similarity=0.063 Sum_probs=96.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhc-CCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRL-AGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~-~~~fD~ 118 (256)
.++.+|||+|||+|..++.++..+. +...|+|+|+++.+++.+++|+.++++.+ .++++|+.+...... ..+||.
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~---~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLK---NQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCE
Confidence 5789999999999999999998753 34699999999999999999999999865 899999877643211 157999
Q ss_pred EEECCCCCCCCCcccccccchhhhc---CCCC---cHHHHHHHHHHHhhccccCeEEEEEEeCCCC---HHHHHHHHHHc
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWA---GGEN---GRAVIDKILPSADKLLSKRGWLYLVTLTAND---PSQICLQMMEK 189 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~~~~~ 189 (256)
|++|||+.....-. +.++..|. ...+ -......++..+.++|+ ||++++++++... ...+...+.++
T Consensus 178 Vl~D~PcSg~G~~~---r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 178 ILLDPSCSGSGMPS---RQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQN 253 (309)
T ss_dssp EEECCCCCC---------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTS
T ss_pred EEEcCCcCCCCCCc---cCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhC
Confidence 99999986433211 11111110 0011 01234567888888887 9999998876542 23445555544
No 190
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.57 E-value=7.8e-14 Score=108.11 Aligned_cols=131 Identities=12% Similarity=0.116 Sum_probs=93.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch-----hh-hcCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL-----EK-RLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~-----~~-~~~~ 114 (256)
.++.+|||+|||+|.++..+++.+ .++.+++|+|+++ +++. ...+++.+|+.+.. .. ..++
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~---~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQI---GGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHH---CTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHh---CCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCC
Confidence 477899999999999998888764 2457999999999 6543 12388888987652 11 3357
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAAR 194 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (256)
+||+|++++|+........... ........++..+.++|+|||++++..........+...+... |...
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~ 156 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIP----------RAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKV 156 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHH----------HHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEE
T ss_pred ceeEEEECCCccccCCCccchH----------HHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhE
Confidence 8999999999865443210000 0011236889999999999999999888777777777777765 5544
Q ss_pred E
Q 025211 195 I 195 (256)
Q Consensus 195 ~ 195 (256)
.
T Consensus 157 ~ 157 (180)
T 1ej0_A 157 K 157 (180)
T ss_dssp E
T ss_pred E
Confidence 3
No 191
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.57 E-value=6.3e-14 Score=117.71 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=81.0
Q ss_pred CCCCEEEEecccccHHHH-HHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVIT-SLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~-~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++. .+++ .++++|+|+|+++++++.|++++...++.. +++++|+.+.. +++||+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~-----~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----d~~FDv 191 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSH-----VYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----GLEFDV 191 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHH-----TTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----GCCCSE
T ss_pred CCcCEEEEECCCccHHHHHHHHH-----ccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----CCCcCE
Confidence 688999999999987653 3333 457899999999999999999999888743 99999998752 478999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|++.-. .+ ....+++++.+.|||||++++..
T Consensus 192 V~~~a~---~~---------------------d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL---AE---------------------PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEECTT---CS---------------------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCC---cc---------------------CHHHHHHHHHHHcCCCcEEEEEc
Confidence 998421 00 15789999999999999999865
No 192
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.57 E-value=1.6e-14 Score=134.49 Aligned_cols=173 Identities=16% Similarity=0.041 Sum_probs=107.9
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH--HHHHHH
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT--RKTLEA 92 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a--~~~~~~ 92 (256)
..+|+|+.....+++.+...+.. ...++.+|||+|||+|.++++++..+... ....++|+|+++.+++.| +.|+..
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~-~l~~g~rVLDPaCGSG~FLIaaA~~l~ei-~~~~IyGvEIDp~Al~LAK~RlNL~l 372 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGR-PLTEDEVISDPAAGSGNLLATVSAGFNNV-MPRQIWANDIETLFLELLSIRLGLLF 372 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCS-CCCTTCEEEETTCTTSHHHHHHHHTSTTC-CGGGEEEECSCGGGHHHHHHHHHTTS
T ss_pred ceEcCCHHHHHHHHHHHhhhccc-cCCCCCEEEECCCCccHHHHHHHHHhccc-CCCeEEEEECCHHHHHHHHHHHHHHH
Confidence 44788865555555542221211 01357899999999999999888765321 135899999999999999 666544
Q ss_pred c----CCcc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhc--------CCCCcHHHHHHHHHHH
Q 025211 93 H----NVHA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWA--------GGENGRAVIDKILPSA 159 (256)
Q Consensus 93 ~----~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~ 159 (256)
+ +... .+...|+.+.. .....+||+||+||||...............++. ......+....+++.+
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~-~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~A 451 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLN-PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELV 451 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCC-GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHH
T ss_pred hhhhcCCCcceEEecchhccc-ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHH
Confidence 2 3333 55556665531 1224689999999999753332111111111110 0111223567889999
Q ss_pred hhccccCeEEEEEEeCCCC------HHHHHHHHHHcC
Q 025211 160 DKLLSKRGWLYLVTLTAND------PSQICLQMMEKG 190 (256)
Q Consensus 160 ~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~g 190 (256)
.++|++||++.++.+..-. ...+++.+.+..
T Consensus 452 l~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~ 488 (878)
T 3s1s_A 452 TELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNF 488 (878)
T ss_dssp HHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTT
T ss_pred HHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCC
Confidence 9999999999999885322 345666665543
No 193
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.57 E-value=1.3e-13 Score=119.35 Aligned_cols=142 Identities=17% Similarity=0.214 Sum_probs=107.9
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccEEE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
+.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++++...++.. +++.+|+.+... +.++.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRR----HPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN-FEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHH----CTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG-GTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHh----CCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc-cCCCCccEEE
Confidence 799999999999998888877 78889999999 889999999998888753 899999887641 1246799999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC------------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA------------------------ 176 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------ 176 (256)
+...+++.++. ....+++.+.+.|+|||+++++....
T Consensus 254 ~~~vlh~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (352)
T 3mcz_A 254 LNDCLHYFDAR-------------------EAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHG 314 (352)
T ss_dssp EESCGGGSCHH-------------------HHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTC
T ss_pred EecccccCCHH-------------------HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCC
Confidence 97655443321 25789999999999999999976311
Q ss_pred --CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEec
Q 025211 177 --NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWRD 214 (256)
Q Consensus 177 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~ 214 (256)
....++.+++++.||+...... ....++.++|.
T Consensus 315 ~~~t~~e~~~ll~~aGf~~~~~~~-----g~~~l~~a~kp 349 (352)
T 3mcz_A 315 ELHPTPWIAGVVRDAGLAVGERSI-----GRYTLLIGQRS 349 (352)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEE-----TTEEEEEEECC
T ss_pred CcCCHHHHHHHHHHCCCceeeecc-----CceEEEEEecC
Confidence 1245778888999998766321 22455555553
No 194
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.57 E-value=1.9e-14 Score=119.35 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=97.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-------------------------
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV------------------------- 95 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~------------------------- 95 (256)
.++.+|||+|||+|.+++.++.. ++ ..|+|+|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~----~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACE----SF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKE 129 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGG----TE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhc----cc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHH
Confidence 56789999999999976555443 33 4899999999999999988764431
Q ss_pred -----cc-eEEEcchhhchh--hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe
Q 025211 96 -----HA-DLINTDIASGLE--KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG 167 (256)
Q Consensus 96 -----~~-~~~~~d~~~~~~--~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 167 (256)
.. .++.+|+.+... +...++||+|+++..+...+. .......++..+.++|||||
T Consensus 130 ~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~-----------------~~~~~~~~l~~~~~~LkpgG 192 (265)
T 2i62_A 130 EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACP-----------------DLPAYRTALRNLGSLLKPGG 192 (265)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS-----------------SHHHHHHHHHHHHTTEEEEE
T ss_pred HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcC-----------------ChHHHHHHHHHHHhhCCCCc
Confidence 14 778888877532 112278999999654321110 12236788999999999999
Q ss_pred EEEEEEeCC---------------CCHHHHHHHHHHcCCcEEEEEe
Q 025211 168 WLYLVTLTA---------------NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 168 ~l~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
++++..... -..+++.+.+.+.||..+.+..
T Consensus 193 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 193 FLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp EEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 999865321 1355889999999998766553
No 195
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.57 E-value=2.4e-14 Score=115.99 Aligned_cols=103 Identities=13% Similarity=0.145 Sum_probs=81.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++. .+++.+|+.+...++.+++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~ 98 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN------GTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVI 98 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT------TCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEE
Confidence 47899999999999987766553 369999999999999988754 278889987643344457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
++..+.+.++ ...++..+.++|+|||++++..+..
T Consensus 99 ~~~~l~~~~~---------------------~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 99 FGDVLEHLFD---------------------PWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp EESCGGGSSC---------------------HHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred ECChhhhcCC---------------------HHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9766544332 4688999999999999999987653
No 196
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.56 E-value=9.2e-14 Score=112.38 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=91.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++.+|||+|||+|.++..++. . +|+|+++.+++.++++ ..+++.+|+.+. ++.+++||+|++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~---------~-~~vD~s~~~~~~a~~~------~~~~~~~d~~~~--~~~~~~fD~v~~ 108 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI---------K-IGVEPSERMAEIARKR------GVFVLKGTAENL--PLKDESFDFALM 108 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC---------C-EEEESCHHHHHHHHHT------TCEEEECBTTBC--CSCTTCEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHH---------H-hccCCCHHHHHHHHhc------CCEEEEcccccC--CCCCCCeeEEEE
Confidence 378999999999997644321 1 9999999999999886 347888888764 234578999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----------------------C
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-----------------------D 178 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------------------~ 178 (256)
+..+.+.++ ...+++.+.++|+|||++++..+... .
T Consensus 109 ~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (219)
T 1vlm_A 109 VTTICFVDD---------------------PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFS 167 (219)
T ss_dssp ESCGGGSSC---------------------HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCC
T ss_pred cchHhhccC---------------------HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCC
Confidence 766543322 46889999999999999999765321 3
Q ss_pred HHHHHHHHHHcCCcEEEEEecC
Q 025211 179 PSQICLQMMEKGYAARIVVQRS 200 (256)
Q Consensus 179 ~~~~~~~~~~~g~~~~~~~~~~ 200 (256)
..++.+.+.+.||+...+....
T Consensus 168 ~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 168 TEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEeccc
Confidence 5678889999999887665443
No 197
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.56 E-value=4.4e-15 Score=116.33 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=86.4
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD 103 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d 103 (256)
-+.+.+.+...+ .++.+|||+|||+|.+++.++.. .|+++|+|+|+|+.|++.+++++..+|...++...|
T Consensus 36 ld~fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~----~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d 106 (200)
T 3fzg_A 36 LNDFYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNE----NEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLN 106 (200)
T ss_dssp HHHHHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCS----SCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEEC
T ss_pred HHHHHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhc----CCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEec
Confidence 455566666665 36899999999999987666554 788999999999999999999999999886555577
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
..... .+++||+|++.--++.. +..+..+..+.+.|+|||+++-
T Consensus 107 ~~~~~---~~~~~DvVLa~k~LHlL---------------------~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 107 KESDV---YKGTYDVVFLLKMLPVL---------------------KQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp CHHHH---TTSEEEEEEEETCHHHH---------------------HHTTCCHHHHHHTCEEEEEEEE
T ss_pred ccccC---CCCCcChhhHhhHHHhh---------------------hhhHHHHHHHHHHhCCCCEEEE
Confidence 65542 35789999995433211 0112335578899999999886
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.56 E-value=4.1e-14 Score=115.70 Aligned_cols=105 Identities=22% Similarity=0.269 Sum_probs=85.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhc--C--CC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRL--A--GL 115 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~--~--~~ 115 (256)
++.+|||+|||+|..++.++..+. ++++++++|+++.+++.|++++...++.. +++.+|+.+.+.... + ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLP---PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSC---TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 578999999999999888887632 26799999999999999999999888753 899999877654432 2 68
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
||+|+++.+. ..+..+++.+.++|+|||++++..
T Consensus 149 fD~V~~d~~~------------------------~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADK------------------------RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCG------------------------GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred cCEEEECCCH------------------------HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9999997541 115688999999999999999843
No 199
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.56 E-value=8.2e-15 Score=128.29 Aligned_cols=104 Identities=20% Similarity=0.276 Sum_probs=84.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++++|||+|||+|.+++.+++. + ..+|+|+|++ .+++.|++++..+++.. +++++|+.+...+ ++||+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~----g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~ 132 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA----G-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP---EKVDV 132 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT----T-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc----C-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceE
Confidence 57899999999999998888775 2 2389999999 99999999999998864 8999999876432 78999
Q ss_pred EEECCC-CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 119 MVVNPP-YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 119 Ii~npP-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
|++++. |+..... ....++..+.++|||||++++.
T Consensus 133 Iv~~~~~~~l~~e~-------------------~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 133 IISEWMGYFLLRES-------------------MFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEECCCBTTBTTTC-------------------THHHHHHHHHHHEEEEEEEESS
T ss_pred EEEcChhhcccchH-------------------HHHHHHHHHHhhCCCCeEEEEe
Confidence 999873 3322111 1577899999999999999763
No 200
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.56 E-value=2.1e-14 Score=122.09 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=77.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-------ceEEEcchh------hch
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-------ADLINTDIA------SGL 108 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-------~~~~~~d~~------~~~ 108 (256)
++.+|||+|||+|..+..++.. ..++|+|+|+|+.|++.|+++....+.. .++.+.|+. +..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-----~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~ 122 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-----EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVR 122 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhc-----CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhh
Confidence 4789999999999754433332 2468999999999999999988765542 256677762 211
Q ss_pred hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 109 EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 109 ~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
..+.+++||+|+|...++...+. . . ...+++++.++|||||++++.++.
T Consensus 123 ~~~~~~~FD~V~~~~~lhy~~~~--------------~-~---~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 123 EVFYFGKFNIIDWQFAIHYSFHP--------------R-H---YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp TTCCSSCEEEEEEESCGGGTCST--------------T-T---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccCCCeeEEEECchHHHhCCH--------------H-H---HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 12335789999996443211110 0 0 468899999999999999987763
No 201
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.56 E-value=5.4e-14 Score=121.48 Aligned_cols=103 Identities=21% Similarity=0.320 Sum_probs=82.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++.+++. +..+|+|+|+++ +++.|++++..+++. .+++.+|+.+. ++.+++||+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-----g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~ 134 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-----GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV--HLPVEKVDV 134 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-----TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS--CCSCSCEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-----CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh--cCCCCcEEE
Confidence 57889999999999998877764 234899999997 999999999999873 38999999875 233478999
Q ss_pred EEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211 119 MVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 119 Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 170 (256)
|++++ +|..... .....++..+.++|||||+++
T Consensus 135 Ivs~~~~~~l~~~-------------------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFE-------------------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTT-------------------CHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhhccCH-------------------HHHHHHHHHHHhhcCCCcEEE
Confidence 99987 4432211 125678999999999999998
No 202
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=2.5e-14 Score=115.58 Aligned_cols=134 Identities=13% Similarity=0.093 Sum_probs=92.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH----HHcCCcc-eEEEcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL----EAHNVHA-DLINTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~----~~~~~~~-~~~~~d~~~~~~~~~~~~ 115 (256)
.++.+|||+|||+|.++..++.. +|+++|+|+|+++.|++.+.++. ...+.+. .++++|+.+. ++.++.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~----~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l--~~~~~~ 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQ----NPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL--PPLSGV 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHH----CTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC--CSCCCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC--CCCCCC
Confidence 57899999999999999888887 77889999999999888643333 2345544 8999999885 233455
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC--------------C---
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------D--- 178 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------~--- 178 (256)
|.|+...++... ...+... ...++.++.++|||||++++...... .
T Consensus 100 -d~v~~~~~~~~~----------~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (218)
T 3mq2_A 100 -GELHVLMPWGSL----------LRGVLGS------SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDS 162 (218)
T ss_dssp -EEEEEESCCHHH----------HHHHHTS------SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHH
T ss_pred -CEEEEEccchhh----------hhhhhcc------HHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHH
Confidence 888766554210 0001100 15789999999999999998542110 1
Q ss_pred -HHHHHHHHHHcCCcEEEEE
Q 025211 179 -PSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 179 -~~~~~~~~~~~g~~~~~~~ 197 (256)
.+.+...+.+.||....+.
T Consensus 163 ~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 163 ADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp HHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCceeee
Confidence 1246678888898865543
No 203
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=4.7e-14 Score=115.91 Aligned_cols=110 Identities=18% Similarity=0.218 Sum_probs=85.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhh--hc-CCCcc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEK--RL-AGLVD 117 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~--~~-~~~fD 117 (256)
.++.+|||+|||+|.++..++.. ++ +|+|+|+++.+++.++++.. ....+++++|+.+.... +. ...||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~----~~--~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQF----FP--RVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHH----SS--CEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHh----CC--CEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccccccccccCcc
Confidence 46789999999999999888886 33 89999999999999998762 22348999998875322 11 13499
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
+|+++..+++.+... ...++..+.++|||||+++++.....
T Consensus 127 ~v~~~~~~~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEK-------------------RELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EEEEESSSTTSCGGG-------------------HHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EEEEcchhhcCCHHH-------------------HHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 999987776654322 57899999999999999988776544
No 204
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.54 E-value=7.7e-14 Score=118.63 Aligned_cols=111 Identities=15% Similarity=0.168 Sum_probs=82.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH--cCC---cceEEEcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA--HNV---HADLINTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~--~~~---~~~~~~~d~~~~~~~~~~~~ 115 (256)
..+++|||+|||+|.++.++++. .+..+|+++|+++.+++.|++++.. .++ ..+++.+|+.+.+.. .+++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~ 168 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH----PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDA 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSC
T ss_pred CCCCEEEEECCCchHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-CCCC
Confidence 35689999999999987766554 4567999999999999999999865 233 348999999876543 3578
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
||+|++++|....+.. ......+++.+.++|+|||++++..
T Consensus 169 fD~Ii~d~~~~~~~~~-----------------~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 169 FDVIITDSSDPMGPAE-----------------SLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEEECC----------------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCCCCCcch-----------------hhhHHHHHHHHHhccCCCeEEEEec
Confidence 9999998874321110 0113578999999999999999865
No 205
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.54 E-value=1.2e-13 Score=118.76 Aligned_cols=139 Identities=16% Similarity=0.204 Sum_probs=105.0
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccEEEE
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++++...++. .+++.+|+.+.. +++||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQA----EPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEV----PSNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHH----CTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC----CSSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHHHH----CCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC----CCCCCEEEE
Confidence 89999999999998888776 77889999999 99999999998766543 489999987732 357999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC------------------------C
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA------------------------N 177 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------~ 177 (256)
.-.+++.++. ....+++.+.+.|+|||++++..... .
T Consensus 240 ~~vl~~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (334)
T 2ip2_A 240 SRIIGDLDEA-------------------ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHR 300 (334)
T ss_dssp ESCGGGCCHH-------------------HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCC
T ss_pred chhccCCCHH-------------------HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCC
Confidence 7665433321 24688999999999999999975321 1
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 178 DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 178 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
..+++.+++++.||....+..... ...++++.+
T Consensus 301 t~~e~~~ll~~aGf~~~~~~~~~~---~~~~i~~~~ 333 (334)
T 2ip2_A 301 TTEEVVDLLGRGGFAVERIVDLPM---ETRMIVAAR 333 (334)
T ss_dssp BHHHHHHHHHHTTEEEEEEEEETT---TEEEEEEEE
T ss_pred CHHHHHHHHHHCCCceeEEEECCC---CCEEEEEEe
Confidence 245678888889998777665422 245555543
No 206
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3.7e-14 Score=114.21 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=89.4
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d 103 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++... .++.+|+++|+++.+++.+++++...+... .++.+|
T Consensus 63 ~~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 136 (215)
T 2yxe_A 63 IHMVGMMCELLD---LKPGMKVLEIGTGCGYHAAVTAEIV---GEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD 136 (215)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHH---CTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC
T ss_pred HHHHHHHHHhhC---CCCCCEEEEECCCccHHHHHHHHHh---CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 445556665543 2578899999999999999888874 244699999999999999999998887654 888999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+...... .++||+|+++.++.+. .+.+.++|||||+++++...
T Consensus 137 ~~~~~~~--~~~fD~v~~~~~~~~~---------------------------~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 137 GTLGYEP--LAPYDRIYTTAAGPKI---------------------------PEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GGGCCGG--GCCEEEEEESSBBSSC---------------------------CHHHHHTEEEEEEEEEEESS
T ss_pred cccCCCC--CCCeeEEEECCchHHH---------------------------HHHHHHHcCCCcEEEEEECC
Confidence 8654332 4689999998765321 24678899999999997653
No 207
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.53 E-value=8.6e-14 Score=117.23 Aligned_cols=112 Identities=17% Similarity=0.214 Sum_probs=83.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-----CcceEEEcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-----VHADLINTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~ 115 (256)
.++++|||+|||+|..+.++++. .+..+++++|+++.+++.|++++...+ ...+++.+|+.+.... .+++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~ 151 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKY----KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN-VTNT 151 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH-CCSC
T ss_pred CCCCeEEEEeCCcCHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh-CCCC
Confidence 35689999999999987666543 456799999999999999999876432 2238999999886543 2578
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
||+|+++++....+... + ....+++.+.++|+|||++++...
T Consensus 152 fD~Ii~d~~~~~~~~~~---------l--------~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 152 YDVIIVDSSDPIGPAET---------L--------FNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEEEECCCTTTGGGG---------G--------SSHHHHHHHHHHEEEEEEEEEECC
T ss_pred ceEEEEcCCCCCCcchh---------h--------hHHHHHHHHHHhcCCCcEEEEECC
Confidence 99999987532111100 0 026889999999999999998654
No 208
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.53 E-value=7e-14 Score=127.25 Aligned_cols=189 Identities=13% Similarity=0.081 Sum_probs=119.5
Q ss_pred CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC---------CceEEEEeCCHHHHHH
Q 025211 15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP---------GVQYIATDINPYAVEV 85 (256)
Q Consensus 15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~---------~~~v~giD~~~~~i~~ 85 (256)
..+|+|++...++++.+. +.++.+|+|++||||.+++.+...+.+... ...++|+|+++.++..
T Consensus 197 GqfyTP~~Vv~lmv~l~~-------p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~l 269 (530)
T 3ufb_A 197 GEFYTPRPVVRFMVEVMD-------PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLL 269 (530)
T ss_dssp CCCCCCHHHHHHHHHHHC-------CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHH
T ss_pred ceECCcHHHHHHHHHhhc-------cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHH
Confidence 348999766666665432 246789999999999999998887754332 2479999999999999
Q ss_pred HHHHHHHcCCcc-eEEEcchhhchhh--hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhc
Q 025211 86 TRKTLEAHNVHA-DLINTDIASGLEK--RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKL 162 (256)
Q Consensus 86 a~~~~~~~~~~~-~~~~~d~~~~~~~--~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (256)
|+-|+..++... .+..+|....... ....+||+|++||||............+. .....+ ....+++.+.+.
T Consensus 270 a~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~--~~~~~~---~~~~Fl~~~l~~ 344 (530)
T 3ufb_A 270 VQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPE--DMQTAE---TAMLFLQLIMRK 344 (530)
T ss_dssp HHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCG--GGCCCB---HHHHHHHHHHHH
T ss_pred HHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCch--hcccch---hHHHHHHHHHHH
Confidence 999999999875 7888887653211 12357999999999975433221110000 011111 123456666666
Q ss_pred cc-------cCeEEEEEEeCC----C-CHHHHHHHHHHcCCcE-EEEEec-CC---CCccEEEEEEEecC
Q 025211 163 LS-------KRGWLYLVTLTA----N-DPSQICLQMMEKGYAA-RIVVQR-ST---EEENLHIIKFWRDF 215 (256)
Q Consensus 163 Lk-------pgG~l~~~~~~~----~-~~~~~~~~~~~~g~~~-~~~~~~-~~---~~~~~~l~~~~~~~ 215 (256)
|| +||++.++.|.. . ....+++.+.+.+.-. +.-.+. .. ..-...++.+.|..
T Consensus 345 Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~~l~aII~LP~~~F~~~tgi~t~Il~~~K~~ 414 (530)
T 3ufb_A 345 LKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSG 414 (530)
T ss_dssp BCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHSEEEEEEECCTTTTTTTCCCCEEEEEEESSS
T ss_pred hhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcCEEEEEEECCcccCcCCCCCcEEEEEEECCC
Confidence 65 799999998742 1 2345777776654322 222222 11 12345566666544
No 209
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.53 E-value=7.9e-14 Score=114.38 Aligned_cols=106 Identities=18% Similarity=0.178 Sum_probs=85.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhc------
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRL------ 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~------ 112 (256)
.++.+|||+|||+|..+..++..+. ++.+|+++|+++.+++.|++++...++.. .++.+|+.+..+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP---EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC---TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccc
Confidence 3678999999999999998888732 25799999999999999999999888753 889999877544321
Q ss_pred --------C-CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 --------A-GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 --------~-~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+ ++||+|+++... .....+++.+.++|+|||++++..
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~------------------------~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADK------------------------ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCG------------------------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCH------------------------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 689999997421 115678999999999999999854
No 210
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.53 E-value=1.3e-13 Score=119.40 Aligned_cols=116 Identities=16% Similarity=0.230 Sum_probs=87.8
Q ss_pred HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcc
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTD 103 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d 103 (256)
.+.+.+...+. ..++.+|||+|||+|.+++.+++. +..+|+|+|+++ +++.|++++..+++. .+++.+|
T Consensus 37 ~y~~~i~~~l~---~~~~~~VLDiGcGtG~ls~~la~~-----g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d 107 (348)
T 2y1w_A 37 TYQRAILQNHT---DFKDKIVLDVGCGSGILSFFAAQA-----GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGK 107 (348)
T ss_dssp HHHHHHHHTGG---GTTTCEEEEETCTTSHHHHHHHHT-----TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESC
T ss_pred HHHHHHHhccc---cCCcCEEEEcCCCccHHHHHHHhC-----CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcc
Confidence 33444444432 257899999999999998877764 345999999996 889999999998874 3899999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
+.+... +++||+|++++++.+..... ....+..+.++|||||++++.
T Consensus 108 ~~~~~~---~~~~D~Ivs~~~~~~~~~~~-------------------~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 108 VEEVSL---PEQVDIIISEPMGYMLFNER-------------------MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTTCCC---SSCEEEEEECCCBTTBTTTS-------------------HHHHHHHGGGGEEEEEEEESC
T ss_pred hhhCCC---CCceeEEEEeCchhcCChHH-------------------HHHHHHHHHhhcCCCeEEEEe
Confidence 887532 36899999998765433221 456677889999999999853
No 211
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.53 E-value=5.8e-13 Score=111.65 Aligned_cols=133 Identities=19% Similarity=0.199 Sum_probs=93.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--CC---cceEEEcchhhchhhhcCCCc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--NV---HADLINTDIASGLEKRLAGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~~---~~~~~~~d~~~~~~~~~~~~f 116 (256)
.+++|||+|||+|.++.++++. .+..+|+++|+++.+++.|++++... ++ ..+++.+|+.+.+.. .+++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~f 149 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH----PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQY 149 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC----TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT-CCSCE
T ss_pred CCCEEEEECCchHHHHHHHHhC----CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-CCCCe
Confidence 5789999999999987666543 45579999999999999999987642 33 238999999876543 35789
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-CCH---HHHHHHHHHcCCc
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-NDP---SQICLQMMEKGYA 192 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~---~~~~~~~~~~g~~ 192 (256)
|+|++++|....+... + ....+++.+.+.|+|||++++...+. ... ..+.+.+++. |.
T Consensus 150 D~Ii~d~~~~~~~~~~---------l--------~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~ 211 (275)
T 1iy9_A 150 DVIMVDSTEPVGPAVN---------L--------FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FP 211 (275)
T ss_dssp EEEEESCSSCCSCCCC---------C--------STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CS
T ss_pred eEEEECCCCCCCcchh---------h--------hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CC
Confidence 9999998763221100 0 02478899999999999999864332 122 2344455544 55
Q ss_pred EEEEE
Q 025211 193 ARIVV 197 (256)
Q Consensus 193 ~~~~~ 197 (256)
....+
T Consensus 212 ~v~~~ 216 (275)
T 1iy9_A 212 ITKLY 216 (275)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 54444
No 212
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.53 E-value=3.8e-14 Score=121.27 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=89.4
Q ss_pred HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcch
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDI 104 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~ 104 (256)
.+.+.+++.+. ..++.+|||+|||+|.+++.+++... .+.+|+|+|+++++++.|++++..+++.. +++.+|+
T Consensus 62 ~~~~~l~~~l~---~~~~~~VLDiGcG~G~~~~~la~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~ 135 (317)
T 1dl5_A 62 SLMALFMEWVG---LDKGMRVLEIGGGTGYNAAVMSRVVG---EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG 135 (317)
T ss_dssp HHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred HHHHHHHHhcC---CCCcCEEEEecCCchHHHHHHHHhcC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh
Confidence 55566666553 25789999999999999998888732 13679999999999999999999888765 8999999
Q ss_pred hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
.+.... .++||+|++++++.+. .+.+.+.|||||++++...
T Consensus 136 ~~~~~~--~~~fD~Iv~~~~~~~~---------------------------~~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 136 YYGVPE--FSPYDVIFVTVGVDEV---------------------------PETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGCCGG--GCCEEEEEECSBBSCC---------------------------CHHHHHHEEEEEEEEEEBC
T ss_pred hhcccc--CCCeEEEEEcCCHHHH---------------------------HHHHHHhcCCCcEEEEEEC
Confidence 875432 4689999998876421 1456779999999999653
No 213
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=2.8e-14 Score=118.14 Aligned_cols=103 Identities=23% Similarity=0.280 Sum_probs=81.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.+++++ .... ...++.+|+.+. ++.+++||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~--~~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR------GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAI--PLPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT------TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSC--CSCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC------CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccC--CCCCCCeeEE
Confidence 46789999999999988776654 468999999999999999987 3222 348999998765 2345789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+++..+++.++ ...++.++.++|+|||++++..
T Consensus 109 ~~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 109 IVVHLWHLVPD---------------------WPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp EEESCGGGCTT---------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhcCC---------------------HHHHHHHHHHHCCCCcEEEEEe
Confidence 99766554332 4688999999999999999863
No 214
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.52 E-value=1.2e-13 Score=117.94 Aligned_cols=110 Identities=16% Similarity=0.181 Sum_probs=80.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--CC---cceEEEcchhhchhhhcCCCc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--NV---HADLINTDIASGLEKRLAGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~~---~~~~~~~d~~~~~~~~~~~~f 116 (256)
.+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... ++ ..+++.+|+.+.+.. .+++|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~f 182 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKH----ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEF 182 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTC----TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCE
T ss_pred CCCEEEEEcCCcCHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh-cCCCc
Confidence 5689999999999987766654 45679999999999999999988653 22 348999999886543 35789
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+++++....+.. . .....+++.+.++|+|||++++..
T Consensus 183 D~Ii~d~~~~~~~~~----------------~-l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 183 DVIITDSSDPVGPAE----------------S-LFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEECCC------------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCCCCCCcch----------------h-hhHHHHHHHHHhhcCCCeEEEEEC
Confidence 999998753211000 0 012688999999999999999854
No 215
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=5.2e-14 Score=114.61 Aligned_cols=112 Identities=24% Similarity=0.202 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. . .+|+|+|+++.+++.+++++..++ ..+++.+|+
T Consensus 56 ~~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~----~--~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~ 125 (231)
T 1vbf_A 56 LNLGIFMLDELD---LHKGQKVLEIGTGIGYYTALIAEI----V--DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDG 125 (231)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH----S--SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCG
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEcCCCCHHHHHHHHH----c--CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCc
Confidence 455666666653 257789999999999999888876 2 589999999999999999987766 558999998
Q ss_pred hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
.+... ..++||+|+++.++.+. ...+.++|+|||++++..+.
T Consensus 126 ~~~~~--~~~~fD~v~~~~~~~~~---------------------------~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 126 TLGYE--EEKPYDRVVVWATAPTL---------------------------LCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GGCCG--GGCCEEEEEESSBBSSC---------------------------CHHHHHTEEEEEEEEEEECS
T ss_pred ccccc--cCCCccEEEECCcHHHH---------------------------HHHHHHHcCCCcEEEEEEcC
Confidence 87432 24789999998765321 23577899999999997653
No 216
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.52 E-value=7.2e-14 Score=121.11 Aligned_cols=105 Identities=15% Similarity=0.234 Sum_probs=84.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++++|||+|||+|.+++.+++. +..+|+|+|+++ +++.|++++..+++.. +++++|+.+. ++..++||+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-----g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~ 136 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-----GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV--ELPVEKVDI 136 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-----TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CCSSSCEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-----CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc--cCCCCceEE
Confidence 47899999999999998887775 345999999995 9999999999998874 8999999887 333578999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
|+++++.+..... .....++..+.++|||||+++.
T Consensus 137 Iis~~~~~~l~~~------------------~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYE------------------SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBT------------------CCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEccccccccCc------------------hhHHHHHHHHHHhCCCCCEEcc
Confidence 9998753322111 1157889999999999999864
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.52 E-value=3.4e-13 Score=109.99 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=78.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. ++ +++|+|+++.+++.++++.. ..+++.+|+.+.. . +++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~----~~--~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~--~-~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKE----FG--DTAGLELSEDMLTHARKRLP----DATLHQGDMRDFR--L-GRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH----HS--EEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCC--C-SSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHh----CC--cEEEEeCCHHHHHHHHHhCC----CCEEEECCHHHcc--c-CCCCcEEE
Confidence 46789999999999998888876 22 89999999999999988641 2488999987753 2 57899999
Q ss_pred ECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 121 VNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 121 ~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|.. .+.+... ......+++.+.++|+|||++++..
T Consensus 106 ~~~~~~~~~~~------------------~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 106 SMFSSVGYLKT------------------TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp ECTTGGGGCCS------------------HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EcCchHhhcCC------------------HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 632 3222211 1235788999999999999999853
No 218
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.52 E-value=1.3e-13 Score=110.65 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=80.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
++.+|||+|||+|.++..+ +. +++|+|+++.+++.++++. ....++++|+.+. ++.+++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---------~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~--~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---------PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEAL--PFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---------CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSC--CSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---------CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccC--CCCCCcEEEEE
Confidence 7899999999999975443 34 8999999999999998875 2347888888765 33457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND 178 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (256)
++..+.+.++ ...+++++.++|||||++++..+....
T Consensus 101 ~~~~l~~~~~---------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 101 LFTTLEFVED---------------------VERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp EESCTTTCSC---------------------HHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred EcChhhhcCC---------------------HHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 9877655432 468899999999999999998875543
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.52 E-value=1.9e-13 Score=115.83 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=89.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH--cCC---cceEEEcchhhchhhhcCCCc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA--HNV---HADLINTDIASGLEKRLAGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~--~~~---~~~~~~~d~~~~~~~~~~~~f 116 (256)
.+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.. .++ ..+++.+|+.+.... .+++|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~f 164 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKH----DSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-FKNEF 164 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTS----TTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-CSSCE
T ss_pred CCCEEEEEcCCcCHHHHHHHhc----CCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-CCCCc
Confidence 5689999999999987766654 4567999999999999999999764 222 348999998876543 35789
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-CCH---HHHHHHHHHcCCc
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-NDP---SQICLQMMEKGYA 192 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~---~~~~~~~~~~g~~ 192 (256)
|+|++|+|........ . .....+++.+.++|+|||++++...+. ... ..+.+.+.+. |.
T Consensus 165 D~Ii~d~~~~~~~~~~--------~--------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~ 227 (296)
T 1inl_A 165 DVIIIDSTDPTAGQGG--------H--------LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FP 227 (296)
T ss_dssp EEEEEEC--------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CS
T ss_pred eEEEEcCCCcccCchh--------h--------hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CC
Confidence 9999987632010000 0 013678999999999999999965432 112 2445555555 44
Q ss_pred EEE
Q 025211 193 ARI 195 (256)
Q Consensus 193 ~~~ 195 (256)
...
T Consensus 228 ~v~ 230 (296)
T 1inl_A 228 ITR 230 (296)
T ss_dssp EEE
T ss_pred ceE
Confidence 433
No 220
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=6.5e-14 Score=113.81 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=83.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhc-ccCCCceEEEEeCCHHHHHHHHHHHHHcC-----Cc-ceEEEcchhhchhh--h
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLG-QEVPGVQYIATDINPYAVEVTRKTLEAHN-----VH-ADLINTDIASGLEK--R 111 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~-~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----~~-~~~~~~d~~~~~~~--~ 111 (256)
.++.+|||+|||+|.++..+++.+. ...+.++|+++|+++.+++.|++++..++ .. .+++.+|+.+.... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 4779999999999999988888742 01145799999999999999999998887 33 38999998875310 1
Q ss_pred cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 112 LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 112 ~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
..++||+|+++.++. .+++.+.+.|+|||++++..+.
T Consensus 159 ~~~~fD~I~~~~~~~---------------------------~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS---------------------------ELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHCCEEEEEECSBBS---------------------------SCCHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchH---------------------------HHHHHHHHhcCCCcEEEEEEcc
Confidence 246899999987642 2356778899999999997653
No 221
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.51 E-value=6.3e-14 Score=114.70 Aligned_cols=115 Identities=21% Similarity=0.209 Sum_probs=87.5
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d 103 (256)
..++..+++.+. ..++.+|||+|||+|.++..+++.. + .+|+++|+++.+++.|++++...++.. .++.+|
T Consensus 77 ~~~~~~~~~~l~---~~~~~~vLdiG~G~G~~~~~la~~~----~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 148 (235)
T 1jg1_A 77 PHMVAIMLEIAN---LKPGMNILEVGTGSGWNAALISEIV----K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGD 148 (235)
T ss_dssp HHHHHHHHHHHT---CCTTCCEEEECCTTSHHHHHHHHHH----C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEeCCcCHHHHHHHHHh----C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 445566666553 2577899999999999999888873 3 589999999999999999999888754 888999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
+...... ...||+|+++.+... +...+.+.|+|||++++..+..
T Consensus 149 ~~~~~~~--~~~fD~Ii~~~~~~~---------------------------~~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 149 GSKGFPP--KAPYDVIIVTAGAPK---------------------------IPEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GGGCCGG--GCCEEEEEECSBBSS---------------------------CCHHHHHTEEEEEEEEEEECSS
T ss_pred cccCCCC--CCCccEEEECCcHHH---------------------------HHHHHHHhcCCCcEEEEEEecC
Confidence 7433322 245999999865421 1235678999999999976543
No 222
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.51 E-value=1e-13 Score=122.74 Aligned_cols=126 Identities=15% Similarity=0.245 Sum_probs=93.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--e-EEEcchhhchhhhcCCCcc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--D-LINTDIASGLEKRLAGLVD 117 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~-~~~~d~~~~~~~~~~~~fD 117 (256)
.++.+|||+|||+|.++..++.. +.+++|+|+++.+++.|+++ +... . +...+.... ++.+++||
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~------g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l--~~~~~~fD 173 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA------GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDV--RRTEGPAN 173 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT------TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHH--HHHHCCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc------CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhc--ccCCCCEE
Confidence 56789999999999988777664 45999999999999998875 3332 2 222233222 23357999
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC-------------------CCC
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT-------------------AND 178 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------------------~~~ 178 (256)
+|+++..+.+.++ ...+++.+.++|||||++++..+. ...
T Consensus 174 ~I~~~~vl~h~~d---------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 174 VIYAANTLCHIPY---------------------VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp EEEEESCGGGCTT---------------------HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred EEEECChHHhcCC---------------------HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 9999876654432 578999999999999999997653 113
Q ss_pred HHHHHHHHHHcCCcEEEEEec
Q 025211 179 PSQICLQMMEKGYAARIVVQR 199 (256)
Q Consensus 179 ~~~~~~~~~~~g~~~~~~~~~ 199 (256)
..++...+.+.||....+...
T Consensus 233 ~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEEc
Confidence 468899999999988766654
No 223
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.51 E-value=6.2e-14 Score=113.83 Aligned_cols=103 Identities=20% Similarity=0.202 Sum_probs=82.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC------cceEEEcchhhchhhhcCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV------HADLINTDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~~ 114 (256)
.++.+|||+|||+|.++..+++.++ +..+|+++|+++.+++.+++++..++. ...++.+|+..... ..+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~ 150 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVG---CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA--EEA 150 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG--GGC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhC---CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc--cCC
Confidence 5788999999999999988887752 446999999999999999999988664 34888999875432 246
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
+||+|+++.++. .+++.+.+.|||||++++...+
T Consensus 151 ~fD~i~~~~~~~---------------------------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 151 PYDAIHVGAAAP---------------------------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CEEEEEECSBBS---------------------------SCCHHHHHTEEEEEEEEEEESC
T ss_pred CcCEEEECCchH---------------------------HHHHHHHHhcCCCcEEEEEEec
Confidence 899999987642 2346778899999999997653
No 224
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.50 E-value=2.1e-13 Score=117.23 Aligned_cols=104 Identities=17% Similarity=0.284 Sum_probs=82.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.+++.+++. +..+|+|+|++ .+++.|++++..+++.. +++.+|+.+.. ...++||+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-----g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~ 108 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-----GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--LPFPKVDI 108 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-----CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--CSSSCEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHC-----CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--CCCCcccE
Confidence 46789999999999998877764 23489999999 59999999999998753 89999988763 22478999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 170 (256)
|+++++.+..... .....++..+.++|||||+++
T Consensus 109 Ivs~~~~~~l~~~------------------~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 109 IISEWMGYFLLYE------------------SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEECCCBTTBSTT------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEeCchhhcccH------------------HHHHHHHHHHHhhcCCCeEEE
Confidence 9999874332111 015678899999999999997
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.50 E-value=8.8e-13 Score=112.62 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=83.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH--cC----CcceEEEcchhhchhhhcCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA--HN----VHADLINTDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~--~~----~~~~~~~~d~~~~~~~~~~~ 114 (256)
..+++|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.. .+ ...+++.+|+.+.+.. .++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 150 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKH----PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEE 150 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS----TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhc----CCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh-cCC
Confidence 35689999999999987666553 4567999999999999999998764 12 2348999999886543 357
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+||+|+++++....... +.. ......+++.+.++|+|||++++..
T Consensus 151 ~fD~Ii~d~~~~~~~~~------~~~--------~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 151 RYDVVIIDLTDPVGEDN------PAR--------LLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CEEEEEEECCCCBSTTC------GGG--------GGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCcccccC------cch--------hccHHHHHHHHHHhcCCCcEEEEEc
Confidence 89999999765320000 000 0013688999999999999999864
No 226
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.50 E-value=2.5e-13 Score=120.16 Aligned_cols=119 Identities=13% Similarity=0.095 Sum_probs=86.1
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH-------HHHHHHcCC--
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT-------RKTLEAHNV-- 95 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a-------~~~~~~~~~-- 95 (256)
..++..+++.+. ..++.+|||+|||+|.+++.+++.. +...|+|+|+++.+++.| ++++..+++
T Consensus 228 p~~v~~ml~~l~---l~~g~~VLDLGCGsG~la~~LA~~~----g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 228 PNFLSDVYQQCQ---LKKGDTFMDLGSGVGNCVVQAALEC----GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEESCTTSHHHHHHHHHH----CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEeCCCcCHHHHHHHHHC----CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCC
Confidence 344455555543 2578999999999999999988873 345899999999999998 888888883
Q ss_pred cc-eEEEcchhhchhh--hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 96 HA-DLINTDIASGLEK--RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 96 ~~-~~~~~d~~~~~~~--~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
.. +++++|......+ ...++||+|++|...+. .....++..+.+.|||||++++.
T Consensus 301 ~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~----------------------~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFD----------------------EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCC----------------------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEEEcCccccccccccccCCCCEEEEeCcccc----------------------ccHHHHHHHHHHhCCCCeEEEEe
Confidence 33 7777754321101 11368999999754321 12457788999999999999985
No 227
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.50 E-value=3.7e-13 Score=117.77 Aligned_cols=128 Identities=18% Similarity=0.161 Sum_probs=94.4
Q ss_pred CCccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCC-ceEEEEeCCHHHHHHHHHHHHH
Q 025211 15 PEVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPG-VQYIATDINPYAVEVTRKTLEA 92 (256)
Q Consensus 15 ~~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~-~~v~giD~~~~~i~~a~~~~~~ 92 (256)
..+|.|... .+.++..++..+... ..++.+|||++||+|.+++.++..+ .+ ..|+++|+++.+++.+++|++.
