Query         025211
Match_columns 256
No_of_seqs    156 out of 2023
Neff          9.3 
Searched_HMMs 13730
Date          Mon Mar 25 05:51:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025211.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025211hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2b3ta1 c.66.1.30 (A:2-275) N5 100.0 3.9E-31 2.8E-35  219.0  19.7  187   10-208    80-271 (274)
  2 d1nv8a_ c.66.1.30 (A:) N5-glut  99.9 4.7E-27 3.4E-31  193.8  18.4  182   10-209    81-266 (271)
  3 d2h00a1 c.66.1.54 (A:5-254) Me  99.9 4.7E-23 3.4E-27  168.7  20.2  188    6-198    23-233 (250)
  4 d1dusa_ c.66.1.4 (A:) Hypothet  99.9 5.3E-21 3.9E-25  150.8  16.8  143   11-189    25-173 (194)
  5 d2nxca1 c.66.1.39 (A:1-254) Pr  99.9   9E-21 6.6E-25  155.0  18.7  137   24-198   107-243 (254)
  6 d1l3ia_ c.66.1.22 (A:) Precorr  99.8 1.4E-19   1E-23  141.6  16.3  140   20-194    14-155 (186)
  7 d1vl5a_ c.66.1.41 (A:) Hypothe  99.8 8.2E-19 5.9E-23  141.3  15.6  105   41-174    14-119 (231)
  8 d1xxla_ c.66.1.41 (A:) Hypothe  99.8   7E-19 5.1E-23  142.3  14.8  106   41-175    15-121 (234)
  9 d1ws6a1 c.66.1.46 (A:15-185) M  99.8 1.9E-18 1.4E-22  133.1  15.2  128   15-174    17-148 (171)
 10 d1im8a_ c.66.1.14 (A:) Hypothe  99.8 1.2E-17 8.9E-22  134.2  17.7  109   41-174    38-148 (225)
 11 d1nkva_ c.66.1.21 (A:) Hypothe  99.8 4.9E-18 3.5E-22  138.3  15.4  139   24-194    18-179 (245)
 12 d2o57a1 c.66.1.18 (A:16-297) P  99.8 1.1E-17   8E-22  139.0  17.5  106   41-174    66-173 (282)
 13 d1ve3a1 c.66.1.43 (A:2-227) Hy  99.8 3.6E-18 2.6E-22  136.7  13.3  107   41-174    36-142 (226)
 14 d1yb2a1 c.66.1.13 (A:6-255) Hy  99.8 3.2E-18 2.3E-22  139.2  12.5  123   41-195    84-208 (250)
 15 d2ex4a1 c.66.1.42 (A:2-224) Ad  99.8 4.8E-18 3.5E-22  136.3  13.1  134   41-200    59-207 (222)
 16 d2fcaa1 c.66.1.53 (A:10-213) t  99.7 1.8E-17 1.3E-21  130.9  15.5  138   41-195    28-166 (204)
 17 d1wxxa2 c.66.1.51 (A:65-382) H  99.7 1.6E-17 1.2E-21  140.1  15.7  142   41-200   144-293 (318)
 18 d1wzna1 c.66.1.43 (A:1-251) Hy  99.7 9.5E-18 6.9E-22  136.7  13.5  118   30-175    29-147 (251)
 19 d2f8la1 c.66.1.45 (A:2-329) Hy  99.7 2.2E-17 1.6E-21  140.1  15.8  165   17-190    95-264 (328)
 20 d1yzha1 c.66.1.53 (A:8-211) tR  99.7 3.4E-17 2.5E-21  129.4  15.3  163   12-197     7-170 (204)
 21 d2esra1 c.66.1.46 (A:28-179) P  99.7 3.1E-17 2.3E-21  123.9  13.2  105   42-174    14-122 (152)
 22 d2i6ga1 c.66.1.44 (A:1-198) Pu  99.7 2.4E-17 1.8E-21  129.8  12.6  105   42-174    30-135 (198)
 23 d1o54a_ c.66.1.13 (A:) Hypothe  99.7   8E-17 5.8E-21  132.2  16.1  126   41-198   102-229 (266)
 24 d1g8sa_ c.66.1.3 (A:) Fibrilla  99.7 2.8E-16 2.1E-20  126.3  18.8  170   14-210    45-225 (230)
 25 d1xtpa_ c.66.1.42 (A:) Hypothe  99.7 4.4E-17 3.2E-21  133.3  14.3  136   38-200    89-239 (254)
 26 d1y8ca_ c.66.1.43 (A:) Putativ  99.7 2.2E-17 1.6E-21  134.3  12.1  119   27-173    23-142 (246)
 27 d2as0a2 c.66.1.51 (A:73-396) H  99.7   1E-16 7.6E-21  135.4  16.6  152   23-196   131-291 (324)
 28 d1i9ga_ c.66.1.13 (A:) Probabl  99.7 4.9E-17 3.5E-21  132.9  13.0  127   41-198    95-226 (264)
 29 d2fpoa1 c.66.1.46 (A:10-192) M  99.7   2E-16 1.4E-20  123.1  15.4  130   11-174    15-150 (183)
 30 d2fhpa1 c.66.1.46 (A:1-182) Pu  99.7 1.7E-16 1.2E-20  123.2  14.2  126   16-174    19-152 (182)
 31 d2frna1 c.66.1.47 (A:19-278) H  99.7 4.8E-16 3.5E-20  127.2  17.2  146   11-196    83-236 (260)
 32 d2b25a1 c.66.1.13 (A:6-329) Hy  99.7 1.3E-16 9.1E-21  134.3  13.3  132   41-201    97-242 (324)
 33 d2gh1a1 c.66.1.49 (A:13-293) M  99.7 1.1E-16 8.2E-21  132.8  12.6  118   27-174    14-132 (281)
 34 d2b78a2 c.66.1.51 (A:69-385) H  99.7 8.1E-16 5.9E-20  129.2  16.9  129   41-186   143-277 (317)
 35 d1tw3a2 c.66.1.12 (A:99-351) C  99.7 6.1E-16 4.5E-20  126.3  15.8  131   41-199    79-236 (253)
 36 d1g8aa_ c.66.1.3 (A:) Fibrilla  99.7   2E-15 1.4E-19  121.0  18.3  155   16-197    46-210 (227)
 37 d1wy7a1 c.66.1.32 (A:4-204) Hy  99.7 8.2E-16   6E-20  121.2  15.7   78   41-128    45-122 (201)
 38 d1pjza_ c.66.1.36 (A:) Thiopur  99.7   9E-17 6.5E-21  125.7   9.7  110   40-175    18-140 (201)
 39 d1ri5a_ c.66.1.34 (A:) mRNA ca  99.7 6.2E-16 4.5E-20  126.2  14.9  124   41-190    23-148 (252)
 40 d2fk8a1 c.66.1.18 (A:22-301) M  99.7   2E-15 1.4E-19  124.9  16.9  114   28-173    41-156 (280)
 41 d1p91a_ c.66.1.33 (A:) rRNA me  99.7 3.2E-16 2.3E-20  129.1  11.9  108   40-185    82-189 (268)
 42 d2igta1 c.66.1.51 (A:1-309) Pu  99.7 1.7E-15 1.2E-19  126.0  15.9  130   41-187   131-267 (309)
 43 d2bzga1 c.66.1.36 (A:17-245) T  99.6 2.4E-15 1.7E-19  121.0  16.2  140   24-193    30-198 (229)
 44 d1nt2a_ c.66.1.3 (A:) Fibrilla  99.6 1.5E-14 1.1E-18  114.5  20.5  121   24-173    39-160 (209)
 45 d2avna1 c.66.1.41 (A:1-246) Hy  99.6 3.9E-16 2.8E-20  126.2  11.1  101   41-175    41-142 (246)
 46 d1dl5a1 c.66.1.7 (A:1-213) Pro  99.6 4.3E-16 3.2E-20  124.0  10.9  113   25-172    61-174 (213)
 47 d1kpia_ c.66.1.18 (A:) CmaA2 {  99.6 8.8E-15 6.4E-19  121.4  19.1  123   27-174    49-173 (291)
 48 d1vlma_ c.66.1.41 (A:) Possibl  99.6 2.4E-15 1.8E-19  118.9  15.0  118   42-198    36-176 (208)
 49 d1kpga_ c.66.1.18 (A:) CmaA1 {  99.6 8.2E-15   6E-19  121.2  18.2  114   29-174    52-167 (285)