T Consensus 25 ~~Ffn~~~~~nR~l~~~~~~~~~~~-~~~g~~VLDlfaGtG~~sl~aa~~~----~ga~~V~avDi~~~av~~~~~N~~~ 99 (392)
T 3axs_A 25 PVFYNPRMRVNRDLAVLGLEYLCKK-LGRPVKVADPLSASGIRAIRFLLET----SCVEKAYANDISSKAIEIMKENFKL 99 (392)
T ss_dssp CSSCCGGGHHHHHHHHHHHHHHHHH-HCSCEEEEESSCTTSHHHHHHHHHC----SCEEEEEEECSCHHHHHHHHHHHHH
T ss_pred CEEEcCCcHHHHHHHHHHHHHHhhc-cCCCCEEEECCCcccHHHHHHHHhC----CCCCEEEEEECCHHHHHHHHHHHHH
Confidence 346656544 333333223322100 1367899999999999999998863 23 4899999999999999999999
Q ss_pred cCCc---ceEEEcchhhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeE
Q 025211 93 HNVH---ADLINTDIASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGW 168 (256)
Q Consensus 93 ~~~~---~~~~~~d~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 168 (256)
|++. .+++++|+.+.+. .. .++||+|++|| |.. ...++..+.++|++||+
T Consensus 100 Ngl~~~~v~v~~~Da~~~l~~~~-~~~fD~V~lDP-~g~------------------------~~~~l~~a~~~Lk~gGl 153 (392)
T 3axs_A 100 NNIPEDRYEIHGMEANFFLRKEW-GFGFDYVDLDP-FGT------------------------PVPFIESVALSMKRGGI 153 (392)
T ss_dssp TTCCGGGEEEECSCHHHHHHSCC-SSCEEEEEECC-SSC------------------------CHHHHHHHHHHEEEEEE
T ss_pred hCCCCceEEEEeCCHHHHHHHhh-CCCCcEEEECC-CcC------------------------HHHHHHHHHHHhCCCCE
Confidence 9985 5899999988765 43 46799999998 310 24578888889999998
Q ss_pred EEEEE
Q 025211 169 LYLVT 173 (256)
Q Consensus 169 l~~~~ 173 (256)
+++++
T Consensus 154 l~~t~ 158 (392)
T 3axs_A 154 LSLTA 158 (392)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88855
No 228
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.50 E-value=3.5e-13 Score=113.37 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=81.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--CC----------cceEEEcchhhch
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--NV----------HADLINTDIASGL 108 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~~----------~~~~~~~d~~~~~ 108 (256)
..+.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++ .. ++ ..+++.+|+.+.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-----~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l 147 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-----DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFI 147 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-----CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-----CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHh
Confidence 35789999999999987655543 4569999999999999999988 33 22 2389999988765
Q ss_pred hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 109 EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 109 ~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
.. +++||+|++++|....+... .....+++.+.++|+|||++++...
T Consensus 148 ~~--~~~fD~Ii~d~~~~~~~~~~-----------------l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 148 KN--NRGFDVIIADSTDPVGPAKV-----------------LFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HH--CCCEEEEEEECCCCC----------------------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc--cCCeeEEEECCCCCCCcchh-----------------hhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 44 57899999998753211000 0126789999999999999998654
No 229
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=1.2e-12 Score=104.23 Aligned_cols=128 Identities=9% Similarity=0.096 Sum_probs=84.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCC--CceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhch---------
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVP--GVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGL--------- 108 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~--~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~--------- 108 (256)
.++.+|||+|||+|.++..+++. .+ +++|+|+|+++.+ .. ...++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~----~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILER----TKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHH----TTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHH----cCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccc
Confidence 46789999999999999888887 44 5799999999831 11 2378888887653
Q ss_pred --------------hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 109 --------------EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 109 --------------~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
..+.+++||+|+++++++...... .+.. ........++..+.++|||||++++...
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~---~d~~-------~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKI---DDHL-------NSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHH---HHHH-------HHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcc---cCHH-------HHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 012346899999997654321100 0000 0011234578899999999999998666
Q ss_pred CCCCHHHHHHHHHHcCCcEE
Q 025211 175 TANDPSQICLQMMEKGYAAR 194 (256)
Q Consensus 175 ~~~~~~~~~~~~~~~g~~~~ 194 (256)
......++...+.. .|...
T Consensus 156 ~~~~~~~l~~~l~~-~f~~v 174 (201)
T 2plw_A 156 LGSQTNNLKTYLKG-MFQLV 174 (201)
T ss_dssp CSTTHHHHHHHHHT-TEEEE
T ss_pred CCCCHHHHHHHHHH-HHheE
Confidence 55555666666654 35443
No 230
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.49 E-value=2.3e-13 Score=127.02 Aligned_cols=122 Identities=23% Similarity=0.171 Sum_probs=91.3
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccC-CCceEEEEeCCHHHHHHHHHHHHHc------CCc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEV-PGVQYIATDINPYAVEVTRKTLEAH------NVH 96 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~-~~~~v~giD~~~~~i~~a~~~~~~~------~~~ 96 (256)
....++++++.+.. .++.+|||+|||+|.+++.+++. + +..+|+|+|+++.+++.|++++... +..
T Consensus 706 ~eqRle~LLelL~~---~~g~rVLDVGCGTG~lai~LAr~----g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~ 778 (950)
T 3htx_A 706 SKQRVEYALKHIRE---SSASTLVDFGCGSGSLLDSLLDY----PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK 778 (950)
T ss_dssp HHHHHHHHHHHHHH---SCCSEEEEETCSSSHHHHHHTSS----CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS
T ss_pred HHHHHHHHHHHhcc---cCCCEEEEECCCCCHHHHHHHHh----CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC
Confidence 45556666666542 47899999999999987666554 4 4469999999999999999977642 333
Q ss_pred -ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 97 -ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 97 -~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
.+++++|+.+.. ...++||+|+++..+.+.++. ....+++.+.++|||| .+++.++
T Consensus 779 nVefiqGDa~dLp--~~d~sFDlVV~~eVLeHL~dp-------------------~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 779 SATLYDGSILEFD--SRLHDVDIGTCLEVIEHMEED-------------------QACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEEEEESCTTSCC--TTSCSCCEEEEESCGGGSCHH-------------------HHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred ceEEEECchHhCC--cccCCeeEEEEeCchhhCChH-------------------HHHHHHHHHHHHcCCC-EEEEEec
Confidence 389999998763 345789999997666544332 1457899999999999 7777654
No 231
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=8.4e-14 Score=114.22 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=84.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc--hhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG--LEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~fD~I 119 (256)
++.+|||+|||+|..++.+++.+...+++++|+|+|+++.+++.|+. .....+++++|+.+. ++.....+||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 46899999999999999888863222467899999999999988761 122348999998874 222223479999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhh-ccccCeEEEEEEe----CCCCHHHHHHHHHHc
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADK-LLSKRGWLYLVTL----TANDPSQICLQMMEK 189 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~LkpgG~l~~~~~----~~~~~~~~~~~~~~~ 189 (256)
+++.... ....++..+.+ +|||||++++... .......+.+++++.
T Consensus 157 ~~d~~~~------------------------~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~ 207 (236)
T 2bm8_A 157 FIDNAHA------------------------NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAF 207 (236)
T ss_dssp EEESSCS------------------------SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTT
T ss_pred EECCchH------------------------hHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhC
Confidence 9865410 14678899996 9999999998431 011223556666655
No 232
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=1.2e-13 Score=114.72 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=78.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++.+|||+|||+|.++..++.. +.+++|+|+++.+++.++++.. . .++.+|+.+.. +.+++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~----~-~~~~~d~~~~~--~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER------GFEVVLVDPSKEMLEVAREKGV----K-NVVEAKAEDLP--FPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHHTC----S-CEEECCTTSCC--SCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc------CCeEEEEeCCHHHHHHHHhhcC----C-CEEECcHHHCC--CCCCCEEEEEE
Confidence 6789999999999988766654 4589999999999999988753 1 38888887652 34578999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
..+..+... ....+++++.++|||||++++..++
T Consensus 121 ~~~~~~~~~--------------------~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 121 LGDVLSYVE--------------------NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CSSHHHHCS--------------------CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cchhhhccc--------------------cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 643321110 0468899999999999999997764
No 233
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.48 E-value=1.4e-12 Score=109.28 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=84.8
Q ss_pred CCCEEEEecccc---cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh---------
Q 025211 42 HPVLCMEVGCGS---GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--------- 109 (256)
Q Consensus 42 ~~~~VLDlGcG~---G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--------- 109 (256)
...+|||+|||+ |.++..+... .|+++|+++|+|+.|++.|++++... -..+++.+|+.+...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~----~p~~~v~~vD~sp~~l~~Ar~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV----NPDARVVYVDIDPMVLTHGRALLAKD-PNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH----CTTCEEEEEESSHHHHHHHHHHHTTC-TTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh----CCCCEEEEEECChHHHHHHHHhcCCC-CCeEEEEeeCCCchhhhccchhhc
Confidence 458999999999 9875444443 67889999999999999999987432 234899999876421
Q ss_pred hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 110 KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 110 ~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
.+...+||+|+++..+++.++.+ ...+++++.+.|+|||++++......
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~~-------------------~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPDV-------------------VDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTTT-------------------HHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred cCCCCCCEEEEEechhhhCCcHH-------------------HHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 11125899999987766544422 57899999999999999999876553
No 234
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.48 E-value=2.4e-13 Score=115.93 Aligned_cols=121 Identities=19% Similarity=0.201 Sum_probs=87.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-------C-cceEEEcchhhchh--hh
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-------V-HADLINTDIASGLE--KR 111 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-------~-~~~~~~~d~~~~~~--~~ 111 (256)
++.+|||+|||+|.++..++.. +..+++|+|+++.+++.|+++....+ . ...++++|+.+... ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-----RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhc-----CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhc
Confidence 6789999999999987766652 35699999999999999999887542 2 34899999887531 12
Q ss_pred --cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHH
Q 025211 112 --LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMM 187 (256)
Q Consensus 112 --~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 187 (256)
.+++||+|+++..++.... .......++.++.++|||||++++.++.. .++...+.
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~-----------------~~~~~~~~l~~~~~~LkpgG~li~~~~~~---~~l~~~~~ 166 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCHYSFE-----------------SYEQADMMLRNACERLSPGGYFIGTTPNS---FELIRRLE 166 (313)
T ss_dssp SSTTCCEEEEEEETCGGGGGG-----------------SHHHHHHHHHHHHTTEEEEEEEEEEEECH---HHHHHHHT
T ss_pred ccCCCCEEEEEEecchhhccC-----------------CHHHHHHHHHHHHHHhCCCcEEEEecCCh---HHHHHHHH
Confidence 2358999999765432200 11235689999999999999999977643 34444443
No 235
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.48 E-value=6.9e-13 Score=106.71 Aligned_cols=126 Identities=16% Similarity=0.228 Sum_probs=92.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..+ ..+++|+|+++. ...++.+|+.+. ++.+++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---------~~~v~~~D~s~~--------------~~~~~~~d~~~~--~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---------RNPVHCFDLASL--------------DPRVTVCDMAQV--PLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---------CSCEEEEESSCS--------------STTEEESCTTSC--SCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh---------hccEEEEeCCCC--------------CceEEEeccccC--CCCCCCEeEEE
Confidence 46789999999999975433 148999999987 237888898774 33457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC--CCHHHHHHHHHHcCCcEEEEEe
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA--NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
++..++. .+ ...++..+.++|+|||+++++.... ....++.+.+.+.||.......
T Consensus 121 ~~~~l~~-~~---------------------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 121 FCLSLMG-TN---------------------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp EESCCCS-SC---------------------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEEC
T ss_pred Eehhccc-cC---------------------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEec
Confidence 9877642 11 5688999999999999999976543 3567899999999998765432
Q ss_pred cCCCCccEEEEEEEecCc
Q 025211 199 RSTEEENLHIIKFWRDFD 216 (256)
Q Consensus 199 ~~~~~~~~~l~~~~~~~~ 216 (256)
. ...+.++.++|...
T Consensus 179 ~---~~~~~~~~~~k~~~ 193 (215)
T 2zfu_A 179 T---NSHFFLFDFQKTGP 193 (215)
T ss_dssp C---STTCEEEEEEECSS
T ss_pred C---CCeEEEEEEEecCc
Confidence 2 23345566666543
No 236
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.47 E-value=1.6e-12 Score=112.76 Aligned_cols=145 Identities=12% Similarity=0.148 Sum_probs=107.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
....+|+|+|||+|.+++.+++. +|+.+++..|. |.+++.|++++...+.+ .+++.+|+.+... ..+|++
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~----~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~----~~~D~~ 248 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSL----YPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL----PEADLY 248 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHH----CSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC----CCCSEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHh----CCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC----CCceEE
Confidence 35689999999999998888887 89999999997 88999999887654433 3899999876522 357999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------- 176 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------- 176 (256)
++.-.++..+++ ....+|+++.+.|+|||+++++....
T Consensus 249 ~~~~vlh~~~d~-------------------~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g 309 (353)
T 4a6d_A 249 ILARVLHDWADG-------------------KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEG 309 (353)
T ss_dssp EEESSGGGSCHH-------------------HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSC
T ss_pred EeeeecccCCHH-------------------HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC
Confidence 996554433332 24688999999999999999977421
Q ss_pred --CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEecCc
Q 025211 177 --NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWRDFD 216 (256)
Q Consensus 177 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (256)
+...+..+++++.||+...+.+... ...++.++|+-.
T Consensus 310 ~ert~~e~~~ll~~AGf~~v~v~~~~~---~~~~i~ArKgt~ 348 (353)
T 4a6d_A 310 QERTPTHYHMLLSSAGFRDFQFKKTGA---IYDAILARKGTH 348 (353)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEECCSS---SCEEEEEECCCC
T ss_pred cCCCHHHHHHHHHHCCCceEEEEEcCC---ceEEEEEEecCc
Confidence 1245788899999999888776532 235667777543
No 237
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.47 E-value=2e-13 Score=113.75 Aligned_cols=104 Identities=13% Similarity=0.253 Sum_probs=81.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..++.. .++..++|+|+++.+++.|+++. ....+..+|+.+. ++.+++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~--~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADA----LPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRL--PFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHT----CTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSC--SBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhC--CCCCCceeEEE
Confidence 47889999999999998877775 45679999999999999998764 2347888888764 23457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHH
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQI 182 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 182 (256)
++.. ..++.++.++|||||+++++.+......++
T Consensus 154 ~~~~----------------------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 187 (269)
T 1p91_A 154 RIYA----------------------------PCKAEELARVVKPGGWVITATPGPRHLMEL 187 (269)
T ss_dssp EESC----------------------------CCCHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred EeCC----------------------------hhhHHHHHHhcCCCcEEEEEEcCHHHHHHH
Confidence 8533 123788899999999999988866544443
No 238
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.47 E-value=4.9e-13 Score=106.11 Aligned_cols=127 Identities=13% Similarity=0.140 Sum_probs=83.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhchh-----hhcC-
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGLE-----KRLA- 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~~-----~~~~- 113 (256)
.++.+|||+|||+|.++..+++. ++.|+|+|+++.. .. ...++++|+.+... ....
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~------~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL------ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT------CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc------CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 47899999999999987766554 5699999999742 12 23899999876421 1111
Q ss_pred ---CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcC
Q 025211 114 ---GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKG 190 (256)
Q Consensus 114 ---~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 190 (256)
++||+|++|++........ .. ..........++..+.++|||||++++..........+...+.. .
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~-----~d-----~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~-~ 155 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPS-----RD-----HAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK-N 155 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHH-----HH-----HHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG-G
T ss_pred ccCCcceEEecCCCcCCCCCcc-----cC-----HHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH-h
Confidence 4899999998643322110 00 00112235677889999999999999866544444556666644 3
Q ss_pred CcEEE
Q 025211 191 YAARI 195 (256)
Q Consensus 191 ~~~~~ 195 (256)
|....
T Consensus 156 F~~v~ 160 (191)
T 3dou_A 156 FSSYK 160 (191)
T ss_dssp EEEEE
T ss_pred cCEEE
Confidence 55433
No 239
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.46 E-value=3.6e-13 Score=116.60 Aligned_cols=127 Identities=18% Similarity=0.236 Sum_probs=93.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|+ +.++. ++++...+.. .+++.+|+.+.. + +||+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~----p-~~D~ 250 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLRE----HPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV----P-HADV 250 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHH----CTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC----C-CCSE
T ss_pred cCCceEEEECCccCHHHHHHHHH----CCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC----C-CCcE
Confidence 46789999999999998888877 78889999999 44544 3332222332 388999987432 2 8999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC----------------------
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA---------------------- 176 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------------------- 176 (256)
|++...+++.++. ....+++++.+.|||||+++++....
T Consensus 251 v~~~~vlh~~~d~-------------------~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~ 311 (348)
T 3lst_A 251 HVLKRILHNWGDE-------------------DSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTG 311 (348)
T ss_dssp EEEESCGGGSCHH-------------------HHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSC
T ss_pred EEEehhccCCCHH-------------------HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCC
Confidence 9997665544332 14688999999999999999976311
Q ss_pred --CCHHHHHHHHHHcCCcEEEEEe
Q 025211 177 --NDPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 177 --~~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...+++.+++++.||+...+..
T Consensus 312 ~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 312 QERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp CCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHCCCceEEEEE
Confidence 1345788889999999887776
No 240
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.46 E-value=3.6e-13 Score=117.21 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=80.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.++++|||||||+|.+++.+++. +. .+|+|+|.++ +++.|++++..|++.. .++++|+.+... +++||+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a----GA-~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l---pe~~Dv 152 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA----GA-RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL---PEQVDA 152 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT----TC-SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC---SSCEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHh----CC-CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC---CccccE
Confidence 37899999999999998877765 22 3799999996 8899999999999865 899999988743 368999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
||+.+--.... + ...+..++....++|||||+++-
T Consensus 153 ivsE~~~~~l~---------------~---e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 153 IVSEWMGYGLL---------------H---ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EECCCCBTTBT---------------T---TCSHHHHHHHHHHHEEEEEEEES
T ss_pred EEeeccccccc---------------c---cchhhhHHHHHHhhCCCCceECC
Confidence 99964211100 0 11267888888999999999873
No 241
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.44 E-value=4.2e-12 Score=100.47 Aligned_cols=128 Identities=11% Similarity=0.111 Sum_probs=82.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhccc-----CCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEE-Ecchhhchh----
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQE-----VPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLI-NTDIASGLE---- 109 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~-----~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~-~~d~~~~~~---- 109 (256)
.++.+|||+|||+|.+++.+++.+... .++.+|+|+|+++.+ ... ..++ .+|+.+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHH
Confidence 468999999999999999888874210 012699999999842 112 3777 788765421
Q ss_pred --hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHH
Q 025211 110 --KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMM 187 (256)
Q Consensus 110 --~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 187 (256)
....++||+|++++++....... ... .........++..+.++|||||++++.........++...+.
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 159 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRD-----LDH-----DRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLT 159 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHH-----HHH-----HHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHH
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcc-----cCH-----HHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHH
Confidence 11235899999987543321110 000 000112357899999999999999997665544456666665
Q ss_pred Hc
Q 025211 188 EK 189 (256)
Q Consensus 188 ~~ 189 (256)
..
T Consensus 160 ~~ 161 (196)
T 2nyu_A 160 EE 161 (196)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 242
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.44 E-value=6.3e-13 Score=111.14 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=75.1
Q ss_pred CCCEEEEecccccHHH----HHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH-----------------------cC
Q 025211 42 HPVLCMEVGCGSGYVI----TSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA-----------------------HN 94 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~----~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~-----------------------~~ 94 (256)
++.+|||+|||||..+ +.+++.+.....+++|+|+|+|+.|++.|++++.. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 4689999999999844 44444432111157999999999999999987410 01
Q ss_pred -C--------cceEEEcchhhchhhhc-CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211 95 -V--------HADLINTDIASGLEKRL-AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS 164 (256)
Q Consensus 95 -~--------~~~~~~~d~~~~~~~~~-~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 164 (256)
. ...+.++|+.+. ++. .++||+|+|.-.+++.. ......++..+++.|+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~-------------------~~~~~~vl~~~~~~L~ 243 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFD-------------------KTTQEDILRRFVPLLK 243 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSC-------------------HHHHHHHHHHHGGGEE
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCC-------------------HHHHHHHHHHHHHHhC
Confidence 0 237888888773 221 46899999943322111 1235789999999999
Q ss_pred cCeEEEE
Q 025211 165 KRGWLYL 171 (256)
Q Consensus 165 pgG~l~~ 171 (256)
|||++++
T Consensus 244 pgG~L~l 250 (274)
T 1af7_A 244 PDGLLFA 250 (274)
T ss_dssp EEEEEEE
T ss_pred CCcEEEE
Confidence 9999998
No 243
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.43 E-value=3e-13 Score=110.02 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=86.6
Q ss_pred HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcc--cCCCceEEEEeCCHHHHHHHHHHHHHcC-----Cc-c
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQ--EVPGVQYIATDINPYAVEVTRKTLEAHN-----VH-A 97 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~--~~~~~~v~giD~~~~~i~~a~~~~~~~~-----~~-~ 97 (256)
.+...+++.+.. ...++.+|||+|||+|.++..+++.++. ..+..+|+++|+++.+++.|++++...+ .. .
T Consensus 69 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 69 HMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 344455554421 1246789999999999999988886431 0013589999999999999999988765 23 3
Q ss_pred eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
.++.+|+.+..+. .++||+|+++.+.. .+.+.+.+.|||||++++...
T Consensus 148 ~~~~~d~~~~~~~--~~~fD~I~~~~~~~---------------------------~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 148 LIVEGDGRKGYPP--NAPYNAIHVGAAAP---------------------------DTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEESCGGGCCGG--GCSEEEEEECSCBS---------------------------SCCHHHHHTEEEEEEEEEEES
T ss_pred EEEECCcccCCCc--CCCccEEEECCchH---------------------------HHHHHHHHHhcCCCEEEEEEe
Confidence 8899998774332 36899999987643 223667889999999999654
No 244
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.42 E-value=6.3e-12 Score=108.11 Aligned_cols=130 Identities=13% Similarity=0.151 Sum_probs=90.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC---C------cceEEEcchhhchhhh
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN---V------HADLINTDIASGLEKR 111 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~---~------~~~~~~~d~~~~~~~~ 111 (256)
..+++||++|||+|.++.++++. .+ .+|+++|+++.+++.|++++...+ + ..+++.+|+.+.+...
T Consensus 187 p~pkrVL~IGgG~G~~arellk~----~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~ 261 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKL----KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 261 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT----CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHC----CC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhh
Confidence 36799999999999987766554 34 689999999999999999975321 1 2489999999987643
Q ss_pred --cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHH
Q 025211 112 --LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMM 187 (256)
Q Consensus 112 --~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 187 (256)
..++||+|++++|..+..... .. .....++..+++.+.++|+|||++++...+... .++...++
T Consensus 262 ~~~~~~fDvII~D~~d~P~~~~p------~~-----L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~ 327 (364)
T 2qfm_A 262 AKEGREFDYVINDLTAVPISTSP------EE-----DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYE 327 (364)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC---------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHH
T ss_pred hccCCCceEEEECCCCcccCcCc------hh-----hhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHH
Confidence 357899999998752211000 00 011334555666669999999999997665554 44444444
No 245
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.41 E-value=2.8e-12 Score=111.89 Aligned_cols=136 Identities=15% Similarity=0.239 Sum_probs=100.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.+..+|||+|||+|.++..+++. +|+.+++++|+ +.+++.++++ ...+++.+|+.+..+ .+ |+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~~~p---~~--D~v~ 266 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAK----YPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFDGVP---KG--DAIF 266 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTTCCC---CC--SEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHh----CCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCCCCC---CC--CEEE
Confidence 35689999999999998888877 78899999999 8888876542 234899999886322 23 9999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC------------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA------------------------ 176 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------ 176 (256)
+.-.+++.++. ....+++++++.|+|||+++++....
T Consensus 267 ~~~vlh~~~~~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 327 (368)
T 3reo_A 267 IKWICHDWSDE-------------------HCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYN 327 (368)
T ss_dssp EESCGGGBCHH-------------------HHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHS
T ss_pred EechhhcCCHH-------------------HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhc
Confidence 97655433321 24688999999999999999876321
Q ss_pred -----CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211 177 -----NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 177 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 213 (256)
...++..+++++.||....+...... ..++++.+
T Consensus 328 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~---~~vie~~k 366 (368)
T 3reo_A 328 PGGKERTEKEFQALAMASGFRGFKVASCAFN---TYVMEFLK 366 (368)
T ss_dssp SBCCCCCHHHHHHHHHHTTCCEEEEEEEETT---EEEEEEEC
T ss_pred CCCccCCHHHHHHHHHHCCCeeeEEEEeCCC---cEEEEEEe
Confidence 12346788888999998777665432 34666655
No 246
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.40 E-value=3.2e-13 Score=113.83 Aligned_cols=90 Identities=19% Similarity=0.291 Sum_probs=71.7
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC--cceEEEc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV--HADLINT 102 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~--~~~~~~~ 102 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++..++. ..+++++
T Consensus 14 ~~i~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~L~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 84 (285)
T 1zq9_A 14 PLIINSIIDKAA---LRPTDVVLEVGPGTGNMTVKLLEK------AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVG 84 (285)
T ss_dssp HHHHHHHHHHTC---CCTTCEEEEECCTTSTTHHHHHHH------SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEES
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEcCcccHHHHHHHhh------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc
Confidence 445566666653 257789999999999999888876 34899999999999999999876665 2389999
Q ss_pred chhhchhhhcCCCccEEEECCCCCC
Q 025211 103 DIASGLEKRLAGLVDVMVVNPPYVP 127 (256)
Q Consensus 103 d~~~~~~~~~~~~fD~Ii~npP~~~ 127 (256)
|+.+... .+||+|++|+||+.
T Consensus 85 D~~~~~~----~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 85 DVLKTDL----PFFDTCVANLPYQI 105 (285)
T ss_dssp CTTTSCC----CCCSEEEEECCGGG
T ss_pred ceecccc----hhhcEEEEecCccc
Confidence 9987522 37999999999964
No 247
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.38 E-value=8.9e-12 Score=104.81 Aligned_cols=143 Identities=15% Similarity=0.113 Sum_probs=91.9
Q ss_pred CCCCEEEEeccc------ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceE-EEcchhhchhhhcC
Q 025211 41 HHPVLCMEVGCG------SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADL-INTDIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG------~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~-~~~d~~~~~~~~~~ 113 (256)
.++.+|||+||| +|. ..+++.+ .+++.|+|+|+++. + ...++ +++|+.+... .
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~---~~~~~V~gvDis~~-v-----------~~v~~~i~gD~~~~~~---~ 121 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWL---PTGTLLVDSDLNDF-V-----------SDADSTLIGDCATVHT---A 121 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHS---CTTCEEEEEESSCC-B-----------CSSSEEEESCGGGCCC---S
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHc---CCCCEEEEEECCCC-C-----------CCCEEEEECccccCCc---c
Confidence 578899999994 476 2234442 23579999999998 1 12478 9999987532 3
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAA 193 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~ 193 (256)
++||+|++|++....... .............+++.+.++|||||++++.........++...+.+.||..
T Consensus 122 ~~fD~Vvsn~~~~~~g~~----------~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHV----------TKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWT 191 (290)
T ss_dssp SCEEEEEECCCCCC---C----------CSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEE
T ss_pred CcccEEEEcCCccccccc----------cccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcE
Confidence 689999999752211000 0011112234678899999999999999996655555568888888888865
Q ss_pred EEEEecCCCCccEEEEEEEe
Q 025211 194 RIVVQRSTEEENLHIIKFWR 213 (256)
Q Consensus 194 ~~~~~~~~~~~~~~l~~~~~ 213 (256)
..+..........+++....
T Consensus 192 v~~~asr~~s~e~~lv~~~~ 211 (290)
T 2xyq_A 192 AFVTNVNASSSEAFLIGANY 211 (290)
T ss_dssp EEEEGGGTTSSCEEEEEEEE
T ss_pred EEEEEcCCCchheEEecCCc
Confidence 54442222234445555443
No 248
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.38 E-value=7.7e-12 Score=108.94 Aligned_cols=135 Identities=15% Similarity=0.168 Sum_probs=98.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.+..+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++. ...+++.+|+.+..+ .+ |+|+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~~~p---~~--D~v~ 264 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAH----YPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFKEVP---SG--DTIL 264 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTTCCC---CC--SEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHH----CCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCCCCC---CC--CEEE
Confidence 35689999999999998888877 78899999999 8888776542 234899999887322 23 9999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN----------------------- 177 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------- 177 (256)
+.-.++..++. ....+++++++.|+|||+++++.....
T Consensus 265 ~~~vlh~~~d~-------------------~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~ 325 (364)
T 3p9c_A 265 MKWILHDWSDQ-------------------HCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHN 325 (364)
T ss_dssp EESCGGGSCHH-------------------HHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHC
T ss_pred ehHHhccCCHH-------------------HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcc
Confidence 96554433321 256889999999999999999653211
Q ss_pred ------CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEE
Q 025211 178 ------DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFW 212 (256)
Q Consensus 178 ------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~ 212 (256)
..++..+++++.||+...+..... ...++++.
T Consensus 326 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~---~~~vie~~ 363 (364)
T 3p9c_A 326 PGGRERYEREFQALARGAGFTGVKSTYIYA---NAWAIEFT 363 (364)
T ss_dssp SSCCCCBHHHHHHHHHHTTCCEEEEEEEET---TEEEEEEE
T ss_pred cCCccCCHHHHHHHHHHCCCceEEEEEcCC---ceEEEEEe
Confidence 134677888889998877665533 23455554
No 249
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.37 E-value=9.5e-13 Score=107.76 Aligned_cols=127 Identities=14% Similarity=0.085 Sum_probs=90.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|-+++.++.. .|+++++++|+++.+++.+++|+..+++...+...|.....+ ++.+|+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~----~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p---~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL----PAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL---DEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC----CTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC---CSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhh----CCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC---CCCcchHH
Confidence 35789999999999976555443 688999999999999999999999999988999999877643 47899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----------CHHHHHHHHHHc
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-----------DPSQICLQMMEK 189 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------~~~~~~~~~~~~ 189 (256)
++--+....+ .. ....+ .+.+.|+++|+++- .+..+ ......+.+.+.
T Consensus 204 ~lkti~~Le~--------------q~-----kg~g~-~ll~aL~~~~vvVS-fp~ksl~Grs~gm~~~Y~~~~e~~~~~~ 262 (281)
T 3lcv_B 204 LLKTLPCLET--------------QQ-----RGSGW-EVIDIVNSPNIVVT-FPTKSLGQRSKGMFQNYSQSFESQARER 262 (281)
T ss_dssp ETTCHHHHHH--------------HS-----TTHHH-HHHHHSSCSEEEEE-EECC-------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhh--------------hh-----hHHHH-HHHHHhCCCCEEEe-ccchhhcCCCcchhhHHHHHHHHHHHhc
Confidence 9643211100 00 01223 67788999999886 34311 123555666667
Q ss_pred CCcEEE
Q 025211 190 GYAARI 195 (256)
Q Consensus 190 g~~~~~ 195 (256)
|+.+..
T Consensus 263 g~~~~~ 268 (281)
T 3lcv_B 263 SCRIQR 268 (281)
T ss_dssp TCCEEE
T ss_pred CCceee
Confidence 885433
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.36 E-value=8.8e-13 Score=111.87 Aligned_cols=89 Identities=19% Similarity=0.325 Sum_probs=66.7
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD 103 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d 103 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. +..|+|+|+++.+++.+++++..++.+. +++++|
T Consensus 28 ~~i~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~La~~------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D 98 (299)
T 2h1r_A 28 PGILDKIIYAAK---IKSSDIVLEIGCGTGNLTVKLLPL------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGD 98 (299)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEECCTTSTTHHHHTTT------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcCcCcHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECc
Confidence 345566665543 247789999999999988766653 4589999999999999999998777644 889999
Q ss_pred hhhchhhhcCCCccEEEECCCCC
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYV 126 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~ 126 (256)
+.+.. ..+||+|++|+||.
T Consensus 99 ~~~~~----~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 99 AIKTV----FPKFDVCTANIPYK 117 (299)
T ss_dssp CCSSC----CCCCSEEEEECCGG
T ss_pred hhhCC----cccCCEEEEcCCcc
Confidence 87752 24899999999986
No 251
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.36 E-value=5.1e-12 Score=110.33 Aligned_cols=136 Identities=18% Similarity=0.226 Sum_probs=97.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++. ...+++.+|+.+. . +. ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~~---~-~~-~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISK----YPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFAS---V-PQ-GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTTC---C-CC-EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHH----CCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCcccC---C-CC-CCEEE
Confidence 35789999999999998888877 78889999999 9998877642 1248999998773 1 23 99999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC---CC--------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT---AN-------------------- 177 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~-------------------- 177 (256)
+.-.+++.++. ....+++++.+.|+|||+++++... ..
T Consensus 273 ~~~~lh~~~d~-------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 333 (372)
T 1fp1_D 273 LKAVCHNWSDE-------------------KCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV 333 (372)
T ss_dssp EESSGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred EecccccCCHH-------------------HHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhcc
Confidence 97665543321 1358899999999999999987421 10
Q ss_pred -----CHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEE
Q 025211 178 -----DPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFW 212 (256)
Q Consensus 178 -----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~ 212 (256)
...++.+++++.||....+....... +.++++.
T Consensus 334 ~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~--~~vie~~ 371 (372)
T 1fp1_D 334 GGRERTEKQYEKLSKLSGFSKFQVACRAFNS--LGVMEFY 371 (372)
T ss_dssp SCCCEEHHHHHHHHHHTTCSEEEEEEEETTT--EEEEEEE
T ss_pred CCccCCHHHHHHHHHHCCCceEEEEEcCCCC--eEEEEEe
Confidence 13466777888899877766533221 2555543
No 252
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.36 E-value=1.9e-12 Score=105.81 Aligned_cols=145 Identities=12% Similarity=0.145 Sum_probs=89.2
Q ss_pred ccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc
Q 025211 17 VYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH 96 (256)
Q Consensus 17 ~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~ 96 (256)
-|..|- ..-.+.+++.+.. ..++.+|||+|||+|.++..+++. + ..+|+|+|+++.|++.++++.....
T Consensus 16 ~yvsrg--~~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~----g-~~~V~gvDis~~ml~~a~~~~~~~~-- 84 (232)
T 3opn_A 16 RYVSRG--GLKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN----G-AKLVYALDVGTNQLAWKIRSDERVV-- 84 (232)
T ss_dssp CSSSTT--HHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT----T-CSEEEEECSSCCCCCHHHHTCTTEE--
T ss_pred CccCCc--HHHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc----C-CCEEEEEcCCHHHHHHHHHhCcccc--
Confidence 355543 3333455555532 235789999999999998887765 2 2389999999999998776432111
Q ss_pred ceEEEcchhhch-hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211 97 ADLINTDIASGL-EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT 175 (256)
Q Consensus 97 ~~~~~~d~~~~~-~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (256)
.....++.... .......||.+.++..|.. +..++.++.++|||||+++++..+
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~------------------------l~~~l~~i~rvLkpgG~lv~~~~p 139 (232)
T 3opn_A 85 -VMEQFNFRNAVLADFEQGRPSFTSIDVSFIS------------------------LDLILPPLYEILEKNGEVAALIKP 139 (232)
T ss_dssp -EECSCCGGGCCGGGCCSCCCSEEEECCSSSC------------------------GGGTHHHHHHHSCTTCEEEEEECH
T ss_pred -ccccceEEEeCHhHcCcCCCCEEEEEEEhhh------------------------HHHHHHHHHHhccCCCEEEEEECc
Confidence 00111221111 1111123566666655532 246799999999999999986310
Q ss_pred C---------------------CCHHHHHHHHHHcCCcEEEEE
Q 025211 176 A---------------------NDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 176 ~---------------------~~~~~~~~~~~~~g~~~~~~~ 197 (256)
. ...+++.+.+.+.||....+.
T Consensus 140 ~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 140 QFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp HHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred ccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 0 012367788888999876654
No 253
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.36 E-value=3e-12 Score=107.57 Aligned_cols=134 Identities=11% Similarity=0.134 Sum_probs=87.0
Q ss_pred HHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhc
Q 025211 29 DALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASG 107 (256)
Q Consensus 29 ~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~ 107 (256)
+.+++.+.. ..++.+|||+|||||.++..+++. +..+|+|+|+++.|++.+.++- ... .+...++...
T Consensus 74 ~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-----ga~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l 142 (291)
T 3hp7_A 74 EKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-----GAKLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYA 142 (291)
T ss_dssp HHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-----TCSEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGC
T ss_pred HHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-----CCCEEEEEECCHHHHHHHHHhC----cccceecccCceec
Confidence 344444431 236789999999999998877765 2348999999999998754321 111 1112233332
Q ss_pred hhh-hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC-CC--------
Q 025211 108 LEK-RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT-AN-------- 177 (256)
Q Consensus 108 ~~~-~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~-------- 177 (256)
... +...+||+|+++..|+. +..++..+.++|+|||+++++..+ +.
T Consensus 143 ~~~~l~~~~fD~v~~d~sf~s------------------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~ 198 (291)
T 3hp7_A 143 EPVDFTEGLPSFASIDVSFIS------------------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGK 198 (291)
T ss_dssp CGGGCTTCCCSEEEECCSSSC------------------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-
T ss_pred chhhCCCCCCCEEEEEeeHhh------------------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCC
Confidence 211 12245999999876642 356799999999999999886211 11
Q ss_pred ------------CHHHHHHHHHHcCCcEEEEE
Q 025211 178 ------------DPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 178 ------------~~~~~~~~~~~~g~~~~~~~ 197 (256)
..+++..++...||....+.
T Consensus 199 ~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 199 NGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 12356778888999876644
No 254
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.32 E-value=1.1e-11 Score=107.27 Aligned_cols=124 Identities=15% Similarity=0.225 Sum_probs=92.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++. ...+++.+|+.+.. + .||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~~~----p-~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICET----FPKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFTSI----P-NADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTTCC----C-CCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHH----CCCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccCCC----C-CccEEE
Confidence 35689999999999998888776 78889999999 9999877641 12488999987632 1 399999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc---CeEEEEEEeCCC--------------------
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK---RGWLYLVTLTAN-------------------- 177 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~-------------------- 177 (256)
+.-.+++.++. ....+++++.+.||| ||+++++.....
T Consensus 252 ~~~~lh~~~d~-------------------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~ 312 (352)
T 1fp2_A 252 LKYILHNWTDK-------------------DCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMA 312 (352)
T ss_dssp EESCGGGSCHH-------------------HHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGG
T ss_pred eehhhccCCHH-------------------HHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHH
Confidence 97665543321 134889999999999 999998753211
Q ss_pred -------CHHHHHHHHHHcCCcEEEEEe
Q 025211 178 -------DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 178 -------~~~~~~~~~~~~g~~~~~~~~ 198 (256)
..+++.+++++.||....+..
T Consensus 313 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 313 CLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp GGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred hccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 124667788888998776655
No 255
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.31 E-value=2.5e-12 Score=112.88 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=67.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--CCcc-eEEEcchhhchhhhcCCCccE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--NVHA-DLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~~~~-~~~~~d~~~~~~~~~~~~fD~ 118 (256)
++.+|||+|||+|..++.++.. +.+|+++|+|+.+++.|++|+..+ ++.. +++++|+.+.+.....++||+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDv 166 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDY 166 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceE
Confidence 4799999999999998877654 459999999999999999999988 7744 999999988654322358999
Q ss_pred EEECCCCCCC
Q 025211 119 MVVNPPYVPT 128 (256)
Q Consensus 119 Ii~npP~~~~ 128 (256)
|++||||...
T Consensus 167 V~lDPPrr~~ 176 (410)
T 3ll7_A 167 IYVDPARRSG 176 (410)
T ss_dssp EEECCEEC--
T ss_pred EEECCCCcCC
Confidence 9999999763
No 256
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.31 E-value=1.6e-12 Score=107.93 Aligned_cols=82 Identities=17% Similarity=0.205 Sum_probs=67.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH-------HHHHHHHHHHHHcCCc--ceEEEcchhhchhhh
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP-------YAVEVTRKTLEAHNVH--ADLINTDIASGLEKR 111 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~-------~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~ 111 (256)
.++.+|||+|||+|.+++.++.. +++|+|+|+++ .+++.|++|+..+++. .+++++|+.+.+..+
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhh
Confidence 35789999999999999988875 45899999999 9999999998887763 489999998875544
Q ss_pred cC--CCccEEEECCCCCCC
Q 025211 112 LA--GLVDVMVVNPPYVPT 128 (256)
Q Consensus 112 ~~--~~fD~Ii~npP~~~~ 128 (256)
.+ ++||+|++||||.+.
T Consensus 156 ~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHCCCSEEEECCCC---
T ss_pred hccCCCccEEEECCCCCCc
Confidence 33 689999999999653
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.31 E-value=9.5e-12 Score=104.98 Aligned_cols=90 Identities=18% Similarity=0.142 Sum_probs=71.1
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++.. .-+.+++++|+
T Consensus 36 ~~i~~~Iv~~l~---~~~~~~VLEIG~G~G~lT~~La~~------~~~V~aVEid~~li~~a~~~~~~-~~~v~vi~gD~ 105 (295)
T 3gru_A 36 KNFVNKAVESAN---LTKDDVVLEIGLGKGILTEELAKN------AKKVYVIEIDKSLEPYANKLKEL-YNNIEIIWGDA 105 (295)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCGGGHHHHHHHHHH-CSSEEEEESCT
T ss_pred HHHHHHHHHhcC---CCCcCEEEEECCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHhcc-CCCeEEEECch
Confidence 345566666553 257889999999999999888876 35899999999999999999862 22348999999
Q ss_pred hhchhhhcCCCccEEEECCCCC
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYV 126 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~ 126 (256)
.+...+ +..||.|++|+||+
T Consensus 106 l~~~~~--~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 106 LKVDLN--KLDFNKVVANLPYQ 125 (295)
T ss_dssp TTSCGG--GSCCSEEEEECCGG
T ss_pred hhCCcc--cCCccEEEEeCccc
Confidence 876322 35799999999996
No 258
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.29 E-value=2.4e-12 Score=118.47 Aligned_cols=109 Identities=18% Similarity=0.242 Sum_probs=81.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-CcceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-VHADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
+.+.+|||||||+|.++..+++. ++.|+|||.++.+++.|+......+ ++.++.++++.+......+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEE
Confidence 45689999999999998888876 6799999999999999999988877 5669999999887655556899999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
+|.-.+.+.+++. . . ..+..+.+.|+++|..++...
T Consensus 139 ~~~e~~ehv~~~~---------------~---~-~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 139 IGLSVFHHIVHLH---------------G---I-DEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp EEESCHHHHHHHH---------------C---H-HHHHHHHHHHHHHSSEEEEEC
T ss_pred EECcchhcCCCHH---------------H---H-HHHHHHHHHhccccceeeEEe
Confidence 9954433222110 0 1 112345667888888776553
No 259
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.29 E-value=2.1e-11 Score=105.87 Aligned_cols=123 Identities=14% Similarity=0.215 Sum_probs=92.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
+..+|||+|||+|.++..+++. +|+.+++++|+ +.+++.+++. ...+++.+|+.+. . + .||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~~---~-~-~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEI----FPHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFKS---I-P-SADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTTC---C-C-CCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHH----CCCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCCC---C-C-CceEEEE
Confidence 5689999999999998888877 78889999999 7888766541 1248889998762 1 2 4999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc---CeEEEEEEeCCC---------------------
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK---RGWLYLVTLTAN--------------------- 177 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~--------------------- 177 (256)
...+++.++.+ ...+++++.+.|+| ||+++++.....
T Consensus 258 ~~vlh~~~d~~-------------------~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~ 318 (358)
T 1zg3_A 258 KWVLHDWNDEQ-------------------SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT 318 (358)
T ss_dssp ESCGGGSCHHH-------------------HHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCHHH-------------------HHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc
Confidence 77665443321 45889999999999 999998653211
Q ss_pred -------CHHHHHHHHHHcCCcEEEEEe
Q 025211 178 -------DPSQICLQMMEKGYAARIVVQ 198 (256)
Q Consensus 178 -------~~~~~~~~~~~~g~~~~~~~~ 198 (256)
...++.+++++.||....+..