 50 d2p7ia1 c.66.1.41 (A:22-246) H  99.6 1.6E-15 1.2E-19  121.6  13.5  121   42-195    20-173 (225)
 51 d1qzza2 c.66.1.12 (A:102-357)   99.6   8E-15 5.8E-19  119.8  17.5  143   42-212    81-253 (256)
 52 d1zx0a1 c.66.1.16 (A:8-236) Gu  99.6 8.4E-16 6.1E-20  123.7  11.3  111   41-172    52-162 (229)
 53 d2ifta1 c.66.1.46 (A:11-193) P  99.6 9.4E-15 6.8E-19  113.4  14.8  125   17-174    22-154 (183)
 54 d2a14a1 c.66.1.15 (A:5-261) In  99.6   3E-15 2.2E-19  121.9  11.8  153   41-215    50-257 (257)
 55 d1xvaa_ c.66.1.5 (A:) Glycine   99.6 1.2E-14 8.6E-19  121.0  15.6  125   27-174    44-175 (292)
 56 d2okca1 c.66.1.45 (A:9-433) Ty  99.6   2E-14 1.5E-18  125.7  17.0  161   16-190   143-320 (425)
 57 d1i1na_ c.66.1.7 (A:) Protein-  99.6 4.7E-15 3.4E-19  118.7  11.6  115   26-173    61-181 (224)
 58 d1ne2a_ c.66.1.32 (A:) Hypothe  99.6 1.1E-14 7.9E-19  113.7  13.3   73   41-127    47-119 (197)
 59 d1jqea_ c.66.1.19 (A:) Histami  99.6 2.3E-14 1.7E-18  118.4  15.0  132   24-176    17-163 (280)
 60 d2ih2a1 c.66.1.27 (A:21-243) D  99.6   3E-14 2.2E-18  113.4  14.5  178   17-215     1-192 (223)
 61 d1uwva2 c.66.1.40 (A:75-432) r  99.5 1.5E-13 1.1E-17  117.4  15.0  153   11-198   182-339 (358)
 62 d2ar0a1 c.66.1.45 (A:6-529) M.  99.5   4E-13 2.9E-17  120.2  17.2  161   15-190   144-329 (524)
 63 d1m6ya2 c.66.1.23 (A:2-114,A:2  99.5 2.6E-13 1.9E-17  105.6  13.6  141   29-188    13-156 (192)
 64 d1jg1a_ c.66.1.7 (A:) Protein-  99.5 1.6E-13 1.2E-17  108.6  11.3  112   25-173    64-176 (215)
 65 d1vbfa_ c.66.1.7 (A:) Protein-  99.5   1E-13 7.6E-18  110.4  10.0  109   26-173    57-165 (224)
 66 d2fyta1 c.66.1.6 (A:238-548) P  99.5 4.9E-13 3.5E-17  112.0  14.4  118   25-171    21-140 (311)
 67 d1g6q1_ c.66.1.6 (1:) Arginine  99.5   3E-13 2.2E-17  114.2  12.8  104   41-170    37-142 (328)
 68 d2g72a1 c.66.1.15 (A:18-280) P  99.4 3.2E-13 2.3E-17  110.5  11.6  135   41-197    53-237 (263)
 69 d1oria_ c.66.1.6 (A:) Protein   99.4 2.3E-13 1.7E-17  114.3  10.9  104   41-170    32-137 (316)
 70 d1sqga2 c.66.1.38 (A:145-428)   99.4 9.1E-12 6.6E-16  102.7  20.3  161   16-189    82-249 (284)
 71 d1r18a_ c.66.1.7 (A:) Protein-  99.4 3.1E-13 2.3E-17  107.7   9.3  116   27-173    66-190 (223)
 72 d1jsxa_ c.66.1.20 (A:) Glucose  99.4 2.5E-12 1.8E-16  100.9  13.8  127   24-183    47-174 (207)
 73 d1nw3a_ c.66.1.31 (A:) Catalyt  99.4 2.5E-12 1.8E-16  108.4  14.3  120   24-172   136-265 (328)
 74 d2cl5a1 c.66.1.1 (A:3-216) Cat  99.4 4.5E-12 3.3E-16  100.3  14.2  123   42-189    56-184 (214)
 75 d2avda1 c.66.1.1 (A:44-262) CO  99.4 5.4E-12 3.9E-16  100.1  13.3  104   41-171    58-167 (219)
 76 d1susa1 c.66.1.1 (A:21-247) Ca  99.3 7.5E-12 5.5E-16   99.7  13.1  103   42-171    59-168 (227)
 77 d1ixka_ c.66.1.38 (A:) Hypothe  99.3 7.5E-11 5.5E-15   98.4  19.4  163   16-192    96-266 (313)
 78 d1u2za_ c.66.1.31 (A:) Catalyt  99.3 1.4E-12 9.9E-17  112.2   8.0  118   26-172   203-332 (406)
 79 d1xdza_ c.66.1.20 (A:) Glucose  99.2 4.9E-10 3.6E-14   89.3  18.5  146   22-197    47-200 (239)
 80 d2b9ea1 c.66.1.38 (A:133-425)   99.2 2.2E-10 1.6E-14   94.7  15.8  149   16-177    74-230 (293)
 81 d1fp1d2 c.66.1.12 (D:129-372)   99.2 3.1E-10 2.3E-14   91.3  15.0  134   42-213    81-244 (244)
 82 d1o9ga_ c.66.1.29 (A:) rRNA me  99.1 1.3E-10 9.2E-15   93.2  10.1  145   14-171    22-211 (249)
 83 d1uira_ c.66.1.17 (A:) Spermid  99.1 2.3E-10 1.7E-14   95.1  11.8  112   41-173    76-195 (312)
 84 d1af7a2 c.66.1.8 (A:92-284) Ch  99.1 5.6E-10 4.1E-14   86.6  11.1  111   41-171    23-169 (193)
 85 d1inla_ c.66.1.17 (A:) Spermid  99.1 1.1E-09 7.7E-14   90.2  12.9  114   41-175    88-206 (295)
 86 d1xj5a_ c.66.1.17 (A:) Spermid  99.0 2.3E-09 1.7E-13   88.1  13.6  132   41-193    79-219 (290)
 87 d1qama_ c.66.1.24 (A:) rRNA ad  99.0   8E-10 5.8E-14   88.2   9.7   90   26-127     8-97  (235)
 88 d2o07a1 c.66.1.17 (A:16-300) S  99.0 2.3E-09 1.7E-13   87.8  12.7  114   41-176    77-195 (285)
 89 d1mjfa_ c.66.1.17 (A:) Putativ  99.0 2.8E-09 2.1E-13   87.0  13.1  132   41-197    71-217 (276)
 90 d1iy9a_ c.66.1.17 (A:) Spermid  99.0 6.2E-09 4.5E-13   84.8  13.8  135   41-198    74-217 (274)
 91 d2b2ca1 c.66.1.17 (A:3-314) Sp  98.9 2.3E-09 1.7E-13   88.6  11.0  113   41-175   105-222 (312)
 92 d1kyza2 c.66.1.12 (A:120-362)   98.9 7.7E-09 5.6E-13   82.9  13.7  133   42-211    81-242 (243)
 93 d1fp2a2 c.66.1.12 (A:109-352)   98.9 9.6E-09   7E-13   82.4  14.1  133   42-211    80-242 (244)
 94 d1wg8a2 c.66.1.23 (A:5-108,A:2  98.9   2E-09 1.5E-13   82.4   8.9  131   40-191    16-149 (182)
 95 d2dula1 c.66.1.58 (A:3-377) N(  98.9 1.5E-08 1.1E-12   86.0  14.3  102   42-173    45-162 (375)
 96 d1zq9a1 c.66.1.24 (A:36-313) P  98.8 2.2E-08 1.6E-12   81.5  12.8   88   26-126     8-97  (278)
 97 d1yuba_ c.66.1.24 (A:) rRNA ad  98.8 1.3E-10 9.5E-15   93.4  -1.6   89   28-128    18-106 (245)
 98 d1ej0a_ c.66.1.2 (A:) RNA meth  98.8 1.9E-07 1.4E-11   71.1  15.1  136   41-200    21-163 (180)
 99 d1qyra_ c.66.1.24 (A:) High le  98.6 3.1E-08 2.3E-12   79.5   5.8   92   26-127     8-102 (252)
100 d2oyra1 c.66.1.55 (A:1-250) Hy  98.3 1.4E-06   1E-10   69.2  10.4   81   42-129    88-178 (250)
101 d2bm8a1 c.66.1.50 (A:2-233) Ce  98.3   7E-07 5.1E-11   70.5   7.8  103   42-171    80-184 (232)
102 d1g60a_ c.66.1.11 (A:) Methylt  98.0 8.1E-06 5.9E-10   64.7   8.4   89   98-194     6-94  (256)