T Consensus 319 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 319 MFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 234667778888998777665
No 260
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.28 E-value=2.8e-11 Score=100.48 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=82.1
Q ss_pred CCCEEEEecccc--cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-ceEEEcchhhchh----hhcCC
Q 025211 42 HPVLCMEVGCGS--GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-ADLINTDIASGLE----KRLAG 114 (256)
Q Consensus 42 ~~~~VLDlGcG~--G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~~~~~~d~~~~~~----~~~~~ 114 (256)
...+|||+|||+ +..+..+++.. .|+++|+++|+|+.|++.|+.++...+.. ..++++|+.+... +...+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~---~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSV---APESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHH---CTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHH---CCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccc
Confidence 447999999997 33444444433 68899999999999999999887644322 3899999987521 11124
Q ss_pred Ccc-----EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 115 LVD-----VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 115 ~fD-----~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
.|| .|++|-.+++.++.+ ....++..+.+.|+|||++++.+....
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~------------------~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDED------------------DAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGG------------------CHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ccCcCCcchHHhhhhHhcCCchh------------------hHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 455 577877666554432 135789999999999999999876543
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=3.3e-11 Score=99.73 Aligned_cols=91 Identities=14% Similarity=0.101 Sum_probs=68.8
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++.. .-+.+++++|+
T Consensus 15 ~~i~~~iv~~~~---~~~~~~VLEIG~G~G~lt~~La~~------~~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~ 84 (255)
T 3tqs_A 15 SFVLQKIVSAIH---PQKTDTLVEIGPGRGALTDYLLTE------CDNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDA 84 (255)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEECCTTTTTHHHHTTT------SSEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCT
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcccccHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcch
Confidence 345566666653 257889999999999988777654 35899999999999999998764 22348999999
Q ss_pred hhchhhh-c-CCCccEEEECCCCC
Q 025211 105 ASGLEKR-L-AGLVDVMVVNPPYV 126 (256)
Q Consensus 105 ~~~~~~~-~-~~~fD~Ii~npP~~ 126 (256)
.+...+. . .++|| |++|+||+
T Consensus 85 ~~~~~~~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 85 LQFDFSSVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp TTCCGGGSCCSSCEE-EEEECCHH
T ss_pred HhCCHHHhccCCCeE-EEecCCcc
Confidence 8874321 1 35688 99999985
No 262
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.27 E-value=1.6e-11 Score=106.73 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=78.1
Q ss_pred HHHHHHHHhhcccccCCCCEEEEeccc------ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceE
Q 025211 26 ALVDALLADRINLVEHHPVLCMEVGCG------SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADL 99 (256)
Q Consensus 26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG------~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~ 99 (256)
.+++.++..+. .++.+||||||| +|..++.+++.. +|+++|+|+|+++.|. ......++
T Consensus 204 ~~Ye~lL~~l~----~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~---fP~a~V~GVDiSp~m~--------~~~~rI~f 268 (419)
T 3sso_A 204 PHYDRHFRDYR----NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF---FPRGQIYGLDIMDKSH--------VDELRIRT 268 (419)
T ss_dssp HHHHHHHGGGT----TSCCEEEEECCSCTTCSSCCCHHHHHHHHH---CTTCEEEEEESSCCGG--------GCBTTEEE
T ss_pred HHHHHHHHhhc----CCCCEEEEEecCCCcCCCCCHHHHHHHHHh---CCCCEEEEEECCHHHh--------hcCCCcEE
Confidence 45555555543 367999999999 677666665542 5788999999999973 12223489
Q ss_pred EEcchhhchhh--h--cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 100 INTDIASGLEK--R--LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 100 ~~~d~~~~~~~--~--~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+++|+.+.... . ..++||+|+++--.+ ......+++++.++|||||++++..
T Consensus 269 v~GDa~dlpf~~~l~~~d~sFDlVisdgsH~----------------------~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 269 IQGDQNDAEFLDRIARRYGPFDIVIDDGSHI----------------------NAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp EECCTTCHHHHHHHHHHHCCEEEEEECSCCC----------------------HHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEecccccchhhhhhcccCCccEEEECCccc----------------------chhHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998774211 0 147899999963211 1225788999999999999999964
No 263
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.27 E-value=2.2e-11 Score=101.21 Aligned_cols=97 Identities=7% Similarity=-0.070 Sum_probs=73.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-----CCcceEEEcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-----NVHADLINTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~ 115 (256)
..+++|||+|||+|..+.++++ . + .+|+++|+++.+++.|++++... ....+++.+|..+.. ++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~----~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~ 139 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFK----Y-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KK 139 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTT----S-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CC
T ss_pred CCCCEEEEEeCCcCHHHHHHHh----C-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hh
Confidence 3568999999999997544433 2 4 69999999999999998876431 123488889987764 68
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
||+|+++.+ + ...+++.+.+.|+|||++++...
T Consensus 140 fD~Ii~d~~-----d---------------------p~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 140 YDLIFCLQE-----P---------------------DIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp EEEEEESSC-----C---------------------CHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEECCC-----C---------------------hHHHHHHHHHhcCCCcEEEEEcC
Confidence 999999742 1 12378999999999999998644
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.25 E-value=1.9e-11 Score=103.51 Aligned_cols=92 Identities=12% Similarity=0.153 Sum_probs=71.9
Q ss_pred HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211 27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS 106 (256)
Q Consensus 27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~ 106 (256)
+++.+++.+. ..++.+|||+|||+|..++.+++. .++++|+|+|+|+.+++.|++++..++....++++|+.+
T Consensus 14 Ll~e~l~~L~---~~~g~~vLD~g~G~G~~s~~la~~----~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 14 MVREVIEFLK---PEDEKIILDCTVGEGGHSRAILEH----CPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE 86 (301)
T ss_dssp THHHHHHHHC---CCTTCEEEETTCTTSHHHHHHHHH----CTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG
T ss_pred HHHHHHHhcC---CCCCCEEEEEeCCcCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence 4455555543 257889999999999999988887 456799999999999999999998877344899999876
Q ss_pred chhhh---cCCCccEEEECCCC
Q 025211 107 GLEKR---LAGLVDVMVVNPPY 125 (256)
Q Consensus 107 ~~~~~---~~~~fD~Ii~npP~ 125 (256)
..... ...+||.|++|||+
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHhcCCCCCCEEEEcCcc
Confidence 53211 11579999999986
No 265
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.25 E-value=9.3e-14 Score=114.55 Aligned_cols=124 Identities=19% Similarity=0.139 Sum_probs=80.9
Q ss_pred HHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc
Q 025211 28 VDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG 107 (256)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~ 107 (256)
++.+++.+. ..++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++. .....+++++|+.+.
T Consensus 18 ~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~l~~~------~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 18 LNQIIKQLN---LKETDTVYEIGTGKGHLTTKLAKI------SKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQF 87 (245)
T ss_dssp HHHHHHHCC---CCSSEEEEECSCCCSSCSHHHHHH------SSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTT
T ss_pred HHHHHHhcC---CCCCCEEEEEeCCCCHHHHHHHHh------CCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhc
Confidence 344544443 246789999999999999888876 2589999999999999888765 112238889998876
Q ss_pred hhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHH----HHHhhccccCeEEEEEE
Q 025211 108 LEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKIL----PSADKLLSKRGWLYLVT 173 (256)
Q Consensus 108 ~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~LkpgG~l~~~~ 173 (256)
..+ .+++| .|++||||+....... .. ..+... ...++ +.+.++|+|||+++++.
T Consensus 88 ~~~-~~~~f-~vv~n~Py~~~~~~~~--~~--~~~~~~------~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 88 QFP-NKQRY-KIVGNIPYHLSTQIIK--KV--VFESRA------SDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TCC-CSSEE-EEEEECCSSSCHHHHH--HH--HHHCCC------EEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred Ccc-cCCCc-EEEEeCCccccHHHHH--HH--HhCCCC------CeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 321 12578 8999999986431100 00 000000 01123 55788899998877643
No 266
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.22 E-value=1.6e-10 Score=99.89 Aligned_cols=143 Identities=12% Similarity=0.004 Sum_probs=98.7
Q ss_pred chHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc------
Q 025211 23 DSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH------ 96 (256)
Q Consensus 23 ~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~------ 96 (256)
.+.+++..+++- +++.+|||+|+|.|.-+..++.+ ..+..|+++|+++..++.+++|+.+.+..
T Consensus 135 ~aS~l~~~~L~~------~pg~~VLD~CAaPGGKT~~la~~----~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~ 204 (359)
T 4fzv_A 135 AASLLPVLALGL------QPGDIVLDLCAAPGGKTLALLQT----GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGN 204 (359)
T ss_dssp GGGHHHHHHHCC------CTTEEEEESSCTTCHHHHHHHHT----TCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSS
T ss_pred HHHHHHHHHhCC------CCCCEEEEecCCccHHHHHHHHh----cCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCC
Confidence 355565555543 68999999999999999888876 34458999999999999999999987653
Q ss_pred -ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCC----CCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 97 -ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGG----ENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 97 -~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
..+...|..... ....+.||.|++++|...... ....+.+...+... ..-......+|..+.++|||||+++.
T Consensus 205 ~v~v~~~D~~~~~-~~~~~~fD~VLlDaPCSg~g~-g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVY 282 (359)
T 4fzv_A 205 QVRVTSWDGRKWG-ELEGDTYDRVLVDVPCTTDRH-SLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVY 282 (359)
T ss_dssp SEEEECCCGGGHH-HHSTTCEEEEEEECCCCCHHH-HTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ceEEEeCchhhcc-hhccccCCEEEECCccCCCCC-cccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 267777876653 234578999999999743100 01111111111000 00012456789999999999999999
Q ss_pred EEeCCC
Q 025211 172 VTLTAN 177 (256)
Q Consensus 172 ~~~~~~ 177 (256)
++++..
T Consensus 283 sTCSl~ 288 (359)
T 4fzv_A 283 STCSLS 288 (359)
T ss_dssp EESCCC
T ss_pred EeCCCc
Confidence 998765
No 267
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.21 E-value=7.8e-11 Score=91.72 Aligned_cols=109 Identities=15% Similarity=0.127 Sum_probs=83.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh-hhcCCCccEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE-KRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~fD~I 119 (256)
+++.+|||+|||+ +++|+++.|++.|+++... ..+++++|+.+... ++.+++||+|
T Consensus 11 ~~g~~vL~~~~g~--------------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp CTTSEEEEEECTT--------------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCCEEEEecCCc--------------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEE
Confidence 5789999999986 1279999999999987532 25889999887532 1146789999
Q ss_pred EECCCCCCC-CCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------CHHHHHHHHHHc
Q 025211 120 VVNPPYVPT-PEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------DPSQICLQMMEK 189 (256)
Q Consensus 120 i~npP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~~~~~~ 189 (256)
+++..+++. ++ ...++++++++|||||++++..+... ...++.+.+.+.
T Consensus 68 ~~~~~l~~~~~~---------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 126 (176)
T 2ld4_A 68 LSGLVPGSTTLH---------------------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLS 126 (176)
T ss_dssp EECCSTTCCCCC---------------------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHT
T ss_pred EECChhhhcccC---------------------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHC
Confidence 998766554 22 36889999999999999999665221 256889999999
Q ss_pred CCcEE
Q 025211 190 GYAAR 194 (256)
Q Consensus 190 g~~~~ 194 (256)
|| ..
T Consensus 127 Gf-i~ 130 (176)
T 2ld4_A 127 GL-VE 130 (176)
T ss_dssp TC-EE
T ss_pred CC-cE
Confidence 99 54
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.21 E-value=4.4e-11 Score=99.75 Aligned_cols=91 Identities=20% Similarity=0.154 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+.. .++ +|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++. +.+.+++++|+
T Consensus 33 ~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~------~~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~ 100 (271)
T 3fut_A 33 EAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEA------GAEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDA 100 (271)
T ss_dssp HHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHT------TCCEEEEESCGGGHHHHHHHTT--TSSEEEEESCG
T ss_pred HHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcC--CCCEEEEECCh
Confidence 4455666666532 456 9999999999999888876 3589999999999999999875 22348999999
Q ss_pred hhchhhhcCCCccEEEECCCCCCC
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVPT 128 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~~ 128 (256)
.+...+. ...+|.|++|+||+..
T Consensus 101 l~~~~~~-~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 101 LLYPWEE-VPQGSLLVANLPYHIA 123 (271)
T ss_dssp GGSCGGG-SCTTEEEEEEECSSCC
T ss_pred hhCChhh-ccCccEEEecCccccc
Confidence 8864321 1368999999999753
No 269
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.20 E-value=1.9e-10 Score=94.62 Aligned_cols=90 Identities=19% Similarity=0.140 Sum_probs=68.0
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. +.+|+|+|+++.+++.+++++... -..+++++|+
T Consensus 16 ~~~~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~ 85 (244)
T 1qam_A 16 KHNIDKIMTNIR---LNEHDNIFEIGSGKGHFTLELVQR------CNFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDI 85 (244)
T ss_dssp HHHHHHHHTTCC---CCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCG
T ss_pred HHHHHHHHHhCC---CCCCCEEEEEeCCchHHHHHHHHc------CCeEEEEECCHHHHHHHHHhhccC-CCeEEEEChH
Confidence 455666666553 247789999999999999888876 258999999999999999987532 2348999999
Q ss_pred hhchhhhcCCCccEEEECCCCC
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYV 126 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~ 126 (256)
.+...+ ....| .|++|+||+
T Consensus 86 ~~~~~~-~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 86 LQFKFP-KNQSY-KIFGNIPYN 105 (244)
T ss_dssp GGCCCC-SSCCC-EEEEECCGG
T ss_pred HhCCcc-cCCCe-EEEEeCCcc
Confidence 876322 11345 689999996
No 270
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.19 E-value=1.8e-10 Score=93.44 Aligned_cols=73 Identities=12% Similarity=0.091 Sum_probs=62.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.++.+|||+|||+|.+++... ++..++|+|+++.+++.+++++..++.+..+...|.....+ ++++|+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-------~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~---~~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-------GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP---AEAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-------TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC---CCBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc-------cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC---CCCcchHH
Confidence 368899999999999875544 46799999999999999999999999878999999887644 36999999
Q ss_pred ECC
Q 025211 121 VNP 123 (256)
Q Consensus 121 ~np 123 (256)
++-
T Consensus 174 llk 176 (253)
T 3frh_A 174 IFK 176 (253)
T ss_dssp EES
T ss_pred HHH
Confidence 863
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.15 E-value=2.7e-10 Score=93.96 Aligned_cols=91 Identities=19% Similarity=0.152 Sum_probs=66.4
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++.. +..+|+|+|+++.+++.++++ ...+.+++++|+
T Consensus 17 ~~i~~~iv~~~~---~~~~~~VLDiG~G~G~lt~~L~~~-----~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~ 85 (249)
T 3ftd_A 17 EGVLKKIAEELN---IEEGNTVVEVGGGTGNLTKVLLQH-----PLKKLYVIELDREMVENLKSI---GDERLEVINEDA 85 (249)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEEESCHHHHHHHHTTS-----CCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCT
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcCchHHHHHHHHHc-----CCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcch
Confidence 455666666653 246889999999999988766553 246999999999999999887 222348999999
Q ss_pred hhchhhhcCCCccEEEECCCCCC
Q 025211 105 ASGLEKRLAGLVDVMVVNPPYVP 127 (256)
Q Consensus 105 ~~~~~~~~~~~fD~Ii~npP~~~ 127 (256)
.+...+...+. ..|++|+||+.
T Consensus 86 ~~~~~~~~~~~-~~vv~NlPy~i 107 (249)
T 3ftd_A 86 SKFPFCSLGKE-LKVVGNLPYNV 107 (249)
T ss_dssp TTCCGGGSCSS-EEEEEECCTTT
T ss_pred hhCChhHccCC-cEEEEECchhc
Confidence 88643321123 48999999963
No 272
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.15 E-value=1.3e-11 Score=103.34 Aligned_cols=108 Identities=10% Similarity=0.052 Sum_probs=69.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH---HcCCcceEE--EcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE---AHNVHADLI--NTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~---~~~~~~~~~--~~d~~~~~~~~~~~~ 115 (256)
.++.+|||+|||+|.++..+++. ..|+|+|+++ ++..++++.. ..+.+..++ ++|+.+.. +++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~-------~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~----~~~ 148 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ-------PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME----PFQ 148 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS-------TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC----CCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc-------CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC----CCC
Confidence 47899999999999988766653 3899999998 5333222100 011133777 88887742 478
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe--EEEEEEeC
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG--WLYLVTLT 175 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG--~l~~~~~~ 175 (256)
||+|+|+.. +...... .. ......++..+.++||||| .+++....
T Consensus 149 fD~Vvsd~~-~~~~~~~-----~d---------~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 149 ADTVLCDIG-ESNPTAA-----VE---------ASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CSEEEECCC-CCCSCHH-----HH---------HHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCEEEECCC-cCCCchh-----hh---------HHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999999876 2222110 00 0001137888999999999 88875544
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.15 E-value=4.7e-10 Score=93.98 Aligned_cols=94 Identities=17% Similarity=0.148 Sum_probs=68.6
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++..++....++ +++|+|+|+++.+++.++++. ..+.+++++|+
T Consensus 28 ~~i~~~iv~~~~---~~~~~~VLEIG~G~G~lt~~La~~~~~~--~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~ 99 (279)
T 3uzu_A 28 HGVIDAIVAAIR---PERGERMVEIGPGLGALTGPVIARLATP--GSPLHAVELDRDLIGRLEQRF---GELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEECCTTSTTHHHHHHHHCBT--TBCEEEEECCHHHHHHHHHHH---GGGEEEEESCG
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEccccHHHHHHHHHhCCCc--CCeEEEEECCHHHHHHHHHhc---CCCcEEEECCh
Confidence 345566666653 2578899999999999999988874210 245999999999999999983 22348999999
Q ss_pred hhchhh-hcC-C--CccEEEECCCCC
Q 025211 105 ASGLEK-RLA-G--LVDVMVVNPPYV 126 (256)
Q Consensus 105 ~~~~~~-~~~-~--~fD~Ii~npP~~ 126 (256)
.+...+ ..+ . ..+.|++|+||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEECCHH
T ss_pred hcCChhHhcccccCCceEEEEccCcc
Confidence 886432 211 1 346899999985
No 274
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.13 E-value=1.5e-11 Score=102.43 Aligned_cols=108 Identities=17% Similarity=0.068 Sum_probs=69.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH---HHcCCcceEE--EcchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL---EAHNVHADLI--NTDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~---~~~~~~~~~~--~~d~~~~~~~~~~~~ 115 (256)
.++.+|||+|||+|.++..+++. ..|+|+|+++ ++..++++. ...+....++ ++|+.+.. +++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~-------~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~----~~~ 140 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR-------PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP----VER 140 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS-------TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC----CCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc-------CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC----CCC
Confidence 57899999999999988766553 4899999998 532222110 0011133777 88887742 478
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe--EEEEEEeC
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG--WLYLVTLT 175 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG--~l~~~~~~ 175 (256)
||+|+|+.. +....... + ......++..+.++||||| .+++....
T Consensus 141 fD~V~sd~~-~~~~~~~~-----d---------~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 141 TDVIMCDVG-ESSPKWSV-----E---------SERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CSEEEECCC-CCCSCHHH-----H---------HHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CcEEEEeCc-ccCCccch-----h---------HHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 999999876 32221100 0 0001137888999999999 88885544
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.12 E-value=4.1e-10 Score=93.15 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=62.3
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-------C-C--cceEEEcchhhchhhhcC
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-------N-V--HADLINTDIASGLEKRLA 113 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-------~-~--~~~~~~~d~~~~~~~~~~ 113 (256)
.+|||+|||+|..++.++.. +++|+++|+++.+++.+++++... + + ..+++++|..+.+... .
T Consensus 90 ~~VLDl~~G~G~dal~lA~~------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~-~ 162 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI-T 162 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC-S
T ss_pred CEEEEcCCcCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC-c
Confidence 89999999999999999886 458999999999888877776532 2 2 2389999998876543 3
Q ss_pred CCccEEEECCCCCC
Q 025211 114 GLVDVMVVNPPYVP 127 (256)
Q Consensus 114 ~~fD~Ii~npP~~~ 127 (256)
.+||+|++||||..
T Consensus 163 ~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 163 PRPQVVYLDPMFPH 176 (258)
T ss_dssp SCCSEEEECCCCCC
T ss_pred ccCCEEEEcCCCCC
Confidence 47999999999964
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.08 E-value=9.2e-10 Score=91.07 Aligned_cols=134 Identities=18% Similarity=0.262 Sum_probs=91.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhccc---CC-----CceEEEEeCCH---HHHH-----------HHHHHHHHc-----
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQE---VP-----GVQYIATDINP---YAVE-----------VTRKTLEAH----- 93 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~---~~-----~~~v~giD~~~---~~i~-----------~a~~~~~~~----- 93 (256)
+++.+|||+|+|+|..++.+++...+. .| ...++++|..| +.+. .+++++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 466899999999999988877764111 34 25899999887 4443 556665541
Q ss_pred ---------C-CcceEEEcchhhchhhhcC---CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh
Q 025211 94 ---------N-VHADLINTDIASGLEKRLA---GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD 160 (256)
Q Consensus 94 ---------~-~~~~~~~~d~~~~~~~~~~---~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (256)
+ ...+++.+|+.+.++.... ..||+|+.++ |.+...++ .| ...++..+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~--------lw---------~~~~l~~l~ 200 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPD--------MW---------TQNLFNAMA 200 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGG--------GC---------CHHHHHHHH
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChh--------hc---------CHHHHHHHH
Confidence 1 1227899999887665322 3799999985 22111111 11 367899999
Q ss_pred hccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEE
Q 025211 161 KLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 161 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 196 (256)
++|+|||+++. +.....+++.+...||.+...
T Consensus 201 ~~L~pGG~l~t----ysaa~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 201 RLARPGGTLAT----FTSAGFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp HHEEEEEEEEE----SCCBHHHHHHHHHHTEEEEEE
T ss_pred HHcCCCcEEEE----EeCCHHHHHHHHHCCCEEEeC
Confidence 99999999885 333457888898999986544
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.06 E-value=1.7e-10 Score=95.24 Aligned_cols=93 Identities=11% Similarity=-0.021 Sum_probs=66.0
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..+++.+++.+. ..++.+|||+|||+|.++. +. . ....+|+|+|+++.+++.+++++... -+.+++++|+
T Consensus 7 ~~i~~~iv~~~~---~~~~~~VLEIG~G~G~lt~-l~-~----~~~~~v~avEid~~~~~~a~~~~~~~-~~v~~i~~D~ 76 (252)
T 1qyr_A 7 QFVIDSIVSAIN---PQKGQAMVEIGPGLAALTE-PV-G----ERLDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDA 76 (252)
T ss_dssp HHHHHHHHHHHC---CCTTCCEEEECCTTTTTHH-HH-H----TTCSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCG
T ss_pred HHHHHHHHHhcC---CCCcCEEEEECCCCcHHHH-hh-h----CCCCeEEEEECCHHHHHHHHHHhccC-CceEEEECch
Confidence 345566666553 2467899999999999987 43 2 22234999999999999999876432 1348999999
Q ss_pred hhchh-hhc--CCCccEEEECCCCCC
Q 025211 105 ASGLE-KRL--AGLVDVMVVNPPYVP 127 (256)
Q Consensus 105 ~~~~~-~~~--~~~fD~Ii~npP~~~ 127 (256)
.+... ... .+..|.|++|+||+.
T Consensus 77 ~~~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 77 MTFNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp GGCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred hhCCHHHhhcccCCceEEEECCCCCc
Confidence 87532 211 134689999999974
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.04 E-value=5.1e-09 Score=83.15 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=72.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC--c--ceEEEcchhhc----------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV--H--ADLINTDIASG---------- 107 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~--~--~~~~~~d~~~~---------- 107 (256)
+.++|||+||| .-++.+++. ++++|+++|.+++..+.|+++++..++ . .+++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-----~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-----PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-----TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred CCCEEEEECch--HHHHHHHHc-----CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccch
Confidence 56899999985 566666653 257999999999999999999999986 3 38899996543
Q ss_pred ----hhh-------h-cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 108 ----LEK-------R-LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 108 ----~~~-------~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
++. . ..++||+|+.+-.+ ....+..+.++|+|||++++
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k--------------------------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRF--------------------------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSS--------------------------HHHHHHHHHHHCSSCEEEEE
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCC--------------------------chhHHHHHHHhcCCCeEEEE
Confidence 111 1 13689999996321 23556667789999999976
No 279
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.01 E-value=3.8e-10 Score=95.77 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=68.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC----CHHHHHHHHHHHHHcCCcc-eEEEc-chhhchhhhcCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI----NPYAVEVTRKTLEAHNVHA-DLINT-DIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~----~~~~i~~a~~~~~~~~~~~-~~~~~-d~~~~~~~~~~~ 114 (256)
.++.+|||+|||+|.++..+++. ..|+|+|+ ++.+++.+. ....+.+. .++++ |+.+.. .+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~-------~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~----~~ 147 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL-------KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP----PE 147 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS-------TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC----CC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc-------CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC----cC
Confidence 46789999999999998776653 37999999 554432111 11112233 77777 776542 36
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
+||+|+|+.++. ..... .. ......++..+.++|||||.+++.....
T Consensus 148 ~fD~V~sd~~~~-~g~~~-----~d---------~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 148 RCDTLLCDIGES-SPNPT-----VE---------AGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCSEEEECCCCC-CSSHH-----HH---------HHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCCEEEECCccc-cCcch-----hh---------HHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 899999987653 11100 00 0001146888889999999988854433
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.00 E-value=8e-09 Score=86.52 Aligned_cols=111 Identities=15% Similarity=0.183 Sum_probs=82.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--C-C---cceEEEcchhhchhhhcCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--N-V---HADLINTDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~-~---~~~~~~~d~~~~~~~~~~~ 114 (256)
..+++||=+|-|.|..+.++++. .+..+|+.+||++..++.+++.+... + . ..+++.+|....+.. .++
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~----~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~-~~~ 156 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRH----KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ-TSQ 156 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTC----TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC-SSC
T ss_pred CCCCeEEEECCCchHHHHHHHHc----CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh-ccc
Confidence 46799999999999986655553 34568999999999999999987542 1 1 238999999998754 457
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+||+||.+.+-...+. . .+ ....+++.+.+.|+|||+++.-.
T Consensus 157 ~yDvIi~D~~dp~~~~-~--------~L--------~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 157 TFDVIISDCTDPIGPG-E--------SL--------FTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEEEEEESCCCCCCTT-C--------CS--------SCCHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCEEEEeCCCcCCCc-h--------hh--------cCHHHHHHHHHHhCCCCEEEEec
Confidence 8999999864211111 0 01 13578999999999999999854
No 281
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.98 E-value=2.8e-09 Score=98.08 Aligned_cols=106 Identities=18% Similarity=0.262 Sum_probs=76.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~I 119 (256)
..+.|||+|||+|-+....++...+.....+|+|||.++ +...+++.+..|++.. +++++|+.+...+ +++|+|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP---EKVDII 432 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP---EKADII 432 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS---SCEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC---cccCEE
Confidence 446899999999988555555433323345799999998 5567888899999876 9999999998544 789999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 170 (256)
|+-. .. .+...+ .+..++....+.|||||+++
T Consensus 433 VSEw--------------MG-~fLl~E----~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSEL--------------LG-SFADNE----LSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ECCC--------------CB-TTBGGG----CHHHHHHHHGGGEEEEEEEE
T ss_pred EEEc--------------Cc-cccccc----CCHHHHHHHHHhcCCCcEEc
Confidence 9932 11 111111 13467778889999999976
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.87 E-value=6.2e-09 Score=95.96 Aligned_cols=108 Identities=17% Similarity=0.104 Sum_probs=73.4
Q ss_pred CCEEEEecccccHHHHHHHHHhcccC---------CCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhh-
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEV---------PGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEK- 110 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~---------~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~- 110 (256)
.+.|||+|||+|.+...+........ ...+|+|||.++.++..++.... |++.. +++.+|+.+...+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 56899999999998643333221001 23589999999988766665554 77755 9999999988542
Q ss_pred --hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211 111 --RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 111 --~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 170 (256)
...+++|+||+-.- |-....+....++..+.+.|||||+++
T Consensus 489 ~~~~~ekVDIIVSElm-------------------Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL-------------------GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCC-------------------BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecc-------------------ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 11478999999432 100011125677888889999999876
No 283
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.82 E-value=5.1e-08 Score=81.45 Aligned_cols=130 Identities=11% Similarity=-0.005 Sum_probs=92.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccC-CCceEEEEeCCH--------------------------HHHHHHHHHHHHc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEV-PGVQYIATDINP--------------------------YAVEVTRKTLEAH 93 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~-~~~~v~giD~~~--------------------------~~i~~a~~~~~~~ 93 (256)
..++.|||+||..|..++.++..+...+ ++.+|+++|..+ ..++.+++|+...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 4578999999999999998888764322 366899999642 1467789999998
Q ss_pred CCc---ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211 94 NVH---ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY 170 (256)
Q Consensus 94 ~~~---~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 170 (256)
++. .+++.+|+.+.++....++||+|..+-- . -......++.+...|+|||+++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD----------------------~-y~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD----------------------L-YESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC----------------------S-HHHHHHHHHHHGGGEEEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC----------------------c-cccHHHHHHHHHhhcCCCEEEE
Confidence 873 3999999999887655678999998621 0 1224577899999999999999
Q ss_pred EEEeCCC--CHHHHHHHHHHcCCcE
Q 025211 171 LVTLTAN--DPSQICLQMMEKGYAA 193 (256)
Q Consensus 171 ~~~~~~~--~~~~~~~~~~~~g~~~ 193 (256)
+-..... ....+.+...+.++..
T Consensus 242 ~DD~~~~~G~~~Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 242 VDDYMMCPPCKDAVDEYRAKFDIAD 266 (282)
T ss_dssp ESSCTTCHHHHHHHHHHHHHTTCCS
T ss_pred EcCCCCCHHHHHHHHHHHHhcCCce
Confidence 8222110 1123444455566543
No 284
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.70 E-value=3.6e-08 Score=73.38 Aligned_cols=86 Identities=22% Similarity=0.239 Sum_probs=59.2
Q ss_pred cCCccccCCc--hHHHHHHHHHhhcccccCCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211 14 HPEVYEPCDD--SFALVDALLADRINLVEHHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 14 ~~~~~~p~~~--~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~ 90 (256)
+.+-+.|+-. .+.+++.+.... .++.+|||+|||+| .++..++.. .+..|+++|+++.+++
T Consensus 10 ~~~~~~~~~~~m~e~LaeYI~~~~-----~~~~rVlEVG~G~g~~vA~~La~~-----~g~~V~atDInp~Av~------ 73 (153)
T 2k4m_A 10 HSSGLVPRGSHMWNDLAVYIIRCS-----GPGTRVVEVGAGRFLYVSDYIRKH-----SKVDLVLTDIKPSHGG------ 73 (153)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHS-----CSSSEEEEETCTTCCHHHHHHHHH-----SCCEEEEECSSCSSTT------
T ss_pred ccCCcccchhhHHHHHHHHHHhcC-----CCCCcEEEEccCCChHHHHHHHHh-----CCCeEEEEECCccccc------
Confidence 3445566543 233444444432 35689999999999 587777653 3678999999998877
Q ss_pred HHcCCcceEEEcchhhchhhhcCCCccEE-EECCC
Q 025211 91 EAHNVHADLINTDIASGLEKRLAGLVDVM-VVNPP 124 (256)
Q Consensus 91 ~~~~~~~~~~~~d~~~~~~~~~~~~fD~I-i~npP 124 (256)
+++.|+++..... -+.||+| -.|||
T Consensus 74 --------~v~dDiF~P~~~~-Y~~~DLIYsirPP 99 (153)
T 2k4m_A 74 --------IVRDDITSPRMEI-YRGAALIYSIRPP 99 (153)
T ss_dssp --------EECCCSSSCCHHH-HTTEEEEEEESCC
T ss_pred --------eEEccCCCCcccc-cCCcCEEEEcCCC
Confidence 7888888764431 1489999 56888
No 285
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.58 E-value=5.4e-08 Score=80.67 Aligned_cols=122 Identities=16% Similarity=0.085 Sum_probs=85.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhc--CCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRL--AGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~fD~I 119 (256)
.+..+||+.+|||.+++++.. ++.+++.+|.++..++..++|+.. .-..++++.|....+.... ..+||+|
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS------~~d~~vfvE~~~~a~~~L~~Nl~~-~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR------SQDRLYLCELHPTEYNFLLKLPHF-NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC------TTSEEEEECCSHHHHHHHTTSCCT-TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC------CCCeEEEEeCCHHHHHHHHHHhCc-CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 457799999999999876544 235899999999999999999864 2234899999877664322 3479999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhh--ccccCeEEEEEEeCCCC--HHHHHHHHHHcCC
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADK--LLSKRGWLYLVTLTAND--PSQICLQMMEKGY 191 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~~~--~~~~~~~~~~~g~ 191 (256)
+++|||.... .+..+++.+.+ .+.++|++++..|-... ...+.+.+++.+.
T Consensus 164 fiDPPYe~k~---------------------~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 164 FIDPSYERKE---------------------EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp EECCCCCSTT---------------------HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred EECCCCCCCc---------------------HHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 9999995311 14455555443 57799999998875442 2234444444454
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.56 E-value=7.9e-07 Score=76.80 Aligned_cols=117 Identities=14% Similarity=0.181 Sum_probs=80.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc---CC---c---ceEEEcchhhchhhh
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH---NV---H---ADLINTDIASGLEKR 111 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~---~~---~---~~~~~~d~~~~~~~~ 111 (256)
.++++||=+|-|.|..+.++.+. +..+|+.+||++..++.+++.+... .. . .+++.+|...++...
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-----~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-----KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-----CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-----CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh
Confidence 35789999999999986655543 3458999999999999999865321 11 1 278899998887532
Q ss_pred --cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 112 --LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 112 --~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
...+||+||.+.+=....... . +.........+++.+.+.|+|||+++.-.
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p---~--------g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSP---E--------EDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC---------------CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhccCceeEEEECCCCCcccCcc---c--------CcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 246899999975321111000 0 00112345788999999999999998743
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.45 E-value=6.6e-07 Score=74.10 Aligned_cols=87 Identities=14% Similarity=0.048 Sum_probs=64.5
Q ss_pred HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211 27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS 106 (256)
Q Consensus 27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~ 106 (256)
|.+.+++.+. .+++..++|.+||.|..+..+++. ++.|+|+|.++.+++.|++ +.. -...++++++.+
T Consensus 10 Ll~e~le~L~---~~~gg~~VD~T~G~GGHS~~il~~------~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~ 77 (285)
T 1wg8_A 10 LYQEALDLLA---VRPGGVYVDATLGGAGHARGILER------GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRH 77 (285)
T ss_dssp THHHHHHHHT---CCTTCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGG
T ss_pred HHHHHHHhhC---CCCCCEEEEeCCCCcHHHHHHHHC------CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcch
Confidence 3344444443 257899999999999998877764 4699999999999999988 543 234899999877
Q ss_pred chh---hhcCCCccEEEECCCC
Q 025211 107 GLE---KRLAGLVDVMVVNPPY 125 (256)
Q Consensus 107 ~~~---~~~~~~fD~Ii~npP~ 125 (256)
... .....++|.|++|+.+
T Consensus 78 l~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 78 LKRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp HHHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHHcCCCCcCEEEeCCcc
Confidence 632 2223579999997764
No 288
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.39 E-value=2.7e-07 Score=75.96 Aligned_cols=136 Identities=10% Similarity=-0.011 Sum_probs=73.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
+++.+|||+|||+|.++..+++. .+-..++|+|+...+....... ...+.+...+..++.. ..+..+.||+|+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~----~~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~~dv--~~l~~~~~DlVl 145 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQ----KEVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDKTDI--HRLEPVKCDTLL 145 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTS----TTEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECSCCT--TTSCCCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHh----cCCCcceeEEEeccCccccccc-CcCCCCeEEEecccee--hhcCCCCccEEE
Confidence 57789999999999998766654 2334678888874321000000 0001122334444311 123457899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEEeC--CCCHHHHHHHHHHcCCcEEEEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVTLT--ANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~--~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
|+.-.. +... +.+ ......+++.+.+.|+|| |.+++-... .....++...++...-.+....
T Consensus 146 sD~apn-sG~~-----~~D---------~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~K 210 (277)
T 3evf_A 146 CDIGES-SSSS-----VTE---------GERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRN 210 (277)
T ss_dssp ECCCCC-CSCH-----HHH---------HHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECC
T ss_pred ecCccC-cCch-----HHH---------HHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEe
Confidence 985322 1111 000 001223478889999999 999985543 2333455666655433333333
Q ss_pred e
Q 025211 198 Q 198 (256)
Q Consensus 198 ~ 198 (256)
+
T Consensus 211 P 211 (277)
T 3evf_A 211 P 211 (277)
T ss_dssp T
T ss_pred C
Confidence 3
No 289
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.39 E-value=5.8e-06 Score=69.43 Aligned_cols=136 Identities=13% Similarity=0.213 Sum_probs=89.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCc--eEEEEeCCH--------HHHH-HHHHHHHHc----C--CcceEEEcc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGV--QYIATDINP--------YAVE-VTRKTLEAH----N--VHADLINTD 103 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~--~v~giD~~~--------~~i~-~a~~~~~~~----~--~~~~~~~~d 103 (256)
++.-+|||+|-|+|...+.....+.+..|+. .++++|..+ +..+ ..+...... + +..++..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 4567899999999998765554443334554 456777532 1111 122222221 1 122788999
Q ss_pred hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHH
Q 025211 104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQIC 183 (256)
Q Consensus 104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 183 (256)
+.+.++......||+|+.++ |.+.-.++ .| ...+++.+.++++|||++.- +.....++
T Consensus 175 a~~~l~~l~~~~~Da~flDg-FsP~kNPe--------LW---------s~e~f~~l~~~~~pgg~laT----Ytaag~VR 232 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDA-FSPYKNPE--------LW---------TLDFLSLIKERIDEKGYWVS----YSSSLSVR 232 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECC-SCTTTSGG--------GG---------SHHHHHHHHTTEEEEEEEEE----SCCCHHHH
T ss_pred HHHHHhhhcccceeEEEeCC-CCcccCcc--------cC---------CHHHHHHHHHHhCCCcEEEE----EeCcHHHH
Confidence 99887765455899999975 44333332 12 46899999999999999874 44567899
Q ss_pred HHHHHcCCcEEEEEe
Q 025211 184 LQMMEKGYAARIVVQ 198 (256)
Q Consensus 184 ~~~~~~g~~~~~~~~ 198 (256)
+.|...||.+..+..
T Consensus 233 R~L~~aGF~V~k~~G 247 (308)
T 3vyw_A 233 KSLLTLGFKVGSSRE 247 (308)
T ss_dssp HHHHHTTCEEEEEEC
T ss_pred HHHHHCCCEEEecCC
Confidence 999999999766544
No 290
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.31 E-value=2.1e-05 Score=68.33 Aligned_cols=133 Identities=16% Similarity=0.067 Sum_probs=81.0
Q ss_pred CCEEEEecccccHHHHHHHHHh----cc---------cCCCceEEEEeCC-----------HHHHHHHHHHHHHcCC--c
Q 025211 43 PVLCMEVGCGSGYVITSLALML----GQ---------EVPGVQYIATDIN-----------PYAVEVTRKTLEAHNV--H 96 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l----~~---------~~~~~~v~giD~~-----------~~~i~~a~~~~~~~~~--~ 96 (256)
..+|+|+||++|..++.+...+ .+ ..|..+|+.-|+- +...+.+++ ..+. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 6899999999999998877762 22 2467889999987 444333222 2222 2
Q ss_pred ceEEEcchhhchh-hhcCCCccEEEECCCCCCCCCccccccc------ch-hhhcCCCC-----------cHHHHHHHHH
Q 025211 97 ADLINTDIASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREG------IA-SAWAGGEN-----------GRAVIDKILP 157 (256)
Q Consensus 97 ~~~~~~d~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~------~~-~~~~~~~~-----------~~~~~~~~l~ 157 (256)
.-++.+...++-. -++++++|+|+++..++..+.......+ .+ ..+..... ....+..||+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566665555432 2346899999999888876654321110 00 00111110 0123456688
Q ss_pred HHhhccccCeEEEEEEeCCCC
Q 025211 158 SADKLLSKRGWLYLVTLTAND 178 (256)
Q Consensus 158 ~~~~~LkpgG~l~~~~~~~~~ 178 (256)
...+.|+|||++++...+...
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCT
T ss_pred HHHHHhccCCeEEEEEecCCC
Confidence 889999999999998875544
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.29 E-value=3.3e-06 Score=71.20 Aligned_cols=60 Identities=12% Similarity=0.212 Sum_probs=48.9
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH 93 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~ 93 (256)
...+++.++.... .++..|||++||+|..++++++. +..++|+|+++.+++.|++++...
T Consensus 221 p~~l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~------g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 221 PLELAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARW------GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CHHHHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3556666666542 57899999999999999887765 458999999999999999998754
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.27 E-value=7.2e-07 Score=73.58 Aligned_cols=145 Identities=12% Similarity=0.021 Sum_probs=79.6
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
..|..|. ...|.+ +.+.. .+ +++.+|||+|||.|.++..+++. .+-..++|+|+...+...+... ...+.
T Consensus 69 g~YrSRA-AfKL~e-i~eK~-~L--k~~~~VLDLGaAPGGWsQvAa~~----~gv~sV~GvdvG~d~~~~pi~~-~~~g~ 138 (282)
T 3gcz_A 69 GIAVSRG-SAKLRW-MEERG-YV--KPTGIVVDLGCGRGGWSYYAASL----KNVKKVMAFTLGVQGHEKPIMR-TTLGW 138 (282)
T ss_dssp SBCSSTH-HHHHHH-HHHTT-SC--CCCEEEEEETCTTCHHHHHHHTS----TTEEEEEEECCCCTTSCCCCCC-CBTTG
T ss_pred CCEecHH-HHHHHH-HHHhc-CC--CCCCEEEEeCCCCCHHHHHHHHh----cCCCeeeeEEeccCcccccccc-ccCCC
Confidence 4555552 333333 44433 22 57789999999999998766653 3344789999976532211100 00122
Q ss_pred cceEEEc--chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC--eEEEE
Q 025211 96 HADLINT--DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR--GWLYL 171 (256)
Q Consensus 96 ~~~~~~~--d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~ 171 (256)
+...+.. |+. .+...++|+|+|+..-. +.... .+ ......+++.+.+.|+|| |.+++
T Consensus 139 ~ii~~~~~~dv~----~l~~~~~DvVLSDmApn-sG~~~-----~D---------~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 139 NLIRFKDKTDVF----NMEVIPGDTLLCDIGES-SPSIA-----VE---------EQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp GGEEEECSCCGG----GSCCCCCSEEEECCCCC-CSCHH-----HH---------HHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred ceEEeeCCcchh----hcCCCCcCEEEecCccC-CCChH-----HH---------HHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 2222221 332 22357899999986433 22111 01 011224578888999999 99998
Q ss_pred EEeC--CCCHHHHHHHHHHc
Q 025211 172 VTLT--ANDPSQICLQMMEK 189 (256)
Q Consensus 172 ~~~~--~~~~~~~~~~~~~~ 189 (256)
-... .....++...++..
T Consensus 200 KvF~pyg~~~~~l~~~lk~~ 219 (282)
T 3gcz_A 200 KVLCPYTPLIMEELSRLQLK 219 (282)
T ss_dssp EESCCCSHHHHHHHHHHHHH
T ss_pred EEecCCCccHHHHHHHHHHh
Confidence 5543 23334556666554
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.25 E-value=1.3e-06 Score=73.57 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=59.5
Q ss_pred eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
.++++|+.+.+....+++||+|++||||+............ ............+..++.++.++|||||.+++......
T Consensus 23 ~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~-~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 23 RLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQL-GHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CC-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred EEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhh-cccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 89999999976655568999999999998643211100000 00000011122356778899999999999998654211
Q ss_pred -------------CHHHHHHHHHHcCCcE
Q 025211 178 -------------DPSQICLQMMEKGYAA 193 (256)
Q Consensus 178 -------------~~~~~~~~~~~~g~~~ 193 (256)
....+...+.+.||..