103 d1eg2a_ c.66.1.11 (A:) m.RsrI   97.7 0.00012 8.6E-09   58.5  10.2   87   98-194     6-100 (279)
104 d1dcta_ c.66.1.26 (A:) DNA met  97.6  0.0023 1.7E-07   51.7  17.5  151   45-214     2-164 (324)
105 d1g60a_ c.66.1.11 (A:) Methylt  97.6  0.0001 7.3E-09   58.1   8.4   58   24-91    198-255 (256)
106 d2c7pa1 c.66.1.26 (A:1-327) DN  97.6  0.0019 1.4E-07   52.5  16.1  153   42-214    10-174 (327)
107 d1i4wa_ c.66.1.24 (A:) Transcr  97.6 0.00017 1.3E-08   59.3   9.5   77   25-107    23-102 (322)
108 d1booa_ c.66.1.11 (A:) m.PvuII  97.5 6.4E-05 4.6E-09   61.2   6.2   60   24-93    236-295 (320)
109 d1g55a_ c.66.1.26 (A:) DNMT2 {  97.5  0.0013 9.2E-08   53.8  14.3  155   43-215     2-171 (343)
110 d1booa_ c.66.1.11 (A:) m.PvuII  97.5 0.00011   8E-09   59.7   7.3   69   98-173    14-82  (320)
111 d2p41a1 c.66.1.25 (A:8-264) An  97.5 0.00012   9E-09   57.3   7.0  108   41-171    65-173 (257)
112 d1e3ja2 c.2.1.1 (A:143-312) Ke  97.5 9.9E-05 7.2E-09   54.7   6.2   98   41-174    25-130 (170)
113 d1eg2a_ c.66.1.11 (A:) m.RsrI   97.5 0.00022 1.6E-08   56.7   8.8   64   20-93    189-252 (279)
114 d1jqba2 c.2.1.1 (A:1140-1313)   97.4 0.00017 1.2E-08   53.9   6.6   97   41-173    26-127 (174)
115 d1f8fa2 c.2.1.1 (A:163-336) Be  97.3 0.00056 4.1E-08   50.8   8.5   97   41-173    27-127 (174)
116 d1piwa2 c.2.1.1 (A:153-320) Ci  97.2 0.00062 4.5E-08   50.2   8.3   97   41-173    26-124 (168)
117 d1kola2 c.2.1.1 (A:161-355) Fo  97.2 0.00085 6.2E-08   50.8   9.2  113   41-173    24-140 (195)
118 d1vj0a2 c.2.1.1 (A:156-337) Hy  97.1 0.00021 1.5E-08   53.6   4.2   96   41-173    27-131 (182)
119 d1yb5a2 c.2.1.1 (A:121-294) Qu  97.1 0.00094 6.8E-08   49.4   7.8   95   41-173    27-127 (174)
120 d1pl8a2 c.2.1.1 (A:146-316) Ke  97.1 0.00061 4.4E-08   50.4   6.7   99   41-174    25-129 (171)
121 d1e3ia2 c.2.1.1 (A:168-341) Al  97.0 0.00052 3.8E-08   51.1   6.1   98   41-174    27-131 (174)
122 d1llua2 c.2.1.1 (A:144-309) Al  96.8  0.0022 1.6E-07   46.8   7.7   96   41-173    26-124 (166)
123 d1h2ba2 c.2.1.1 (A:155-326) Al  96.7   0.003 2.2E-07   46.5   8.1   98   41-174    31-132 (172)
124 d1jvba2 c.2.1.1 (A:144-313) Al  96.6  0.0025 1.8E-07   46.7   6.7   98   40-173    25-128 (170)
125 d2g5ca2 c.2.1.6 (A:30-200) Pre  96.4   0.013 9.4E-07   42.6   9.9   92   45-171     3-94  (171)
126 d1rjwa2 c.2.1.1 (A:138-305) Al  96.3  0.0075 5.5E-07   43.8   7.9   97   41-173    26-124 (168)
127 d2fzwa2 c.2.1.1 (A:163-338) Al  95.8  0.0077 5.6E-07   44.1   6.0   97   41-173    27-129 (176)
128 d2c07a1 c.2.1.2 (A:54-304) bet  95.8   0.091 6.7E-06   40.6  12.6   87   40-129     7-101 (251)
129 d1pqwa_ c.2.1.1 (A:) Putative   95.7    0.02 1.4E-06   42.1   7.8   95   41-172    24-123 (183)
130 d1d1ta2 c.2.1.1 (A:163-338) Al  95.7   0.015 1.1E-06   42.8   7.1   45   41-89     28-73  (176)
131 d1xg5a_ c.2.1.2 (A:) Putative   95.6    0.12 9.1E-06   40.0  13.0   84   42-128     9-102 (257)
132 d1iz0a2 c.2.1.1 (A:99-269) Qui  95.6    0.01 7.3E-07   43.5   5.9   92   41-172    26-119 (171)
133 d1qora2 c.2.1.1 (A:113-291) Qu  95.6   0.019 1.4E-06   42.1   7.3   95   41-173    27-127 (179)
134 d1p0fa2 c.2.1.1 (A:1164-1337)   95.4   0.012 8.4E-07   43.3   5.6   73   41-122    26-104 (174)
135 d1uufa2 c.2.1.1 (A:145-312) Hy  95.4   0.014   1E-06   42.4   6.1   96   41-174    29-125 (168)
136 d2jhfa2 c.2.1.1 (A:164-339) Al  95.3   0.014   1E-06   42.8   5.7   97   41-172    27-129 (176)
137 d2dpma_ c.66.1.28 (A:) DNA met  95.2    0.16 1.2E-05   39.5  12.4   48   25-84     13-60  (275)
138 d1pjca1 c.2.1.4 (A:136-303) L-  95.1   0.041   3E-06   40.0   7.6   72   41-122    30-102 (168)
139 d1fmca_ c.2.1.2 (A:) 7-alpha-h  95.1    0.14   1E-05   39.6  11.4   83   42-127    10-100 (255)
140 d1vj1a2 c.2.1.1 (A:125-311) Pu  95.1     0.1 7.6E-06   38.3  10.2   97   41-172    29-129 (187)
141 d1zkda1 c.66.1.52 (A:2-366) Hy  95.0   0.046 3.3E-06   45.0   8.6   67   24-90     57-130 (365)
142 d2f1ka2 c.2.1.6 (A:1-165) Prep  94.8    0.18 1.3E-05   35.9  10.7   87   46-171     3-89  (165)
143 d1lssa_ c.2.1.9 (A:) Ktn Mja21  94.6   0.055   4E-06   37.4   7.1   65   51-122     6-72  (132)
144 d1v3va2 c.2.1.1 (A:113-294) Le  94.5   0.038 2.8E-06   40.6   6.2   94   41-172    28-127 (182)
145 d2py6a1 c.66.1.56 (A:14-408) M  94.2   0.075 5.5E-06   44.1   8.2   53   41-95    211-263 (395)
146 d2hmva1 c.2.1.9 (A:7-140) Ktn   94.1   0.083 6.1E-06   36.4   7.2   64   51-122     6-71  (134)
147 d2ae2a_ c.2.1.2 (A:) Tropinone  94.1    0.45 3.3E-05   36.6  12.3   85   41-128     6-99  (259)
148 d1xa0a2 c.2.1.1 (A:119-294) B.  94.1   0.032 2.3E-06   41.0   5.0   97   41-174    30-129 (176)
149 d1wmaa1 c.2.1.2 (A:2-276) Carb  93.9    0.22 1.6E-05   38.8  10.2  127   43-173     2-137 (275)
150 d1cdoa2 c.2.1.1 (A:165-339) Al  93.8   0.054 3.9E-06   39.3   5.8   73   41-122    27-105 (175)
151 d1g0oa_ c.2.1.2 (A:) 1,3,8-tri  93.7    0.56 4.1E-05   36.2  12.2  128   41-173    16-152 (272)
152 d1xhla_ c.2.1.2 (A:) Hypotheti  93.5    0.32 2.3E-05   37.8  10.5   80   42-124     3-93  (274)
153 d1ja9a_ c.2.1.2 (A:) 1,3,6,8-t  93.2    0.32 2.3E-05   37.4   9.9  127   41-173     4-140 (259)
154 d1ae1a_ c.2.1.2 (A:) Tropinone  93.2    0.57 4.2E-05   36.0  11.4   85   41-128     4-97  (258)
155 d1gu7a2 c.2.1.1 (A:161-349) 2,  92.1    0.29 2.1E-05   35.8   7.8   98   41-172    27-136 (189)
156 d1bg6a2 c.2.1.6 (A:4-187) N-(1  92.0     1.1 8.3E-05   31.7  11.2  114   44-191     2-124 (184)
157 d2bgka1 c.2.1.2 (A:11-278) Rhi  92.0    0.53 3.9E-05   36.3   9.7   81   42-126     5-93  (268)
158 d2fy8a1 c.2.1.9 (A:116-244) Po  91.6    0.74 5.4E-05   31.1   9.2   89   51-173     6-96  (129)
159 d2oo3a1 c.66.1.59 (A:9-279) Un  91.4    0.64 4.6E-05   36.1   9.3  118   47-192    87-210 (271)
160 d1vl8a_ c.2.1.2 (A:) Gluconate  91.2     2.1 0.00015   32.4  12.4   83   41-126     3-94  (251)
161 d1m6ex_ c.66.1.35 (X:) Salicyl  91.1    0.71 5.2E-05   37.4   9.8  131   43-175    52-211 (359)
162 d1xq1a_ c.2.1.2 (A:) Tropinone  91.1    0.62 4.5E-05   35.8   9.1   84   41-127     6-98  (259)
163 d1gega_ c.2.1.2 (A:) meso-2,3-  91.1     1.6 0.00012   33.2  11.6   78   46-126     4-89  (255)
164 d1id1a_ c.2.1.9 (A:) Rck domai  91.0       1 7.3E-05   31.3   9.6  110   51-192     9-120 (153)
165 d2rhca1 c.2.1.2 (A:5-261) beta  90.8    0.96   7E-05   34.5  10.0   81   43-126     2-90  (257)
166 d1o89a2 c.2.1.1 (A:116-292) Hy  90.7    0.56 4.1E-05   33.9   8.1   93   43-173    32-126 (177)
167 d1yb1a_ c.2.1.2 (A:) 17-beta-h  90.7    0.87 6.4E-05   34.6   9.6   86   42-130     6-99  (244)
168 d1tt7a2 c.2.1.1 (A:128-294) Hy  90.2    0.42 3.1E-05   34.3   6.9   96   42-174    23-121 (167)
169 d1hxha_ c.2.1.2 (A:) 3beta/17b  90.1     1.1 8.2E-05   34.1   9.8   79   42-126     5-91  (253)
170 d1zk4a1 c.2.1.2 (A:1-251) R-sp  90.1     1.3 9.2E-05   33.7  10.1   82   42-127     5-94  (251)
171 d1zema1 c.2.1.2 (A:3-262) Xyli  89.6    0.67 4.9E-05   35.6   8.2   82   42-126     4-93  (260)
172 d1luaa1 c.2.1.7 (A:98-288) Met  89.0     1.1 7.8E-05   32.6   8.6   80   41-124    21-101 (191)
173 d1q7ba_ c.2.1.2 (A:) beta-keto  88.8       2 0.00015   32.4  10.3   80   42-127     3-90  (243)
174 d1yqga2 c.2.1.6 (A:1-152) Pyrr  87.8     2.4 0.00018   29.2   9.6  107   52-200     7-113 (152)
175 d1k2wa_ c.2.1.2 (A:) Sorbitol   87.6     3.1 0.00023   31.4  10.9   81   42-128     4-92  (256)
176 d1ydea1 c.2.1.2 (A:4-253) Reti  87.5     2.2 0.00016   32.3   9.9   78   42-126     5-90  (250)
177 d1xkqa_ c.2.1.2 (A:) Hypotheti  86.5     1.4 9.9E-05   33.9   8.2   82   41-125     3-95  (272)
178 d1mv8a2 c.2.1.6 (A:1-202) GDP-  86.2       3 0.00022   30.3   9.6   34   52-87      7-40  (202)
179 d1edoa_ c.2.1.2 (A:) beta-keto  86.0     3.1 0.00023   31.3  10.0   79   46-127     4-91  (244)
180 d1pgja2 c.2.1.6 (A:1-178) 6-ph  85.4     4.5 0.00033   28.4  11.5  113   52-193     8-124 (178)
181 d1w6ua_ c.2.1.2 (A:) 2,4-dieno  85.3     3.2 0.00023   31.9  10.0   86   41-129    23-117 (294)
182 d1h5qa_ c.2.1.2 (A:) Mannitol   85.2     2.1 0.00015   32.6   8.6   84   41-127     7-99  (260)
183 d2bd0a1 c.2.1.2 (A:2-241) Bact  85.2     3.6 0.00026   30.8  10.0   82   46-128     4-98  (240)
184 d1qsga_ c.2.1.2 (A:) Enoyl-ACP  85.1     2.2 0.00016   32.1   8.8  129   42-173     4-144 (258)
185 d2d1ya1 c.2.1.2 (A:2-249) Hypo  84.3     3.1 0.00022   31.4   9.2   75   42-125     4-86  (248)
186 d1x1ta1 c.2.1.2 (A:1-260) D(-)  84.1       4 0.00029   30.8   9.9   83   42-127     3-95  (260)
187 d1o5ia_ c.2.1.2 (A:) beta-keto  82.9     1.2 8.6E-05   33.5   6.1   72   42-125     3-76  (234)
188 d2nvwa1 c.2.1.3 (A:2-154,A:374  82.7     7.5 0.00054   28.8  13.0   81   38-124    11-94  (237)
189 d1vpda2 c.2.1.6 (A:3-163) Hydr  82.5     5.8 0.00042   27.4   9.7   59   52-124     7-65  (161)
190 d1xu9a_ c.2.1.2 (A:) 11-beta-h  82.4     2.4 0.00018   32.3   7.9   82   42-126    13-103 (269)
191 d1pr9a_ c.2.1.2 (A:) Carbonyl   82.3     7.9 0.00058   28.8  11.1   79   42-127     6-88  (244)
192 d2pgda2 c.2.1.6 (A:1-176) 6-ph  81.5       5 0.00036   28.2   8.9  109   52-193     9-122 (176)
193 d1ydwa1 c.2.1.3 (A:6-133,A:305  81.2       7 0.00051   27.5  11.9   70   45-124     3-75  (184)
194 d1cyda_ c.2.1.2 (A:) Carbonyl   80.9     3.3 0.00024   31.1   8.1   78   42-126     4-85  (242)
195 d1geea_ c.2.1.2 (A:) Glucose d  79.4     3.3 0.00024   31.5   7.7   83   42-127     6-97  (261)
196 d1spxa_ c.2.1.2 (A:) Glucose d  79.0     4.2 0.00031   30.8   8.3   80   42-124     4-94  (264)
197 d2uyoa1 c.66.1.57 (A:14-310) P  78.4      13 0.00092   28.7  15.0  107   42-173    89-205 (297)
198 d1j6ua1 c.5.1.1 (A:0-88) UDP-N  78.3       2 0.00015   27.0   5.1   61   51-126    10-71  (89)
199 d2gdza1 c.2.1.2 (A:3-256) 15-h  78.2     3.9 0.00028   30.8   7.8   82   42-126     2-93  (254)
200 d1iy8a_ c.2.1.2 (A:) Levodione  78.2     4.6 0.00034   30.5   8.2   80   42-124     3-92  (258)
201 d2pd4a1 c.2.1.2 (A:2-275) Enoy  78.0       9 0.00065   28.7  10.0   84   42-128     4-96  (274)
202 d1dlja2 c.2.1.6 (A:1-196) UDP-  77.9     1.5 0.00011   31.7   5.0   34   52-88      7-40  (196)
203 d3cuma2 c.2.1.6 (A:1-162) Hydr  77.2     5.5  0.0004   27.6   7.8  103   52-193     8-116 (162)
204 d1xeaa1 c.2.1.3 (A:2-122,A:267  75.0     9.4 0.00069   26.3   8.7   68   44-122     2-69  (167)
205 d1wdka3 c.2.1.6 (A:311-496) Fa  74.3     1.8 0.00013   31.3   4.5  103   43-176     4-122 (186)
206 d1ulsa_ c.2.1.2 (A:) beta-keto  74.0       4 0.00029   30.6   6.6   77   42-126     4-88  (242)