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~ 130 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDN 130 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEE
T ss_pred cccccCCcccccccHHHHHHHHHHcCCee
Confidence 1246777888889865
No 294
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.17 E-value=1.3e-05 Score=69.45 Aligned_cols=135 Identities=14% Similarity=0.126 Sum_probs=81.2
Q ss_pred CCEEEEecccccHHHHHHHHHhc-----------ccCCCceEEEEeCCHHHHHHHHHHHHHcC-----------C--cce
Q 025211 43 PVLCMEVGCGSGYVITSLALMLG-----------QEVPGVQYIATDINPYAVEVTRKTLEAHN-----------V--HAD 98 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~-----------~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----------~--~~~ 98 (256)
+.+|+|+|||+|..++.+...+- ...|..+|+.-|+-.+.....=+.+.... . ..-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 68999999999999888744321 12378899999988877655544433211 0 112
Q ss_pred EEEcchhhch-hhhcCCCccEEEECCCCCCCCCccccccc-chhhh------cCCCC----------cHHHHHHHHHHHh
Q 025211 99 LINTDIASGL-EKRLAGLVDVMVVNPPYVPTPEDEVGREG-IASAW------AGGEN----------GRAVIDKILPSAD 160 (256)
Q Consensus 99 ~~~~d~~~~~-~~~~~~~fD~Ii~npP~~~~~~~~~~~~~-~~~~~------~~~~~----------~~~~~~~~l~~~~ 160 (256)
+..+...++- ..+++++||+|+++..++..+.......+ ...+| ..... ....+..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333321 12346899999999988876653321110 00000 00000 0123556788899
Q ss_pred hccccCeEEEEEEeCCC
Q 025211 161 KLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 161 ~~LkpgG~l~~~~~~~~ 177 (256)
+.|+|||++++...+..
T Consensus 213 ~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHEEEEEEEEEEEEECC
T ss_pred HHhCCCCEEEEEEecCC
Confidence 99999999999877554
No 295
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.16 E-value=3.8e-05 Score=65.99 Aligned_cols=156 Identities=15% Similarity=0.126 Sum_probs=88.6
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCC-ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhc-CCCccEEE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPG-VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRL-AGLVDVMV 120 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~-~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~fD~Ii 120 (256)
..+|+|+.||.|.+++.+... +-+ -.++++|+++.+++..+.|.. ...++.+|+.+...... ...+|+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~----G~~~~~v~~~E~d~~a~~~~~~N~~----~~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES----CIPAQVVAAIDVNTVANEVYKYNFP----HTQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH----TCSEEEEEEECCCHHHHHHHHHHCT----TSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccHHHHHHHHC----CCCceEEEEEeCCHHHHHHHHHhcc----ccccccCCHHHccHhHcCcCCcCEEE
Confidence 468999999999999888776 211 259999999999999888863 22577888887643211 12699999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc--cCeEEEEEEeC---CCCHHHHHHHHHHcCCcEEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS--KRGWLYLVTLT---ANDPSQICLQMMEKGYAARI 195 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk--pgG~l~~~~~~---~~~~~~~~~~~~~~g~~~~~ 195 (256)
.+||....+...... . . .+.++ .....+++ +...++ |.-+++=.... ......+.+.+.+.||.+..
T Consensus 74 ~gpPCq~fS~ag~~~-g----~-~d~r~-~l~~~~~~-~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 74 MSPPCQPFTRIGRQG-D----M-TDSRT-NSFLHILD-ILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp ECCC-------------------------CHHHHHHH-HGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred EcCCCcchhhcCCcC-C----c-cCccc-hHHHHHHH-HHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeEE
Confidence 999976555432110 0 0 01110 11233343 334556 66443311121 11234677788888987654
Q ss_pred EEe------cCCCCccEEEEEEEec
Q 025211 196 VVQ------RSTEEENLHIIKFWRD 214 (256)
Q Consensus 196 ~~~------~~~~~~~~~l~~~~~~ 214 (256)
... ..+..++++++-.+++
T Consensus 146 ~vl~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 146 FLLSPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp EEECGGGGTCSCCCCEEEEEEEESS
T ss_pred EEEEHHHCCCCCcccEEEEEEEeCC
Confidence 321 2345677777776654
No 296
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.09 E-value=9.6e-06 Score=66.95 Aligned_cols=62 Identities=18% Similarity=0.263 Sum_probs=48.2
Q ss_pred hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
...|++.++... ..++..|||++||+|..++++.++ +..++|+|+++.+++.+++++..+++
T Consensus 198 p~~l~~~~i~~~----~~~~~~vlD~f~GsGtt~~~a~~~------gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 198 PRDLIERIIRAS----SNPNDLVLDCFMGSGTTAIVAKKL------GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CHHHHHHHHHHH----CCTTCEEEESSCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 355666665554 368899999999999999887765 34899999999999999999876553
No 297
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.08 E-value=0.00018 Score=61.32 Aligned_cols=152 Identities=14% Similarity=0.088 Sum_probs=91.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
.+.+|+|++||+|.+++.+.+. +. -.+.++|+++.+++..+.|... ..++|+.+...... ..+|+|+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~a----G~-~~v~~~e~d~~a~~t~~~N~~~------~~~~Di~~~~~~~~-~~~D~l~~ 77 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESC----GA-ECVYSNEWDKYAQEVYEMNFGE------KPEGDITQVNEKTI-PDHDILCA 77 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT----TC-EEEEEECCCHHHHHHHHHHHSC------CCBSCGGGSCGGGS-CCCSEEEE
T ss_pred CCCcEEEECCCcCHHHHHHHHC----CC-eEEEEEeCCHHHHHHHHHHcCC------CCcCCHHHcCHhhC-CCCCEEEE
Confidence 3579999999999998877665 22 2588999999999999888642 11678877654322 35999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------CHHHHHHHHHHcCCcEEE
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------DPSQICLQMMEKGYAARI 195 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~~~~~~~~~~g~~~~~ 195 (256)
.||+...+...... .+. ++++ ..+..+++-+ +.++|.-+++=..+... ....+.+.+.+.||.+..
T Consensus 78 gpPCQ~fS~ag~~~-----g~~-d~r~-~L~~~~~r~i-~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 78 GFPCQAFSISGKQK-----GFE-DSRG-TLFFDIARIV-REKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp ECCCTTTCTTSCCC-----GGG-STTS-CHHHHHHHHH-HHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred CCCCCCcchhcccC-----CCc-chhh-HHHHHHHHHH-HhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 99998776643211 011 1111 1233444433 34688633332222221 123577777888887543
Q ss_pred EE--e----cCCCCccEEEEEEEe
Q 025211 196 VV--Q----RSTEEENLHIIKFWR 213 (256)
Q Consensus 196 ~~--~----~~~~~~~~~l~~~~~ 213 (256)
.. . ..+..++++++-.++
T Consensus 150 ~vl~a~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 150 KVLNALDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEBG
T ss_pred EEEEHHHcCCCccceEEEEEEEeC
Confidence 22 1 123456666666554
No 298
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.06 E-value=0.00021 Score=62.07 Aligned_cols=151 Identities=12% Similarity=0.051 Sum_probs=89.0
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh------cCCCcc
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR------LAGLVD 117 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~------~~~~fD 117 (256)
.+|+|+.||.|.+++.+.+. +.+ .+.++|+++.+++..+.|.. ...++++|+.+..... ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a----G~~-~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA----GFD-VKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH----TCE-EEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC----CCc-EEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCee
Confidence 47999999999998887776 221 47799999999988887742 2367888887764321 236799
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcH-HHHHHHHHHHhhccccCeEEEEEEeCCCC------HHHHHHHHHHcC
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGR-AVIDKILPSADKLLSKRGWLYLVTLTAND------PSQICLQMMEKG 190 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~g 190 (256)
+|+..||....+..... +..+.. ..+..+++ +...++|.-+++=..+.... .+.+. .+.+.|
T Consensus 74 ~i~ggpPCQ~fS~ag~~---------~~~d~r~~L~~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~G 142 (376)
T 3g7u_A 74 GIIGGPPCQGFSSIGKG---------NPDDSRNQLYMHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGD 142 (376)
T ss_dssp EEEECCCCCTTC----------------CHHHHHHHHHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTT
T ss_pred EEEecCCCCCcccccCC---------CCCCchHHHHHHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCC
Confidence 99999997655543211 001111 12333333 34456886444422222211 23455 778889
Q ss_pred CcE---EEEEe----cCCCCccEEEEEEEec
Q 025211 191 YAA---RIVVQ----RSTEEENLHIIKFWRD 214 (256)
Q Consensus 191 ~~~---~~~~~----~~~~~~~~~l~~~~~~ 214 (256)
|.+ ..+.. ..+...+++++-.+++
T Consensus 143 Y~v~~~~vl~a~dyGvPQ~R~R~~iig~r~~ 173 (376)
T 3g7u_A 143 YDILDPIKVKASDYGAPTIRTRYFFIGVKKS 173 (376)
T ss_dssp EEECCCEEEEGGGGTCSBCCEEEEEEEEEGG
T ss_pred CccCcEEEEEHhhCCCCCCCcEEEEEEEeCC
Confidence 876 22222 1244567776666554
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.02 E-value=0.00014 Score=60.13 Aligned_cols=137 Identities=12% Similarity=0.082 Sum_probs=81.4
Q ss_pred HHHHHhhcc--cccCCCCEEEEecc------cccHHHHHHHHHhcccCCC-ceEEEEeCCHHHHHHHHHHHHHcCCcceE
Q 025211 29 DALLADRIN--LVEHHPVLCMEVGC------GSGYVITSLALMLGQEVPG-VQYIATDINPYAVEVTRKTLEAHNVHADL 99 (256)
Q Consensus 29 ~~l~~~~~~--~~~~~~~~VLDlGc------G~G~~~~~l~~~l~~~~~~-~~v~giD~~~~~i~~a~~~~~~~~~~~~~ 99 (256)
..+-++++. +.-..+.+|||+|+ ..|.. .+.+. .|+ +.|+++|+.+-.. ....+
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~----~p~g~~VVavDL~~~~s-----------da~~~ 156 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQW----LPTGTLLVDSDLNDFVS-----------DADST 156 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHH----SCTTCEEEEEESSCCBC-----------SSSEE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHh----CCCCcEEEEeeCccccc-----------CCCeE
Confidence 345555543 22246899999996 66773 23333 454 6999999988531 11256
Q ss_pred EEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH
Q 025211 100 INTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP 179 (256)
Q Consensus 100 ~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 179 (256)
+++|+..... .++||+|+++..=..+.... ..........+.+++.+.+.|+|||.+++-.......
T Consensus 157 IqGD~~~~~~---~~k~DLVISDMAPNtTG~~D----------~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~ 223 (344)
T 3r24_A 157 LIGDCATVHT---ANKWDLIISDMYDPRTKHVT----------KENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN 223 (344)
T ss_dssp EESCGGGEEE---SSCEEEEEECCCCTTSCSSC----------SCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC
T ss_pred EEcccccccc---CCCCCEEEecCCCCcCCccc----------cchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH
Confidence 9999766433 37899999976311111100 0000122346788899999999999999865544443
Q ss_pred HHHHHHHHHcCCcEEEEE
Q 025211 180 SQICLQMMEKGYAARIVV 197 (256)
Q Consensus 180 ~~~~~~~~~~g~~~~~~~ 197 (256)
+++.+ +.+ .|......
T Consensus 224 ~~L~~-lrk-~F~~VK~f 239 (344)
T 3r24_A 224 ADLYK-LMG-HFSWWTAF 239 (344)
T ss_dssp HHHHH-HHT-TEEEEEEE
T ss_pred HHHHH-HHh-hCCeEEEE
Confidence 44444 333 55544333
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.00 E-value=0.00022 Score=61.30 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=50.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
+++.+|||+||++|.++..+++. ++.|+|||+.+-. .. +... -...++++|.....++ .++||+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r------g~~V~aVD~~~l~-~~----l~~~-~~V~~~~~d~~~~~~~--~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR------NMWVYSVDNGPMA-QS----LMDT-GQVTWLREDGFKFRPT--RSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT------TCEEEEECSSCCC-HH----HHTT-TCEEEECSCTTTCCCC--SSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC------CCEEEEEEhhhcC-hh----hccC-CCeEEEeCccccccCC--CCCcCEEE
Confidence 58999999999999998877664 5699999976421 11 1111 1238888998876543 46899999
Q ss_pred ECCC
Q 025211 121 VNPP 124 (256)
Q Consensus 121 ~npP 124 (256)
|+..
T Consensus 276 sDm~ 279 (375)
T 4auk_A 276 CDMV 279 (375)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 9764
No 301
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.95 E-value=1.8e-05 Score=65.66 Aligned_cols=145 Identities=10% Similarity=0.027 Sum_probs=78.6
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
+.|..|. ...|.+ +.+. ..+ .++.+|||+||++|.++..+++. .+-..|+|+|+...+...... +...+.
T Consensus 60 g~yrSRa-a~KL~e-i~ek-~l~--~~g~~vlDLGaaPGgWsqva~~~----~gv~sV~Gvdlg~~~~~~P~~-~~~~~~ 129 (300)
T 3eld_A 60 GISVSRG-AAKIRW-LHER-GYL--RITGRVLDLGCGRGGWSYYAAAQ----KEVMSVKGYTLGIEGHEKPIH-MQTLGW 129 (300)
T ss_dssp CCCSSTT-HHHHHH-HHHH-TSC--CCCEEEEEETCTTCHHHHHHHTS----TTEEEEEEECCCCTTSCCCCC-CCBTTG
T ss_pred CCccchH-HHHHHH-HHHh-CCC--CCCCEEEEcCCCCCHHHHHHHHh----cCCceeeeEEecccccccccc-ccccCC
Confidence 4666664 334444 3333 222 58899999999999998777654 223468899987532110000 000011
Q ss_pred cc-eEEEc-chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEE
Q 025211 96 HA-DLINT-DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLV 172 (256)
Q Consensus 96 ~~-~~~~~-d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 172 (256)
+. .+... |+. .+....+|+|+|+..-. +.... .+ ......++..+.+.|+|| |.+++-
T Consensus 130 ~iv~~~~~~di~----~l~~~~~DlVlsD~APn-sG~~~-----~D---------~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 130 NIVKFKDKSNVF----TMPTEPSDTLLCDIGES-SSNPL-----VE---------RDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp GGEEEECSCCTT----TSCCCCCSEEEECCCCC-CSSHH-----HH---------HHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred ceEEeecCceee----ecCCCCcCEEeecCcCC-CCCHH-----HH---------HHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 12 22211 222 22346899999985322 21110 00 011234588888999999 999985
Q ss_pred EeC--CCCHHHHHHHHHHc
Q 025211 173 TLT--ANDPSQICLQMMEK 189 (256)
Q Consensus 173 ~~~--~~~~~~~~~~~~~~ 189 (256)
... .....++...++..
T Consensus 191 vF~~yG~~~~~ll~~lk~~ 209 (300)
T 3eld_A 191 VLAPYHPDVIEKLERLQLR 209 (300)
T ss_dssp ESSTTSHHHHHHHHHHHHH
T ss_pred eccccCccHHHHHHHHHHh
Confidence 543 33334556666554
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.89 E-value=7.3e-05 Score=64.26 Aligned_cols=76 Identities=8% Similarity=0.027 Sum_probs=56.0
Q ss_pred HHHHHHHHHhhcccccC----CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEE
Q 025211 25 FALVDALLADRINLVEH----HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLI 100 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~----~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~ 100 (256)
.-+++.|.+.+. +... ++..|||||.|.|.+|..++.... ..+|+++|+++..+...++.. . .-+.+++
T Consensus 38 ~~i~~~Iv~~~~-l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~----~~~vvavE~D~~l~~~L~~~~-~-~~~l~ii 110 (353)
T 1i4w_A 38 PTVYNKIFDKLD-LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC----PRQYSLLEKRSSLYKFLNAKF-E-GSPLQIL 110 (353)
T ss_dssp HHHHHHHHHHHC-GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC----CSEEEEECCCHHHHHHHHHHT-T-TSSCEEE
T ss_pred HHHHHHHHHhcc-CCcccCcCCCCEEEEECCCCCHHHHHHHhhCC----CCEEEEEecCHHHHHHHHHhc-c-CCCEEEE
Confidence 556666666654 2111 468999999999999998887532 238999999999999888766 2 2234899
Q ss_pred Ecchhhc
Q 025211 101 NTDIASG 107 (256)
Q Consensus 101 ~~d~~~~ 107 (256)
.+|+.++
T Consensus 111 ~~D~l~~ 117 (353)
T 1i4w_A 111 KRDPYDW 117 (353)
T ss_dssp CSCTTCH
T ss_pred ECCccch
Confidence 9998765
No 303
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.84 E-value=3e-05 Score=65.71 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=62.8
Q ss_pred HHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc
Q 025211 28 VDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG 107 (256)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~ 107 (256)
.+.+++.+. .+++..++|..||.|..+..+++.+ .+++.|+|+|.++.+++.++ ++ ..-...++++++.+.
T Consensus 46 l~Evl~~L~---i~pggiyVD~TlG~GGHS~~iL~~l---g~~GrVig~D~Dp~Al~~A~-rL--~~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 46 LDEAVNGLN---IRPDGIYIDGTFGRGGHSRLILSQL---GEEGRLLAIDRDPQAIAVAK-TI--DDPRFSIIHGPFSAL 116 (347)
T ss_dssp THHHHHHTC---CCTTCEEEESCCTTSHHHHHHHTTC---CTTCEEEEEESCHHHHHHHT-TC--CCTTEEEEESCGGGH
T ss_pred HHHHHHhhC---CCCCCEEEEeCcCCCHHHHHHHHhC---CCCCEEEEEECCHHHHHHHH-hh--cCCcEEEEeCCHHHH
Confidence 344444443 3688999999999999987777654 46779999999999999884 33 222237888888776
Q ss_pred hhhhc----CCCccEEEECCCC
Q 025211 108 LEKRL----AGLVDVMVVNPPY 125 (256)
Q Consensus 108 ~~~~~----~~~fD~Ii~npP~ 125 (256)
..-.. .+++|.|+.|..+
T Consensus 117 ~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 117 GEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHHHHHTTCTTCEEEEEEECSC
T ss_pred HHHHHhcCCCCcccEEEECCcc
Confidence 43211 1369999996544
No 304
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.81 E-value=7.7e-05 Score=63.49 Aligned_cols=89 Identities=15% Similarity=0.091 Sum_probs=58.2
Q ss_pred eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-
Q 025211 98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA- 176 (256)
Q Consensus 98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~- 176 (256)
.++++|..+.+....+++||+|+++|||.......-... .... -...+...+..+.++|+|||.+++.....
T Consensus 16 ~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~-~~~~------~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~ 88 (323)
T 1boo_A 16 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNL-EQHE------YVDWFLSFAKVVNKKLKPDGSFVVDFGGAY 88 (323)
T ss_dssp EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSC-HHHH------HHHHHHHHHHHHHHHEEEEEEEEEEECCCE
T ss_pred eEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCc-CHHH------HHHHHHHHHHHHHHHCcCCcEEEEEECCEe
Confidence 789999988766555689999999999975432110000 0000 02246678889999999999999965432
Q ss_pred -C--------CHHHHHHHHHHcCCcE
Q 025211 177 -N--------DPSQICLQMMEKGYAA 193 (256)
Q Consensus 177 -~--------~~~~~~~~~~~~g~~~ 193 (256)
. ....+...+...||..
T Consensus 89 ~~g~~~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 89 MKGVPARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp ETTEEEECCHHHHHHHHHHHTTCCEE
T ss_pred cCCCcccccchHHHHHHHHHhCCCEE
Confidence 1 1224455667788865
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.79 E-value=4.2e-05 Score=63.04 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=59.6
Q ss_pred eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211 98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN 177 (256)
Q Consensus 98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (256)
.++++|..+.+....+++||+|+++|||......-. ....... -...+...+..+.++|+|+|.+++.....
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d-~~~~~~~------y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~- 77 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWD-SFDSHNE------FLAFTYRWIDKVLDKLDKDGSLYIFNTPF- 77 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGG-CCSSHHH------HHHHHHHHHHHHHHHEEEEEEEEEEECHH-
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCccccc-ccCCHHH------HHHHHHHHHHHHHHHhcCCeEEEEEcCcH-
Confidence 788999988876666679999999999975411100 0000000 01245677888899999999999864322
Q ss_pred CHHHHHHHHHHcCCcE--EEEEec
Q 025211 178 DPSQICLQMMEKGYAA--RIVVQR 199 (256)
Q Consensus 178 ~~~~~~~~~~~~g~~~--~~~~~~ 199 (256)
....+...+.+.||.. ..++.+
T Consensus 78 ~~~~~~~~~~~~gf~~~~~iiW~K 101 (260)
T 1g60_A 78 NCAFICQYLVSKGMIFQNWITWDK 101 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECC
T ss_pred HHHHHHHHHHhhccceeEEEEEEe
Confidence 2334556677778764 344533
No 306
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.78 E-value=3.9e-05 Score=66.07 Aligned_cols=135 Identities=14% Similarity=0.093 Sum_probs=84.0
Q ss_pred CCCEEEEecccccHHHHHHHHH----h-------cc-cCCCceEEEEeCCHHHHHHHHHHHHHcCC--cceEEEcchhhc
Q 025211 42 HPVLCMEVGCGSGYVITSLALM----L-------GQ-EVPGVQYIATDINPYAVEVTRKTLEAHNV--HADLINTDIASG 107 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~----l-------~~-~~~~~~v~giD~~~~~i~~a~~~~~~~~~--~~~~~~~d~~~~ 107 (256)
...+|+|+||++|..++.+... + .+ ..|..+|+..|+-.+....+-+.+..... ..-+..+...++
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 4578999999999876654433 1 11 35778999999999988877666543111 124555554443
Q ss_pred hh-hhcCCCccEEEECCCCCCCCCccccccc-chhhhcCCC--------C---cHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 108 LE-KRLAGLVDVMVVNPPYVPTPEDEVGREG-IASAWAGGE--------N---GRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 108 ~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~-~~~~~~~~~--------~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
-. -++++++|+|+++...+..+.......+ ....+.... . ....+..+|+...+.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 22 3346899999999887776653211110 000000000 0 123566789999999999999999776
Q ss_pred CC
Q 025211 175 TA 176 (256)
Q Consensus 175 ~~ 176 (256)
+.
T Consensus 211 gr 212 (359)
T 1m6e_X 211 GR 212 (359)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 307
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.75 E-value=0.0006 Score=58.03 Aligned_cols=155 Identities=12% Similarity=0.091 Sum_probs=91.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCc-eE-EEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh-cCCCccE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGV-QY-IATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR-LAGLVDV 118 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~-~v-~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~fD~ 118 (256)
...+++|+.||.|.+.+.+.+. +-++ .+ .++|+++.+++..+.|... .++.+|+.+..... ....+|+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a----G~~~~~v~~a~e~d~~a~~ty~~N~~~-----~~~~~DI~~~~~~~i~~~~~Di 79 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS----SININATFIPFDINEIANKIYSKNFKE-----EVQVKNLDSISIKQIESLNCNT 79 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS----SCCCCEEEEEECCCHHHHHHHHHHHCC-----CCBCCCTTTCCHHHHHHTCCCE
T ss_pred CCCEEEEECCChhHHHHHHHHc----CCCceEEEEEEECCHHHHHHHHHHCCC-----CcccCChhhcCHHHhccCCCCE
Confidence 4579999999999988776654 2212 45 7999999999998888632 25667777664321 1237999
Q ss_pred EEECCCCCCC--CCcccccccchhhhcCCCCcHHHHHHHHHHHhhcc--ccCeEEEEEEeCCC-----CHHHHHHHHHHc
Q 025211 119 MVVNPPYVPT--PEDEVGREGIASAWAGGENGRAVIDKILPSADKLL--SKRGWLYLVTLTAN-----DPSQICLQMMEK 189 (256)
Q Consensus 119 Ii~npP~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L--kpgG~l~~~~~~~~-----~~~~~~~~~~~~ 189 (256)
++..||-... +..... . . ..+.++ .....+++.+.+.+ +|. +++++.... ....+.+.+++.
T Consensus 80 l~ggpPCQ~fs~S~ag~~--~---~-~~d~r~-~L~~~~~r~~i~~~~~~P~--~~~lENV~gl~~~~~~~~i~~~l~~~ 150 (327)
T 3qv2_A 80 WFMSPPCQPYNNSIMSKH--K---D-INDPRA-KSVLHLYRDILPYLINKPK--HIFIENVPLFKESLVFKEIYNILIKN 150 (327)
T ss_dssp EEECCCCTTCSHHHHTTT--C---T-TTCGGG-HHHHHHHHTTGGGCSSCCS--EEEEEECGGGGGSHHHHHHHHHHHHT
T ss_pred EEecCCccCcccccCCCC--C---C-Cccccc-hhHHHHHHHHHHHhccCCC--EEEEEchhhhcChHHHHHHHHHHHhC
Confidence 9999997655 221100 0 0 001111 12334444244445 564 333343222 234677888888
Q ss_pred CCcEEEEEec------CCCCccEEEEEEEec
Q 025211 190 GYAARIVVQR------STEEENLHIIKFWRD 214 (256)
Q Consensus 190 g~~~~~~~~~------~~~~~~~~l~~~~~~ 214 (256)
||........ .+..++++++-.+++
T Consensus 151 GY~v~~~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 151 QYYIKDIICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp TCEEEEEEECGGGGTCSBCCCEEEEEEESSC
T ss_pred CCEEEEEEEeHHHcCCCccceEEEEEEEeCC
Confidence 9986543322 234567776665544
No 308
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.66 E-value=0.00012 Score=58.71 Aligned_cols=126 Identities=10% Similarity=0.052 Sum_probs=73.8
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
+.|..| ..+=.+++.+.. .+ +++.+|+|+||++|.++..++.. .....|+|+|+-+.-.+. ...++..|+
T Consensus 57 g~yrSR--a~~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~----~g~~~V~avdvG~~ghe~-P~~~~s~gw 126 (267)
T 3p8z_A 57 HHAVSR--GSAKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGL----KKVTEVRGYTKGGPGHEE-PVPMSTYGW 126 (267)
T ss_dssp SCCSST--HHHHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCC-CCCCCCTTT
T ss_pred CCccch--HHHHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHh----cCCCEEEEEecCCCCccC-cchhhhcCc
Confidence 345444 233334455544 22 57889999999999998766654 222379999987653321 011123456
Q ss_pred cc-eEEEc-chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 96 HA-DLINT-DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 96 ~~-~~~~~-d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
+. .+..+ |+.... +.++|.|+|+.-= .++.. +.+ ..-..+.|+.+.+.|++ |-+++
T Consensus 127 n~v~fk~gvDv~~~~----~~~~DtllcDIge-Ss~~~-----~vE---------~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 127 NIVKLMSGKDVFYLP----PEKCDTLLCDIGE-SSPSP-----TVE---------ESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp TSEEEECSCCGGGCC----CCCCSEEEECCCC-CCSCH-----HHH---------HHHHHHHHHHHGGGCSS-CEEEE
T ss_pred CceEEEeccceeecC----CccccEEEEecCC-CCCCh-----hhh---------hhHHHHHHHHHHHhccc-CCEEE
Confidence 65 88888 875542 2579999997521 11111 111 01123467777888998 55555
No 309
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.64 E-value=0.00011 Score=59.75 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=60.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeC--CHHHHHHHHHHHHHcCCcc-eEEEc-chhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDI--NPYAVEVTRKTLEAHNVHA-DLINT-DIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~--~~~~i~~a~~~~~~~~~~~-~~~~~-d~~~~~~~~~~~~ 115 (256)
+++.+|+|+||+.|.++..+++...- .. .+.++|+|+ .|-... ..++.. .+.++ |+.+. ....
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~v-g~V~G~vig~D~~~~P~~~~-------~~Gv~~i~~~~G~Df~~~----~~~~ 139 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNV-QEVRGYTKGGPGHEEPMLMQ-------SYGWNIVTMKSGVDVFYK----PSEI 139 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTE-EEEEEECCCSTTSCCCCCCC-------STTGGGEEEECSCCGGGS----CCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCC-CCceeEEEccccccCCCccc-------CCCceEEEeeccCCccCC----CCCC
Confidence 68999999999999998777664110 01 124555552 111000 012222 44446 88773 2357
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe-EEEEEEe
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG-WLYLVTL 174 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG-~l~~~~~ 174 (256)
+|+|+|+..=. +.... .+. ...+ .+++.+.+.|+||| .+++-..
T Consensus 140 ~DvVLSDMAPn-SG~~~-----vD~--------~Rs~-~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAE-----IEE--------QRTL-RILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp CSEEEECCCCC-CSCHH-----HHH--------HHHH-HHHHHHHHHHTTCCSEEEEEES
T ss_pred CCEEEeCCCCC-CCccH-----HHH--------HHHH-HHHHHHHHHhhcCCcEEEEEEC
Confidence 99999986312 21110 000 0012 26777889999999 7776443
No 310
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.61 E-value=0.00041 Score=58.91 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=59.7
Q ss_pred eEE-EcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 98 DLI-NTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 98 ~~~-~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
.++ ++|..+.+....+++||+|+++|||....+. |.....-...+...+..+.++|+|||.+++.....
T Consensus 40 ~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~----------~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 40 HVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLAD----------WDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGG----------GGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred eEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCC----------ccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 788 9999988766556799999999999754110 11111112346677888999999999999865432
Q ss_pred CC-------HHHHHHHHHHcC-CcE--EEEEec
Q 025211 177 ND-------PSQICLQMMEKG-YAA--RIVVQR 199 (256)
Q Consensus 177 ~~-------~~~~~~~~~~~g-~~~--~~~~~~ 199 (256)
.. ...+...+...| |.. ..++.+
T Consensus 110 ~~~~~~~~~l~~l~~~i~~~G~~~~~~~IIW~K 142 (319)
T 1eg2_A 110 YQGEAGSGDLISIISHMRQNSKMLLANLIIWNY 142 (319)
T ss_dssp CCCCTTBCCHHHHHHHHHHHCCCEEEEEEEEEC
T ss_pred cccccccccHHHHHHHHhCcccceeEEEEEEEC
Confidence 22 145555555555 553 445543
No 311
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.54 E-value=0.0009 Score=62.70 Aligned_cols=135 Identities=16% Similarity=0.263 Sum_probs=88.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcc---cCC-----CceEEEEeCCHHHHHHHHH--------------HHHHc-----
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQ---EVP-----GVQYIATDINPYAVEVTRK--------------TLEAH----- 93 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~---~~~-----~~~v~giD~~~~~i~~a~~--------------~~~~~----- 93 (256)
++.-+|+|+|.|+|...+.+.+...+ ..| ..+++++|..|...+.+++ .+...
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 45679999999999998888775421 112 2579999995433333322 11111
Q ss_pred C----------CcceEEEcchhhchhhhc---CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh
Q 025211 94 N----------VHADLINTDIASGLEKRL---AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD 160 (256)
Q Consensus 94 ~----------~~~~~~~~d~~~~~~~~~---~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (256)
+ +..++..+|+.+.++... ...+|+++.++ |.+.-+++ .| ...++..+.
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~-f~p~~np~--------~w---------~~~~~~~l~ 198 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG-FAPAKNPD--------MW---------NEQLFNAMA 198 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS-SCC--CCT--------TC---------SHHHHHHHH
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC-CCCCCChh--------hh---------hHHHHHHHH
Confidence 1 122688899988876542 46899999976 32222211 11 367888999
Q ss_pred hccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211 161 KLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 161 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
+++++||.+.. +.....+++.+.+.||......
T Consensus 199 ~~~~~g~~~~t----~~~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 199 RMTRPGGTFST----FTAAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp HHEEEEEEEEE----SCCCHHHHHHHHHTTCEEEEEE
T ss_pred HHhCCCCEEEe----ccCcHHHHHHHHhCCeEEEecc
Confidence 99999998775 3345788999999999876554
No 312
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.52 E-value=0.0028 Score=53.99 Aligned_cols=153 Identities=13% Similarity=0.048 Sum_probs=92.3
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCC-ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh-cCCCccEEEE
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPG-VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR-LAGLVDVMVV 121 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~-~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~fD~Ii~ 121 (256)
-+++|+.||.|.+.+.+... +.+ -.+.++|+++.+++..+.|.. ...++.+|+.+..... ....+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~a----G~~~~~v~a~e~d~~a~~ty~~N~~----~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES----GLDGEIVAAVDINTVANSVYKHNFP----ETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH----TCSEEEEEEECCCHHHHHHHHHHCT----TSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHc----CCCceEEEEEeCCHHHHHHHHHhCC----CCceeccccccCCHHHhccCCCCEEEe
Confidence 57999999999988777665 222 258899999999988877753 2256778887764322 2246999999
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc-cCeEEEEEEeCCC-----CHHHHHHHHHHcCCcEEE
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS-KRGWLYLVTLTAN-----DPSQICLQMMEKGYAARI 195 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~-----~~~~~~~~~~~~g~~~~~ 195 (256)
.||-...+....... . .+.++ ..+..+++- .+.++ |. +++++.... ..+.+.+.+++.||.+..
T Consensus 76 gpPCQ~fS~ag~~~~-----~-~d~r~-~L~~~~~r~-i~~~~~P~--~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~ 145 (333)
T 4h0n_A 76 SPPCQPFTRNGKYLD-----D-NDPRT-NSFLYLIGI-LDQLDNVD--YILMENVKGFENSTVRNLFIDKLKECNFIYQE 145 (333)
T ss_dssp CCCCCCSEETTEECC-----T-TCTTS-CCHHHHHHH-GGGCTTCC--EEEEEECTTGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred cCCCcchhhhhhccC-----C-cCccc-ccHHHHHHH-HHHhcCCC--EEEEecchhhhhhhHHHHHHHHHHhCCCeEEE
Confidence 999876554321100 0 11111 012334433 33454 64 333344332 235678888888987654
Q ss_pred EEec------CCCCccEEEEEEEec
Q 025211 196 VVQR------STEEENLHIIKFWRD 214 (256)
Q Consensus 196 ~~~~------~~~~~~~~l~~~~~~ 214 (256)
.... .+..++++++-.+++
T Consensus 146 ~vl~a~~~GvPQ~R~R~fiva~r~~ 170 (333)
T 4h0n_A 146 FLLCPSTVGVPNSRLRYYCTARRNN 170 (333)
T ss_dssp EEECTTTTTCSCCCCEEEEEEEETT
T ss_pred EEecHHHcCCCccceEEEEEEEeCC
Confidence 3322 234577777766655
No 313
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.49 E-value=0.0026 Score=53.97 Aligned_cols=149 Identities=14% Similarity=0.109 Sum_probs=90.9
Q ss_pred EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCC
Q 025211 45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPP 124 (256)
Q Consensus 45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP 124 (256)
+|+|+.||.|.+.+.+.+. +-+ .+.++|+++.+++.-+.|. +..++.+|+.+..... -..+|+++..||
T Consensus 2 kvidLFsG~GG~~~G~~~a----G~~-~v~a~e~d~~a~~ty~~N~-----~~~~~~~DI~~i~~~~-~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA----GFR-IICANEYDKSIWKTYESNH-----SAKLIKGDISKISSDE-FPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT----TCE-EEEEEECCTTTHHHHHHHC-----CSEEEESCGGGCCGGG-SCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHC----CCE-EEEEEeCCHHHHHHHHHHC-----CCCcccCChhhCCHhh-CCcccEEEecCC
Confidence 6999999999988766554 222 5789999999998877764 3478889998875432 246999999998
Q ss_pred CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC--------CHHHHHHHHHHcCCcEEEE
Q 025211 125 YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------DPSQICLQMMEKGYAARIV 196 (256)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~~~~~~g~~~~~~ 196 (256)
--..+...... -..++++ ..+..+++ +.+.++|.-.++ +.... ....+.+.+.+.||.+...
T Consensus 71 CQ~fS~ag~~~------g~~d~R~-~L~~~~~r-~i~~~~Pk~~~~--ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~ 140 (331)
T 3ubt_Y 71 SQSWSEGGSLR------GIDDPRG-KLFYEYIR-ILKQKKPIFFLA--ENVKGMMAQRHNKAVQEFIQEFDNAGYDVHII 140 (331)
T ss_dssp GGGTEETTEEC------CTTCGGG-HHHHHHHH-HHHHHCCSEEEE--EECCGGGGCTTSHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCcCCCCCcc------CCCCchh-HHHHHHHH-HHhccCCeEEEe--eeecccccccccchhhhhhhhhccCCcEEEEE
Confidence 76544322110 0011111 22334443 344578863332 43221 2346677788889876443
Q ss_pred Eec------CCCCccEEEEEEEec
Q 025211 197 VQR------STEEENLHIIKFWRD 214 (256)
Q Consensus 197 ~~~------~~~~~~~~l~~~~~~ 214 (256)
... .+...+++++-.+++
T Consensus 141 vlna~~yGvPQ~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 141 LLNANDYGVAQDRKRVFYIGFRKE 164 (331)
T ss_dssp EEEGGGTTCSBCCEEEEEEEEEGG
T ss_pred ecccccCCCCcccceEEEEEEcCC
Confidence 321 244577777766654
No 314
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.47 E-value=0.00057 Score=56.63 Aligned_cols=127 Identities=12% Similarity=0.075 Sum_probs=71.2
Q ss_pred CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211 16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV 95 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~ 95 (256)
+.|..|. .+=.+++.+... + +++.+|||+||++|.++..++.. ..-..|+|+|+-..-.+.- ..++..++
T Consensus 73 g~y~SR~--~~KL~ei~~~~~-l--~~~~~VlDLGaapGGwsq~~~~~----~gv~~V~avdvG~~~he~P-~~~~ql~w 142 (321)
T 3lkz_A 73 GHPVSRG--TAKLRWLVERRF-L--EPVGKVIDLGCGRGGWCYYMATQ----KRVQEVRGYTKGGPGHEEP-QLVQSYGW 142 (321)
T ss_dssp CCCSSTH--HHHHHHHHHTTS-C--CCCEEEEEETCTTCHHHHHHTTC----TTEEEEEEECCCSTTSCCC-CCCCBTTG
T ss_pred CCccchH--HHHHHHHHHhcC-C--CCCCEEEEeCCCCCcHHHHHHhh----cCCCEEEEEEcCCCCccCc-chhhhcCC
Confidence 3455542 333344444432 2 57789999999999997655544 2223699999876522100 00012233
Q ss_pred cc-eEEEc-chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEE
Q 025211 96 HA-DLINT-DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYL 171 (256)
Q Consensus 96 ~~-~~~~~-d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~ 171 (256)
+. .++.+ |+....+ ..+|+|+|+.- -.++.+. .+ ..-....|+.+.+.|++| |-+++
T Consensus 143 ~lV~~~~~~Dv~~l~~----~~~D~ivcDig-eSs~~~~-----ve---------~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 143 NIVTMKSGVDVFYRPS----ECCDTLLCDIG-ESSSSAE-----VE---------EHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp GGEEEECSCCTTSSCC----CCCSEEEECCC-CCCSCHH-----HH---------HHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cceEEEeccCHhhCCC----CCCCEEEEECc-cCCCChh-----hh---------hhHHHHHHHHHHHHhccCCCcEEE
Confidence 33 66666 7655422 57999999865 1111111 01 011234677778889988 76666
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.46 E-value=6e-05 Score=64.19 Aligned_cols=73 Identities=12% Similarity=0.060 Sum_probs=55.0
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
..|++.++... ..++..|||+.||+|..++++.++ +...+|+|+++..++.+++++...+.....++.|+
T Consensus 239 ~~l~~~~i~~~----~~~~~~VlDpF~GsGtt~~aa~~~------gr~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~ 308 (323)
T 1boo_A 239 AKLPEFFIRML----TEPDDLVVDIFGGSNTTGLVAERE------SRKWISFEMKPEYVAASAFRFLDNNISEEKITDIY 308 (323)
T ss_dssp THHHHHHHHHH----CCTTCEEEETTCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHH
T ss_pred HHHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHc------CCCEEEEeCCHHHHHHHHHHHHhcccchHHHHHHH
Confidence 44555555443 368999999999999998877665 34899999999999999998876655545555666
Q ss_pred hhc
Q 025211 105 ASG 107 (256)
Q Consensus 105 ~~~ 107 (256)
.+.
T Consensus 309 ~~i 311 (323)
T 1boo_A 309 NRI 311 (323)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 316
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.37 E-value=0.0011 Score=61.85 Aligned_cols=135 Identities=16% Similarity=0.244 Sum_probs=88.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcc--------cCCCceEEEEeC---CHHHHHHHHH-----------HHHHcC----
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQ--------EVPGVQYIATDI---NPYAVEVTRK-----------TLEAHN---- 94 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~--------~~~~~~v~giD~---~~~~i~~a~~-----------~~~~~~---- 94 (256)
++.-+|+|+|-|+|...+...+...+ ......++++|. +.+.+..+-. ......
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 34579999999999988877765421 112356999998 6666653321 122211
Q ss_pred -----------CcceEEEcchhhchhhhc---CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh
Q 025211 95 -----------VHADLINTDIASGLEKRL---AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD 160 (256)
Q Consensus 95 -----------~~~~~~~~d~~~~~~~~~---~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (256)
+..++..+|+.+.++... ...||+++.++ |.+..+++ .| ...++..+.
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~--------~w---------~~~~~~~l~ 206 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPD--------MW---------TQNLFNAMA 206 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGG--------GS---------CHHHHHHHH
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChh--------hh---------hHHHHHHHH
Confidence 111577788888776542 46799999976 32221111 12 367889999
Q ss_pred hccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211 161 KLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVV 197 (256)
Q Consensus 161 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 197 (256)
++++|||.+.. +.....+++.+.+.||......
T Consensus 207 ~~~~~g~~~~t----~~~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 207 RLARPGGTLAT----FTSAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp HHEEEEEEEEE----SCCCHHHHHHHHHHTCEEEEEE
T ss_pred HHhCCCCEEEe----ccCcHHHHHHHHhCCeEEEecc
Confidence 99999999875 3345688999999999866543
No 317
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.31 E-value=0.00052 Score=57.57 Aligned_cols=82 Identities=17% Similarity=0.172 Sum_probs=60.1
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCce-EEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhc--CCCcc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQ-YIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRL--AGLVD 117 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~-v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~fD 117 (256)
....+|+|+.||.|.+.+.+.+. +-... +.++|+++.+++..+.|.. ...++.+|+.+...... ...+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a----G~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL----GIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT----TBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCCCEEEEeCcCccHHHHHHHHC----CCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHccHHHhcccCCcC
Confidence 46679999999999988776664 33333 6999999999887777642 22578889887653221 24799
Q ss_pred EEEECCCCCCCCC
Q 025211 118 VMVVNPPYVPTPE 130 (256)
Q Consensus 118 ~Ii~npP~~~~~~ 130 (256)
+++..||....+.
T Consensus 86 ll~ggpPCQ~fS~ 98 (295)
T 2qrv_A 86 LVIGGSPCNDLSI 98 (295)
T ss_dssp EEEECCCCGGGBT
T ss_pred EEEecCCCccccc
Confidence 9999999876554
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.19 E-value=0.00093 Score=56.68 Aligned_cols=65 Identities=20% Similarity=0.233 Sum_probs=48.4
Q ss_pred cCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH---HHHHHHHHHHHHcC
Q 025211 20 PCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP---YAVEVTRKTLEAHN 94 (256)
Q Consensus 20 p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~---~~i~~a~~~~~~~~ 94 (256)
|..=...|++.++... ..++..|||+.||+|..++++.++ +...+|+|+++ ..++.+++++...+
T Consensus 224 ~~~kp~~l~~~~i~~~----~~~~~~vlDpF~GsGtt~~aa~~~------~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 224 PTQKPAAVIERLVRAL----SHPGSTVLDFFAGSGVTARVAIQE------GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp TTCCCHHHHHHHHHHH----SCTTCEEEETTCTTCHHHHHHHHH------TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCHHHHHHHHHHh----CCCCCEEEecCCCCCHHHHHHHHc------CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3333456667666654 368999999999999998887776 34899999999 99999999876443
No 319
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.96 E-value=0.0028 Score=54.67 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=63.6
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~ 115 (256)
+++.+||-+|+|. |..++.+++.+ ++ .|+++|.+++..+.+++. |.+ .++.. |+.+.......+.
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~-----Ga~~Vi~~~~~~~~~~~a~~l----Ga~-~vi~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVC-----GASIIIAVDIVESRLELAKQL----GAT-HVINSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHH-----TCSEEEEEESCHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEECCCHHHHHHHHHc----CCC-EEecCCccCHHHHHHHhcCCC
Confidence 5789999999875 66666666653 34 699999999988887643 433 22222 2222222222347
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-.-. ....+..+.+.|+++|+++++.