207 d1yxma1 c.2.1.2 (A:7-303) Pero  73.6     7.9 0.00057   29.8   8.6   82   42-126    11-105 (297)
208 d1u0sy_ c.23.1.1 (Y:) CheY pro  73.4     9.3 0.00068   24.8   8.9   52   72-123     3-54  (118)
209 d1p3da1 c.5.1.1 (A:11-106) UDP  73.3     4.7 0.00034   25.6   5.9   70   42-125     7-77  (96)
210 d1v59a2 c.3.1.5 (A:161-282) Di  73.2     2.8  0.0002   27.8   5.0   52   42-97     22-81  (122)
211 d1i24a_ c.2.1.2 (A:) Sulfolipi  73.0     3.6 0.00026   32.9   6.6   76   43-121     1-96  (393)
212 d1nffa_ c.2.1.2 (A:) Putative   73.0     4.2  0.0003   30.6   6.5   80   42-127     5-92  (244)
213 d2a4ka1 c.2.1.2 (A:2-242) beta  72.9      15  0.0011   27.0  10.3   77   42-124     4-88  (241)
214 d1p6qa_ c.23.1.1 (A:) CheY pro  70.4      12 0.00085   24.7   9.5   54   70-123     6-59  (129)
215 d1pjqa1 c.2.1.11 (A:1-113) Sir  70.3     5.1 0.00037   25.9   5.8   69   40-122     9-79  (113)
216 d1l7da1 c.2.1.4 (A:144-326) Ni  70.1     2.9 0.00021   30.2   4.7   44   41-89     27-71  (183)
217 d1hdca_ c.2.1.2 (A:) 3-alpha,2  68.9     5.1 0.00037   30.2   6.3   80   42-127     4-91  (254)
218 d1txga2 c.2.1.6 (A:1-180) Glyc  68.4     2.9 0.00021   29.8   4.5   89   52-170     7-102 (180)
219 d1kgsa2 c.23.1.1 (A:2-123) Pho  67.5     4.6 0.00033   26.6   5.1   51   71-122     2-52  (122)
220 d1ez4a1 c.2.1.5 (A:16-162) Lac  67.0      16  0.0011   24.8  11.9  114   43-173     5-121 (146)
221 d1ulua_ c.2.1.2 (A:) Enoyl-ACP  66.8     8.1 0.00059   28.8   7.1   82   41-125     6-96  (256)
222 d2ew8a1 c.2.1.2 (A:3-249) (s)-  66.8     7.6 0.00055   29.0   6.9   81   42-127     4-92  (247)
223 d2ag5a1 c.2.1.2 (A:1-245) Dehy  66.1     1.5 0.00011   33.2   2.4   80   42-129     5-88  (245)
224 d1jdqa_ d.68.3.3 (A:) Hypothet  65.9      13 0.00094   23.5   7.1   44  156-199    43-86  (98)
225 d1w25a1 c.23.1.1 (A:2-140) Res  64.3      16  0.0012   24.2   7.7   51   71-122     2-52  (139)
226 d1p77a1 c.2.1.7 (A:102-272) Sh  64.0      17  0.0012   25.3   7.9   75   41-126    16-90  (171)
227 d1gz6a_ c.2.1.2 (A:) (3R)-hydr  64.0      11 0.00082   29.0   7.6   82   42-126     6-101 (302)
228 d1v8ba1 c.2.1.4 (A:235-397) S-  63.9     3.6 0.00026   29.0   4.0  126   26-197     8-133 (163)
229 d1bdba_ c.2.1.2 (A:) Cis-biphe  63.8      12 0.00084   28.4   7.5   78   42-125     4-89  (276)
230 d2h7ma1 c.2.1.2 (A:2-269) Enoy  63.5      18  0.0013   26.6   8.7   61   42-106     5-66  (268)
231 d1jbea_ c.23.1.1 (A:) CheY pro  63.5      16  0.0012   23.8  12.2   53   70-122     4-56  (128)
232 d1f0ya2 c.2.1.6 (A:12-203) Sho  61.9     8.4 0.00061   27.6   6.0  102   44-176     5-128 (192)
233 d1yf3a1 c.66.1.28 (A:1-259) DN  61.9     1.5 0.00011   33.1   1.8   48   25-86     12-59  (259)
234 d1oaaa_ c.2.1.2 (A:) Sepiapter  61.2      25  0.0018   25.9   9.0   65   42-107     5-72  (259)
235 d1ygya1 c.2.1.4 (A:99-282) Pho  60.8      15  0.0011   25.9   7.3  107   42-189    43-151 (184)
236 d1e5qa1 c.2.1.3 (A:2-124,A:392  60.6     6.6 0.00048   27.0   5.2   42   43-88      2-43  (182)
237 d1sbya1 c.2.1.2 (A:1-254) Dros  60.5       9 0.00066   28.7   6.2   81   42-126     4-95  (254)
238 d2fr1a1 c.2.1.2 (A:1657-1915)   59.8     8.9 0.00065   28.5   6.1   87   41-129     7-103 (259)
239 d1onfa2 c.3.1.5 (A:154-270) Gl  59.5      11 0.00083   24.4   5.9   52   42-97     21-80  (117)
240 d2o23a1 c.2.1.2 (A:6-253) Type  58.9     6.3 0.00046   29.2   5.0   46   41-89      3-48  (248)
241 d2ldxa1 c.2.1.5 (A:1-159) Lact  58.2      25  0.0018   24.2  11.0   41   42-84     18-58  (159)
242 d1h05a_ c.23.13.1 (A:) Type II  57.4     1.9 0.00014   29.8   1.5   60   63-124    13-75  (144)
243 d1yf3a1 c.66.1.28 (A:1-259) DN  57.1     8.5 0.00062   28.6   5.5   81   98-195   151-234 (259)
244 d1dcfa_ c.23.1.2 (A:) Receiver  54.2      25  0.0018   23.0  12.9   53   68-122     5-57  (134)
245 d1sb8a_ c.2.1.2 (A:) UDP-N-ace  53.1      14   0.001   28.3   6.5   77   42-121    15-97  (341)
246 d2cvza2 c.2.1.6 (A:2-157) Hydr  52.9      29  0.0021   23.3   7.9  100   52-192     7-109 (156)
247 d1yioa2 c.23.1.1 (A:3-130) Res  52.8      15  0.0011   24.0   5.7   50   72-122     4-53  (128)
248 d1udca_ c.2.1.2 (A:) Uridine d  52.8     3.7 0.00027   32.1   2.7   70   46-121     3-79  (338)
249 d1ks9a2 c.2.1.6 (A:1-167) Keto  52.6     1.4 0.00011   30.5   0.1   98   45-179     2-103 (167)
250 d1mb3a_ c.23.1.1 (A:) Cell div  52.5     9.2 0.00067   24.9   4.5   50   72-122     3-52  (123)
251 d1ldna1 c.2.1.5 (A:15-162) Lac  52.4      30  0.0022   23.3  14.2  117   41-174     4-124 (148)
252 d1zh8a1 c.2.1.3 (A:4-131,A:276  52.1      32  0.0024   23.7  10.9   70   44-122     4-74  (181)
253 d1ys7a2 c.23.1.1 (A:7-127) Tra  51.9      12 0.00084   24.4   4.9   50   72-122     3-52  (121)
254 d1zh2a1 c.23.1.1 (A:2-120) Tra  51.7     8.5 0.00062   25.0   4.1   50   72-122     2-51  (119)
255 d1h6da1 c.2.1.3 (A:51-212,A:37  51.7      38  0.0028   24.3  11.1   73   42-122    32-107 (221)
256 d1fcda1 c.3.1.5 (A:1-114,A:256  51.1     6.3 0.00046   26.9   3.6   36   43-80      2-37  (186)
257 d2naca1 c.2.1.4 (A:148-335) Fo  50.8      32  0.0024   24.1   7.7  110   42-189    43-153 (188)
258 d1qkka_ c.23.1.1 (A:) Transcri  50.6      30  0.0022   22.8  10.0   50   72-122     2-51  (140)
259 d1a2oa1 c.23.1.1 (A:1-140) Met  50.2      30  0.0022   22.8   7.2   52   71-122     4-56  (140)
260 d1c4oa2 c.37.1.19 (A:410-583)   49.7     4.7 0.00034   28.7   2.6   49  152-200    17-65  (174)
261 d1qp8a1 c.2.1.4 (A:83-263) Put  49.6      15  0.0011   26.0   5.5  105   42-190    41-146 (181)
262 d1xhca2 c.3.1.5 (A:104-225) NA  49.5     7.6 0.00055   25.4   3.6   50   43-96     32-88  (122)
263 d1gdha1 c.2.1.4 (A:101-291) D-  49.1      14   0.001   26.3   5.3  110   42-189    46-156 (191)
264 d1mlda1 c.2.1.5 (A:1-144) Mala  48.8      34  0.0025   22.9   8.0   23  151-174    96-118 (144)
265 d1zgza1 c.23.1.1 (A:2-121) Tor  47.0      17  0.0013   23.3   5.2   51   72-123     3-53  (120)
266 d1mx3a1 c.2.1.4 (A:126-318) Tr  46.4      44  0.0032   23.6   8.0  109   42-189    48-157 (193)
267 d1jaya_ c.2.1.6 (A:) Coenzyme   45.3      25  0.0018   23.8   6.3   41   51-93      7-47  (212)
268 d1orra_ c.2.1.2 (A:) CDP-tyvel  43.7      17  0.0012   27.5   5.4   74   45-122     2-79  (338)
269 d1ebda2 c.3.1.5 (A:155-271) Di  43.7      17  0.0012   23.2   4.6   53   41-97     20-80  (117)
270 d1je3a_ d.68.3.3 (A:) hypothet  43.6      33  0.0024   21.3   6.0   44  156-199    44-87  (97)
271 d1y1pa1 c.2.1.2 (A:2-343) Alde  43.6      62  0.0045   24.5  12.8   79   41-122     9-90  (342)
272 d1snya_ c.2.1.2 (A:) Carbonyl   43.6      23  0.0017   25.9   6.0   82   44-127     3-95  (248)
273 d2a9pa1 c.23.1.1 (A:2-118) DNA  43.4      35  0.0026   21.6   8.3   51   72-123     2-52  (117)
274 d1dxla2 c.3.1.5 (A:153-275) Di  43.3      24  0.0018   22.8   5.5   53   41-97     23-83  (123)
275 d1a5za1 c.2.1.5 (A:22-163) Lac  42.8      42   0.003   22.2  11.4   70   45-122     2-74  (140)
276 d1xhfa1 c.23.1.1 (A:2-122) Aer  42.3      38  0.0028   21.6  10.3   51   72-123     4-54  (121)
277 d1li4a1 c.2.1.4 (A:190-352) S-  41.7      14   0.001   25.8   4.1  111   41-196    22-132 (163)
278 d1c1da1 c.2.1.7 (A:149-349) Ph  41.7      26  0.0019   25.1   5.9   43   41-87     25-67  (201)
279 d1nyta1 c.2.1.7 (A:102-271) Sh  41.7      47  0.0034   22.6   8.3   75   41-126    16-90  (170)
280 d1mvoa_ c.23.1.1 (A:) PhoP rec  41.0      39  0.0029   21.4   8.0   51   72-123     4-54  (121)
281 d1zesa1 c.23.1.1 (A:3-123) Pho  40.1      41   0.003   21.4  10.6   50   72-122     2-51  (121)
282 d2ax3a2 c.104.1.1 (A:1-211) Hy  40.1      45  0.0033   23.9   7.0   34   42-78     39-75  (211)
283 d2blla1 c.2.1.2 (A:316-657) Po  39.6     8.1 0.00059   29.9   2.8   70   45-121     2-73  (342)
284 d1ojua1 c.2.1.5 (A:22-163) Mal  38.9      49  0.0036   22.0  11.1   38   45-84      2-39  (142)
285 d1vi2a1 c.2.1.7 (A:107-288) Pu  38.9      55   0.004   22.5   9.6   82   41-126    16-101 (182)
286 d1e7wa_ c.2.1.2 (A:) Dihydropt  38.7      67  0.0048   23.4   8.3   40   50-92      9-49  (284)
287 d1i3ca_ c.23.1.1 (A:) Response  38.3      49  0.0036   21.8  10.7   55   69-123     2-64  (144)
288 d1dxya1 c.2.1.4 (A:101-299) D-  38.3      22  0.0016   25.4   4.9  106   42-189    44-150 (199)
289 d1gesa2 c.3.1.5 (A:147-262) Gl  38.3      29  0.0021   22.0   5.2   52   42-97     20-79  (116)
290 d1gqoa_ c.23.13.1 (A:) Type II  38.0     4.8 0.00035   27.6   1.0   60   63-124    13-75  (141)
291 d1j4aa1 c.2.1.4 (A:104-300) D-  37.8      11 0.00083   27.1   3.2  106   42-189    42-149 (197)
292 d1peya_ c.23.1.1 (A:) Sporulat  37.6      45  0.0033   21.1   9.7   50   72-122     3-52  (119)
293 d3grsa2 c.3.1.5 (A:166-290) Gl  37.2      32  0.0023   22.2   5.3   52   42-97     21-80  (125)
294 d1sc6a1 c.2.1.4 (A:108-295) Ph  37.2      61  0.0044   22.5   7.5  106   42-189    43-149 (188)
295 d1jzta_ c.104.1.1 (A:) Hypothe  36.8      45  0.0033   24.5   6.7   25   53-77     67-91  (243)
296 d1gpja2 c.2.1.7 (A:144-302) Gl  36.7      57  0.0041   22.0   9.5   70   41-122    22-91  (159)
297 d1s8na_ c.23.1.1 (A:) Probable  36.2      21  0.0015   25.0   4.5   51   72-122     5-55  (190)
298 d1uqra_ c.23.13.1 (A:) Type II  35.9     6.8 0.00049   27.0   1.5   60   63-124    14-76  (146)
299 d2oo3a1 c.66.1.59 (A:9-279) Un  35.2      26  0.0019   26.6   5.0   39  115-174   228-266 (271)
300 d2jfga1 c.5.1.1 (A:1-93) UDP-N  35.1      12 0.00088   23.0   2.6   71   42-125     4-74  (93)
301 d2ayxa1 c.23.1.1 (A:817-949) S  35.1      53  0.0039   21.2  10.2   53   69-122     7-59  (133)
302 d2i76a2 c.2.1.6 (A:2-154) Hypo  34.3      30  0.0022   22.9   4.9   59   52-124     6-64  (153)
303 d1djqa2 c.3.1.1 (A:490-645) Tr  32.6      26  0.0019   23.4   4.4   54   41-96     37-98  (156)
304 d1kyqa1 c.2.1.11 (A:1-150) Bif  32.6      25  0.0018   23.5   4.3   46   41-88     11-56  (150)
305 d1o8ca2 c.2.1.1 (A:116-192) Hy  32.2      33  0.0024   20.3   4.2   43   41-88     30-74  (77)
306 d1i0za1 c.2.1.5 (A:1-160) Lact  32.1      70  0.0051   21.7  13.1   40   42-83     19-58  (160)
307 d2q46a1 c.2.1.2 (A:2-253) Hypo  31.9      14   0.001   26.2   2.9   71   44-122     4-75  (252)
308 d1h6va2 c.3.1.5 (A:171-292) Ma  31.8      29  0.0021   22.4   4.3   52   42-97     19-77  (122)
309 d1lvla2 c.3.1.5 (A:151-265) Di  31.6      43  0.0032   21.0   5.2   52   42-97     20-79  (115)
310 d2r25b1 c.23.1.1 (B:1087-1214)  31.3      61  0.0045   20.8  11.7   51   72-122     3-58  (128)
311 d2c5aa1 c.2.1.2 (A:13-375) GDP  30.8      27  0.0019   26.9   4.7   71   42-121    14-85  (363)