T Consensus 259 ~D~vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 259 VNFALESTG---------------------------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEEEECSC---------------------------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCC---------------------------CHHHHHHHHHHHhcCCEEEEeC
Confidence 999987422 1355778889999999998854
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.76 E-value=0.0038 Score=53.08 Aligned_cols=95 Identities=23% Similarity=0.258 Sum_probs=63.4
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCCc
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~f 116 (256)
+++.+||-.|+|. |..++.+++.+ +++|+++|.+++..+.+++ .|.+ .++. .|+.+.... ..+.+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~----lGa~-~~i~~~~~~~~~~~~~-~~g~~ 233 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAM-----GLRVAAVDIDDAKLNLARR----LGAE-VAVNARDTDPAAWLQK-EIGGA 233 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHH----TTCS-EEEETTTSCHHHHHHH-HHSSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-----CCeEEEEeCCHHHHHHHHH----cCCC-EEEeCCCcCHHHHHHH-hCCCC
Confidence 6889999999864 66666666652 5699999999998887754 3433 2222 122222222 12479
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+.+-. ....++.+.+.|+++|+++++.
T Consensus 234 d~vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 234 HGVLVTAV---------------------------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEEEESSC---------------------------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CEEEEeCC---------------------------CHHHHHHHHHHhccCCEEEEeC
Confidence 99987422 1456788888999999998853
No 321
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.71 E-value=0.012 Score=50.30 Aligned_cols=96 Identities=19% Similarity=0.223 Sum_probs=61.6
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc------chhhchhhhc
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT------DIASGLEKRL 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~------d~~~~~~~~~ 112 (256)
+++.+||-.|+|. |..++.+++.+ ++ +|+++|.+++..+.+++ .|.+ .++.. +..+......
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAM-----GAAQVVVTDLSATRLSKAKE----IGAD-LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEEESCHHHHHHHHH----TTCS-EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHHHHH----hCCC-EEEcCcccccchHHHHHHHHh
Confidence 5789999999764 55555555542 45 89999999988887754 3443 23322 2222222211
Q ss_pred CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
...+|+|+-.-. ....+..+.++|+++|+++++.
T Consensus 240 ~~g~D~vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTG---------------------------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSC---------------------------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC---------------------------ChHHHHHHHHHhcCCCEEEEEe
Confidence 256999987422 1345677888999999998854
No 322
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.65 E-value=0.076 Score=46.32 Aligned_cols=166 Identities=10% Similarity=-0.014 Sum_probs=91.2
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCc---eEEEEeCCHHHHHHHHHHHHHcCCc--c--------------------
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGV---QYIATDINPYAVEVTRKTLEAHNVH--A-------------------- 97 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~---~v~giD~~~~~i~~a~~~~~~~~~~--~-------------------- 97 (256)
..+|+|+.||.|.....+.+.... -++ .|.++|+++.+++.-+.|....... .
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~--~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~ 87 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARS--KNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEY 87 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHH--HTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHH
T ss_pred cceEEEEecCcCHHHHHHHHhCCc--cccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhcccccccccccc
Confidence 469999999999988777665210 011 2888999999999888876432100 0
Q ss_pred -----------eE---------EEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHH
Q 025211 98 -----------DL---------INTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILP 157 (256)
Q Consensus 98 -----------~~---------~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (256)
.+ ..+|+.+......++.+|+++..||-...+........... .+.++ ..+..+++
T Consensus 88 ~i~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~---~~~r~-~L~~~~~r 163 (403)
T 4dkj_A 88 GIKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQKGIDKE---LNTRS-GLLWEIER 163 (403)
T ss_dssp HHHHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCCCCCGG---GCCSG-GGHHHHHH
T ss_pred ccccccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCCCCCcc---ccccc-hhHHHHHH
Confidence 00 23666665443334568999999997665543211000000 00111 11233333
Q ss_pred HHhh-------ccccCeEEEEEEeCCCC------HHHHHHHHHHcCCcEEEEEec------CCCCccEEEEEEEec
Q 025211 158 SADK-------LLSKRGWLYLVTLTAND------PSQICLQMMEKGYAARIVVQR------STEEENLHIIKFWRD 214 (256)
Q Consensus 158 ~~~~-------~LkpgG~l~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~l~~~~~~ 214 (256)
-+.. .++|.-+++=..+.... ...+.+.+.+.||.+...... .+..++++++..+++
T Consensus 164 ii~~~~~k~~~~~~Pk~~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~~ 239 (403)
T 4dkj_A 164 ILEEIKNSFSKEEMPKYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRDD 239 (403)
T ss_dssp HHHHHHHHSCGGGSCSEEEEEEEGGGGSHHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEHH
T ss_pred HHHHhhhhhccccCCCEEEEecchhhhhhccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcCC
Confidence 3332 26775433322222222 236677788889876443321 234577777776655
No 323
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.61 E-value=0.0061 Score=52.59 Aligned_cols=96 Identities=15% Similarity=0.232 Sum_probs=62.5
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEE---Ecchhhchhh---hc
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLI---NTDIASGLEK---RL 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~---~~d~~~~~~~---~~ 112 (256)
+++.+||=.|+|. |..++.+++.+ ++ .|+++|.+++..+.+++ .|.+ .++ ..|+.+.... ..
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLA-----GATTVILSTRQATKRRLAEE----VGAT-ATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEECSCHHHHHHHHH----HTCS-EEECTTSSCHHHHHHSTTSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHHHHH----cCCC-EEECCCCcCHHHHHHhhhhcc
Confidence 5789999998753 55555555542 44 89999999998887765 3433 222 2233333222 22
Q ss_pred CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+.+|+|+-.-. ....+..+.++|+++|+++++.
T Consensus 251 ~gg~Dvvid~~G---------------------------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 251 PGGVDVVIECAG---------------------------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TTCEEEEEECSC---------------------------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEECCC---------------------------CHHHHHHHHHHhccCCEEEEEe
Confidence 347999987421 1356788888999999999854
No 324
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.58 E-value=0.031 Score=48.28 Aligned_cols=114 Identities=11% Similarity=0.042 Sum_probs=79.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
.+.+||.++.+.|.++..++.. .++.+.-|--....++.|+..|++.. .+...+..+. ....+|+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--------~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--------KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD----YPQQPGVVL 105 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--------CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTSC----CCSSCSEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC--------CceEEEhHHHHHHHHHHHHHHcCCCccceEecccccc----cccCCCEEE
Confidence 4578999999999987655432 34555446666678889999999875 3444443332 246899999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHc
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEK 189 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 189 (256)
...|- ....+...+..+...|++|+.+++..........+.+.+.+.
T Consensus 106 ~~lpk----------------------~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~ 152 (375)
T 4dcm_A 106 IKVPK----------------------TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 152 (375)
T ss_dssp EECCS----------------------CHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHH
T ss_pred EEcCC----------------------CHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhh
Confidence 86651 234467778899999999999988766554455666677665
No 325
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.54 E-value=0.0083 Score=52.59 Aligned_cols=49 Identities=8% Similarity=0.051 Sum_probs=41.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHH
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEA 92 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~ 92 (256)
.++..|+|+|++.|..++.++... .+ .++|+++|.+|..++.+++|+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~---~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVT---KGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHH---TSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHh---cCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 578999999999999998877322 33 36999999999999999999988
No 326
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.41 E-value=0.16 Score=49.34 Aligned_cols=159 Identities=12% Similarity=0.039 Sum_probs=88.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh-----------
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE----------- 109 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~----------- 109 (256)
....+++|+.||.|.+++.+.+. +-.-.+.++|+++.+++.-+.|.. ...++.+|+.+...
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~A----G~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQA----GISDTLWAIEMWDPAAQAFRLNNP----GSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHH----TSEEEEEEECSSHHHHHHHHHHCT----TSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCCCeEEEeccCccHHHHHHHHC----CCCceEEEEECCHHHHHHHHHhCC----CCccccccHHHHhhhccchhhhhhh
Confidence 45579999999999988777665 211158899999999887776642 23566677654310
Q ss_pred --hh-cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------CHH
Q 025211 110 --KR-LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------DPS 180 (256)
Q Consensus 110 --~~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~ 180 (256)
.. ..+.+|+|+..||--..+....... ....+ ..+ ..+..+++ +.+.++|.-+++=..++.. ...
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~---~~~~d-~R~-~L~~~~~r-iv~~~rPk~~llENV~glls~~~~~~~~ 683 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNS---RTYSK-FKN-SLVVSFLS-YCDYYRPRFFLLENVRNFVSFKRSMVLK 683 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCH---HHHHH-HTT-SHHHHHHH-HHHHHCCSEEEEEEEGGGGTTGGGHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCC---Ccccc-hhh-HHHHHHHH-HHHHhCCCEEEEeccHHHhccCcchHHH
Confidence 01 1246999999999776654321100 00000 000 11233333 3345677644432222221 123
Q ss_pred HHHHHHHHcCCcEEEEEec------CCCCccEEEEEEEe
Q 025211 181 QICLQMMEKGYAARIVVQR------STEEENLHIIKFWR 213 (256)
Q Consensus 181 ~~~~~~~~~g~~~~~~~~~------~~~~~~~~l~~~~~ 213 (256)
.+...|.+.||.+...... .+...+++++-.++
T Consensus 684 ~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r~ 722 (1002)
T 3swr_A 684 LTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 722 (1002)
T ss_dssp HHHHHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEECT
T ss_pred HHHHHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEEeC
Confidence 5677778889886543321 23456666665544
No 327
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.39 E-value=0.016 Score=49.25 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=60.5
Q ss_pred CCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch-hhchhhhc-CCCccE
Q 025211 42 HPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI-ASGLEKRL-AGLVDV 118 (256)
Q Consensus 42 ~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~-~~~fD~ 118 (256)
++.+||-+|+|. |..++.+++.+ +|+++|+++|.+++..+.+++ .|.+ .++..+- .+...... ...+|+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~---~~Ga~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~~g~g~D~ 241 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKAL---MKNITIVGISRSKKHRDFALE----LGAD-YVSEMKDAESLINKLTDGLGASI 241 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHH---CTTCEEEEECSCHHHHHHHHH----HTCS-EEECHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHh---cCCCEEEEEeCCHHHHHHHHH----hCCC-EEeccccchHHHHHhhcCCCccE
Confidence 689999999853 44544444442 346789999999998887765 3432 2222111 11111211 237999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+-.-. ....+..+.+.|+++|+++++.
T Consensus 242 vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 242 AIDLVG---------------------------TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEESSC---------------------------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC---------------------------ChHHHHHHHHHhhcCCEEEEeC
Confidence 987422 1345777888999999998754
No 328
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.36 E-value=0.04 Score=49.20 Aligned_cols=164 Identities=15% Similarity=0.142 Sum_probs=87.7
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhh------------
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEK------------ 110 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~------------ 110 (256)
.-+++|+.||.|.+.+.+.+. +.. .+.++|+++.+++.-+.|.... ....++.+|+.+....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a----G~~-~v~avE~d~~A~~ty~~N~~~~-p~~~~~~~DI~~i~~~~~~~~~~~~~~~ 161 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI----GGQ-CVFTSEWNKHAVRTYKANHYCD-PATHHFNEDIRDITLSHQEGVSDEAAAE 161 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT----TEE-EEEEECCCHHHHHHHHHHSCCC-TTTCEEESCTHHHHCTTCTTSCHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC----CCE-EEEEEeCCHHHHHHHHHhcccC-CCcceeccchhhhhhccccccchhhHHh
Confidence 479999999999987666543 211 4899999999988777764211 1226778888776421
Q ss_pred ---hcCCCccEEEECCCCCCCCCcccccccc---hhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------C
Q 025211 111 ---RLAGLVDVMVVNPPYVPTPEDEVGREGI---ASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------D 178 (256)
Q Consensus 111 ---~~~~~fD~Ii~npP~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~ 178 (256)
.....+|+|+..||.-..+......... ...+.++..+ ..+..+++-+ +.++|.-+++=..+... .
T Consensus 162 ~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~-~Lf~e~~riI-~~~rPk~fvlENV~gl~s~~~g~~ 239 (482)
T 3me5_A 162 HIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQG-TLFFDVVRII-DARRPAMFVLENVKNLKSHDKGKT 239 (482)
T ss_dssp HHHHHSCCCSEEEEECCCCCC------------------CTTTT-SHHHHHHHHH-HHHCCSEEEEEEETTTTTGGGGHH
T ss_pred hhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccc-cHHHHHHHHH-HHcCCcEEEEeCcHHHhcccCCcH
Confidence 0124689999999977665432111000 0011111111 1233344333 34677533332222221 1
Q ss_pred HHHHHHHHHHcCCcEE-----------EEEe---cCCCCccEEEEEEEec
Q 025211 179 PSQICLQMMEKGYAAR-----------IVVQ---RSTEEENLHIIKFWRD 214 (256)
Q Consensus 179 ~~~~~~~~~~~g~~~~-----------~~~~---~~~~~~~~~l~~~~~~ 214 (256)
...+.+.|.+.||.+. .+.. ..+..++++++-.+++
T Consensus 240 f~~i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~vPQ~R~R~fivg~r~~ 289 (482)
T 3me5_A 240 FRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRD 289 (482)
T ss_dssp HHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGTSSBCCEEEEEEEEEGG
T ss_pred HHHHHHHHhcCCcEEEeccccCcccceeeeccccCCccceEEEEEEEecC
Confidence 2356777788887653 1111 2345677777766654
No 329
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.30 E-value=0.0053 Score=53.46 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=62.5
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---ch-hhchhhhcCC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT---DI-ASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~-~~~~~~~~~~ 114 (256)
+++.+||-+|+|. |..++.+++.+ ++ +|+++|.+++.++.+++ .|. +++.. |. .+.......+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~a~~----lGa--~~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLL-----GAACVIVGDQNPERLKLLSD----AGF--ETIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH-----TCSEEEEEESCHHHHHHHHT----TTC--EEEETTSSSCHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEEcCCHHHHHHHHH----cCC--cEEcCCCcchHHHHHHHHhCC
Confidence 5789999999865 66666666653 35 89999999998887653 344 23321 22 2222222223
Q ss_pred -CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 -LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 -~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+|+-.-.-...... ....+ .. ....+..+.++|+++|+++++.
T Consensus 253 ~g~Dvvid~~g~~~~~~~------~~~~~---~~----~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 253 PEVDCGVDAVGFEAHGLG------DEANT---ET----PNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp SCEEEEEECSCTTCBCSG------GGTTS---BC----TTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCEEEECCCCcccccc------ccccc---cc----cHHHHHHHHHHHhcCCEEEEec
Confidence 69999874221000000 00000 00 0135777888999999998754
No 330
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.28 E-value=0.01 Score=46.13 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=56.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~~f 116 (256)
+++++||..|++. .++..+++.+... +++|+++|.+++..+.+++ .+.. .+.. .+..+...... ...+
T Consensus 37 ~~g~~vlV~Ga~g-giG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATG-GVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVE-YVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCS-EEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCC-hHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC-EEeeCCcHHHHHHHHHHhCCCCC
Confidence 5789999998532 2333344433322 4689999999887766543 3432 2221 12212211111 2469
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 109 D~vi~~~g----------------------------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA----------------------------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC----------------------------THHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc----------------------------hHHHHHHHHHhccCCEEEEEc
Confidence 99987521 134677788999999998853
No 331
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.28 E-value=0.016 Score=49.40 Aligned_cols=96 Identities=20% Similarity=0.238 Sum_probs=60.6
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE----cchhhchhhhc---
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN----TDIASGLEKRL--- 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~----~d~~~~~~~~~--- 112 (256)
+++.+||-.|+|. |..++.+++. .++.|+++|.+++..+.+++ .|.+ .++. .+..+......
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~-----~Ga~Vi~~~~~~~~~~~~~~----lGa~-~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKA-----YGAFVVCTARSPRRLEVAKN----CGAD-VTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHH----TTCS-EEEECCTTTSCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHH----hCCC-EEEcCcccccHHHHHHHHhccc
Confidence 5789999999753 4454444443 25679999999998887753 3443 2222 12222222211
Q ss_pred -CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 -AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 -~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
...+|+|+-+-. ....+..+.+.|+++|+++++.
T Consensus 237 ~g~g~D~vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTIDCSG---------------------------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEEECSC---------------------------CHHHHHHHHHHSCTTCEEEECS
T ss_pred cCCCCCEEEECCC---------------------------CHHHHHHHHHHHhcCCEEEEEe
Confidence 246999987532 1345777888999999998854
No 332
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.26 E-value=0.015 Score=49.52 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=63.4
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc--chhhchhhhc-CCCc
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT--DIASGLEKRL-AGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~--d~~~~~~~~~-~~~f 116 (256)
+++.+||=.|+|. |..++.+++.+ .+++|+++|.+++..+.+++ .|.+. ++.. +..+...... ...+
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~----g~~~Vi~~~~~~~~~~~~~~----lGa~~-~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAV----SAARVIAVDLDDDRLALARE----VGADA-AVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH----CCCEEEEEESCHHHHHHHHH----TTCSE-EEECSTTHHHHHHHHHGGGCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc----CCCEEEEEcCCHHHHHHHHH----cCCCE-EEcCCCcHHHHHHHHhCCCCC
Confidence 5789999999864 56666666553 25699999999998887764 34432 2221 2222222221 2379
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+-.-. -...+..+.+.|+++|+++++.
T Consensus 241 d~v~d~~G---------------------------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVG---------------------------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSC---------------------------CHHHHHHHHHHEEEEEEEEECS
T ss_pred eEEEECCC---------------------------CHHHHHHHHHHHhcCCEEEEEC
Confidence 99987422 1346788889999999999854
No 333
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.25 E-value=0.016 Score=49.06 Aligned_cols=97 Identities=9% Similarity=0.060 Sum_probs=58.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE----cchhhchhhhcCCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN----TDIASGLEKRLAGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~----~d~~~~~~~~~~~~f 116 (256)
+++++||-.|++. .++..+++.+.. .+++|+++|.+++..+.+++ .+.. .++. .++.+.......+.+
T Consensus 144 ~~g~~vlV~Ga~g-giG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAG-AVGSVVGQIAKL--KGCKVVGAAGSDEKIAYLKQ----IGFD-AAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTB-HHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH----TTCS-EEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCC-cHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHh----cCCc-EEEecCCHHHHHHHHHHHhCCCC
Confidence 5789999999732 233334443332 35699999999988777632 2332 1211 122222222223579
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 216 d~vi~~~g----------------------------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG----------------------------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC----------------------------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC----------------------------hHHHHHHHHHHhcCCEEEEEe
Confidence 99988621 134677788999999998754
No 334
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.15 E-value=0.0078 Score=51.44 Aligned_cols=96 Identities=19% Similarity=0.147 Sum_probs=60.3
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcC-C
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLA-G 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~-~ 114 (256)
+++.+||=.|+|. |..++.+++. .++ .|+++|.+++..+.+++. |.+ .++. .|+.+....... .
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~-----~Ga~~Vi~~~~~~~~~~~~~~l----Ga~-~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANH-----LGAGRIFAVGSRKHCCDIALEY----GAT-DIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHT-----TTCSSEEEECCCHHHHHHHHHH----TCC-EEECGGGSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCcEEEEECCCHHHHHHHHHh----CCc-eEEcCCCcCHHHHHHHHcCCC
Confidence 5789999998753 4444444443 245 799999999988877653 433 2222 233333322222 3
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+|+-.-. -...+..+.+.|+++|+++++.
T Consensus 235 g~D~v~d~~g---------------------------~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 235 GVDKVVIAGG---------------------------DVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp CEEEEEECSS---------------------------CTTHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC---------------------------ChHHHHHHHHHHhcCCEEEEec
Confidence 6999987321 1244777888999999999754
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.11 E-value=0.026 Score=48.51 Aligned_cols=96 Identities=25% Similarity=0.256 Sum_probs=60.9
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-----chhhchhhhcC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT-----DIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-----d~~~~~~~~~~ 113 (256)
+++.+||-.|+|. |..++.+++. .++ .|+++|.+++..+.+++ .|.+ .++.. ++.+.......
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~-----~Ga~~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHS-----AGAKRIIAVDLNPDKFEKAKV----FGAT-DFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEECSCGGGHHHHHH----TTCC-EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCCEEEEEcCCHHHHHHHHH----hCCc-eEEeccccchhHHHHHHHHhC
Confidence 5789999999753 4454445444 245 79999999988887754 3433 22211 22222222223
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 173 (256)
+.+|+|+-.-. ....+..+.++|+++ |+++++.
T Consensus 261 ~g~D~vid~~g---------------------------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLECVG---------------------------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEECSC---------------------------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC---------------------------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 47999987422 134577888899999 9998754
No 336
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.08 E-value=0.03 Score=48.10 Aligned_cols=96 Identities=15% Similarity=0.093 Sum_probs=61.6
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-----chhhchhhhcC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT-----DIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-----d~~~~~~~~~~ 113 (256)
+++.+||-+|+|. |..++.+++.+ ++ +|+++|.+++..+.+++ .|.+ .++.. ++.+.......
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAA-----GASRIIGVGTHKDKFPKAIE----LGAT-ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH-----TCSEEEEECSCGGGHHHHHH----TTCS-EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEECCCHHHHHHHHH----cCCc-EEEecccccchHHHHHHHHhC
Confidence 5789999999753 45555555543 44 79999999988887754 3443 22221 23222222223
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 173 (256)
+.+|+|+-.-. ....+..+.++|+++ |+++++.
T Consensus 260 gg~Dvvid~~g---------------------------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAG---------------------------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSC---------------------------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCC---------------------------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 47999987421 135577888899999 9998754
No 337
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.03 E-value=0.08 Score=43.20 Aligned_cols=108 Identities=13% Similarity=0.147 Sum_probs=69.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHh---cccCCCceEEEEe-----CCHH-------------------HHHHHHHHH---
Q 025211 41 HHPVLCMEVGCGSGYVITSLALML---GQEVPGVQYIATD-----INPY-------------------AVEVTRKTL--- 90 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l---~~~~~~~~v~giD-----~~~~-------------------~i~~a~~~~--- 90 (256)
.-++.|+|.||-.|.-++.++.+. ....++.+|+++| ..+. ..+..++.+
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 356799999999999877766542 2223556899999 2210 011122211
Q ss_pred ---HHcCC---cceEEEcchhhchhhh----cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh
Q 025211 91 ---EAHNV---HADLINTDIASGLEKR----LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD 160 (256)
Q Consensus 91 ---~~~~~---~~~~~~~d~~~~~~~~----~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (256)
...+. +.+++.+++.+.++.+ ...+||++..+.-. -......++.+.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-----------------------Y~~t~~~le~~~ 204 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-----------------------YEPTKAVLEAIR 204 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-----------------------HHHHHHHHHHHG
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-----------------------cchHHHHHHHHH
Confidence 12232 2399999999887653 23579999886311 122456788899
Q ss_pred hccccCeEEEE
Q 025211 161 KLLSKRGWLYL 171 (256)
Q Consensus 161 ~~LkpgG~l~~ 171 (256)
..|+|||++++
T Consensus 205 p~l~~GGvIv~ 215 (257)
T 3tos_A 205 PYLTKGSIVAF 215 (257)
T ss_dssp GGEEEEEEEEE
T ss_pred HHhCCCcEEEE
Confidence 99999999998
No 338
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.014 Score=49.75 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE----cchhhchhhhcCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN----TDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~----~d~~~~~~~~~~~ 114 (256)
+++++||-.|+ |.|...+.+++. .+++|+++|.+++..+.+++ .+.. .++. .++.+.......+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga~V~~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKA-----MGYRVLGIDGGEGKEELFRS----IGGE-VFIDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECSTTHHHHHHH----TTCC-EEEETTTCSCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCcEEEEcCCHHHHHHHHH----cCCc-eEEecCccHhHHHHHHHHhCC
Confidence 57899999997 344444444433 25699999998887766654 3432 2221 1222222222223
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+++.+-. ....++.+.+.|+++|+++.+.
T Consensus 238 ~~D~vi~~~g---------------------------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 238 GAHGVINVSV---------------------------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp CEEEEEECSS---------------------------CHHHHHHHTTSEEEEEEEEECC
T ss_pred CCCEEEECCC---------------------------cHHHHHHHHHHHhcCCEEEEEe
Confidence 7999988532 1356788889999999998754
No 339
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.99 E-value=0.019 Score=48.58 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=60.9
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 115 (256)
+++++||-.|+ |.|...+.+++. .+++|++++.+++..+.+.+ ..+.. .++. .++.+.......+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~---~~g~~-~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARL-----KGCRVVGIAGGAEKCRFLVE---ELGFD-GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH---TTCCS-EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHH---HcCCC-EEEECCCHHHHHHHHHhcCCC
Confidence 57899999998 345555444443 35699999999988777632 23432 2222 22222222222357
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 219 ~d~vi~~~g----------------------------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 219 IDVFFDNVG----------------------------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEEEESSC----------------------------HHHHHHHHTTEEEEEEEEECC
T ss_pred ceEEEECCC----------------------------cchHHHHHHHHhhCCEEEEEe
Confidence 999987521 135778888999999999854
No 340
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.94 E-value=0.024 Score=48.14 Aligned_cols=95 Identities=23% Similarity=0.254 Sum_probs=60.0
Q ss_pred CCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCCc
Q 025211 41 HHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~f 116 (256)
+++.+||-.|+| .|...+.+++. .+++|+++|.+++..+.+++ .+.+ .++. .|+.+...... +.+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~----lGa~-~~~d~~~~~~~~~~~~~~-~~~ 231 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKA-----MGLNVVAVDIGDEKLELAKE----LGAD-LVVNPLKEDAAKFMKEKV-GGV 231 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHH----TTCS-EEECTTTSCHHHHHHHHH-SSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHH----CCCC-EEecCCCccHHHHHHHHh-CCC
Confidence 578999999985 24444444443 25699999999998887753 3432 2221 12222222212 479
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+.+-. ....++.+.++|+++|+++++.
T Consensus 232 d~vid~~g---------------------------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 232 HAAVVTAV---------------------------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEEEESSC---------------------------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC---------------------------CHHHHHHHHHHhhcCCEEEEec
Confidence 99987522 1245777888999999998754
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.92 E-value=0.038 Score=47.47 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=60.5
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-----chhhchhhhcC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT-----DIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-----d~~~~~~~~~~ 113 (256)
+++.+||-.|+|. |..++.+++. .++ .|+++|.+++..+.+++ .|.+ .++.. ++.+.......
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~-----~Ga~~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKA-----AGAARIIGVDINKDKFAKAKE----VGAT-ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEECSCGGGHHHHHH----TTCS-EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCCeEEEEcCCHHHHHHHHH----hCCc-eEecccccchhHHHHHHHHhC
Confidence 5789999999753 4444444444 245 79999999988887753 3433 22221 22222222223
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 173 (256)
+.+|+|+-.-. ....+..+.+.|+++ |+++++.
T Consensus 260 ~g~D~vid~~g---------------------------~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVIG---------------------------RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECSC---------------------------CHHHHHHHHHHBCTTTCEEEECS
T ss_pred CCCcEEEECCC---------------------------CHHHHHHHHHHhhcCCcEEEEec
Confidence 47999987421 134577888899999 9998754
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.92 E-value=0.22 Score=36.18 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=69.4
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMV 120 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii 120 (256)
..+|+=+|| |.++..+++.|.+. +..|+++|.+++.++.+++ .+ ..++.+|..+.. ....-..+|+++
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~----~g--~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE----RG--VRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH----TT--CEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECc--CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH----cC--CCEEECCCCCHHHHHhcCcccCCEEE
Confidence 457777776 56666677777643 5689999999998887654 22 367888876542 121124789998
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAAR 194 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (256)
+..|- +.....+-...+.+.|+..++.... .....+.+.+.|....
T Consensus 77 ~~~~~------------------------~~~n~~~~~~a~~~~~~~~iiar~~----~~~~~~~l~~~G~d~v 122 (140)
T 3fwz_A 77 LTIPN------------------------GYEAGEIVASARAKNPDIEIIARAH----YDDEVAYITERGANQV 122 (140)
T ss_dssp ECCSC------------------------HHHHHHHHHHHHHHCSSSEEEEEES----SHHHHHHHHHTTCSEE
T ss_pred EECCC------------------------hHHHHHHHHHHHHHCCCCeEEEEEC----CHHHHHHHHHCCCCEE
Confidence 75331 0112223334556778887665332 2344567777776543
No 343
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.91 E-value=0.019 Score=49.16 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=61.6
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCce-EEEEeCCHHHHHHHHHHHHHcCCcceEE-----Ecchhhchhhhc-
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQ-YIATDINPYAVEVTRKTLEAHNVHADLI-----NTDIASGLEKRL- 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~-v~giD~~~~~i~~a~~~~~~~~~~~~~~-----~~d~~~~~~~~~- 112 (256)
+++.+||=.|+|. |..++.+++.+ ++. |+++|.+++..+.+++. ...-+ ... ..|+.+......
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~~Vi~~~~~~~~~~~a~~l-~~~~~--~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAA-----GACPLVITDIDEGRLKFAKEI-CPEVV--THKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHT-----TCCSEEEEESCHHHHHHHHHH-CTTCE--EEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCEEEEECCCHHHHHHHHHh-chhcc--cccccccchHHHHHHHHHHhC
Confidence 5788999998753 55555555542 455 99999999999988764 21100 111 123333222222
Q ss_pred CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
...+|+|+-.-. -...+..+.++|+++|+++++.
T Consensus 250 g~g~Dvvid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG---------------------------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC---------------------------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC---------------------------ChHHHHHHHHHhcCCCEEEEEc
Confidence 347999987421 1345778888999999999864
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.89 E-value=0.015 Score=50.07 Aligned_cols=96 Identities=22% Similarity=0.213 Sum_probs=61.1
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-----chhhchhhhcC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT-----DIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-----d~~~~~~~~~~ 113 (256)
+++.+||-.|+|. |..++.+++.+ ++ .|+++|.+++..+.+++ .|.+ .++.. ++.+.......
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~-----Ga~~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVA-----GASRIIGVDINKDKFARAKE----FGAT-ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH-----TCSEEEEECSCGGGHHHHHH----HTCS-EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEEcCCHHHHHHHHH----cCCc-eEeccccccccHHHHHHHHhC
Confidence 5789999999753 44555555442 45 79999999988887764 3433 22211 22222222223
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 173 (256)
+.+|+|+-.-. ....+..+.+.|+++ |+++++.
T Consensus 259 ~g~D~vid~~g---------------------------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 259 GGVDYSFECIG---------------------------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SCBSEEEECSC---------------------------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC---------------------------cHHHHHHHHHhhccCCcEEEEEe
Confidence 47999987421 134577888899999 9998754
No 345
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.89 E-value=0.017 Score=49.13 Aligned_cols=99 Identities=23% Similarity=0.266 Sum_probs=60.3
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhcC-CCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRLA-GLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~~-~~f 116 (256)
+++++||-.|+|+| ++..+++.+... .+++|+++|.+++..+.+++ .+.+ .++.. +..+....... +.+
T Consensus 169 ~~g~~vlV~Gagg~-iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 169 DPTKTLLVVGAGGG-LGTMAVQIAKAV-SGATIIGVDVREEAVEAAKR----AGAD-YVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCcc-HHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----hCCC-EEecCCCccHHHHHHHHhcCCCc
Confidence 57899999998633 233333333321 25689999999988887754 2332 22211 11111222222 479
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+++.+-. ....+..+.+.|+++|+++++.
T Consensus 242 d~vi~~~g---------------------------~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 242 DAVIDLNN---------------------------SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEESCC---------------------------CHHHHTTGGGGEEEEEEEEECC
T ss_pred eEEEECCC---------------------------CHHHHHHHHHHHhcCCEEEEEC
Confidence 99988522 1345778889999999998854
No 346
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.85 E-value=0.021 Score=49.21 Aligned_cols=96 Identities=21% Similarity=0.196 Sum_probs=62.4
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE-----cchhhchhhhcC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN-----TDIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 113 (256)
+++.+||=+|+|. |..++.+++.+ ++ +|+++|.+++.++.+++ .|.+ .++. .++.+.......
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~-----Ga~~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTA-----GASRIIGIDIDSKKYETAKK----FGVN-EFVNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHH-----TCSCEEEECSCTTHHHHHHT----TTCC-EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-----CCCeEEEEcCCHHHHHHHHH----cCCc-EEEccccCchhHHHHHHHhcC
Confidence 5788999998853 55555555543 34 79999999988887653 3433 2221 223333333334
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 173 (256)
+.+|+|+-.-. ....+..+.+.|++| |+++++.
T Consensus 262 gg~D~vid~~g---------------------------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 262 GGVDYSFECIG---------------------------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SCBSEEEECSC---------------------------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC---------------------------CHHHHHHHHHHhhccCCEEEEEc
Confidence 58999987421 135678888899997 9998854
No 347
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.84 E-value=0.039 Score=47.31 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=59.5
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhc-CCC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRL-AGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~-~~~ 115 (256)
+++.+||=.|+|. |..++.+++. .+++|+++|.+++..+.+++ .|.+ .++.. |+.+...... ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~-----~Ga~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKA-----TGAEVIVTSSSREKLDRAFA----LGAD-HGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCEEEEEecCchhHHHHHH----cCCC-EEEcCCcccHHHHHHHHhCCCC
Confidence 5789999999653 4444444443 35699999999988887754 3443 23322 2222222222 237
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-+-. ...+..+.+.|+++|+++++.
T Consensus 258 ~D~vid~~g----------------------------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 258 ADHILEIAG----------------------------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEEEETT----------------------------SSCHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEECCC----------------------------hHHHHHHHHHhhcCCEEEEEe
Confidence 999987421 012566778999999999864
No 348
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.83 E-value=0.02 Score=49.24 Aligned_cols=95 Identities=19% Similarity=0.176 Sum_probs=58.8
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEE
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVM 119 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~I 119 (256)
+++.+||-+|+|. |..++.+++. .+++|+++|.+++..+.+++ .|.+ .++..+-.+..... ...+|+|
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~~-~~g~Dvv 261 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHA-----MGAHVVAFTTSEAKREAAKA----LGAD-EVVNSRNADEMAAH-LKSFDFI 261 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHH----HTCS-EEEETTCHHHHHTT-TTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHH----cCCc-EEeccccHHHHHHh-hcCCCEE
Confidence 5789999999863 4555555544 25689999999988887764 3433 23222111111111 2579999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+..-.- ...+..+.+.|+++|+++.+.
T Consensus 262 id~~g~---------------------------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 262 LNTVAA---------------------------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EECCSS---------------------------CCCHHHHHTTEEEEEEEEECC
T ss_pred EECCCC---------------------------HHHHHHHHHHhccCCEEEEec
Confidence 874210 112566778999999988754
No 349
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.82 E-value=0.43 Score=45.16 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=35.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHH
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTL 90 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~ 90 (256)
++..+|+|+.||.|.++.-+.+......... .+.++|+++.+++.-+.|.
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3457899999999998877766532111111 5789999999998877764
No 350
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.80 E-value=0.044 Score=47.15 Aligned_cols=96 Identities=21% Similarity=0.183 Sum_probs=60.7
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE-----cchhhchhhhcC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN-----TDIASGLEKRLA 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 113 (256)
+++.+||-+|+|. |..++.+++. -++ +|+++|.+++..+.+++ .|.+ .++. .++.+.......
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga~~Vi~~~~~~~~~~~a~~----lGa~-~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKI-----AGASRIIAIDINGEKFPKAKA----LGAT-DCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEECSCGGGHHHHHH----TTCS-EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCCeEEEEcCCHHHHHHHHH----hCCc-EEEccccccchHHHHHHHHhC
Confidence 5789999999752 4454444444 245 79999999988887754 3433 2221 122222222223
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 173 (256)
+.+|+|+-.-. ....+..+.++|+++ |+++++.
T Consensus 264 ~g~Dvvid~~G---------------------------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 264 GGVDYSLDCAG---------------------------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SCBSEEEESSC---------------------------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCccEEEECCC---------------------------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 47999987421 135577888899999 9998754
No 351
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.80 E-value=0.03 Score=48.04 Aligned_cols=95 Identities=20% Similarity=0.267 Sum_probs=62.3
Q ss_pred CCCEEEEec-cc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE--cchhhchhhhcCCCcc
Q 025211 42 HPVLCMEVG-CG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN--TDIASGLEKRLAGLVD 117 (256)
Q Consensus 42 ~~~~VLDlG-cG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~fD 117 (256)
++.+||=.| +| .|..++.+++.+ .+++|+++|.+++..+.+++ .|.+ .++. .++.+.......+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~----~g~~Vi~~~~~~~~~~~~~~----lGad-~vi~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR----TDLTVIATASRPETQEWVKS----LGAH-HVIDHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH----CCSEEEEECSSHHHHHHHHH----TTCS-EEECTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh----cCCEEEEEeCCHHHHHHHHH----cCCC-EEEeCCCCHHHHHHHhcCCCce
Confidence 678899887 43 466766666652 35699999999988887754 3433 2221 1222222222235799
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
+|+-+-. -...+..+.++|+++|+++++
T Consensus 242 vvid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTH---------------------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSC---------------------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCC---------------------------chhhHHHHHHHhcCCCEEEEE
Confidence 9987421 245678888999999999985
No 352
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.74 E-value=0.018 Score=48.87 Aligned_cols=95 Identities=14% Similarity=0.096 Sum_probs=59.4
Q ss_pred CCCCEEEEeccc--ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CC
Q 025211 41 HHPVLCMEVGCG--SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGcG--~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~ 114 (256)
+++.+||-.|+| .|..++.+++.. +++|+++|.+++..+.+++ .+.+ .++. .|+.+...... ..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~----lga~-~~~~~~~~~~~~~~~~~~~~~ 212 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL-----NFRLIAVTRNNKHTEELLR----LGAA-YVIDTSTAPLYETVMELTNGI 212 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEESSSTTHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHh----CCCc-EEEeCCcccHHHHHHHHhCCC
Confidence 578999999987 455655555542 5699999999988887765 2433 2222 22222222222 24
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+|+.+-. ... .....+.|+++|+++++.
T Consensus 213 g~Dvvid~~g---------------------------~~~-~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 213 GADAAIDSIG---------------------------GPD-GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp CEEEEEESSC---------------------------HHH-HHHHHHTEEEEEEEEECC
T ss_pred CCcEEEECCC---------------------------Chh-HHHHHHHhcCCCEEEEEe
Confidence 7999987521 112 233347899999999864
No 353
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.73 E-value=0.027 Score=47.76 Aligned_cols=96 Identities=16% Similarity=0.224 Sum_probs=59.9
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE----cchhhchhhhcCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN----TDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~----~d~~~~~~~~~~~ 114 (256)
+++++||-.|+ |.|...+.+++. .+++|+++|.+++..+.+++. .|.. .++. .++.+.......+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~-----~G~~V~~~~~~~~~~~~~~~~---~g~~-~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKM-----MGCYVVGSAGSKEKVDLLKTK---FGFD-DAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHT---SCCS-EEEETTSCSCSHHHHHHHCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHH---cCCc-eEEecCCHHHHHHHHHHHhCC
Confidence 57899999997 345554444443 256999999999887776532 2332 2221 1222222222235
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 225 ~~d~vi~~~g----------------------------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 225 GIDIYFENVG----------------------------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CEEEEEESSC----------------------------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCcEEEECCC----------------------------HHHHHHHHHHHhcCCEEEEEc
Confidence 6999988521 135778888999999998753
No 354
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.68 E-value=0.052 Score=46.15 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=59.2
Q ss_pred CCCEEEEec-cc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE--cchhhchhhhcCCCcc
Q 025211 42 HPVLCMEVG-CG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN--TDIASGLEKRLAGLVD 117 (256)
Q Consensus 42 ~~~~VLDlG-cG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~fD 117 (256)
++.+||=.| +| .|..++.+++. .+++|++++.+++..+.+++ .|.+ .++. .++.+.........+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~-----~Ga~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA-----YGLRVITTASRNETIEWTKK----MGAD-IVLNHKESLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEECCSHHHHHHHHH----HTCS-EEECTTSCHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHh----cCCc-EEEECCccHHHHHHHhCCCCcc
Confidence 688999884 33 34454444443 35699999999998888775 2433 2221 1222222233335799
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
+|+.+-. -...+..+.++|+++|+++.+
T Consensus 220 vv~d~~g---------------------------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN---------------------------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC---------------------------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC---------------------------chHHHHHHHHHhccCCEEEEE
Confidence 9987421 245678888899999999764
No 355
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.65 E-value=0.019 Score=48.91 Aligned_cols=91 Identities=21% Similarity=0.141 Sum_probs=59.6
Q ss_pred cCCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccE
Q 025211 40 EHHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 40 ~~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.+++.+||-.|+|. |..++.+++. .+++|+++|.+++..+.+++ .|.+ .++ .+... ....+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~-----~Ga~Vi~~~~~~~~~~~~~~----lGa~-~v~-~~~~~-----~~~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVA-----MGAEVSVFARNEHKKQDALS----MGVK-HFY-TDPKQ-----CKEELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHH-----TTCEEEEECSSSTTHHHHHH----TTCS-EEE-SSGGG-----CCSCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHh----cCCC-eec-CCHHH-----HhcCCCE
Confidence 36889999998753 5555555544 25699999999988887754 4443 333 33211 1237999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+-.-. + ...+..+.+.|+++|+++++.
T Consensus 238 vid~~g--------------------~-------~~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIP--------------------T-------HYDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCC--------------------S-------CCCHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------------------c-------HHHHHHHHHHHhcCCEEEEEC
Confidence 987422 0 123667778999999999864
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.62 E-value=0.041 Score=47.13 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=61.2
Q ss_pred CCCCEEEEec--ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCC
Q 025211 41 HHPVLCMEVG--CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlG--cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 115 (256)
+++.+||-.| .|.|..++.+++. .+++|++++.+++..+.+++ .|.+ .++. .++.+.........
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~-----~Ga~Vi~~~~~~~~~~~~~~----~Ga~-~~~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKK-----AKCHVIGTCSSDEKSAFLKS----LGCD-RPINYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----TTCS-EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHH----cCCc-EEEecCChhHHHHHHHhcCCC
Confidence 5789999998 3456666666554 25689999999988877764 3433 2222 12222222222346
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+.+-. ...+..+.+.|+++|+++++.
T Consensus 232 ~D~vid~~g----------------------------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 232 VDVVYESVG----------------------------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEEEECSC----------------------------THHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCC----------------------------HHHHHHHHHHHhcCCEEEEEe
Confidence 999987521 134677788999999998854
No 357
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.48 E-value=0.0042 Score=65.91 Aligned_cols=108 Identities=26% Similarity=0.302 Sum_probs=53.0
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCC--CceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVP--GVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~--~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.+..+|||+|.|+|..+..+...+.. .+ ...++-+|+++...+.+++++....+ ..-..|..+. ..+...+||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~-~~~~~~~yt~td~s~~~~~~a~~~f~~~di--~~~~~d~~~~-~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNT-QPVMDLDYTATDRNPQALEAAQAKLEQLHV--TQGQWDPANP-APGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTT-SSSCEEEEEEECSSSSSTTTTTTTHHHHTE--EEECCCSSCC-CC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcc-cCcccceEEEecCChHHHHHHHHHhhhccc--cccccccccc-ccCCCCceeE
Confidence 35679999999999876655555532 12 24688899998888777777653211 1111122111 0112357999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
||+.-..+... .....+.++.++|||||++++..
T Consensus 1315 via~~vl~~t~---------------------~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1315 LVCNCALATLG---------------------DPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEECC-----------------------------------------CCEEEEEE
T ss_pred EEEcccccccc---------------------cHHHHHHHHHHhcCCCcEEEEEe
Confidence 99854332211 14567889999999999998865
No 358
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.36 E-value=0.05 Score=47.19 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=62.1
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---c-hhhchhhhcC-
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINT---D-IASGLEKRLA- 113 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d-~~~~~~~~~~- 113 (256)
+++.+||-.|+|. |..++.+++.+ ++ .|+++|.+++.++.+++ .|.+ ++.. + +.+.......
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~-----Ga~~Vi~~~~~~~~~~~a~~----lGa~--~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLL-----GAAVVIVGDLNPARLAHAKA----QGFE--IADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TCSEEEEEESCHHHHHHHHH----TTCE--EEETTSSSCHHHHHHHHHSS
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHC-----CCCeEEEEcCCHHHHHHHHH----cCCc--EEccCCcchHHHHHHHHhCC
Confidence 5789999999754 56666666552 44 79999999998888764 3442 2221 1 2222222212
Q ss_pred CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
..+|+|+-.-.-.......... +... ....+..+.++|+++|+++++.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~------~~~~------~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGA------KHEA------PATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGG------GSBC------TTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEECCCCcccccccccc------cccc------hHHHHHHHHHHHhcCCEEEEec
Confidence 3699998743210000000000 0000 1235777888999999998753
No 359
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.26 E-value=0.037 Score=47.04 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=59.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CCCc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~~f 116 (256)
++.+||-+|+| .++..+.+.+.. .++ +|+++|.+++..+.+++ .+.+ .++. .++.+...... ...+
T Consensus 167 ~g~~VlV~GaG--~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~----~Ga~-~~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAG--PLGLLGIAVAKA--SGAYPVIVSEPSDFRRELAKK----VGAD-YVINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCS--HHHHHHHHHHHH--TTCCSEEEECSCHHHHHHHHH----HTCS-EEECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCC--HHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHH----hCCC-EEECCCCcCHHHHHHHHcCCCCC
Confidence 78899999984 444434443332 245 89999999988887764 2332 2222 12222222221 2369
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+..-. ....+..+.+.|+++|+++.+.