312 d1ojta2 c.3.1.5 (A:276-400) Di  30.6      21  0.0015   23.3   3.4   52   41-96     24-83  (125)
313 d1nhpa2 c.3.1.5 (A:120-242) NA  30.5      55   0.004   20.8   5.7   51   41-95     28-87  (123)
314 d1t5la2 c.37.1.19 (A:415-595)   30.4      13 0.00096   26.3   2.4   50  152-201    17-66  (181)
315 d1u8xx1 c.2.1.5 (X:3-169) Malt  30.4      77  0.0056   21.6   9.3   76   42-122     2-84  (167)
316 d1dbwa_ c.23.1.1 (A:) Transcri  30.4      62  0.0045   20.5  11.9   97   70-192     3-99  (123)
317 d1yo6a1 c.2.1.2 (A:1-250) Puta  30.3      42   0.003   24.4   5.5   79   43-125     3-91  (250)
318 d1nvmb1 c.2.1.3 (B:1-131,B:287  29.3      43  0.0031   22.8   5.0   71   43-122     4-78  (157)
319 d2ahra2 c.2.1.6 (A:1-152) Pyrr  29.3      73  0.0053   21.0   8.3   58   52-122     7-64  (152)
320 d1tdja1 c.79.1.1 (A:5-335) Thr  29.2      51  0.0037   25.1   6.1   36   44-80    177-212 (331)
321 d1mxha_ c.2.1.2 (A:) Dihydropt  29.2      93  0.0068   22.2   8.1   75   47-124     5-93  (266)
322 d1oy0a_ c.1.12.8 (A:) Ketopant  28.8      38  0.0028   25.4   5.0   63  115-197    77-139 (262)
323 d3lada2 c.3.1.5 (A:159-277) Di  28.3      29  0.0021   22.2   3.8   51   42-96     21-79  (119)
324 d1leha1 c.2.1.7 (A:135-364) Le  28.2      37  0.0027   24.9   4.7   44   41-88     37-80  (230)
325 d1dhra_ c.2.1.2 (A:) Dihydropt  28.1      38  0.0027   24.5   4.9   36   42-80      1-36  (236)
326 d1s2ma2 c.37.1.19 (A:252-422)   28.1      82  0.0059   21.2  12.6  122   42-193    31-155 (171)
327 d1ep3b2 c.25.1.3 (B:103-262) D  27.8      55   0.004   21.8   5.5   39   42-80      7-46  (160)
328 d1db3a_ c.2.1.2 (A:) GDP-manno  27.7      19  0.0014   28.0   3.2   75   45-122     3-85  (357)
329 d1obba1 c.2.1.5 (A:2-172) Alph  27.7      85  0.0062   21.3   7.3   76   42-122     1-83  (171)
330 d2iida1 c.3.1.2 (A:4-319,A:433  27.3      39  0.0029   24.8   5.0   51   24-80     13-63  (370)
331 d1ny5a1 c.23.1.1 (A:1-137) Tra  27.3      75  0.0055   20.5  11.5   50   72-122     2-51  (137)
332 d1tlta1 c.2.1.3 (A:5-127,A:268  26.8      83   0.006   20.9   8.6   39   45-87      3-44  (164)
333 d1cjca2 c.4.1.1 (A:6-106,A:332  26.7      24  0.0018   25.1   3.5   36   44-81      2-37  (230)
334 d1seza1 c.3.1.2 (A:13-329,A:44  26.6      32  0.0023   24.8   4.3   34   43-80      1-34  (373)
335 d1p2fa2 c.23.1.1 (A:1-120) Res  26.0      45  0.0032   21.2   4.4   47   72-122     4-50  (120)
336 d1ek6a_ c.2.1.2 (A:) Uridine d  25.5      25  0.0018   26.8   3.5   72   44-121     3-87  (346)
337 d1jtva_ c.2.1.2 (A:) Human est  25.4 1.2E+02  0.0088   22.3  10.8   84   44-128     2-96  (285)
338 d1dcja_ d.68.3.3 (A:) SirA {Es  25.4      62  0.0045   19.0   7.1   43  156-198    26-68  (81)
339 d1zmta1 c.2.1.2 (A:2-253) Halo  25.3      18  0.0013   26.8   2.4   76   46-125     3-81  (252)
340 d1uxja1 c.2.1.5 (A:2-143) Mala  25.2      86  0.0063   20.5  11.3   37   45-84      3-39  (142)
341 d1krwa_ c.23.1.1 (A:) NTRC rec  25.2      77  0.0056   20.0  11.4   51   71-122     4-54  (123)
342 d1mo9a2 c.3.1.5 (A:193-313) NA  25.2      74  0.0054   19.8   5.6   52   41-96     20-79  (121)
343 d2b4aa1 c.23.1.1 (A:2-119) Hyp  25.1      77  0.0056   19.9   8.4   51   71-122     3-54  (118)
344 d1ve1a1 c.79.1.1 (A:1-302) O-a  24.6      70  0.0051   23.8   6.1   34   46-79    169-202 (302)
345 d2dw4a2 c.3.1.2 (A:274-654,A:7  24.3      34  0.0025   25.2   4.1   37   40-80      2-38  (449)
346 d1gc0a_ c.67.1.3 (A:) Methioni  24.1 1.6E+02   0.011   23.1  11.7  123   24-177    60-184 (392)
347 d1gtza_ c.23.13.1 (A:) Type II  24.0     5.2 0.00038   27.7  -0.9   60   63-124    18-80  (149)
348 d1feca2 c.3.1.5 (A:170-286) Tr  23.2      75  0.0054   19.7   5.2   53   42-96     17-78  (117)
349 d1rkxa_ c.2.1.2 (A:) CDP-gluco  23.1      43  0.0031   25.4   4.5   76   42-121     7-85  (356)
350 d1hyha1 c.2.1.5 (A:21-166) L-2  23.0      99  0.0072   20.4  12.6   71   44-122     2-76  (146)
351 d1y6ja1 c.2.1.5 (A:7-148) Lact  22.8      98  0.0071   20.3   7.6   37   45-83      3-39  (142)
352 d2pl1a1 c.23.1.1 (A:1-119) Pho  22.7      86  0.0063   19.6  11.4   50   72-122     2-51  (119)
353 d1aoga2 c.3.1.5 (A:170-286) Tr  22.6      85  0.0062   19.5   5.7   55   41-97     18-81  (117)
354 d1d2fa_ c.67.1.3 (A:) Modulato  22.2   1E+02  0.0075   23.2   6.8   57   68-127    80-145 (361)
355 d1guza1 c.2.1.5 (A:1-142) Mala  21.9   1E+02  0.0073   20.1  10.2   39   45-85      2-40  (142)
356 d1n1ea2 c.2.1.6 (A:9-197) Glyc  21.5      57  0.0042   22.7   4.6   41   44-88      8-48  (189)
357 d2c4va1 c.23.13.1 (A:1-158) Ty  21.1      14   0.001   25.7   0.9   60   63-124    13-78  (158)
358 d1uzma1 c.2.1.2 (A:9-245) beta  21.1      53  0.0039   23.7   4.5   72   40-125     4-83  (237)
359 d1iiba_ c.44.2.1 (A:) Enzyme I  21.0      78  0.0057   19.7   4.7   35   88-124    23-57  (103)
360 d1z45a2 c.2.1.2 (A:11-357) Uri  20.9      40  0.0029   25.7   3.9   71   49-121     6-80  (347)
361 d2gv8a1 c.3.1.5 (A:3-180,A:288  20.9      41   0.003   25.5   3.9   37   43-81      4-40  (335)
362 d1v93a_ c.1.23.1 (A:) Methylen  20.5 1.6E+02   0.011   21.8  11.6   50   55-104    58-110 (292)
363 d1ne9a1 d.108.1.4 (A:1-164) Pe  20.5 1.2E+02  0.0087   20.4   6.4   47  149-195    84-130 (164)
364 d1d7ya2 c.3.1.5 (A:116-236) NA  20.4      37  0.0027   21.8   3.0   54   17-81     11-64  (121)