T Consensus 238 D~vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 238 DVFLEFSG---------------------------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEEECSC---------------------------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC---------------------------CHHHHHHHHHHHhcCCEEEEEc
Confidence 99987532 1345777888999999998854
No 360
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.25 E-value=0.071 Score=46.16 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=46.1
Q ss_pred CccccCCchHHHHHHH----HHhhcccccCCCCEEEEecccccHHHHHHHHHhccc---CCCceEEEEeCCHHHHHHHHH
Q 025211 16 EVYEPCDDSFALVDAL----LADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQE---VPGVQYIATDINPYAVEVTRK 88 (256)
Q Consensus 16 ~~~~p~~~~~~l~~~l----~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~---~~~~~v~giD~~~~~i~~a~~ 88 (256)
+++++-..+.++.+.+ .+.+.......+-.|+|+|.|+|.+...+...+... +...+++.||+|+...+.-++
T Consensus 50 DF~Tapeis~~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~ 129 (387)
T 1zkd_A 50 DFTTSPEISQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQT 129 (387)
T ss_dssp -CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHH
T ss_pred CeeCCCchHHHHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHH
Confidence 4444422244554444 443322222334689999999999987777665421 124589999999988775555
Q ss_pred HH
Q 025211 89 TL 90 (256)
Q Consensus 89 ~~ 90 (256)
.+
T Consensus 130 ~L 131 (387)
T 1zkd_A 130 LL 131 (387)
T ss_dssp HS
T ss_pred Hh
Confidence 44
No 361
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.23 E-value=0.63 Score=46.54 Aligned_cols=157 Identities=12% Similarity=0.036 Sum_probs=86.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------------ 109 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------------ 109 (256)
...+++|+.||.|.+.+.+.+. +-.-.+.++|+++.+++.-+.|.. ...++.+|+.+...
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A----G~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~gdi~~~~~ 921 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA----GISETLWAIEMWDPAAQAFRLNNP----GTTVFTEDCNVLLKLVMAGEVTNSLG 921 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT----TSEEEEEEECCSHHHHHHHHHHCT----TSEEECSCHHHHHHHHTTTCSBCSSC
T ss_pred CCceEEecccCccHHHHHHHHC----CCCceEEEEECCHHHHHHHHHhCC----CCcEeeccHHHHhHhhhccchhhhhh
Confidence 4578999999999988776554 111158899999999988777642 22566666654321
Q ss_pred -hh-cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------CHHH
Q 025211 110 -KR-LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------DPSQ 181 (256)
Q Consensus 110 -~~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~~ 181 (256)
.. ..+.+|+|+..||--..+......... .. +.. ...+..+++ +.+.++|.-+++=..++.. ....
T Consensus 922 ~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~---~~-d~R-~~L~~~~lr-iv~~~rPk~fv~ENV~glls~~~g~~~~~ 995 (1330)
T 3av4_A 922 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT---YS-KFK-NSLVVSFLS-YCDYYRPRFFLLENVRNFVSYRRSMVLKL 995 (1330)
T ss_dssp CBCCCTTTCSEEEECCCCTTTCSSSCCCHHH---HH-HHH-HSHHHHHHH-HHHHHCCSEEEEEEEGGGGTTTTTHHHHH
T ss_pred hhccccCccceEEecCCCccccccccccccc---cc-chh-hHHHHHHHH-HHHHhcCcEEEEeccHHHhccCccHHHHH
Confidence 01 124689999999987766432110000 00 000 001223333 3345788633332222211 1245
Q ss_pred HHHHHHHcCCcEEEEEe------cCCCCccEEEEEEE
Q 025211 182 ICLQMMEKGYAARIVVQ------RSTEEENLHIIKFW 212 (256)
Q Consensus 182 ~~~~~~~~g~~~~~~~~------~~~~~~~~~l~~~~ 212 (256)
+...|.+.||.+..... ..+...+++++-.+
T Consensus 996 il~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r 1032 (1330)
T 3av4_A 996 TLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1032 (1330)
T ss_dssp HHHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEEC
T ss_pred HHHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEec
Confidence 67777888987654321 12445666666554
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.15 E-value=0.035 Score=47.94 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=59.8
Q ss_pred CCCCEEEEeccc-ccHHHHHHHHHhcccCCC-ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc------chhhchhhhc
Q 025211 41 HHPVLCMEVGCG-SGYVITSLALMLGQEVPG-VQYIATDINPYAVEVTRKTLEAHNVHADLINT------DIASGLEKRL 112 (256)
Q Consensus 41 ~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~-~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~------d~~~~~~~~~ 112 (256)
+++.+||-.|+| .|..++.+++. -+ ++|+++|.+++..+.+++ .|.+ .++.. |+.+......
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga~~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARS-----LGAENVIVIAGSPNRLKLAEE----IGAD-LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHH-----TTBSEEEEEESCHHHHHHHHH----TTCS-EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH-----cCCceEEEEcCCHHHHHHHHH----cCCc-EEEeccccCcchHHHHHHHHh
Confidence 578999999954 24444444443 24 489999999988887763 3443 33322 2222222222
Q ss_pred C-CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 A-GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~-~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
. ..+|+|+-+-.. ...+..+.++|+++|+++++.
T Consensus 264 ~g~g~Dvvid~~g~---------------------------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD---------------------------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC---------------------------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC---------------------------HHHHHHHHHHHhcCCEEEEEe
Confidence 2 369999874220 134677788999999998854
No 363
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.14 E-value=0.14 Score=43.38 Aligned_cols=99 Identities=18% Similarity=0.096 Sum_probs=61.4
Q ss_pred cCCCCEEEEecccccH-HHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhc-CCC
Q 025211 40 EHHPVLCMEVGCGSGY-VITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRL-AGL 115 (256)
Q Consensus 40 ~~~~~~VLDlGcG~G~-~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~-~~~ 115 (256)
.+++.+||=+|+|.+. ..+.+++. ..+++|+++|.+++..+.+++ .+.+. +....|..+...... ...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~----~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKN----VFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH----TSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHH----hCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcCCCC
Confidence 3678999999987643 33333333 346799999999988776654 34332 222334433333322 235
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|.++.+.. -...+..+.+.|+++|+++++.
T Consensus 233 ~d~~~~~~~---------------------------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 233 VQSAIVCAV---------------------------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEEECCS---------------------------CHHHHHHHHHTEEEEEEEEECC
T ss_pred ceEEEEecc---------------------------CcchhheeheeecCCceEEEEe
Confidence 777776422 2456778888999999998854
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.14 E-value=0.028 Score=47.77 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=60.0
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE--cchhhchhhhcC-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN--TDIASGLEKRLA-GL 115 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~--~d~~~~~~~~~~-~~ 115 (256)
+++.+||=.|+ |.|..++.+++. .+++|++++.+++..+.+++ .+.+ .++. .++.+....... ..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~----~ga~-~v~~~~~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKG-----MGAKVIAVVNRTAATEFVKS----VGAD-IVLPLEEGWAKAVREATGGAG 227 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHH----HTCS-EEEESSTTHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHh----cCCc-EEecCchhHHHHHHHHhCCCC
Confidence 57899999987 345565555554 25699999999988877765 2433 2222 233332222222 36
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+.+-. ...+..+.+.|+++|+++++.
T Consensus 228 ~Dvvid~~g----------------------------~~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 228 VDMVVDPIG----------------------------GPAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEEESCC------------------------------CHHHHHHTEEEEEEEEEC-
T ss_pred ceEEEECCc----------------------------hhHHHHHHHhhcCCCEEEEEE
Confidence 999987521 123667778999999999854
No 365
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.04 E-value=0.42 Score=40.46 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=67.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC----------------------Ccce
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN----------------------VHAD 98 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~----------------------~~~~ 98 (256)
.+...|+.+|||......-+... +++..++-+|. |+.++.-++.+...+ -...
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~----~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 170 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQM----FPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYK 170 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHH----CTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCc----CCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceE
Confidence 35689999999999965444332 46778888887 888877677666541 1227
Q ss_pred EEEcchhhch------hhh-cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 99 LINTDIASGL------EKR-LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 99 ~~~~d~~~~~------~~~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
++..|+.+.. ... ......++++-......+ .+....+++.+.+.. |+|.+++
T Consensus 171 ~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~-------------------~~~~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 171 LAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMH-------------------NNESQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp EEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-------------------HHHHHHHHHHHHHHC-SSEEEEE
T ss_pred EEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCC-------------------HHHHHHHHHHHHhhC-CCcEEEE
Confidence 8888887641 111 124466777743322211 123567788887766 7777654
Q ss_pred EE
Q 025211 172 VT 173 (256)
Q Consensus 172 ~~ 173 (256)
..
T Consensus 231 ~e 232 (334)
T 1rjd_A 231 YD 232 (334)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.97 E-value=0.051 Score=46.34 Aligned_cols=95 Identities=20% Similarity=0.151 Sum_probs=59.0
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 115 (256)
+++++||-.|. |.|...+.+++. .+++|+++|.+++..+.+++ .+.+ .++. .++.+.........
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~----lGa~-~~~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARA-----FGAEVYATAGSTGKCEACER----LGAK-RGINYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHHSSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHh----cCCC-EEEeCCchHHHHHHHHHhCCC
Confidence 57889998853 345555444443 25689999999998887765 2333 2222 12222222222357
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 236 ~Dvvid~~g----------------------------~~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILDMIG----------------------------AAYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEEESCC----------------------------GGGHHHHHHTEEEEEEEEECC
T ss_pred ceEEEECCC----------------------------HHHHHHHHHHhccCCEEEEEE
Confidence 999987522 123566778999999998854
No 367
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.96 E-value=0.064 Score=45.49 Aligned_cols=95 Identities=13% Similarity=0.091 Sum_probs=59.7
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhc-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~-~~ 114 (256)
+++.+||-.|+ |.|...+.+++. .+++|+++|.+++..+.+++ .+.. .++.. ++.+...... ..
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~-----~G~~Vi~~~~~~~~~~~~~~----~ga~-~~~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKL-----FGARVIATAGSEDKLRRAKA----LGAD-ETVNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----HTCS-EEEETTSTTHHHHHHHHTTTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHh----cCCC-EEEcCCcccHHHHHHHHhCCC
Confidence 57899999998 456665555554 25699999999998887754 2332 22211 2222222221 24
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+|+.+-. ...+..+.+.|+++|+++++.
T Consensus 235 ~~d~vi~~~g----------------------------~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 235 GADKVVDHTG----------------------------ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp CEEEEEESSC----------------------------SSSHHHHHHHEEEEEEEEESS
T ss_pred CceEEEECCC----------------------------HHHHHHHHHhhccCCEEEEEe
Confidence 7999988522 012566677899999998754
No 368
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.90 E-value=0.21 Score=40.29 Aligned_cols=127 Identities=13% Similarity=0.032 Sum_probs=73.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
++++||=.| |+|.++..+++.|.++ .+++|++++.++...+.+.+.+...+....++.+|+.+... ... -
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHh-cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 457777666 6677888888887651 25689999999887776666666555445788888765421 111 1
Q ss_pred CCccEEEECCCCCCCCCcccc-cccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEVG-REGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+.+|+||.|--.......... .......+... ..-...+++.+.+.++++|+++++.
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N---~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTN---FFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHH---THHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhhee---eeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 479999987643322111000 00001001000 0012345666777777788888765
No 369
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.84 E-value=0.16 Score=44.08 Aligned_cols=72 Identities=8% Similarity=0.132 Sum_probs=43.6
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcC-C
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLA-G 114 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~-~ 114 (256)
+++.+||=.|+|. |..++.+++. .++ .|+++|.+++..+.+++. |.+ .++. .|+.+....... .
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~-----~Ga~~Vi~~~~~~~~~~~~~~l----Ga~-~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKH-----AGASKVILSEPSEVRRNLAKEL----GAD-HVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH-----TTCSEEEEECSCHHHHHHHHHH----TCS-EEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-----cCCCEEEEECCCHHHHHHHHHc----CCC-EEEcCCCCCHHHHHHHHhCCC
Confidence 5788999998742 4444444443 245 899999999988887653 432 2222 233333322222 3
Q ss_pred CccEEEEC
Q 025211 115 LVDVMVVN 122 (256)
Q Consensus 115 ~fD~Ii~n 122 (256)
.+|+|+-.
T Consensus 282 g~D~vid~ 289 (404)
T 3ip1_A 282 GAKLFLEA 289 (404)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 69999874
No 370
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.80 E-value=0.1 Score=43.74 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=57.8
Q ss_pred EEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211 45 LCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN 122 (256)
Q Consensus 45 ~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n 122 (256)
+||=.|+ |.|..++.+++.+ +++|++++.+++..+.+++ .|.+ .++..+-.+.......+.+|+++-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-----Ga~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-----GYQVAAVSGRESTHGYLKS----LGAN-RILSRDEFAESRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-----TCCEEEEESCGGGHHHHHH----HTCS-EEEEGGGSSCCCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHh----cCCC-EEEecCCHHHHHhhcCCCccEEEEC
Confidence 3888886 4566666666652 5689999999988888765 3433 2222111111122223579988763
Q ss_pred CCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 123 PPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 123 pP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-. ...+..+.+.|+++|+++.+.
T Consensus 219 ~g----------------------------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 219 VG----------------------------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp SC----------------------------HHHHHHHHHTEEEEEEEEECC
T ss_pred CC----------------------------cHHHHHHHHHHhcCCEEEEEe
Confidence 11 136788888999999999854
No 371
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.76 E-value=0.087 Score=44.94 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=57.6
Q ss_pred CEEEEecccccHHHHHH-HHHh-cccCCCce-EEEEeCCHH---HHHHHHHHHHHcCCcceE--EEcchhhchhhhcCCC
Q 025211 44 VLCMEVGCGSGYVITSL-ALML-GQEVPGVQ-YIATDINPY---AVEVTRKTLEAHNVHADL--INTDIASGLEKRLAGL 115 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l-~~~l-~~~~~~~~-v~giD~~~~---~i~~a~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~ 115 (256)
.+||=.|+ |.++..+ .+.+ .. .++. |+++|.+++ ..+.+++ .|.+ .+ ...|+.+ .... .+.
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~--~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~~-i~~~-~gg 242 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDD--KGYENLYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVED-VPDV-YEQ 242 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCT--TCCCEEEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGGG-HHHH-SCC
T ss_pred CEEEEECC--CHHHHHHHHHHHHHH--cCCcEEEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHHH-HHHh-CCC
Confidence 89999997 4555555 5544 32 3556 999999887 7777653 3432 12 0112223 2232 347
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-.-. ....+..+.+.|+++|+++++.
T Consensus 243 ~Dvvid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 243 MDFIYEATG---------------------------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEEECSC---------------------------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCC---------------------------ChHHHHHHHHHHhcCCEEEEEe
Confidence 999987421 1245778888999999998854
No 372
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.75 E-value=0.08 Score=45.14 Aligned_cols=95 Identities=17% Similarity=0.239 Sum_probs=57.6
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhc-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~-~~ 114 (256)
+++++||-.|+ |.|...+.+++. .+++|++++.+++..+.+++ .+.. .++.. +..+...... ..
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~----~ga~-~~~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARA-----YGLKILGTAGTEEGQKIVLQ----NGAH-EVFNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----TTCS-EEEETTSTTHHHHHHHHHCTT
T ss_pred CCcCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHH----cCCC-EEEeCCCchHHHHHHHHcCCC
Confidence 57899999997 334444433333 25799999999988776543 3432 22211 2222221111 23
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 239 ~~D~vi~~~G----------------------------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEMLA----------------------------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CEEEEEESCH----------------------------HHHHHHHHHHEEEEEEEEECC
T ss_pred CcEEEEECCC----------------------------hHHHHHHHHhccCCCEEEEEe
Confidence 6999988521 134667788999999998854
No 373
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.75 E-value=0.054 Score=45.56 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=60.1
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~ 114 (256)
+++++||-.|+ |.|...+.+++.. +++|++++.+++..+.+++ .|.+ .++. .++.+...... ..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~----~Ga~-~~~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL-----GAKLIGTVSSPEKAAHAKA----LGAW-ETIDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHH----cCCC-EEEeCCCccHHHHHHHHhCCC
Confidence 57899998883 3455555555542 5689999999998887764 2332 2222 22222222222 24
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+|+.+-. ...+..+.+.|+++|+++++.
T Consensus 209 g~Dvvid~~g----------------------------~~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 209 KCPVVYDGVG----------------------------QDTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CEEEEEESSC----------------------------GGGHHHHHTTEEEEEEEEECC
T ss_pred CceEEEECCC----------------------------hHHHHHHHHHhcCCCEEEEEe
Confidence 6999987521 123667788999999999864
No 374
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.66 E-value=0.068 Score=45.10 Aligned_cols=95 Identities=18% Similarity=0.190 Sum_probs=59.2
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~ 114 (256)
+++.+||-.|+ |.|...+.+++. .+++|++++.+++..+.+++ .+.+ .++. .++.+...... ..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~----~ga~-~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKM-----KGAHTIAVASTDEKLKIAKE----YGAE-YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----TTCS-EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHH----cCCc-EEEeCCCchHHHHHHHHhCCC
Confidence 57899999984 344454444443 35699999999988887654 3432 2222 22222222221 34
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+|+.+-. ...+..+.++|+++|+++++.
T Consensus 217 g~D~vid~~g----------------------------~~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVG----------------------------KDTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCG----------------------------GGGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCC----------------------------hHHHHHHHHHhccCCEEEEEc
Confidence 6999987521 133667778999999999854
No 375
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.56 E-value=0.1 Score=44.45 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=58.7
Q ss_pred CCC--CEEEEecccccHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCC
Q 025211 41 HHP--VLCMEVGCGSGYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAG 114 (256)
Q Consensus 41 ~~~--~~VLDlGcG~G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~ 114 (256)
+++ ++||-.|++ |.++..+++.+.. .++ +|+++|.+++..+.+++. .+.. .++. .++.+.......+
T Consensus 157 ~~g~~~~vlI~Gas-ggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~~---~g~~-~~~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 157 TAGSNKTMVVSGAA-GACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTSE---LGFD-AAINYKKDNVAEQLRESCPA 229 (357)
T ss_dssp CTTSCCEEEESSTT-BHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHT---SCCS-EEEETTTSCHHHHHHHHCTT
T ss_pred CCCCccEEEEECCC-cHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHHH---cCCc-eEEecCchHHHHHHHHhcCC
Confidence 467 899999873 3333334444332 256 899999998877766542 2332 2221 1222222222223
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+++.+-. ...+..+.++|+++|+++++.
T Consensus 230 ~~d~vi~~~G----------------------------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 230 GVDVYFDNVG----------------------------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp CEEEEEESCC----------------------------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCEEEECCC----------------------------HHHHHHHHHHhccCcEEEEEC
Confidence 7999988521 145777888999999998754
No 376
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.43 E-value=0.051 Score=46.44 Aligned_cols=97 Identities=19% Similarity=0.094 Sum_probs=57.9
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh-hchhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA-SGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~fD~ 118 (256)
+++.+||-+|+|. |..++.+++.+ +++|+++|.+++..+.+++ .|.+ .++..+-. +..... .+.+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~-----Ga~Vi~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~~~~~~-~~~~D~ 246 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAM-----GAETYVISRSSRKREDAMK----MGAD-HYIATLEEGDWGEKY-FDTFDL 246 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHH-----TCEEEEEESSSTTHHHHHH----HTCS-EEEEGGGTSCHHHHS-CSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-----CCEEEEEcCCHHHHHHHHH----cCCC-EEEcCcCchHHHHHh-hcCCCE
Confidence 5789999999842 44544444442 4689999999888887765 3433 23322111 111111 257999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+..-.... ...+..+.+.|+++|+++.+.
T Consensus 247 vid~~g~~~-------------------------~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 247 IVVCASSLT-------------------------DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEECCSCST-------------------------TCCTTTGGGGEEEEEEEEECC
T ss_pred EEECCCCCc-------------------------HHHHHHHHHHhcCCCEEEEec
Confidence 987532100 012455677899999988743
No 377
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.31 E-value=0.079 Score=44.52 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=57.4
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~ 114 (256)
+++++||-.|+ |.|...+.+++. . +++|+++|.+++..+.+++ .+.. .++. .+..+...... ..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~---~--G~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKA---L--GAKLIGTVGTAQKAQSALK----AGAW-QVINYREEDLVERLKEITGGK 208 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH---H--TCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHH----cCCC-EEEECCCccHHHHHHHHhCCC
Confidence 57899999984 344444333333 2 5689999999988877765 2332 2221 12222211111 24
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 209 ~~D~vi~~~g----------------------------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 209 KVRVVYDSVG----------------------------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CEEEEEECSC----------------------------GGGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCc----------------------------hHHHHHHHHHhcCCCEEEEEe
Confidence 6999988521 123667778999999998854
No 378
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.13 E-value=0.029 Score=47.65 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=58.0
Q ss_pred CCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCCc
Q 025211 42 HPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGLV 116 (256)
Q Consensus 42 ~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~f 116 (256)
++.+||-.|+|. |..++.+++. .++ +|+++|.+++..+.+++. . + .++. .++.+.........+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~-----~Ga~~Vi~~~~~~~~~~~~~~l-a----~-~v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRA-----SGAGPILVSDPNPYRLAFARPY-A----D-RLVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH-----TTCCSEEEECSCHHHHGGGTTT-C----S-EEECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----cCCCEEEEECCCHHHHHHHHHh-H----H-hccCcCccCHHHHHHHhcCCCC
Confidence 788999999842 4444444443 255 899999999887776542 1 1 2221 122222222113469
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+..-. ....++.+.+.|+++|+++++.
T Consensus 233 D~vid~~g---------------------------~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 233 EVLLEFSG---------------------------NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EEEEECSC---------------------------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC---------------------------CHHHHHHHHHHHhcCCEEEEEe
Confidence 99987422 1245777888999999988754
No 379
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.10 E-value=0.28 Score=36.63 Aligned_cols=116 Identities=18% Similarity=0.137 Sum_probs=67.8
Q ss_pred HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch
Q 025211 25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI 104 (256)
Q Consensus 25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~ 104 (256)
+.+.+|+..... .-..-|||+|-|+|.-- ..|.+..|+-.|+++|-.-.+-.. .......++.+|+
T Consensus 27 R~~L~~a~~~v~----~~~GpVlElGLGNGRTy----dHLRe~~P~R~I~vfDR~~~~hp~------~~P~~e~~ilGdi 92 (174)
T 3iht_A 27 RACLEHAIAQTA----GLSGPVYELGLGNGRTY----HHLRQHVQGREIYVFERAVASHPD------STPPEAQLILGDI 92 (174)
T ss_dssp HHHHHHHHHHTT----TCCSCEEEECCTTCHHH----HHHHHHCCSSCEEEEESSCCCCGG------GCCCGGGEEESCH
T ss_pred HHHHHHHHHHhc----CCCCceEEecCCCChhH----HHHHHhCCCCcEEEEEeeeccCCC------CCCchHheecccH
Confidence 445566666654 35678999999999953 344444888899999953221110 1112238999999
Q ss_pred hhchhh---hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 105 ASGLEK---RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 105 ~~~~~~---~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
.+.++. ++..+.-++-++.-... ++. .......+-.-+..+|.|||+++-
T Consensus 93 ~~tL~~~~~r~g~~a~LaHaD~G~g~--------~~~---------d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 93 RETLPATLERFGATASLVHADLGGHN--------REK---------NDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHHHHHHCSCEEEEEECCCCSC--------HHH---------HHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHhcCCceEEEEeecCCCC--------cch---------hHHHHHhhhHHHHHHhcCCcEEEe
Confidence 988764 23444444444322111 000 011223334456789999999886
No 380
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=93.97 E-value=1.1 Score=36.49 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=56.1
Q ss_pred cccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC-CHHHHHHHHHHHHHcCCc
Q 025211 18 YEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-NPYAVEVTRKTLEAHNVH 96 (256)
Q Consensus 18 ~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-~~~~i~~a~~~~~~~~~~ 96 (256)
+.|+..++..-+...+.+-. ...+++||=.|++ |.++.++++.+.++ +++|+.++. +++..+...+.+...+..
T Consensus 6 ~~~~~~~~~~~n~~~~~mm~--~~~~k~~lVTGas-~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 4da9_A 6 HHSSGVDLGTENLYFQSMMT--QKARPVAIVTGGR-RGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGAR 80 (280)
T ss_dssp -----------------CCS--CCCCCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCC
T ss_pred cCcccccccccchhhhhhhh--ccCCCEEEEecCC-CHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCc
Confidence 33444344444444333311 2356778877765 45677777777654 678999995 777777666666665655
Q ss_pred ceEEEcchhhchh--hhc------CCCccEEEECCCC
Q 025211 97 ADLINTDIASGLE--KRL------AGLVDVMVVNPPY 125 (256)
Q Consensus 97 ~~~~~~d~~~~~~--~~~------~~~fD~Ii~npP~ 125 (256)
..++..|+.+... ... -+++|++|.|--.
T Consensus 81 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 81 VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp EEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 6788888876531 111 1479999998654
No 381
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.82 E-value=0.73 Score=33.17 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=49.6
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMV 120 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii 120 (256)
.++|+=+|+ |.++..+++.|.+. +..|+++|.+++.++.+++. + ..++.+|..+.. ....-..+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~----~--~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE----G--FDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT----T--CEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC----C--CcEEECCCCCHHHHHhCCcccCCEEE
Confidence 457888887 55788888887654 56899999999887766542 2 367778876542 121235789998
Q ss_pred ECCC
Q 025211 121 VNPP 124 (256)
Q Consensus 121 ~npP 124 (256)
...|
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8654
No 382
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.79 E-value=0.16 Score=43.27 Aligned_cols=97 Identities=12% Similarity=-0.022 Sum_probs=56.7
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhc-CCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRL-AGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~-~~~f 116 (256)
+++++||-.|++ |.++..+++.+.. .+++|+++|.+++..+.+++ .+.+ .++.. +..+...... ...+
T Consensus 161 ~~g~~vlV~Ga~-ggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGL-SGVGTAAIQLTRM--AGAIPLVTAGSQKKLQMAEK----LGAA-AGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCc-cHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH----cCCc-EEEecCChHHHHHHHHHhcCCCc
Confidence 578999998842 2233333443332 25699999999988887743 2332 12211 2222222211 2469
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+++.+-. ...+..+.+.|+++|+++++.
T Consensus 233 d~vi~~~G----------------------------~~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIG----------------------------GSYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSC----------------------------GGGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCC----------------------------chHHHHHHHhccCCCEEEEEe
Confidence 99987522 013566678899999998854
No 383
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.76 E-value=0.15 Score=42.92 Aligned_cols=95 Identities=22% Similarity=0.141 Sum_probs=58.5
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhh-cCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKR-LAG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~-~~~ 114 (256)
+++++||-.|+ |.|...+.+++. .+++|+++|.+++..+.+++ .+.. .++.. +..+..... ...
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~~Vi~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARH-----LGATVIGTVSTEEKAETARK----LGCH-HTINYSTQDFAEVVREITGGK 213 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHH----cCCC-EEEECCCHHHHHHHHHHhCCC
Confidence 57899999985 455555444443 25699999999988877754 2332 22211 222222111 124
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+|+++.+-. + ..++.+.+.|+++|+++++.
T Consensus 214 ~~d~vi~~~g--------------------~--------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 214 GVDVVYDSIG--------------------K--------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CEEEEEECSC--------------------T--------TTHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEECCc--------------------H--------HHHHHHHHhhccCCEEEEEe
Confidence 6999987522 0 23667778999999998754
No 384
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.75 E-value=0.88 Score=37.01 Aligned_cols=125 Identities=19% Similarity=0.169 Sum_probs=73.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC------------HHHHHHHHHHHHHcCCcceEEEcchhhchh
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN------------PYAVEVTRKTLEAHNVHADLINTDIASGLE 109 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~------------~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~ 109 (256)
.+++||=.|++. .++.++++.+.++ +++|+.+|.+ ...++.+...+...+....++..|+.+...
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 567888888664 5577777777654 6789999987 666666666666555555788888765421
Q ss_pred --hhc------CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 110 --KRL------AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 110 --~~~------~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
... -+++|++|.|--+..... +.........+... ..-...+++.+...++.+|+++.+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~~~N---~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGA-HLPVQAFADAFDVD---FVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCT-TCCTHHHHHHHHHH---THHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccC-cCCHHHHHHHhhhh---hhhhHHHHHHHHHHhhcCcEEEEec
Confidence 111 147999999875543221 10000001111000 0012344566777788889888754
No 385
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.57 E-value=0.18 Score=41.81 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=57.2
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcch-hhchhhhcCCCcc
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDI-ASGLEKRLAGLVD 117 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~fD 117 (256)
+++.+||-.|+ |.|...+.+++. .+++|+++|.+++..+.+++ .|.+ .++..+- .+..... ..+|
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~----~ga~-~~~~~~~~~~~~~~~--~~~d 191 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARA-----MGLRVLAAASRPEKLALPLA----LGAE-EAATYAEVPERAKAW--GGLD 191 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSGGGSHHHHH----TTCS-EEEEGGGHHHHHHHT--TSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHh----cCCC-EEEECCcchhHHHHh--cCce
Confidence 57899999997 345555555554 25699999999888777653 3433 2222111 1111111 5799
Q ss_pred EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+. -.- ..+..+.+.|+++|+++.+.
T Consensus 192 ~vid-~g~----------------------------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 192 LVLE-VRG----------------------------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEE-CSC----------------------------TTHHHHHTTEEEEEEEEEC-
T ss_pred EEEE-CCH----------------------------HHHHHHHHhhccCCEEEEEe
Confidence 9876 321 12567778999999988754
No 386
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.53 E-value=0.27 Score=42.06 Aligned_cols=95 Identities=12% Similarity=0.130 Sum_probs=59.8
Q ss_pred CCCCEEEEeccc--ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhcCCC
Q 025211 41 HHPVLCMEVGCG--SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG--~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 115 (256)
.++.+||=.|++ .|..++.+++.. +++|+++. +++..+.+++ .|.+ .++. .|+.+.......+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-----Ga~Vi~~~-~~~~~~~~~~----lGa~-~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-----GYIPIATC-SPHNFDLAKS----RGAE-EVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-----TCEEEEEE-CGGGHHHHHH----TTCS-EEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEe-CHHHHHHHHH----cCCc-EEEECCCchHHHHHHHHccCC
Confidence 578899999883 677776666652 56888885 7776666543 4543 2332 23333333333456
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcc-ccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLL-SKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~ 173 (256)
+|+++-.-. -...+..+.+.| +++|+++.+.
T Consensus 232 ~d~v~d~~g---------------------------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCIT---------------------------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSC---------------------------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCC---------------------------chHHHHHHHHHhhcCCCEEEEEe
Confidence 999987421 134567777788 6999998743
No 387
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.45 E-value=0.37 Score=40.58 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=59.9
Q ss_pred CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CCC
Q 025211 41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AGL 115 (256)
Q Consensus 41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~~ 115 (256)
.++.+||=.|+|. |.+++.+++.+ ....++++|.+++..+.+++ .|.+. ++. .|..+...... ...
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~----G~~~vi~~~~~~~k~~~a~~----lGa~~-~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVAL----GAKSVTAIDISSEKLALAKS----FGAMQ-TFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHT----TCSEEEEEESCHHHHHHHHH----TTCSE-EEETTTSCHHHHHHHHGGGCS
T ss_pred CCCCEEEEECCCCcchHHHHHHHHc----CCcEEEEEechHHHHHHHHH----cCCeE-EEeCCCCCHHHHHHhhcccCC
Confidence 5789999998864 34444444442 22367899999998887765 34432 222 22222221111 245
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
+|+|+..-. ....++.+.++|+++|+++++..
T Consensus 230 ~d~v~d~~G---------------------------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 230 NQLILETAG---------------------------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SEEEEECSC---------------------------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccccccccc---------------------------ccchhhhhhheecCCeEEEEEec
Confidence 788876311 24567888889999999998543
No 388
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=93.38 E-value=0.78 Score=37.23 Aligned_cols=82 Identities=21% Similarity=0.224 Sum_probs=55.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC------------HHHHHHHHHHHHHcCCcceEEEcchhhchh
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN------------PYAVEVTRKTLEAHNVHADLINTDIASGLE 109 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~------------~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~ 109 (256)
.+++||=.|++ |.++.++++.|.++ +++|+.+|.+ ++.++...+.+...+....++..|+.+...
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 56788888854 55677778877654 6789999987 666666666666556556788888765421
Q ss_pred --hhc------CCCccEEEECCCCC
Q 025211 110 --KRL------AGLVDVMVVNPPYV 126 (256)
Q Consensus 110 --~~~------~~~fD~Ii~npP~~ 126 (256)
... -+++|++|.|--..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111 15799999987544
No 389
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.36 E-value=0.63 Score=37.49 Aligned_cols=128 Identities=13% Similarity=0.156 Sum_probs=72.3
Q ss_pred CCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhchh--hhc-----
Q 025211 42 HPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGLE--KRL----- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~~--~~~----- 112 (256)
.+++||=.|++.+ .++.++++.+.++ +++|+.++.++...+.+.+.....+- ...++..|+.+... ...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 5678888887632 3566677777654 67899999887666666555554443 34788888765431 111
Q ss_pred -CCCccEEEECCCCCCCC----C-cccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 113 -AGLVDVMVVNPPYVPTP----E-DEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 113 -~~~fD~Ii~npP~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
-+.+|+++.|.-+.... . .+.........+.. ...-...+++.+...++++|+++++..
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~---n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNI---SSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHH---HTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHH---hHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 14789999987654311 0 00000000000000 000122356677778888999888663
No 390
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.30 E-value=0.12 Score=44.17 Aligned_cols=94 Identities=18% Similarity=0.186 Sum_probs=57.4
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH---HHHHHHHHHHHHcCCcceEEEc-chhhchhhhcCCCccE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP---YAVEVTRKTLEAHNVHADLINT-DIASGLEKRLAGLVDV 118 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~---~~i~~a~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~fD~ 118 (256)
+++||-.|+ |.++..+++.+... +++|+++|.++ +..+.+++ .+.+ .+ .. ++.+.... ....+|+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v-~~~~~~~~~~~-~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YY-NSSNGYDKLKD-SVGKFDV 249 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EE-ECTTCSHHHHH-HHCCEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-ee-chHHHHHHHHH-hCCCCCE
Confidence 899999997 55555555544332 46999999987 76666654 2332 12 11 11111111 1257999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHH-HHHhhccccCeEEEEEEe
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKIL-PSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~ 174 (256)
|+.+-.- ...+ +.+.+.|+++|+++++..
T Consensus 250 vid~~g~---------------------------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 250 IIDATGA---------------------------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEECCCC---------------------------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred EEECCCC---------------------------hHHHHHHHHHHHhcCCEEEEEec
Confidence 9885321 1235 778889999999988543
No 391
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.26 E-value=0.12 Score=43.40 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=55.4
Q ss_pred CCCC-EEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-ch-hhchhhhcCCC
Q 025211 41 HHPV-LCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT-DI-ASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~-~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-d~-~~~~~~~~~~~ 115 (256)
+++. +||-.|+ |.|..++.+++. .+++|++++.+++..+.+++ .|.+. ++.. +. .+.........
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~-----~Ga~vi~~~~~~~~~~~~~~----lGa~~-~i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAK-----RGYTVEASTGKAAEHDYLRV----LGAKE-VLAREDVMAERIRPLDKQR 216 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCTTCHHHHHH----TTCSE-EEECC---------CCSCC
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHH----cCCcE-EEecCCcHHHHHHHhcCCc
Confidence 3454 7999987 455665555554 24689999999887777654 34332 2211 11 11111112346
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-+-. + ..+..+.+.|+++|+++++.
T Consensus 217 ~d~vid~~g--------------------~--------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 217 WAAAVDPVG--------------------G--------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEEECST--------------------T--------TTHHHHHHTEEEEEEEEECS
T ss_pred ccEEEECCc--------------------H--------HHHHHHHHhhccCCEEEEEe
Confidence 999987421 0 12566778999999998753
No 392
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=93.16 E-value=0.96 Score=36.35 Aligned_cols=127 Identities=13% Similarity=0.074 Sum_probs=72.7
Q ss_pred CCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------
Q 025211 41 HHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------ 111 (256)
Q Consensus 41 ~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------ 111 (256)
.++++||=.|++ +|.++.++++.+.++ +++|+.++.++...+.+++.....+ ...++..|+.+... ..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999874 467788888887754 5789999988655555554444433 24777888765421 11
Q ss_pred cCCCccEEEECCCCCCCC----C-cc-cccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 112 LAGLVDVMVVNPPYVPTP----E-DE-VGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 112 ~~~~fD~Ii~npP~~~~~----~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.-+++|++|.|.-+.... . .+ .........+...-. -...+.+.+...++++|+++++.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~---~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAY---SFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTT---HHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHH---HHHHHHHHHHHHhccCceEEEEe
Confidence 125799999987543321 0 00 000000000000000 12344566777788888888765
No 393
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=93.14 E-value=0.81 Score=36.77 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=57.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++. .++.++++.+.++ +++|+.+|.+++..+...+.+...+....++..|+.+... ... -
T Consensus 11 ~~k~vlVTGas~-gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAA-GIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSS-HHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 567888777654 5566777776654 5789999999988887777776666556778888765421 111 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|.-..
T Consensus 88 g~id~lv~nAg~~ 100 (256)
T 3gaf_A 88 GKITVLVNNAGGG 100 (256)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4799999986543
No 394
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.04 E-value=2.2 Score=35.60 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=69.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCC--c--ceEEEcchhhchhh-hc---
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNV--H--ADLINTDIASGLEK-RL--- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~--~--~~~~~~d~~~~~~~-~~--- 112 (256)
....|+++|||-=.- +..+. .+ +..++=+| .|..++..++.+...+. . ..++..|+.+.... ..
T Consensus 102 g~~QvV~LGaGlDTr----a~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g 174 (310)
T 2uyo_A 102 GIRQFVILASGLDSR----AYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAG 174 (310)
T ss_dssp TCCEEEEETCTTCCH----HHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTT
T ss_pred CCCeEEEeCCCCCch----hhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhcc
Confidence 346899999998884 45544 23 47899999 69999988888876542 1 27788888762211 11
Q ss_pred --CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211 113 --AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA 176 (256)
Q Consensus 113 --~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (256)
....=++++.......+. +....+++.+...+.||+.+++.....
T Consensus 175 ~d~~~Pt~~i~Egvl~Yl~~-------------------~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 175 FDPSARTAWLAEGLLMYLPA-------------------TAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp CCTTSCEEEEECSCGGGSCH-------------------HHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCCCCCEEEEEechHhhCCH-------------------HHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 122334444332221111 225788999988889999999865433
No 395
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.03 E-value=1 Score=35.81 Aligned_cols=82 Identities=21% Similarity=0.196 Sum_probs=55.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.| |+|.++..+++.+.++ +++|++++.++...+...+.+...+....++.+|+.+... ... .
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 467787777 5677788888887754 5789999999887766666655544445677888765421 111 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+.+|+||.|--..
T Consensus 87 ~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 87 GKVDILVNNAGGG 99 (255)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4799999876543
No 396
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.92 E-value=1.1 Score=36.91 Aligned_cols=127 Identities=12% Similarity=0.061 Sum_probs=71.2
Q ss_pred CCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------c
Q 025211 42 HPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------L 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~ 112 (256)
.+++||=.|.++| .++.++++.+.++ +++|+.++.++...+.+++.....+ ...++..|+.+... .. .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHHh
Confidence 5788898887654 4666677777654 5789999998766555555444433 34677788765421 11 1
Q ss_pred CCCccEEEECCCCCCC----CC-cccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 113 AGLVDVMVVNPPYVPT----PE-DEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
-+++|++|.|--+... .. .+.........+... ..-...+.+.+.+.++.+|+++.+..
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N---~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLIS---VYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHH---THHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHH---HHHHHHHHHHHHHhccCCCEEEEEee
Confidence 2579999998654321 00 010000000000000 00122345666677778899888663
No 397
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.88 E-value=0.74 Score=37.13 Aligned_cols=84 Identities=20% Similarity=0.183 Sum_probs=58.0
Q ss_pred CCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-CcceEEEcchhhchh--h------
Q 025211 41 HHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-VHADLINTDIASGLE--K------ 110 (256)
Q Consensus 41 ~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-~~~~~~~~d~~~~~~--~------ 110 (256)
-+++++|=-|++++ .++.++++.+.++ +++|+.+|.+++..+.+.+.+...+ ....++..|+.+... .
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36888998887543 4666777777654 6799999999888887777766544 344777888765421 0
Q ss_pred hcCCCccEEEECCCCC
Q 025211 111 RLAGLVDVMVVNPPYV 126 (256)
Q Consensus 111 ~~~~~fD~Ii~npP~~ 126 (256)
..-+++|+++.|-.+.
T Consensus 82 ~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHCCCSEEEECCCCC
T ss_pred HHhCCCCEEEeccccc
Confidence 0126899999986543
No 398
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=92.83 E-value=0.22 Score=40.98 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=39.3
Q ss_pred HHHHHhhccccCeEEEEEEeCCC--CHHHHHHHHHHcCCc-EEEEEec--CCCCccEEEEEEEecC
Q 025211 155 ILPSADKLLSKRGWLYLVTLTAN--DPSQICLQMMEKGYA-ARIVVQR--STEEENLHIIKFWRDF 215 (256)
Q Consensus 155 ~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~g~~-~~~~~~~--~~~~~~~~l~~~~~~~ 215 (256)
+++.+.++|+|||.+++...... ..+.+...+.+. |. ...+.+. ....|.+++....++.
T Consensus 236 al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~-F~~Vr~vKP~ASR~StEvf~La~gf~g~ 300 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQ-FKFSRVCKPKSSLEETEVLFVFIGYDRK 300 (320)
T ss_dssp THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT-EEEEEEECCTTCCSTTCEEEEEEEECCC
T ss_pred HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHh-cceeeeeCCCCccccceEEEEEEeecCC
Confidence 67778899999999999776555 455666666654 44 4444442 2345666666666553
No 399
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.66 E-value=1.1 Score=37.09 Aligned_cols=82 Identities=20% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++.++..++.+.+.+...+....++..|+.+... ... -
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 56788888876 45677777777654 5789999999998888777777666666788888766421 111 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+.+|++|.|.-+.
T Consensus 107 g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 GGVDVVFSNAGIV 119 (301)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4799999987554
No 400
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.66 E-value=1.1 Score=35.96 Aligned_cols=123 Identities=13% Similarity=0.090 Sum_probs=70.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++.+++.++...+.+ +....++..|+.+... .. .-
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788888865 55677778877654 679999999988776655543 3234777888765421 00 11
Q ss_pred CCccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+++|+++.|--......... ...+....+... ..-.-.+.+.+...++++|+++.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVN---TKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHH---THHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh---hHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 57999999865443221110 000001001000 0012234566777788889888765
No 401
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.58 E-value=0.21 Score=41.63 Aligned_cols=89 Identities=12% Similarity=0.079 Sum_probs=56.2
Q ss_pred cCCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccE
Q 025211 40 EHHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 40 ~~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
.+++.+||=.|+| .|..++.+++.+ +++|++++ +++..+.+++ .|.+ .++. | .+ .. ...+|+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~-----Ga~Vi~~~-~~~~~~~~~~----lGa~-~v~~-d-~~---~v-~~g~Dv 202 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA-----GYVVDLVS-ASLSQALAAK----RGVR-HLYR-E-PS---QV-TQKYFA 202 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH-----TCEEEEEC-SSCCHHHHHH----HTEE-EEES-S-GG---GC-CSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEE-ChhhHHHHHH----cCCC-EEEc-C-HH---Hh-CCCccE
Confidence 3588999999994 355555555543 56999999 8888887765 3432 3332 4 22 11 467999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+-.-. ...+..+.++|+++|+++.+.
T Consensus 203 v~d~~g----------------------------~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IFDAVN----------------------------SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EECC-----------------------------------TTGGGEEEEEEEEEEC
T ss_pred EEECCC----------------------------chhHHHHHHHhcCCCEEEEEe
Confidence 976311 112356778999999999863
No 402
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.34 E-value=1.8 Score=32.59 Aligned_cols=73 Identities=19% Similarity=0.232 Sum_probs=46.2
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc--hhhh-cCCCccEE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG--LEKR-LAGLVDVM 119 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~--~~~~-~~~~fD~I 119 (256)
+.+|+=+|+ |.++..+++.|.+.. +..|+++|.+++.++.+++ .+ ..++.+|..+. +... .-..+|+|
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~----~g--~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARY-GKISLGIEIREEAAQQHRS----EG--RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHH----TT--CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHH----CC--CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 567887765 677777777775430 4589999999988776543 23 25666776442 1121 12468999
Q ss_pred EECCC
Q 025211 120 VVNPP 124 (256)
Q Consensus 120 i~npP 124 (256)
+...|
T Consensus 110 i~~~~ 114 (183)
T 3c85_A 110 LLAMP 114 (183)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 98533
No 403
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=92.32 E-value=1.4 Score=35.93 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=53.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|+ +|.++.++++.+.++ +++|++++-+++.++...+.+...+. ...++.+|+.+... ...
T Consensus 27 ~~k~vlITGa-sggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 27 QGKKVIVTGA-SKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678887775 466777788877654 57899999998887766665554443 34777888765321 111
Q ss_pred CCCccEEEEC
Q 025211 113 AGLVDVMVVN 122 (256)
Q Consensus 113 ~~~fD~Ii~n 122 (256)
-+.+|++|.|
T Consensus 104 ~g~iD~li~n 113 (286)
T 1xu9_A 104 MGGLDMLILN 113 (286)
T ss_dssp HTSCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 1479999987
No 404
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.30 E-value=0.18 Score=42.40 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=57.1
Q ss_pred CCCC-EEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc-h-hhchhhhcCCC
Q 025211 41 HHPV-LCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD-I-ASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~-~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d-~-~~~~~~~~~~~ 115 (256)
+++. +||=.|+ |.|..++.+++.. +++|++++.+++..+.+++ .|.+ .++..+ . .+.........
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-----Ga~vi~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKR-----GYDVVASTGNREAADYLKQ----LGAS-EVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHH-----TCCEEEEESSSSTHHHHHH----HTCS-EEEEHHHHCSSCCCSSCCCC
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHH----cCCc-EEEECCCchHHHHHHhhcCC
Confidence 3454 7999987 4555555555542 4689999998877777654 3433 222211 1 11111112346
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-+-. ...+..+.+.|+++|+++++.
T Consensus 218 ~d~vid~~g----------------------------~~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 218 WQGAVDPVG----------------------------GKQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEEESCC----------------------------THHHHHHHTTEEEEEEEEECC
T ss_pred ccEEEECCc----------------------------HHHHHHHHHhhcCCCEEEEEe
Confidence 999987421 124677788999999998754
No 405
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.16 E-value=0.94 Score=39.86 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=59.7
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---ch-----------
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DI----------- 104 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~----------- 104 (256)
+++.+||=.|+ |.|..++.+++. .++++++++.+++..+.+++ .|.+ .++.. |.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~-----~Ga~vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALA-----GGANPICVVSSPQKAEICRA----MGAE-AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----HTCC-EEEETTTTTCCSEEETTEECH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----cCCeEEEEECCHHHHHHHHh----hCCc-EEEecCcCcccccccccccch
Confidence 57899999987 345565555554 35789999999988887754 3432 12211 11
Q ss_pred ------hhchhhhc-CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 105 ------ASGLEKRL-AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 105 ------~~~~~~~~-~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+...... ...+|+|+-+.. ...+..+.++|+++|+++++.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G----------------------------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG----------------------------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC----------------------------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC----------------------------chhHHHHHHHhhCCcEEEEEe
Confidence 01111211 247999987421 145777788999999998753
No 406
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.15 E-value=0.19 Score=44.13 Aligned_cols=77 Identities=19% Similarity=0.169 Sum_probs=49.2
Q ss_pred CccccCCc-hHHHHHHHHHhhcccc-cCCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHH
Q 025211 16 EVYEPCDD-SFALVDALLADRINLV-EHHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEA 92 (256)
Q Consensus 16 ~~~~p~~~-~~~l~~~l~~~~~~~~-~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~ 92 (256)
+.|.-.++ +.++.+.+..++..+- ......|+|+|.|+|.+...+...+.+..+ ..+++.||+|+...+.-++++..
T Consensus 109 GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 109 SDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp -CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 34444444 5555554443332211 112579999999999988877776654221 23799999999988877777654
No 407
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.09 E-value=1.2 Score=35.73 Aligned_cols=82 Identities=18% Similarity=0.207 Sum_probs=54.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC-CHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhcC-----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-NPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRLA----- 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~~----- 113 (256)
.+++||=.|+ +|.++..+++.+.++ +++|++++- ++...+...+.+...+....++.+|+.+... ...+
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4678887774 577788888887754 568999998 7777666655555545445778888765421 1111
Q ss_pred -CCccEEEECCCCC
Q 025211 114 -GLVDVMVVNPPYV 126 (256)
Q Consensus 114 -~~fD~Ii~npP~~ 126 (256)
+.+|++|.|....
T Consensus 97 ~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 97 FGGLDFVMSNSGME 110 (274)
T ss_dssp HSCEEEEECCCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 4789999876543
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.00 E-value=1.1 Score=39.37 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=58.5
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---ch-----------
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DI----------- 104 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~----------- 104 (256)
+++++||=.|+ |.|..++.+++. .++++++++.+++..+.+++ .|.+. ++.. |+
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~-----~Ga~vi~~~~~~~~~~~~~~----lGa~~-~i~~~~~~~~~~~~~~~~~~ 288 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKN-----GGGIPVAVVSSAQKEAAVRA----LGCDL-VINRAELGITDDIADDPRRV 288 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----TTCCC-EEEHHHHTCCTTGGGCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHh----cCCCE-EEeccccccccccccccccc
Confidence 57899999986 234555444443 35789999999988887753 34332 2211 11
Q ss_pred -------hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 105 -------ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 105 -------~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+.........+|+|+-+.. ...+..+.++|+++|+++++.
T Consensus 289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G----------------------------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 289 VETGRKLAKLVVEKAGREPDIVFEHTG----------------------------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEEECSC----------------------------HHHHHHHHHHSCTTCEEEESC
T ss_pred chhhhHHHHHHHHHhCCCceEEEECCC----------------------------chHHHHHHHHHhcCCEEEEEe
Confidence 11111112346999987521 134677778999999998854
No 409
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.98 E-value=1.3 Score=36.32 Aligned_cols=123 Identities=19% Similarity=0.103 Sum_probs=71.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~ 113 (256)
+++.+|=-|.+.| ++.++++.+.++ +++|+.+|.+++.++.+.+.+ +-....+..|+.+... .. .-
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 6788888887665 577777777654 679999999998877654433 4444667777655421 00 12
Q ss_pred CCccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 114 GLVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 114 ~~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
++.|++|.|--......-.. ...+-...+... ..-.-.+.+.+.+.|+.+|.++.+.
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vN---l~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRN---VKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHH---THHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHH---hHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 68999999864432221110 000000000000 0012233566778888999887765
No 410
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.95 E-value=0.26 Score=41.65 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=57.6
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE--cchhhchhhh-cCCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN--TDIASGLEKR-LAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~--~d~~~~~~~~-~~~~ 115 (256)
+++.+||-.|+ |.|..++.+++. .+++|+++ .+++..+.+++ .|.+. +. .|+.+..... ....
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~-----~Ga~Vi~~-~~~~~~~~~~~----lGa~~--i~~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALA-----RGARVFAT-ARGSDLEYVRD----LGATP--IDASREPEDYAAEHTAGQG 216 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEE-ECHHHHHHHHH----HTSEE--EETTSCHHHHHHHHHTTSC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEE-eCHHHHHHHHH----cCCCE--eccCCCHHHHHHHHhcCCC
Confidence 57899999984 345565555554 35689999 88887777654 34332 22 1122222121 1246
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-+-. ...+..+.+.|+++|+++.+.
T Consensus 217 ~D~vid~~g----------------------------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 217 FDLVYDTLG----------------------------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEEESSC----------------------------THHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEECCC----------------------------cHHHHHHHHHHhcCCeEEEEc
Confidence 999987421 134677778999999998753
No 411
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.94 E-value=1.2 Score=36.71 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=71.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC--HHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc-----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN--PYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL----- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~--~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~----- 112 (256)
.+++||=.|+ +|.++.++++.+.++ +++|+.++.+ ....+.+.+.+...+....++.+|+.+... ...
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4678888885 456677788877654 5689998876 344555555555555555777788765421 100
Q ss_pred -CCCccEEEECCCCCCCCCc--ccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 113 -AGLVDVMVVNPPYVPTPED--EVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 113 -~~~fD~Ii~npP~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
-+++|++|.|--....... +....+....+... ..-...+.+.+...++++|+++++..
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN---~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVN---VFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHH---THHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHH---hHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 1579999998654321110 10000001111000 00123456667778888999888653
No 412
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.82 E-value=1.6 Score=35.81 Aligned_cols=126 Identities=11% Similarity=0.111 Sum_probs=71.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH-HHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY-AVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~-~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++.++. ..+.+.+.+...+....++..|+.+... ...
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56788888865 55677778877654 578999998765 3444455555555555788888865421 111
Q ss_pred CCCccEEEECCCCCCCCCc--ccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPTPED--EVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-+++|++|.|--....... +....+....+... ..-...+++.+.+.++.+|+++.+.
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN---~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRIN---IFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHH---THHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHH---hHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 1579999998543321110 00000001111000 0012344666777888899888754
No 413
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=91.68 E-value=1.8 Score=34.93 Aligned_cols=127 Identities=19% Similarity=0.165 Sum_probs=72.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC-CHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-NPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.++++|=.|++ |.++.++++.+.++ +++|+.++. +.+..+...+.+...+....++..|+.+... ...
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56788888865 55677777777654 678888775 4555666666666656556788888766421 111
Q ss_pred CCCccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 113 AGLVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
-+++|++|.|.-......... ...+....+... ..-.-.+.+.+.+.++++|+++++..
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLN---TRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHH---THHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---hHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 147899998865543222110 000001000000 00122345667777888998888654
No 414
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.66 E-value=1.5 Score=36.03 Aligned_cols=127 Identities=11% Similarity=0.090 Sum_probs=71.3
Q ss_pred CCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|+++ ..++.++++.+.++ +++|+.++.++...+.+.+.....+- ..++..|+.+... ...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGV-KLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTC-CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCC-eEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467888888764 46677777777654 67899999987655555554444332 3677788765421 111
Q ss_pred CCCccEEEECCCCCCC----CC-cccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 113 AGLVDVMVVNPPYVPT----PE-DEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
-+++|++|.|--+... .. .+.........+.. ...-...+.+.+...++.+|+++.+..
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~v---N~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHI---SCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHH---HTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHH---HHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 1579999998654321 00 00000000000000 000123445667777888899888653
No 415
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.54 E-value=2 Score=37.38 Aligned_cols=96 Identities=17% Similarity=0.086 Sum_probs=62.0
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEE
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVV 121 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~ 121 (256)
.+|+=+|+ |.++..+++.|.+. +..|+++|.+++.++.+++ .+ ..++.+|..+.. ....-...|+|++
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CeEEEECC--CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 45666665 66777788877653 5689999999999987764 22 368888876642 2222357899988
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
..+- ......+-...+.+.|+..++.-.
T Consensus 75 ~~~~------------------------~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 75 AIDD------------------------PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp CCSS------------------------HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCC------------------------hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 5331 112333444556677887777643
No 416
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.45 E-value=0.9 Score=38.89 Aligned_cols=103 Identities=15% Similarity=0.061 Sum_probs=58.5
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
-++++|+=+|+ |.++..+++.+.. .+++|+++|.+++..+.+.+.. +........+..+. ... -..+|+|+
T Consensus 164 l~~~~V~ViGa--G~iG~~~a~~l~~--~Ga~V~~~d~~~~~~~~~~~~~---g~~~~~~~~~~~~l-~~~-~~~~DvVi 234 (369)
T 2eez_A 164 VAPASVVILGG--GTVGTNAAKIALG--MGAQVTILDVNHKRLQYLDDVF---GGRVITLTATEANI-KKS-VQHADLLI 234 (369)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHT---TTSEEEEECCHHHH-HHH-HHHCSEEE
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHhc---CceEEEecCCHHHH-HHH-HhCCCEEE
Confidence 35689999998 6777777777653 3569999999998776655422 32211111111111 111 13689999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.+.+...... ..-+.+...+.+++||+++.+.
T Consensus 235 ~~~g~~~~~~---------------------~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 235 GAVLVPGAKA---------------------PKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ECCC----------------------------CCSCHHHHTTSCTTCEEEECC
T ss_pred ECCCCCcccc---------------------chhHHHHHHHhhcCCCEEEEEe
Confidence 8766321000 0011344566789999887644
No 417
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=91.36 E-value=0.29 Score=41.44 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=54.5
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhc-CCCccEE
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRL-AGLVDVM 119 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~-~~~fD~I 119 (256)
.+|| +-.|+|.++..+.+.+... +++|+++|.+++..+.+++ .|.+ .++.. |+.+...... ...+|+|
T Consensus 166 ~~vl-i~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~-~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFV-MTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAA-HVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEE-ESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCS-EEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEE-EeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC-EEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 4555 5445555555455444322 5699999999988887764 3433 22222 2222222211 1369999
Q ss_pred EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+-+-. ...+..+.++|+++|+++++.
T Consensus 238 id~~g----------------------------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVT----------------------------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSC----------------------------HHHHHHHHHHSCTTCEEEECC
T ss_pred EECCC----------------------------ChhHHHHHhhhcCCCEEEEEe
Confidence 87421 122466778999999999864
No 418
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=91.30 E-value=1.6 Score=35.08 Aligned_cols=126 Identities=14% Similarity=0.070 Sum_probs=70.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEE-eCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIAT-DINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~gi-D~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|++. .++.++++.+.++ +++|+.+ +.+++..+.+.+.+...+....++..|+.+... ...
T Consensus 7 ~~k~vlVTGas~-GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGR-DIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567888888654 4677777777654 5688887 667776666666665555555788888765421 111
Q ss_pred CCCccEEEECCCCCCC-CCc-ccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPT-PED-EVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-+++|++|.|--.... ... +....+-...+... ..-.-.+.+.+.+.++++|+++.+.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN---~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVN---LTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHH---THHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 1579999988643211 110 10000000000000 0012344566677777788888765
No 419
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.98 E-value=2.2 Score=33.18 Aligned_cols=66 Identities=17% Similarity=0.051 Sum_probs=45.1
Q ss_pred ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEECC
Q 025211 51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVVNP 123 (256)
Q Consensus 51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~np 123 (256)
||.|.++..+++.|.+. +..|+++|.+++.++...+. . ...++.+|..+.. ....-..+|+|++..
T Consensus 6 iG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~---~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKK---L--KATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp ECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHH---S--SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred ECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHH---c--CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 34588888888887654 56899999999987764432 1 2368888876542 222235789999853
No 420
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.92 E-value=2.5 Score=34.24 Aligned_cols=83 Identities=20% Similarity=0.193 Sum_probs=59.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------h--hc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------K--RL 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~--~~ 112 (256)
.+++.+|=-|.+.| ++.++++.+.++ +++|+..|.+++.++.+.+.+...+.+...+..|+.+... . ..
T Consensus 7 L~gKvalVTGas~G-IG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSARG-LGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46788888886655 566777777654 6799999999999888877777777666777777655421 1 11
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-++.|++|.|--..
T Consensus 84 ~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 84 GIHVDILINNAGIQ 97 (255)
T ss_dssp TCCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 36899999987544
No 421
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=90.79 E-value=1.9 Score=35.22 Aligned_cols=81 Identities=21% Similarity=0.259 Sum_probs=55.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.+|.+++..+.+.+.+...+....++..|+.+... ... -
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788888865 45677777777654 6799999999988777766665444445778888765421 111 1
Q ss_pred CCccEEEECCCC
Q 025211 114 GLVDVMVVNPPY 125 (256)
Q Consensus 114 ~~fD~Ii~npP~ 125 (256)
+++|++|.|--+
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999998654
No 422
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.59 E-value=0.3 Score=41.42 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=51.1
Q ss_pred CCCCEEEEeccc--ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE--cchhhchhhhcCCCc
Q 025211 41 HHPVLCMEVGCG--SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN--TDIASGLEKRLAGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG--~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~f 116 (256)
+++.+||=.|++ .|..++.+++. ..+..|++++ +++..+.++ .+.+ .++. .|+.+.......+.+
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~----~g~~~V~~~~-~~~~~~~~~-----~ga~-~~~~~~~~~~~~~~~~~~~g~ 209 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCST----VPNVTVFGTA-STFKHEAIK-----DSVT-HLFDRNADYVQEVKRISAEGV 209 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTT----STTCEEEEEE-CGGGHHHHG-----GGSS-EEEETTSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH----cCCcEEEEeC-CHHHHHHHH-----cCCc-EEEcCCccHHHHHHHhcCCCc
Confidence 578999999984 34444333332 2356899998 544444433 3332 2222 223232223334579
Q ss_pred cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
|+|+-.-. ...+..+.++|+++|+++++.
T Consensus 210 Dvv~d~~g----------------------------~~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 210 DIVLDCLC----------------------------GDNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEEECC-----------------------------------CTTEEEEEEEEEEC
T ss_pred eEEEECCC----------------------------chhHHHHHHHhhcCCEEEEEC
Confidence 99986311 112366788999999999864
No 423
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=90.31 E-value=0.71 Score=39.19 Aligned_cols=99 Identities=9% Similarity=0.116 Sum_probs=54.1
Q ss_pred CCC-CEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE------cchhhchhhh
Q 025211 41 HHP-VLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN------TDIASGLEKR 111 (256)
Q Consensus 41 ~~~-~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~------~d~~~~~~~~ 111 (256)
+++ .+||=.|+ |.|..++.+++.+ +++++++.-+++..+..++.+...|.+ .++. .|+.+.....
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~-----Ga~vi~~~~~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL-----NFNSISVIRDRPNLDEVVASLKELGAT-QVITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH-----TCEEEEEECCCTTHHHHHHHHHHHTCS-EEEEHHHHHCGGGHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC-----CCEEEEEecCccccHHHHHHHHhcCCe-EEEecCccchHHHHHHHHHH
Confidence 467 89998886 3556666666653 457777765443211111222334543 2222 2222222221
Q ss_pred c---CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 112 L---AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 112 ~---~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
. ...+|+|+-.-. -.... .+.++|+++|+++.+.
T Consensus 239 t~~~~~g~Dvvid~~G---------------------------~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVG---------------------------GKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHTCCEEEEEESSC---------------------------HHHHH-HHHHTSCTTCEEEECC
T ss_pred hhccCCCceEEEECCC---------------------------chhHH-HHHHHhccCCEEEEec
Confidence 1 346999987421 12233 5678999999998854
No 424
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.09 E-value=3.1 Score=33.12 Aligned_cols=81 Identities=10% Similarity=0.072 Sum_probs=53.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcch--hhch--hhh-----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDI--ASGL--EKR----- 111 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~--~~~~--~~~----- 111 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++.+++..+.+.+.+...+- ...++..|+ .+.. ...
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 56788877754 55677778877654 67899999999888777666654332 346777777 3221 110
Q ss_pred -cCCCccEEEECCCC
Q 025211 112 -LAGLVDVMVVNPPY 125 (256)
Q Consensus 112 -~~~~fD~Ii~npP~ 125 (256)
.-+++|++|.|.-.
T Consensus 88 ~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHCSCCSEEEECCCC
T ss_pred HhCCCCCEEEECCcc
Confidence 12579999998654
No 425
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=90.05 E-value=3.7 Score=33.18 Aligned_cols=127 Identities=16% Similarity=0.078 Sum_probs=71.8
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-HHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc-----
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-PYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL----- 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~----- 112 (256)
-.+++||=.|++ |.++.++++.+.++ +++|+.++.+ ....+...+.+...+....++.+|+.+... ...
T Consensus 29 l~gk~~lVTGas-~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGS-RGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367888888866 45677777777654 6788888654 455666555665555555778888765421 110
Q ss_pred -CCCccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 -AGLVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 -~~~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-+++|++|.|--......... ...+....+... ..-...+++.+.+.++++|+++++.
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVN---FRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---THHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHH---hHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 147999999875443221110 000000000000 0012234566677788889888764
No 426
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.04 E-value=2.5 Score=33.38 Aligned_cols=82 Identities=15% Similarity=0.134 Sum_probs=58.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~ 113 (256)
.+++||=.|+ +|.++.++++.+.++ +++|++++.++...+...+.+...+....++..|+.+... .. ..
T Consensus 4 ~~k~vlITGa-s~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGA-SRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4577887774 566677788877754 6799999999988888777777666666788888765421 10 12
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|.-+.
T Consensus 81 ~~id~li~~Ag~~ 93 (247)
T 3lyl_A 81 LAIDILVNNAGIT 93 (247)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5789999987554
No 427
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=89.95 E-value=0.89 Score=36.98 Aligned_cols=70 Identities=14% Similarity=0.204 Sum_probs=38.0
Q ss_pred CCccEEEECC--CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC--HHHHHHHHHHc
Q 025211 114 GLVDVMVVNP--PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND--PSQICLQMMEK 189 (256)
Q Consensus 114 ~~fD~Ii~np--P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~ 189 (256)
++||+|++|. ||....-.+. ++....+.-+-....+.|+|||.+++...++-. .+.+...+. .
T Consensus 210 grYDlVfvNv~TpyR~HHYQQC------------eDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alA-R 276 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQC------------VDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLG-R 276 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHH------------HHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHH-T
T ss_pred CceeEEEEecCCccccchHHHH------------HHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHH-h
Confidence 7999999986 5532211110 000111223335678899999999997765432 233444443 3
Q ss_pred CCcEEEE
Q 025211 190 GYAARIV 196 (256)
Q Consensus 190 g~~~~~~ 196 (256)
.|....+
T Consensus 277 kF~~~rv 283 (324)
T 3trk_A 277 KFRSSRA 283 (324)
T ss_dssp TEEEEEE
T ss_pred hheeeee
Confidence 4554433
No 428
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.75 E-value=2.6 Score=34.25 Aligned_cols=82 Identities=26% Similarity=0.291 Sum_probs=55.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC----------------HHHHHHHHHHHHHcCCcceEEEcchh
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN----------------PYAVEVTRKTLEAHNVHADLINTDIA 105 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~----------------~~~i~~a~~~~~~~~~~~~~~~~d~~ 105 (256)
.+++||=.|++.| ++.++++.+.++ +++|+.+|.+ ++.++...+.+...+....++..|+.
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 5678888887655 566777777654 6789999987 66666666555555545577888876
Q ss_pred hchh--hhc------CCCccEEEECCCCC
Q 025211 106 SGLE--KRL------AGLVDVMVVNPPYV 126 (256)
Q Consensus 106 ~~~~--~~~------~~~fD~Ii~npP~~ 126 (256)
+... ... -+++|++|.|.-+.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 5421 111 15799999987554
No 429
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.70 E-value=0.34 Score=41.41 Aligned_cols=96 Identities=18% Similarity=0.086 Sum_probs=56.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++.+||=+|+ |.++..+++.+.. .+++|++++.+++..+.+++ ..|.+ .++..+-.+..... .+.+|+|+.
T Consensus 187 ~g~~VlV~Ga--G~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~---~lGa~-~v~~~~~~~~~~~~-~~~~D~vid 257 (366)
T 1yqd_A 187 PGKHIGIVGL--GGLGHVAVKFAKA--FGSKVTVISTSPSKKEEALK---NFGAD-SFLVSRDQEQMQAA-AGTLDGIID 257 (366)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHH--TTCEEEEEESCGGGHHHHHH---TSCCS-EEEETTCHHHHHHT-TTCEEEEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---hcCCc-eEEeccCHHHHHHh-hCCCCEEEE
Confidence 7889999986 4555555554432 25689999999887766553 23432 22221111112221 247999987
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+-.- ...++.+.+.|+++|+++.+.
T Consensus 258 ~~g~---------------------------~~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 258 TVSA---------------------------VHPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CCSS---------------------------CCCSHHHHHHEEEEEEEEECC
T ss_pred CCCc---------------------------HHHHHHHHHHHhcCCEEEEEc
Confidence 5321 011345567889999988754
No 430
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.52 E-value=3 Score=33.53 Aligned_cols=127 Identities=14% Similarity=0.087 Sum_probs=70.2
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC---HHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc---
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN---PYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL--- 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~---~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~--- 112 (256)
-.+++||=.|++. .++.++++.+.++ +++|+.++.+ .+..+.+.+.+...+....++..|+.+... ...
T Consensus 9 l~~k~vlVTGas~-GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 9 LKNKVIVIAGGIK-NLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CTTCEEEEETCSS-HHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 3567888888664 4677788888754 6789888654 444555555555445445778888765421 111
Q ss_pred ---CCCccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 ---AGLVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ---~~~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-+++|++|.|--......... ...+....+.. ...-.-.+.+.+.+.|+++|+++++.
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~---N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI---NNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH---HHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH---HhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 157999999875443221110 00000000000 00012234556667777889888765
No 431
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.40 E-value=0.42 Score=40.62 Aligned_cols=96 Identities=16% Similarity=0.053 Sum_probs=55.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++.+||=+|+| .++..+.+.+.. .+++|+++|.+++..+.+++ ..|.+ .++..+-.+..... .+.+|+|+-
T Consensus 180 ~g~~VlV~GaG--~vG~~a~qlak~--~Ga~Vi~~~~~~~~~~~~~~---~lGa~-~vi~~~~~~~~~~~-~~g~D~vid 250 (357)
T 2cf5_A 180 PGLRGGILGLG--GVGHMGVKIAKA--MGHHVTVISSSNKKREEALQ---DLGAD-DYVIGSDQAKMSEL-ADSLDYVID 250 (357)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHH--HTCEEEEEESSTTHHHHHHT---TSCCS-CEEETTCHHHHHHS-TTTEEEEEE
T ss_pred CCCEEEEECCC--HHHHHHHHHHHH--CCCeEEEEeCChHHHHHHHH---HcCCc-eeeccccHHHHHHh-cCCCCEEEE
Confidence 78999999864 444444443332 24689999999877766552 23433 23222111111121 246999987
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
.-.- ...+..+.++|+++|+++++.
T Consensus 251 ~~g~---------------------------~~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 251 TVPV---------------------------HHALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp CCCS---------------------------CCCSHHHHTTEEEEEEEEECS
T ss_pred CCCC---------------------------hHHHHHHHHHhccCCEEEEeC
Confidence 4221 012455667899999998754
No 432
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=89.14 E-value=2.8 Score=34.31 Aligned_cols=83 Identities=16% Similarity=0.138 Sum_probs=55.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHc--CCcceEEEcchhhchh--hhc----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAH--NVHADLINTDIASGLE--KRL---- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~--~~~~~~~~~d~~~~~~--~~~---- 112 (256)
.+++||=.|++ |.++.++++.+.+++. .+.|+.++.+++.++.+.+.+... +....++..|+.+... ...
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 56888888865 4556667776654322 348999999998888777766554 3344777888765431 111
Q ss_pred --CCCccEEEECCCC
Q 025211 113 --AGLVDVMVVNPPY 125 (256)
Q Consensus 113 --~~~fD~Ii~npP~ 125 (256)
-+++|++|.|--.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1479999998654
No 433
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=89.10 E-value=2.4 Score=34.27 Aligned_cols=82 Identities=16% Similarity=0.141 Sum_probs=56.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh-------c
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR-------L 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~-------~ 112 (256)
.+++||=.|+ +|.++.++++.+.++ +++|++++.+++.++.+.+.+...+....++..|+.+... .. .
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678888885 566677788877654 5789999999887776666555545455777888765421 11 1
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
.+.+|++|.|--..
T Consensus 97 ~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 97 DGKLNILVNNAGVV 110 (273)
T ss_dssp TSCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 26899999986543
No 434
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.09 E-value=2.3 Score=34.01 Aligned_cols=82 Identities=15% Similarity=0.134 Sum_probs=55.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc-------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------- 112 (256)
.+++||=.|+ +|.++.++++.|.++ +++|++++.+++..+.+.+.+...+....++.+|+.+... ...
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4677887775 566677788877654 5789999999887776655555444444777888765421 111
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
.+.+|++|.|--..
T Consensus 85 ~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 85 HGKLNILVNNAGIV 98 (260)
T ss_dssp TTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 16799999986543
No 435
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=89.03 E-value=3.3 Score=33.43 Aligned_cols=83 Identities=23% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC-------------CHHHHHHHHHHHHHcCCcceEEEcchhhch
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-------------NPYAVEVTRKTLEAHNVHADLINTDIASGL 108 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-------------~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~ 108 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.+|. +++.++...+.+...+....++..|+.+..
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 56788877865 45566777777654 678999998 677776666666555555577788876542
Q ss_pred h--hhc------CCCccEEEECCCCCC
Q 025211 109 E--KRL------AGLVDVMVVNPPYVP 127 (256)
Q Consensus 109 ~--~~~------~~~fD~Ii~npP~~~ 127 (256)
. ... -+++|++|.|--...
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 111 157999999875543
No 436
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=89.00 E-value=5.8 Score=32.44 Aligned_cols=82 Identities=22% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC------------HHHHHHHHHHHHHcCCcceEEEcchhhchh
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN------------PYAVEVTRKTLEAHNVHADLINTDIASGLE 109 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~------------~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~ 109 (256)
.+++||=.|++.| ++.++++.+.++ +++|+++|.+ ++.++.+.+.+...+....++..|+.+...
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 5678888887654 567777777654 6799999987 666666666666656555788888765421
Q ss_pred --hhc------CCCccEEEECCCCC
Q 025211 110 --KRL------AGLVDVMVVNPPYV 126 (256)
Q Consensus 110 --~~~------~~~fD~Ii~npP~~ 126 (256)
... -+++|++|.|--..
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 111 15799999986543
No 437
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=88.90 E-value=3.7 Score=33.12 Aligned_cols=126 Identities=17% Similarity=0.117 Sum_probs=69.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEe-CCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATD-INPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD-~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.++++|=.|++. .++.++++.+.++ +++|+.++ .++...+...+.+...+....++..|+.+... ...
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASR-GIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSS-HHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467788777654 5566777776654 56787774 45666666666666555555777888765421 111
Q ss_pred CCCccEEEECCCCCCCCCcccc-cccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPTPEDEVG-REGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-+++|++|.|--.......... ...-...+.. ...-...+++.+.+.++++|+++.+.
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v---N~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAV---NLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHH---HHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH---HHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 1579999998755432221100 0000000000 00011234556677778889888765
No 438
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=88.52 E-value=2.9 Score=33.41 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh---c
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR---L 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~---~ 112 (256)
.+++||=.|+ +|.++.++++.+.++ +++|+.++.+++..+.+.+.+...+....++..|+.+... .. .
T Consensus 4 ~~k~vlVTGa-s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 4 NGQVCVVTGA-SRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4567777774 566778888887754 5789999999887776666555444444677888765421 11 0
Q ss_pred CCCccEEEECC
Q 025211 113 AGLVDVMVVNP 123 (256)
Q Consensus 113 ~~~fD~Ii~np 123 (256)
.+++|++|.|-
T Consensus 81 ~g~id~lvnnA 91 (260)
T 2qq5_A 81 QGRLDVLVNNA 91 (260)
T ss_dssp TTCCCEEEECC
T ss_pred CCCceEEEECC
Confidence 35789999986
No 439
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=88.45 E-value=6.4 Score=31.22 Aligned_cols=82 Identities=15% Similarity=0.189 Sum_probs=55.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--C-CcceEEEcchhhchh--hhc----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--N-VHADLINTDIASGLE--KRL---- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~-~~~~~~~~d~~~~~~--~~~---- 112 (256)
.++++|=.|++ |.++.++++.+.++ +++|+.++.+++..+.+.+.+... + ....++..|+.+... ...
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 56778877765 45566777777654 569999999998888777766554 2 233778888765421 110
Q ss_pred --CCCccEEEECCCCC
Q 025211 113 --AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 --~~~fD~Ii~npP~~ 126 (256)
-+++|++|.|.-..
T Consensus 83 ~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHCCEEEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 15799999987553
No 440
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.43 E-value=0.62 Score=41.63 Aligned_cols=90 Identities=16% Similarity=0.142 Sum_probs=57.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV 120 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii 120 (256)
..+++|+=+|+ |.++..+++.+.. .+++|+++|.++...+.+++ .|.. + .++.+.. ...|+|+
T Consensus 272 l~GktV~IiG~--G~IG~~~A~~lka--~Ga~Viv~d~~~~~~~~A~~----~Ga~--~--~~l~e~l-----~~aDvVi 334 (494)
T 3ce6_A 272 IGGKKVLICGY--GDVGKGCAEAMKG--QGARVSVTEIDPINALQAMM----EGFD--V--VTVEEAI-----GDADIVV 334 (494)
T ss_dssp CTTCEEEEECC--SHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH----TTCE--E--CCHHHHG-----GGCSEEE
T ss_pred CCcCEEEEEcc--CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH----cCCE--E--ecHHHHH-----hCCCEEE
Confidence 47899999987 5677767776653 35699999999987766543 3432 2 2333321 3689999
Q ss_pred ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHH-HHHhhccccCeEEEEEEe
Q 025211 121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKIL-PSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~ 174 (256)
...+-. .++ ....+.+|+||+++.+..
T Consensus 335 ~atgt~---------------------------~~i~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 335 TATGNK---------------------------DIIMLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp ECSSSS---------------------------CSBCHHHHHHSCTTCEEEECSS
T ss_pred ECCCCH---------------------------HHHHHHHHHhcCCCcEEEEeCC
Confidence 853210 111 234556899999987543
No 441
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.34 E-value=7.8 Score=30.36 Aligned_cols=82 Identities=10% Similarity=0.124 Sum_probs=54.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcch--hhch------hhh-
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDI--ASGL------EKR- 111 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~--~~~~------~~~- 111 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++.++...+.+.+.+...+. ...++..|+ .+.. ...
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 56788877765 66677788877654 56899999999988887777766553 336666665 2211 110
Q ss_pred -cCCCccEEEECCCCC
Q 025211 112 -LAGLVDVMVVNPPYV 126 (256)
Q Consensus 112 -~~~~fD~Ii~npP~~ 126 (256)
.-+++|++|.|.-+.
T Consensus 90 ~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 90 HEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HhCCCCCEEEECCccC
Confidence 014799999987653
No 442
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.24 E-value=2.6 Score=34.10 Aligned_cols=81 Identities=14% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------c
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------L 112 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~ 112 (256)
-+++.+|=-|.+.| ++.++++.+.++ +++|+.+|.+++.++.+.+.+...+.+..++..|+.+... .. .
T Consensus 5 L~gKvalVTGas~G-IG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSG-IGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46888888886665 466677776643 6799999999999988888888777666788888765421 00 1
Q ss_pred CCCccEEEECCC
Q 025211 113 AGLVDVMVVNPP 124 (256)
Q Consensus 113 ~~~fD~Ii~npP 124 (256)
-++.|+++.|--
T Consensus 82 ~G~iDiLVNNAG 93 (254)
T 4fn4_A 82 YSRIDVLCNNAG 93 (254)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 268999999864
No 443
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=88.16 E-value=1.3 Score=35.78 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=51.1
Q ss_pred CCCEEEEecc-cccHHHHHHHHHhcccCCCceEEEEeCCHHH-HHHHHHHHHHcCCcceEEEcchhhchh--hhc-----
Q 025211 42 HPVLCMEVGC-GSGYVITSLALMLGQEVPGVQYIATDINPYA-VEVTRKTLEAHNVHADLINTDIASGLE--KRL----- 112 (256)
Q Consensus 42 ~~~~VLDlGc-G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~-i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~----- 112 (256)
.+++||=.|+ |+|.++.++++.+.++ +++|+.++.++.. .+...+ ..+....++..|+.+... ...
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITD---RLPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHT---TSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHHHHHHHH---hcCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 4678898898 4788888888888754 5789999987653 232222 222233677788765421 111
Q ss_pred -CC---CccEEEECCCC
Q 025211 113 -AG---LVDVMVVNPPY 125 (256)
Q Consensus 113 -~~---~fD~Ii~npP~ 125 (256)
-+ ++|++|.|--.
T Consensus 81 ~~g~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGF 97 (269)
T ss_dssp HHCTTCCEEEEEECCCC
T ss_pred HhCCCCCceEEEECCcc
Confidence 13 79999998654
No 444
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=88.16 E-value=1.1 Score=38.11 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=42.9
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc--hhhchhhhcCC-Ccc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD--IASGLEKRLAG-LVD 117 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d--~~~~~~~~~~~-~fD 117 (256)
+++.+||=.|+| .++..+.+.+.. .++++|+++|.+++..+.+++ .|.+ .++..+ +.+.......+ .+|
T Consensus 185 ~~g~~VlV~GaG--~vG~~avqlak~-~~Ga~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~v~~~~~g~g~D 256 (359)
T 1h2b_A 185 YPGAYVAIVGVG--GLGHIAVQLLKV-MTPATVIALDVKEEKLKLAER----LGAD-HVVDARRDPVKQVMELTRGRGVN 256 (359)
T ss_dssp CTTCEEEEECCS--HHHHHHHHHHHH-HCCCEEEEEESSHHHHHHHHH----TTCS-EEEETTSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCC--HHHHHHHHHHHH-cCCCeEEEEeCCHHHHHHHHH----hCCC-EEEeccchHHHHHHHHhCCCCCc
Confidence 578999999984 344444443322 225689999999988887753 3433 222211 11222222223 699
Q ss_pred EEEEC
Q 025211 118 VMVVN 122 (256)
Q Consensus 118 ~Ii~n 122 (256)
+|+-.
T Consensus 257 vvid~ 261 (359)
T 1h2b_A 257 VAMDF 261 (359)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99874
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.14 E-value=2.2 Score=36.56 Aligned_cols=44 Identities=18% Similarity=0.137 Sum_probs=33.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK 88 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~ 88 (256)
-++++|+=+|+ |.++..+++.+.. -+++|+++|.+++..+.+++
T Consensus 166 l~g~~V~ViG~--G~iG~~~a~~a~~--~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 166 VEPADVVVIGA--GTAGYNAARIANG--MGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHH
Confidence 36789999997 6677777776653 35699999999988776654
No 446
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.10 E-value=10 Score=31.31 Aligned_cols=92 Identities=17% Similarity=0.093 Sum_probs=54.4
Q ss_pred CCCCEEEEec-cc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccE
Q 025211 41 HHPVLCMEVG-CG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlG-cG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~ 118 (256)
+++.+||=.| +| .|..++.+++. .+++|++++ +++..+.+++ .|.+ .++..+-.+.... .-..+|+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~-----~Ga~vi~~~-~~~~~~~~~~----lGa~-~~i~~~~~~~~~~-~~~g~D~ 218 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQ-----KGTTVITTA-SKRNHAFLKA----LGAE-QCINYHEEDFLLA-ISTPVDA 218 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEE-CHHHHHHHHH----HTCS-EEEETTTSCHHHH-CCSCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH-----cCCEEEEEe-ccchHHHHHH----cCCC-EEEeCCCcchhhh-hccCCCE
Confidence 5789999886 33 46666666554 256899987 4544555543 4543 2332221110111 1146999
Q ss_pred EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
|+-.-. -.. +..+.++|+++|+++.+
T Consensus 219 v~d~~g---------------------------~~~-~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 219 VIDLVG---------------------------GDV-GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEESSC---------------------------HHH-HHHHGGGEEEEEEEEEC
T ss_pred EEECCC---------------------------cHH-HHHHHHhccCCCEEEEe
Confidence 987421 122 37788999999999974
No 447
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=88.07 E-value=5.1 Score=32.43 Aligned_cols=126 Identities=17% Similarity=0.174 Sum_probs=68.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH-HHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY-AVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~-~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|+ +|.++.++++.+.++ +++|++++.++. ..+.+.+.+...+....++..|+.+... ...
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4677877776 456777788887754 678999988754 3444444454445445677788754321 100
Q ss_pred CCCccEEEECCCCCCCCCcc-cccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 113 AGLVDVMVVNPPYVPTPEDE-VGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 113 ~~~fD~Ii~npP~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
-+.+|++|.|--+....... ....+....+... ..-...+++.+.+.|+.+|+++++.
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N---~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN---TRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---THHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHh---hHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 14789999986543221110 0000000000000 0012234456666667778888765
No 448
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=88.03 E-value=4 Score=32.91 Aligned_cols=82 Identities=15% Similarity=0.108 Sum_probs=50.7
Q ss_pred CCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------c
Q 025211 42 HPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------L 112 (256)
Q Consensus 42 ~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~ 112 (256)
.+++||=.|++ +|.++.++++.+.++ +++|+.++.++...+.+++.....+ ...++..|+.+... .. .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888886 477888888888754 5789999988752222222212222 23677778765421 11 1
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-+++|++|.|--..
T Consensus 82 ~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 82 LGSLDFIVHSVAFA 95 (275)
T ss_dssp TSCEEEEEECCCCC
T ss_pred cCCCCEEEECCccC
Confidence 25789999986543
No 449
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.00 E-value=4 Score=27.72 Aligned_cols=74 Identities=18% Similarity=0.179 Sum_probs=48.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~I 119 (256)
...+|+=+|+ |.++..++..+.+.+ ...|+++|.++...+.+. .....+...|+.+.. ... -..+|+|
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g-~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~-~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSS-NYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKA-LGGFDAV 73 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCS-SEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHH-TTTCSEE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHH-HcCCCEE
Confidence 3568888888 777777777766542 268999999988766544 122356666765431 121 2468999
Q ss_pred EECCCC
Q 025211 120 VVNPPY 125 (256)
Q Consensus 120 i~npP~ 125 (256)
+...|+
T Consensus 74 i~~~~~ 79 (118)
T 3ic5_A 74 ISAAPF 79 (118)
T ss_dssp EECSCG
T ss_pred EECCCc
Confidence 987664
No 450
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.95 E-value=4.5 Score=32.65 Aligned_cols=82 Identities=24% Similarity=0.261 Sum_probs=55.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC-------------CHHHHHHHHHHHHHcCCcceEEEcchhhch
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-------------NPYAVEVTRKTLEAHNVHADLINTDIASGL 108 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-------------~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~ 108 (256)
.+++||=.|++. .++.++++.+.++ +++|+++|. +++.++.+.+.+...+....++..|+.+..
T Consensus 14 ~gk~~lVTGas~-gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAAR-GQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 567888777664 5567777777654 679999997 677777766666655555577888876542
Q ss_pred h--hhc------CCCccEEEECCCCC
Q 025211 109 E--KRL------AGLVDVMVVNPPYV 126 (256)
Q Consensus 109 ~--~~~------~~~fD~Ii~npP~~ 126 (256)
. ... -+++|++|.|--..
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 111 15799999987554
No 451
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.94 E-value=1.4 Score=39.01 Aligned_cols=69 Identities=17% Similarity=0.095 Sum_probs=48.9
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEE
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVV 121 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~ 121 (256)
.+|+= ||.|.++..+++.|..+ +..|+.+|.+++.++.+.+.+ +..++.+|..+.. ....-+..|++++
T Consensus 4 M~iiI--~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIII--LGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEE--ECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEE--ECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 34544 45567777889988643 568999999999988776543 3478889987652 2323467999988
No 452
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=87.74 E-value=4.9 Score=32.26 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=54.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEE-eCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIAT-DINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~gi-D~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|+ +|.++.++++.+.++ +++|+.+ +.+++..+...+.+...+....++..|+.+... ...
T Consensus 25 ~~k~vlITGa-s~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 25 DTPVVLVTGG-SRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CSCEEEETTT-TSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4567777775 556677788877654 5678666 677777777766666655555788888765421 110
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-+.+|++|.|.-+.
T Consensus 102 ~g~id~li~nAg~~ 115 (272)
T 4e3z_A 102 FGRLDGLVNNAGIV 115 (272)
T ss_dssp HSCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 14789999987554
No 453
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.60 E-value=1.3 Score=37.68 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=55.2
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhcCCC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRLAGL 115 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~ 115 (256)
+++.+||=.|+ |.|..++.+++. .+++|++++ +++..+.++ ..|.+ .++.. ++.+.... ...
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~-----~Ga~Vi~~~-~~~~~~~~~----~lGa~-~v~~~~~~~~~~~~~~--~~g 248 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKA-----WDAHVTAVC-SQDASELVR----KLGAD-DVIDYKSGSVEEQLKS--LKP 248 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEE-CGGGHHHHH----HTTCS-EEEETTSSCHHHHHHT--SCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEe-ChHHHHHHH----HcCCC-EEEECCchHHHHHHhh--cCC
Confidence 57889999983 345555555554 246899998 666555553 34433 22221 22222211 246
Q ss_pred ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+|+|+-+-. + ....+....+.|+++|+++.+.
T Consensus 249 ~D~vid~~g--------------------~------~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 249 FDFILDNVG--------------------G------STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp BSEEEESSC--------------------T------THHHHGGGGBCSSSCCEEEESC
T ss_pred CCEEEECCC--------------------C------hhhhhHHHHHhhcCCcEEEEeC
Confidence 999987421 0 0123567778999999998743
No 454
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.59 E-value=6.4 Score=32.86 Aligned_cols=99 Identities=19% Similarity=0.186 Sum_probs=59.8
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH-------cCC-cc---------eE-EEcchh
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA-------HNV-HA---------DL-INTDIA 105 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~-------~~~-~~---------~~-~~~d~~ 105 (256)
.+|-=||+| .++..++..+.+. +..|++.|.+++.++.+.+.+.. .|. +. .+ ...|..
T Consensus 7 ~kI~vIGaG--~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSG--LVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred ceEEEEeeC--HHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 456666664 5555555555433 56899999999999888765432 121 10 11 122332
Q ss_pred hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211 106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT 173 (256)
Q Consensus 106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (256)
+. -...|+|+..-|- ..+....++.++...++++-+++-++
T Consensus 83 ea-----v~~aDlVieavpe----------------------~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 83 EA-----VEGVVHIQECVPE----------------------NLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp HH-----TTTEEEEEECCCS----------------------CHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred HH-----HhcCCEEEEeccC----------------------CHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 22 1468999986551 12345677888888899888666433
No 455
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.57 E-value=6.5 Score=34.85 Aligned_cols=131 Identities=11% Similarity=0.113 Sum_probs=65.6
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH---HcCC--------cceE-EEcchhhchhhh
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE---AHNV--------HADL-INTDIASGLEKR 111 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~---~~~~--------~~~~-~~~d~~~~~~~~ 111 (256)
.+|.=+|+|. ++..++..+.+.+++..|+++|.+++.++..++... ..++ ...+ ...|..+..
T Consensus 10 mkI~VIG~G~--vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~--- 84 (481)
T 2o3j_A 10 SKVVCVGAGY--VGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAI--- 84 (481)
T ss_dssp CEEEEECCST--THHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH---
T ss_pred CEEEEECCCH--HHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHh---
Confidence 4677777653 444455555544556789999999998876543100 0000 0011 112222211
Q ss_pred cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE-EeCCCCHHHHHHHHHH-c
Q 025211 112 LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV-TLTANDPSQICLQMME-K 189 (256)
Q Consensus 112 ~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~~~~-~ 189 (256)
...|+|+..-|-....+...... ..........++.+.+.|++|..++.. +......+.+.+.+.+ .
T Consensus 85 --~~aDvvii~Vptp~~~~g~~~~~---------~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~ 153 (481)
T 2o3j_A 85 --AEADLIFISVNTPTKMYGRGKGM---------APDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQ 153 (481)
T ss_dssp --HHCSEEEECCCCCBCCSSTTTTT---------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHT
T ss_pred --hcCCEEEEecCCccccccccccC---------CCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhh
Confidence 24799998644221100000000 011223566778888889887766542 2222334556666766 4
Q ss_pred C
Q 025211 190 G 190 (256)
Q Consensus 190 g 190 (256)
+
T Consensus 154 ~ 154 (481)
T 2o3j_A 154 K 154 (481)
T ss_dssp C
T ss_pred C
Confidence 4
No 456
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.44 E-value=5.3 Score=28.99 Aligned_cols=73 Identities=15% Similarity=0.102 Sum_probs=45.3
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-HHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEE
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-PYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMV 120 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii 120 (256)
.+|+=+| .|.++..+++.|.+. +..|+++|.+ ++..+...... .....++.+|..+.. ....-...|+|+
T Consensus 4 ~~vlI~G--~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCG--HSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEEC--CSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEEC--CCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 4566565 488888888887653 4689999997 45444433321 112378888876442 221235789999
Q ss_pred ECC
Q 025211 121 VNP 123 (256)
Q Consensus 121 ~np 123 (256)
+..
T Consensus 77 ~~~ 79 (153)
T 1id1_A 77 ALS 79 (153)
T ss_dssp ECS
T ss_pred Eec
Confidence 853
No 457
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=87.31 E-value=3.5 Score=32.93 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=50.7
Q ss_pred CCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|++ +|.++.++++.+.++ +++|+.++.++...+.+++.....+ ...++..|+.+... ...
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 46788888886 377788888887655 5689999988752222222222222 13677788765421 111
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-+.+|++|.|.-..
T Consensus 84 ~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 84 FGGLDYLVHAIAFA 97 (261)
T ss_dssp HSSEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14789999986543
No 458
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.07 E-value=8.1 Score=31.92 Aligned_cols=82 Identities=18% Similarity=0.207 Sum_probs=54.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC------------HHHHHHHHHHHHHcCCcceEEEcchhhchh
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN------------PYAVEVTRKTLEAHNVHADLINTDIASGLE 109 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~------------~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~ 109 (256)
.+++||=.|++ |.++.++++.+.++ +++|+++|.+ ++.++...+.+...+....++..|+.+...
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 56788877765 45567777777654 6789999876 666666666665556555788888765421
Q ss_pred --hhc------CCCccEEEECCCCC
Q 025211 110 --KRL------AGLVDVMVVNPPYV 126 (256)
Q Consensus 110 --~~~------~~~fD~Ii~npP~~ 126 (256)
... -+++|++|.|--+.
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111 15799999986543
No 459
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=86.99 E-value=5.9 Score=30.87 Aligned_cols=81 Identities=19% Similarity=0.133 Sum_probs=55.1
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH-HcCCcceEEEcchhhchh--hhcC------
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE-AHNVHADLINTDIASGLE--KRLA------ 113 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~-~~~~~~~~~~~d~~~~~~--~~~~------ 113 (256)
+++||=.|+ +|.++.++++.+.++ +++|+.++.+++..+.+.+.+. ..+....++..|+.+... ...+
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 456776775 456777788887754 5689999999888776666554 445555788888865431 1111
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|.-..
T Consensus 79 g~id~li~~Ag~~ 91 (235)
T 3l77_A 79 GDVDVVVANAGLG 91 (235)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999987543
No 460
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=86.93 E-value=6.6 Score=31.80 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=52.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.+|.+++..+.+.+.+ +....++..|+.+... ... -
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADE--GCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788877765 44566677776654 679999999988776655443 4444777888765421 100 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|--..
T Consensus 102 g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 102 GGVDKLVANAGVV 114 (277)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5799999986544
No 461
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.93 E-value=7.5 Score=30.91 Aligned_cols=79 Identities=16% Similarity=0.146 Sum_probs=52.8
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~ 113 (256)
.+++||=.|+ +|.++.++++.+.++ +++|+.+|.+++..+...+.+ +....++..|+.+... .. .-
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 5678887785 466677788877654 678999999988766554433 3334777888765421 11 12
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+.+|++|.|--..
T Consensus 81 g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 81 GGLDILVNNAALF 93 (259)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4799999987554
No 462
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.93 E-value=5.8 Score=34.99 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=64.8
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH------------HHHcCCcceE-EEcchhhchhh
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT------------LEAHNVHADL-INTDIASGLEK 110 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~------------~~~~~~~~~~-~~~d~~~~~~~ 110 (256)
.+|.=+|+| .++..++..+.+.+++..|+++|.+++.++..++. +.... ...+ ...|..+..
T Consensus 6 mkI~VIG~G--~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~-~~~~~~t~~~~e~~-- 80 (467)
T 2q3e_A 6 KKICCIGAG--YVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCR-GKNLFFSTNIDDAI-- 80 (467)
T ss_dssp CEEEEECCS--TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHB-TTTEEEESCHHHHH--
T ss_pred cEEEEECCC--HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhh-cCCEEEECCHHHHH--
Confidence 467767665 44444566555444466899999999887764321 11100 0011 122322221
Q ss_pred hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE-eCCCCHHHHHHHHHHc
Q 025211 111 RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT-LTANDPSQICLQMMEK 189 (256)
Q Consensus 111 ~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~~~~ 189 (256)
...|+|+..-|-...... ...+...........++.+...|++|..++..+ ......+.+.+.+.+.
T Consensus 81 ---~~aDvViiaVptp~~~~~---------v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~ 148 (467)
T 2q3e_A 81 ---KEADLVFISVNTPTKTYG---------MGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDAN 148 (467)
T ss_dssp ---HHCSEEEECCCCCBCCSS---------TTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHT
T ss_pred ---hcCCEEEEEcCCchhhcc---------ccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHh
Confidence 247999986542111100 000001122335667777888888876654421 1222334566666665
Q ss_pred C
Q 025211 190 G 190 (256)
Q Consensus 190 g 190 (256)
+
T Consensus 149 ~ 149 (467)
T 2q3e_A 149 T 149 (467)
T ss_dssp C
T ss_pred C
Confidence 3
No 463
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=86.92 E-value=2.2 Score=34.77 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=55.2
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.+|.+++.++.+.+.+...+....++..|+.+... ... -
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56778877765 55677777777654 6789999999988877766665444444677778765421 111 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|--..
T Consensus 84 g~iD~lvnnAg~~ 96 (280)
T 3tox_A 84 GGLDTAFNNAGAL 96 (280)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5799999986543
No 464
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.92 E-value=6.5 Score=31.95 Aligned_cols=111 Identities=18% Similarity=0.190 Sum_probs=64.9
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc---------CCcc--------e-EEEcchh
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH---------NVHA--------D-LINTDIA 105 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~---------~~~~--------~-~~~~d~~ 105 (256)
++|.=+|+ |.++..++..+.+. +..|+.+|.+++.++.+.+.+... ++.. . ....|..
T Consensus 5 ~kV~VIGa--G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGT--GVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CEEEEECC--CHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 45666665 55666667666543 568999999999988887764321 1110 0 1122332
Q ss_pred hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHH
Q 025211 106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQ 185 (256)
Q Consensus 106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 185 (256)
+. -...|+||..-|- ..+....+++++...++++.+++-.+.+. ...++.+.
T Consensus 81 ~~-----~~~aDlVi~av~~----------------------~~~~~~~v~~~l~~~~~~~~il~s~tS~~-~~~~la~~ 132 (283)
T 4e12_A 81 QA-----VKDADLVIEAVPE----------------------SLDLKRDIYTKLGELAPAKTIFATNSSTL-LPSDLVGY 132 (283)
T ss_dssp HH-----TTTCSEEEECCCS----------------------CHHHHHHHHHHHHHHSCTTCEEEECCSSS-CHHHHHHH
T ss_pred HH-----hccCCEEEEeccC----------------------cHHHHHHHHHHHHhhCCCCcEEEECCCCC-CHHHHHhh
Confidence 22 1468999986541 12345677888888899888765433322 34444444
Q ss_pred H
Q 025211 186 M 186 (256)
Q Consensus 186 ~ 186 (256)
+
T Consensus 133 ~ 133 (283)
T 4e12_A 133 T 133 (283)
T ss_dssp H
T ss_pred c
Confidence 4
No 465
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.79 E-value=4.6 Score=33.59 Aligned_cols=93 Identities=20% Similarity=0.138 Sum_probs=57.2
Q ss_pred CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh-chhhhcCCCccEEEE
Q 025211 43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS-GLEKRLAGLVDVMVV 121 (256)
Q Consensus 43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~fD~Ii~ 121 (256)
..+|.=||+ |.++-.++..+.+.+....|+++|.+++.++.+.+ .|.. .-...|..+ .. ...|+|+.
T Consensus 33 ~~kI~IIG~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~-~~~~~~~~~~~~-----~~aDvVil 100 (314)
T 3ggo_A 33 MQNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGII-DEGTTSIAKVED-----FSPDFVML 100 (314)
T ss_dssp CSEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSC-SEEESCTTGGGG-----GCCSEEEE
T ss_pred CCEEEEEee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCc-chhcCCHHHHhh-----ccCCEEEE
Confidence 367887875 55665666666544333389999999988776653 2322 112233333 21 35799997
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
.-|-. ....+++++...|+++.+++-
T Consensus 101 avp~~------------------------~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 101 SSPVR------------------------TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp CSCGG------------------------GHHHHHHHHHHHSCTTCEEEE
T ss_pred eCCHH------------------------HHHHHHHHHhhccCCCcEEEE
Confidence 54410 145677888888998876654
No 466
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=86.66 E-value=6.1 Score=32.01 Aligned_cols=81 Identities=20% Similarity=0.202 Sum_probs=52.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH-HHHHHHHHHHH-HcCCcceEEEcchhh----ch--hhhc-
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP-YAVEVTRKTLE-AHNVHADLINTDIAS----GL--EKRL- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~-~~i~~a~~~~~-~~~~~~~~~~~d~~~----~~--~~~~- 112 (256)
.+++||=.|++ |.++.++++.|.++ +++|+.++.++ +..+.+.+.+. ..+....++..|+.+ .. ....
T Consensus 22 ~~k~~lVTGas-~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAA-KRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 45777777755 56677777777654 56899999887 66655555554 334344777888776 21 1111
Q ss_pred -----CCCccEEEECCCC
Q 025211 113 -----AGLVDVMVVNPPY 125 (256)
Q Consensus 113 -----~~~fD~Ii~npP~ 125 (256)
-+++|++|.|--.
T Consensus 99 ~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 1479999998654
No 467
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=86.66 E-value=4.1 Score=32.39 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=53.1
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------CCC
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------AGL 115 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~~~ 115 (256)
++||=.|+ +|.++.++++.+.++ +++|++++.+++..+...+.+...+....++..|+.+... ... -+.
T Consensus 3 k~vlVTGa-s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTGA-GQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECC-CChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 56676664 566777788877654 5789999999887776666555444445677788765421 111 147
Q ss_pred ccEEEECCCC
Q 025211 116 VDVMVVNPPY 125 (256)
Q Consensus 116 fD~Ii~npP~ 125 (256)
+|++|.|--+
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998654
No 468
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.63 E-value=3.3 Score=33.74 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=56.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-cceEEEcchhhc-h--hhhc-----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-HADLINTDIASG-L--EKRL----- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-~~~~~~~d~~~~-~--~~~~----- 112 (256)
.+++||=.|++ |.++.++++.|.++ +++|++++.++...+.+.+.+...+- ...++..|+.+. . ....
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 46778877765 56777788887654 67999999999887777666654432 347888888765 1 1111
Q ss_pred -CCCccEEEECCCCC
Q 025211 113 -AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 -~~~fD~Ii~npP~~ 126 (256)
-+++|++|.|--..
T Consensus 88 ~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 88 HFGKLDILVNNAGVA 102 (311)
T ss_dssp HHSSCCEEEECCCCC
T ss_pred hCCCCCEEEECCccc
Confidence 15799999987554
No 469
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=86.13 E-value=3.4 Score=33.76 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=55.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH-----cCCcceEEEcchhhchh--hhcC-
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA-----HNVHADLINTDIASGLE--KRLA- 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~-----~~~~~~~~~~d~~~~~~--~~~~- 113 (256)
.+++||=.|+ +|.++.++++.+.++ +++|++++.++...+.+.+.+.. .+....++.+|+.+... ...+
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 4678887775 577788888887654 56899999998877766666554 23334778888765421 1111
Q ss_pred -----CCccEEEECCCC
Q 025211 114 -----GLVDVMVVNPPY 125 (256)
Q Consensus 114 -----~~fD~Ii~npP~ 125 (256)
+++|++|.|--.
T Consensus 94 ~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 469999998653
No 470
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=86.10 E-value=4.7 Score=32.28 Aligned_cols=80 Identities=14% Similarity=0.205 Sum_probs=51.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|+ +|.++..+++.+.++ +++|++++.++...+...+.+...+ ...++.+|+.+... ... -
T Consensus 15 ~~k~vlITGa-sggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 15 QDKVAIITGG-AGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECC-CCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhCCCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678887775 567788888877654 5689999998876554433331111 33778888765421 111 1
Q ss_pred CCccEEEECCCC
Q 025211 114 GLVDVMVVNPPY 125 (256)
Q Consensus 114 ~~fD~Ii~npP~ 125 (256)
+.+|++|.|.-.
T Consensus 91 ~~id~li~~Ag~ 102 (278)
T 2bgk_A 91 GKLDIMFGNVGV 102 (278)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 479999987644
No 471
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=86.06 E-value=5.4 Score=32.74 Aligned_cols=97 Identities=11% Similarity=0.141 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCcceEE--EcchhhchhhhcCCCccEEEECCCCCCCCCccc--ccccchhhhcCCCCcHHHHHHH
Q 025211 80 PYAVEVTRKTLEAHNVHADLI--NTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEV--GREGIASAWAGGENGRAVIDKI 155 (256)
Q Consensus 80 ~~~i~~a~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++.+..+.+.++ ...+. +.|+.+.+... ..=|+|.++|||...+.... .+. ....+.+...++
T Consensus 156 ~~~l~~~~~~l~----~v~i~~~~~Df~~~i~~~--~~~~fvY~DPPY~~~~~~~~f~~Y~-------~~~f~~~dh~~L 222 (284)
T 2dpm_A 156 EELISAISVYIN----NNQLEIKVGDFEKAIVDV--RTGDFVYFDPPYIPLSETSAFTSYT-------HEGFSFADQVRL 222 (284)
T ss_dssp HHHHHHHHHHHH----HSEEEEEESCGGGGGTTC--CTTCEEEECCCCCCC-----CCCCC-------CSSCCHHHHHHH
T ss_pred HHHHHHHHHHhC----CCEEEEeCCCHHHHHHhc--CCCCEEEeCCCcccccCCCCccccc-------cCCCCHHHHHHH
Confidence 344554444443 23666 99999987653 33489999999987433211 010 011233445666
Q ss_pred HHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEE
Q 025211 156 LPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAAR 194 (256)
Q Consensus 156 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (256)
.+.+.++=+.||.++++.. . ...+.+++. +|...
T Consensus 223 ~~~l~~l~~~g~~~~lS~~-d--~~~i~~ly~--~~~i~ 256 (284)
T 2dpm_A 223 RDAFKRLSDTGAYVMLSNS-S--SALVEELYK--DFNIH 256 (284)
T ss_dssp HHHHHHHHTTTCEEEEEEE-S--CHHHHHHTT--TSEEE
T ss_pred HHHHHHHHhcCCEEEEEcC-C--CHHHHHHHc--CCeEE
Confidence 6666655455777777543 2 245555553 45543
No 472
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=86.05 E-value=4 Score=35.01 Aligned_cols=110 Identities=20% Similarity=0.183 Sum_probs=69.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
-+.+||.++-+.|..+..+ .++.+++.+.-+--.... +..+|++... .+-.+ ..+..||+|+.
T Consensus 45 ~~~~~l~~n~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~----l~~~~~~~~~--~~~~~----~~~~~~d~v~~ 107 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPL-------EGRMAVERLETSRAAFRC----LTASGLQARL--ALPWE----AAAGAYDLVVL 107 (381)
T ss_dssp CSSEEEESSCTTSTTTGGG-------BTTBEEEEEECBHHHHHH----HHHTTCCCEE--CCGGG----SCTTCEEEEEE
T ss_pred hCCcEEEecCCCCcccccc-------CCCCceEEEeCcHHHHHH----HHHcCCCccc--cCCcc----CCcCCCCEEEE
Confidence 3478999999999743222 134578887655444333 5667776522 11111 12468999998
Q ss_pred CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHH
Q 025211 122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMME 188 (256)
Q Consensus 122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 188 (256)
-.|=. ++.......|.++...|++||.+++........+.+.+.+..
T Consensus 108 ~~Pk~--------------------k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~~ 154 (381)
T 3dmg_A 108 ALPAG--------------------RGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARA 154 (381)
T ss_dssp ECCGG--------------------GCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHHH
T ss_pred ECCcc--------------------hhHHHHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHHh
Confidence 66610 112235677888999999999999977655555666666653
No 473
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=85.96 E-value=3.6 Score=32.83 Aligned_cols=81 Identities=12% Similarity=0.089 Sum_probs=54.7
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc-------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------- 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------- 112 (256)
.+++||=.|+ +|.++.++++.|.++ ++.|++++.++...+...+.+...+....++..|+.+... ...
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4577887765 566777888877654 5689999999887776666555545445777788765421 111
Q ss_pred CCCccEEEECCCC
Q 025211 113 AGLVDVMVVNPPY 125 (256)
Q Consensus 113 ~~~fD~Ii~npP~ 125 (256)
.+.+|++|.|--.
T Consensus 90 ~~~id~li~~Ag~ 102 (266)
T 1xq1_A 90 GGKLDILINNLGA 102 (266)
T ss_dssp TTCCSEEEEECCC
T ss_pred CCCCcEEEECCCC
Confidence 1578999987543
No 474
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.91 E-value=4.3 Score=34.49 Aligned_cols=74 Identities=20% Similarity=0.129 Sum_probs=43.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV 121 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~ 121 (256)
++++|+=+|+ |.++..+++.+... +++|+++|.+++..+.+++.... .......+..+..... ..+|+||.
T Consensus 166 ~~~~VlViGa--GgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGG--GVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS---RVELLYSNSAEIETAV--AEADLLIG 236 (361)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG---GSEEEECCHHHHHHHH--HTCSEEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc---eeEeeeCCHHHHHHHH--cCCCEEEE
Confidence 4589999998 55555566655432 45999999999888777654321 1112222211111111 36899997
Q ss_pred CCC
Q 025211 122 NPP 124 (256)
Q Consensus 122 npP 124 (256)
..+
T Consensus 237 ~~~ 239 (361)
T 1pjc_A 237 AVL 239 (361)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 475
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=85.87 E-value=12 Score=29.86 Aligned_cols=82 Identities=12% Similarity=0.043 Sum_probs=55.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH-cCC-cceEEEcchhhchh--hh------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA-HNV-HADLINTDIASGLE--KR------ 111 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~-~~~-~~~~~~~d~~~~~~--~~------ 111 (256)
.+++||=.|++. .++.++++.+.++ +++|+.++.+++..+.+.+.+.. .+- ...++..|+.+... ..
T Consensus 7 ~~k~~lVTGas~-GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 7 SEAVAVVTGGSS-GIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 567888888665 4677777777654 67899999999888777766654 332 24777788765421 10
Q ss_pred cCCCccEEEECCCCC
Q 025211 112 LAGLVDVMVVNPPYV 126 (256)
Q Consensus 112 ~~~~fD~Ii~npP~~ 126 (256)
.-+++|++|.|.-+.
T Consensus 84 ~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 84 TLGCASILVNNAGQG 98 (265)
T ss_dssp HHCSCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 015789999987553
No 476
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.84 E-value=3.7 Score=32.51 Aligned_cols=81 Identities=23% Similarity=0.249 Sum_probs=58.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|+ +|.++.++++.+.++ +++|+.+|.+++..+.+.+.+...+....++..|+.+... ... -
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5678888885 456677788877754 5789999999998888777776655555788888866421 111 1
Q ss_pred CCccEEEECCCC
Q 025211 114 GLVDVMVVNPPY 125 (256)
Q Consensus 114 ~~fD~Ii~npP~ 125 (256)
+.+|++|.|.-.
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999998654
No 477
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=85.74 E-value=6.8 Score=31.69 Aligned_cols=82 Identities=16% Similarity=0.190 Sum_probs=50.7
Q ss_pred CCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------c
Q 025211 42 HPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------L 112 (256)
Q Consensus 42 ~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~ 112 (256)
.+++||=.|+++ |.++.++++.+.++ +++|++++.++...+.+++.....+ ...++.+|+.+... .. .
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467888888763 67788888887754 5789999988752222222212222 13677788765421 11 1
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-+.+|++|.|--..
T Consensus 97 ~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 97 WGSLDIIVHSIAYA 110 (285)
T ss_dssp TSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 25799999987543
No 478
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=85.58 E-value=4.9 Score=32.13 Aligned_cols=82 Identities=13% Similarity=0.046 Sum_probs=49.5
Q ss_pred CCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------c
Q 025211 42 HPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------L 112 (256)
Q Consensus 42 ~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~ 112 (256)
.+++||=.|+++ |.++.++++.+.++ +++|+.++.++...+.+++.....+. ..++..|+.+... .. .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGS-DIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCC-cEEEEccCCCHHHHHHHHHHHHHH
Confidence 467888888763 77888888887754 57899999876222222222122221 2677778765421 11 1
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-+++|++|.|--..
T Consensus 85 ~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 85 WPKFDGFVHSIGFA 98 (265)
T ss_dssp CSSEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 24789999986543
No 479
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=85.49 E-value=5.4 Score=32.47 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=43.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEe-CCHHHHHHHHHHHH-HcCCcceEEEcchhhc
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATD-INPYAVEVTRKTLE-AHNVHADLINTDIASG 107 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD-~~~~~i~~a~~~~~-~~~~~~~~~~~d~~~~ 107 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++ .+++..+.+.+.+. ..+....++..|+.+.
T Consensus 8 ~~k~~lVTGas-~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 8 TVPVALVTGAA-KRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 72 (291)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCc
Confidence 45777777755 55777888877654 57899999 99887776666654 3444446777777654
No 480
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=85.48 E-value=0.47 Score=40.75 Aligned_cols=75 Identities=7% Similarity=0.052 Sum_probs=45.6
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CCCc
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AGLV 116 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~~f 116 (256)
.++.+||=+|.|+|.++..+.+.+... +++|++++.+++..+.+++ .|.+ .++. .|+.+...... ...+
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~~~~~~~~~~~~~v~~~t~~~g~ 241 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAV-HVCNAASPTFMQDLTEALVSTGA 241 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCS-CEEETTSTTHHHHHHHHHHHHCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCc-EEEeCCChHHHHHHHHHhcCCCc
Confidence 478889988767666665555544322 5689999999998887764 3443 2332 22222222211 1369
Q ss_pred cEEEEC
Q 025211 117 DVMVVN 122 (256)
Q Consensus 117 D~Ii~n 122 (256)
|+|+-+
T Consensus 242 d~v~d~ 247 (379)
T 3iup_A 242 TIAFDA 247 (379)
T ss_dssp CEEEES
T ss_pred eEEEEC
Confidence 999874
No 481
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.20 E-value=3.6 Score=32.90 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=58.3
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++-+++..+...+.+...+....++..|+.+... ... -
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 56788877754 56777788877654 6789999999988888777776666555788888765421 111 1
Q ss_pred CCccEEEECCCC
Q 025211 114 GLVDVMVVNPPY 125 (256)
Q Consensus 114 ~~fD~Ii~npP~ 125 (256)
+++|++|.|.-.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999998754
No 482
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=84.99 E-value=6.6 Score=31.89 Aligned_cols=81 Identities=12% Similarity=0.162 Sum_probs=54.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-CCcceEEEcchhhchh--hh------c
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-NVHADLINTDIASGLE--KR------L 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-~~~~~~~~~d~~~~~~--~~------~ 112 (256)
.+++||=.|+ +|.++..+++.|.++ +++|++++.++...+...+.+... +....++.+|+.+... .. .
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4577887775 566777788877654 578999999988776655555433 4445778888765421 00 1
Q ss_pred CCCccEEEECCCC
Q 025211 113 AGLVDVMVVNPPY 125 (256)
Q Consensus 113 ~~~fD~Ii~npP~ 125 (256)
-+++|++|.|.-.
T Consensus 102 ~g~id~li~~Ag~ 114 (302)
T 1w6u_A 102 AGHPNIVINNAAG 114 (302)
T ss_dssp TCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2578999998654
No 483
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.81 E-value=4.5 Score=32.51 Aligned_cols=82 Identities=16% Similarity=0.114 Sum_probs=57.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~ 113 (256)
.+++||=.|+ +|.++..+++.+.++ +++|++++.++...+...+.+...+....++.+|+.+... .. .-
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 5678887775 566788888887754 5789999999887776666665555455778888765421 11 12
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+.+|++|.|.-+.
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4799999987543
No 484
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.53 E-value=11 Score=30.40 Aligned_cols=91 Identities=20% Similarity=0.173 Sum_probs=53.1
Q ss_pred EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCC-CccEEEECC
Q 025211 45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAG-LVDVMVVNP 123 (256)
Q Consensus 45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~fD~Ii~np 123 (256)
+|.=+| .|.++..++..+.+.+...+|+++|.+++.++.+++ .+.... ...|..+.. . ..|+|+..-
T Consensus 3 ~I~iIG--~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~~-~~~~~~~~~-----~~~aDvVilav 70 (281)
T 2g5c_A 3 NVLIVG--VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIIDE-GTTSIAKVE-----DFSPDFVMLSS 70 (281)
T ss_dssp EEEEES--CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCSE-EESCGGGGG-----GTCCSEEEECS
T ss_pred EEEEEe--cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCCccc-ccCCHHHHh-----cCCCCEEEEcC
Confidence 455566 455666666666543322379999999988766542 343211 122332221 3 679998854
Q ss_pred CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211 124 PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL 171 (256)
Q Consensus 124 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (256)
|- .....++..+...++++.+++.
T Consensus 71 p~------------------------~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 71 PV------------------------RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CH------------------------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred CH------------------------HHHHHHHHHHHhhCCCCcEEEE
Confidence 41 1245667777778888876554
No 485
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.49 E-value=8.1 Score=30.20 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=46.4
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEE
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVM 119 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~I 119 (256)
...+|+=+|+ |.++..+++.|.+. +. |+++|.+++.++.++ . ...++.+|..+.. ....-...|+|
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGS--EV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 3467877776 68888888887643 56 999999998776543 1 2378888876542 12123578999
Q ss_pred EECC
Q 025211 120 VVNP 123 (256)
Q Consensus 120 i~np 123 (256)
++..
T Consensus 76 i~~~ 79 (234)
T 2aef_A 76 IVDL 79 (234)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8853
No 486
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.44 E-value=6.1 Score=33.26 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=50.9
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEE-EEeCCHH---HHHHHHHHHHHcCCcceEEEcch--hhchhhhc
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYI-ATDINPY---AVEVTRKTLEAHNVHADLINTDI--ASGLEKRL 112 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~-giD~~~~---~i~~a~~~~~~~~~~~~~~~~d~--~~~~~~~~ 112 (256)
+++.+||=.|+ |.|..++.+++.+ ++.++ .++.++. ..+.++ ..|.+ .++..+- .+......
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~-----Ga~vi~~~~~~~~~~~~~~~~~----~lGa~-~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAAL-----GLRTINVVRDRPDIQKLSDRLK----SLGAE-HVITEEELRRPEMKNFF 235 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEECCCSCHHHHHHHHH----HTTCS-EEEEHHHHHSGGGGGTT
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHc-----CCEEEEEecCccchHHHHHHHH----hcCCc-EEEecCcchHHHHHHHH
Confidence 57899999996 4566777777653 34554 4454432 233333 34543 2332210 01111111
Q ss_pred C--CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 113 A--GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 113 ~--~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
. ..+|+|+-.-. -.. ...+.++|+++|+++++
T Consensus 236 ~~~~~~Dvvid~~g---------------------------~~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 236 KDMPQPRLALNCVG---------------------------GKS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp SSSCCCSEEEESSC---------------------------HHH-HHHHHTTSCTTCEEEEC
T ss_pred hCCCCceEEEECCC---------------------------cHH-HHHHHHhhCCCCEEEEE
Confidence 1 14899987411 112 23567899999999885
No 487
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=84.38 E-value=6.6 Score=30.96 Aligned_cols=127 Identities=13% Similarity=0.026 Sum_probs=68.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEE-eCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh-------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIAT-DINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------- 111 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~gi-D~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------- 111 (256)
.+++||=.|++. .++.++++.+.++ ++.|+.+ .-+++..+...+.+...+....++..|+.+... ..
T Consensus 6 ~~k~vlITGas~-gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 6 KGKVALVTGASR-GIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 467788777664 4677778877654 5678775 555666665555555555445677777655421 00
Q ss_pred -----cCCCccEEEECCCCCCCCCccccccc-chhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211 112 -----LAGLVDVMVVNPPYVPTPEDEVGREG-IASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL 174 (256)
Q Consensus 112 -----~~~~fD~Ii~npP~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (256)
..+++|++|.|.-+......+....+ ....+... ..-...+++.+.+.++++|+++++..
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---~~g~~~l~~~~~~~~~~~~~iv~isS 148 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN---AKAPFFIIQQALSRLRDNSRIINISS 148 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHH---THHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhh---chHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 01349999998765432221100000 00000000 00122345666777788898887653
No 488
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=84.34 E-value=6.3 Score=31.88 Aligned_cols=82 Identities=13% Similarity=0.124 Sum_probs=55.0
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~ 113 (256)
.+++||=.|+ +|.++..+++.+.++ +++|++++-++...+.+.+.+...+....++.+|+.+... .. .-
T Consensus 43 ~~k~vlITGa-sggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 43 ENKVALVTGA-GRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp SSCEEEEEST-TSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 3577887775 467788888888754 5789999988877766655555444445777888765421 11 12
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+.+|++|.|.-..
T Consensus 120 ~~id~li~~Ag~~ 132 (285)
T 2c07_A 120 KNVDILVNNAGIT 132 (285)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5789999986543
No 489
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.23 E-value=5.1 Score=31.69 Aligned_cols=81 Identities=14% Similarity=0.198 Sum_probs=55.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|+ +|.++..+++.|.++ +++|++++.++...+...+.+...+....++.+|+.+... ... .
T Consensus 12 ~~k~vlItGa-sggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGG-AQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4677887775 566777888877654 5789999999887766666665545455778888765421 111 1
Q ss_pred CCccEEEECCCC
Q 025211 114 GLVDVMVVNPPY 125 (256)
Q Consensus 114 ~~fD~Ii~npP~ 125 (256)
+.+|++|.|.-.
T Consensus 89 ~~id~vi~~Ag~ 100 (260)
T 3awd_A 89 GRVDILVACAGI 100 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987654
No 490
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=84.11 E-value=7.5 Score=31.22 Aligned_cols=79 Identities=13% Similarity=0.151 Sum_probs=51.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.+|.+++.++.+.+.+ +....++..|+.+... ... -
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 10 ENKVAIITGAC-GGIGLETSRVLARA--GARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56788877765 55677777777654 578999999877665554433 4444777788765421 111 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|+++.|--..
T Consensus 84 g~id~lv~nAg~~ 96 (271)
T 3tzq_B 84 GRLDIVDNNAAHS 96 (271)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4799999987554
No 491
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.01 E-value=14 Score=29.33 Aligned_cols=83 Identities=20% Similarity=0.231 Sum_probs=55.5
Q ss_pred CCCEEEEecc-cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-CcceEEEcchhhchh--hhc-----
Q 025211 42 HPVLCMEVGC-GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-VHADLINTDIASGLE--KRL----- 112 (256)
Q Consensus 42 ~~~~VLDlGc-G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-~~~~~~~~d~~~~~~--~~~----- 112 (256)
.+++||=.|+ |.| ++.++++.+.++ +++|+.++.++...+.+.+.+...+ ....++..|+.+... ...
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 5678888876 444 455566666644 6789999999988877777665443 234788888765421 110
Q ss_pred -CCCccEEEECCCCCC
Q 025211 113 -AGLVDVMVVNPPYVP 127 (256)
Q Consensus 113 -~~~fD~Ii~npP~~~ 127 (256)
-+++|++|.|.-+..
T Consensus 98 ~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HhCCCcEEEECCCcCC
Confidence 147899999876543
No 492
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.88 E-value=8.9 Score=31.05 Aligned_cols=91 Identities=16% Similarity=0.198 Sum_probs=53.1
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP 123 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np 123 (256)
.+|.=+|+| .++..++..+.+.+.+..|+++|.+++.++.+.+ .+.. .....|..+.. ...|+|+..-
T Consensus 7 ~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~-~~~~~~~~~~~-----~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLG--LIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIV-DEATADFKVFA-----ALADVIILAV 74 (290)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSC-SEEESCTTTTG-----GGCSEEEECS
T ss_pred ceEEEEeeC--HHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCc-ccccCCHHHhh-----cCCCEEEEcC
Confidence 467667755 4444456555443445689999999987765543 2321 11222332221 3579998854
Q ss_pred CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhc-cccCeEEE
Q 025211 124 PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKL-LSKRGWLY 170 (256)
Q Consensus 124 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-LkpgG~l~ 170 (256)
|- .....++..+... |+++.+++
T Consensus 75 p~------------------------~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 PI------------------------KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CH------------------------HHHHHHHHHHHTSCCCTTCEEE
T ss_pred CH------------------------HHHHHHHHHHHhcCCCCCCEEE
Confidence 41 1245677777777 88876555
No 493
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=83.67 E-value=6.6 Score=31.24 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=53.1
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--CCcceEEEcchhhchh--hhcC----
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--NVHADLINTDIASGLE--KRLA---- 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~~~~~~~~~d~~~~~~--~~~~---- 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|++++.+++..+.+.+.+... +....++..|+.+... ...+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 6 QGKLAVVTAGS-SGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45778877754 66777788877654 578999999988776665555432 2234677788765421 1111
Q ss_pred --CCccEEEECCCCC
Q 025211 114 --GLVDVMVVNPPYV 126 (256)
Q Consensus 114 --~~fD~Ii~npP~~ 126 (256)
+ +|++|.|--..
T Consensus 83 ~~g-id~lv~~Ag~~ 96 (260)
T 2z1n_A 83 LGG-ADILVYSTGGP 96 (260)
T ss_dssp TTC-CSEEEECCCCC
T ss_pred hcC-CCEEEECCCCC
Confidence 4 99999987543
No 494
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=83.37 E-value=4.5 Score=32.74 Aligned_cols=82 Identities=17% Similarity=0.172 Sum_probs=56.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|++ |.++.++++.+.++ +++|++++.+++..+.+.+.+...+....++..|+.+... ... -
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45778888855 55677778777654 6789999999988887777776555555788888765421 100 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|--..
T Consensus 100 g~id~lv~nAg~~ 112 (279)
T 3sju_A 100 GPIGILVNSAGRN 112 (279)
T ss_dssp CSCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 5799999987544
No 495
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.03 E-value=16 Score=29.10 Aligned_cols=67 Identities=21% Similarity=0.216 Sum_probs=49.0
Q ss_pred CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211 44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP 123 (256)
Q Consensus 44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np 123 (256)
++||=.| + |.++..+++.|.++ +.+|++++-++...+.... ...+++.+|+.+.. -..+|+||..-
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~----~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS----LDGVTHLLIST 71 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC----CTTCCEEEECC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhh------CCCeEEEecccccc----cCCCCEEEECC
Confidence 6799999 4 99999999988765 5689999988765443322 12478888987742 35789999864
Q ss_pred C
Q 025211 124 P 124 (256)
Q Consensus 124 P 124 (256)
.
T Consensus 72 ~ 72 (286)
T 3ius_A 72 A 72 (286)
T ss_dssp C
T ss_pred C
Confidence 4
No 496
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=83.01 E-value=5.3 Score=29.09 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=45.4
Q ss_pred CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc--hhhhcCCCccE
Q 025211 41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG--LEKRLAGLVDV 118 (256)
Q Consensus 41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~fD~ 118 (256)
.++.+|+=+|+ |.++..+++.+.+. +..|+++|.+++.++.++. .. ...++.+|..+. +....-..+|+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHcCcccCCE
Confidence 46788998876 67777777776543 4689999999876554321 11 224566665332 11111146899
Q ss_pred EEECCC
Q 025211 119 MVVNPP 124 (256)
Q Consensus 119 Ii~npP 124 (256)
|+..-|
T Consensus 88 Vi~~~~ 93 (155)
T 2g1u_A 88 VFAFTN 93 (155)
T ss_dssp EEECSS
T ss_pred EEEEeC
Confidence 988543
No 497
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=82.99 E-value=5 Score=32.36 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=57.5
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhc------C
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRL------A 113 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~------~ 113 (256)
.+++||=.|+ +|.++.++++.+.++ +++|++++.+++..+...+.+...+....++..|+.+... ... -
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTGA-SRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4677777774 556677778877654 6799999999988887777777666666777888765421 111 1
Q ss_pred CCccEEEECCCCC
Q 025211 114 GLVDVMVVNPPYV 126 (256)
Q Consensus 114 ~~fD~Ii~npP~~ 126 (256)
+++|++|.|--+.
T Consensus 104 g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 104 GALNVLVNNAGIT 116 (270)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5799999987543
No 498
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=82.95 E-value=16 Score=29.07 Aligned_cols=82 Identities=15% Similarity=0.180 Sum_probs=56.6
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH-cCCcceEEEcchhhchh--hhc------
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA-HNVHADLINTDIASGLE--KRL------ 112 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~-~~~~~~~~~~d~~~~~~--~~~------ 112 (256)
.+++||=.|++ |.++.++++.+.++ +++|+.++.+++..+.+.+.+.. .+....++..|+.+... ...
T Consensus 19 ~~k~vlVTGas-~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGAT-KGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56788877765 45677777777654 67899999998888777666654 45555788888866531 110
Q ss_pred CCCccEEEECCCCC
Q 025211 113 AGLVDVMVVNPPYV 126 (256)
Q Consensus 113 ~~~fD~Ii~npP~~ 126 (256)
-+++|++|.|.-..
T Consensus 96 ~g~id~lv~nAg~~ 109 (266)
T 4egf_A 96 FGGLDVLVNNAGIS 109 (266)
T ss_dssp HTSCSEEEEECCCC
T ss_pred cCCCCEEEECCCcC
Confidence 15799999986544
No 499
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=82.91 E-value=11 Score=32.31 Aligned_cols=81 Identities=12% Similarity=-0.032 Sum_probs=49.9
Q ss_pred CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH---HHHHHHHHHHHc---------CCcceEEEcchhhch-
Q 025211 42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY---AVEVTRKTLEAH---------NVHADLINTDIASGL- 108 (256)
Q Consensus 42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~---~i~~a~~~~~~~---------~~~~~~~~~d~~~~~- 108 (256)
++++||=.| |+|.++..++..|.+ .+++|++++-++. ..+...+.+... +....++.+|+.+..
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQG--YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTT--TEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHc--CCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 456787777 568888888888853 3678999987765 444444333221 223478888987631
Q ss_pred hhhcCCCccEEEECCCCC
Q 025211 109 EKRLAGLVDVMVVNPPYV 126 (256)
Q Consensus 109 ~~~~~~~fD~Ii~npP~~ 126 (256)
.. ....+|+|+-+-.+.
T Consensus 145 l~-~~~~~d~Vih~A~~~ 161 (427)
T 4f6c_A 145 VV-LPENMDTIIHAGART 161 (427)
T ss_dssp CC-CSSCCSEEEECCCCC
T ss_pred CC-CcCCCCEEEECCccc
Confidence 11 336799999875443
No 500
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=82.91 E-value=2.6 Score=45.17 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=61.3
Q ss_pred CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhc-CC
Q 025211 41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRL-AG 114 (256)
Q Consensus 41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~-~~ 114 (256)
+++.+||=.|. |.|..++.+++. .+++|++++.+++..+.+++.....+.. .++.. ++.+...... ..
T Consensus 1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~-----~Ga~Viat~~s~~k~~~l~~~~~~lga~-~v~~~~~~~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1666 QPGESVLIHSGSGGVGQAAIAIALS-----RGCRVFTTVGSAEKRAYLQARFPQLDET-CFANSRDTSFEQHVLRHTAGK 1739 (2512)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCTTCCST-TEEESSSSHHHHHHHHTTTSC
T ss_pred CCCCEEEEEeCChHHHHHHHHHHHH-----cCCEEEEEeCChhhhHHHHhhcCCCCce-EEecCCCHHHHHHHHHhcCCC
Confidence 57889998864 456666666665 3568999999998887776643212222 22222 2222222221 23
Q ss_pred CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211 115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV 172 (256)
Q Consensus 115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (256)
.+|+|+-.. -...+....++|+++|+++.+
T Consensus 1740 GvDvVld~~----------------------------g~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1740 GVDLVLNSL----------------------------AEEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CEEEEEECC----------------------------CHHHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECC----------------------------CchHHHHHHHhcCCCcEEEEe
Confidence 599998631 134578888999999998864
Done!