365 d1jbqa_ c.79.1.1 (A:) Cystathi  20.4      79  0.0057   24.3   5.7   36   45-80    207-242 (355)
366 d1dz3a_ c.23.1.1 (A:) Sporulat  20.3      98  0.0072   19.4  11.6   51   72-122     3-54  (123)
367 d2cvoa1 c.2.1.3 (A:68-218,A:38  20.1      57  0.0041   22.6   4.3   35   42-78      4-38  (183)

No 1  
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=99.97  E-value=3.9e-31  Score=218.98  Aligned_cols=187  Identities=22%  Similarity=0.323  Sum_probs=163.9

Q ss_pred             eeeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211           10 LVSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT   89 (256)
Q Consensus        10 ~~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~   89 (256)
                      .|.+.|+||+||++|+.++++++..+.    ..+.+|||+|||+|++++.++..    .|++.|+|+|+|+.+++.|++|
T Consensus        80 ~~~v~~~VlIPRpeTE~lv~~~l~~~~----~~~~~vlDlGtGSG~I~i~la~~----~p~~~v~avDis~~Al~~A~~N  151 (274)
T d2b3ta1          80 PLFVSPATLIPRPDTECLVEQALARLP----EQPCRILDLGTGTGAIALALASE----RPDCEIIAVDRMPDAVSLAQRN  151 (274)
T ss_dssp             EEECCTTSCCCCTTHHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHH----CTTSEEEEECSSHHHHHHHHHH
T ss_pred             EEEEeccccccccchhhhhhhHhhhhc----ccccceeeeehhhhHHHHHHHhh----CCcceeeeccchhHHHhHHHHH
Confidence            378999999999999999999888764    46788999999999999998887    7899999999999999999999


Q ss_pred             HHHcCCcc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCC----cccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211           90 LEAHNVHA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPE----DEVGREGIASAWAGGENGRAVIDKILPSADKLLS  164 (256)
Q Consensus        90 ~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk  164 (256)
                      +..++++. +++++|+.+...   ..+||+|++||||.+..+    .++...++..++.+|.+|...+..++..+.++|+
T Consensus       152 a~~~~~~~v~~~~~d~~~~~~---~~~fDlIvsNPPYi~~~~~~~~~~v~~~eP~~AL~~g~dGl~~~~~i~~~a~~~L~  228 (274)
T d2b3ta1         152 AQHLAIKNIHILQSDWFSALA---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV  228 (274)
T ss_dssp             HHHHTCCSEEEECCSTTGGGT---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE
T ss_pred             HHHhCcccceeeecccccccC---CCceeEEEecchhhhhhhhcccccccccchhhhcccccccchHHHHHHHHHHHhcC
Confidence            99999864 999999887643   368999999999998775    3456788899999999999999999999999999


Q ss_pred             cCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecCCCCccEEE
Q 025211          165 KRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRSTEEENLHI  208 (256)
Q Consensus       165 pgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l  208 (256)
                      |||.+++ ..+..+...+.+.+.+.||..+.+.....+.+++.+
T Consensus       229 ~~G~l~l-Eig~~q~~~v~~~l~~~gf~~i~~~kDl~g~~R~v~  271 (274)
T d2b3ta1         229 SGGFLLL-EHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTL  271 (274)
T ss_dssp             EEEEEEE-ECCSSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEE
T ss_pred             CCCEEEE-EECchHHHHHHHHHHHCCCCeEEEEECCCCCceEEE
Confidence            9999999 456777889999999999987778888777777543


No 2  
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
Probab=99.95  E-value=4.7e-27  Score=193.84  Aligned_cols=182  Identities=18%  Similarity=0.246  Sum_probs=148.5

Q ss_pred             eeeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211           10 LVSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT   89 (256)
Q Consensus        10 ~~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~   89 (256)
                      .|.+.+++|+||++|+.+++++++.+..   .+..+|+|+|||+|++++.+++     .|+++|+++|+|+++++.|++|
T Consensus        81 ~f~v~~~vlIPRpeTE~lv~~~~~~~~~---~~~~~vld~g~GsG~i~~~la~-----~~~~~v~a~Dis~~Al~~A~~N  152 (271)
T d1nv8a_          81 SFLVEEGVFVPRPETEELVELALELIRK---YGIKTVADIGTGSGAIGVSVAK-----FSDAIVFATDVSSKAVEIARKN  152 (271)
T ss_dssp             EEECCTTSCCCCTTHHHHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHH-----HSSCEEEEEESCHHHHHHHHHH
T ss_pred             EEEEecCccCchhhhhhhhhhhhhhhcc---ccccEEEEeeeeeehhhhhhhh-----cccceeeechhhhhHHHHHHHH
Confidence            4779999999999999999999887643   3567999999999999988775     3788999999999999999999


Q ss_pred             HHHcCCcc--eEEEcchhhchhhhcCCCccEEEECCCCCCCCCc--ccccccchhhhcCCCCcHHHHHHHHHHHhhcccc
Q 025211           90 LEAHNVHA--DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPED--EVGREGIASAWAGGENGRAVIDKILPSADKLLSK  165 (256)
Q Consensus        90 ~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp  165 (256)
                      +..+++..  .++.+|+.+.... ..++||+|++||||......  .....+|..++.+|.+|+..+..++.   ++|+|
T Consensus       153 a~~~~~~~~~~i~~~~~~~~~~~-~~~~fDlIVsNPPYI~~~~~l~~~~~~EP~~AL~gg~dGl~~~r~i~~---~~L~~  228 (271)
T d1nv8a_         153 AERHGVSDRFFVRKGEFLEPFKE-KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFG---RYDTS  228 (271)
T ss_dssp             HHHTTCTTSEEEEESSTTGGGGG-GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHH---HCCCT
T ss_pred             HHHcCCCceeEEeeccccccccc-ccCcccEEEEcccccCcccccceeeeeccccccccccchHHHHHHHHH---HhcCC
Confidence            99999866  6788888876543 24789999999999975532  33458899999999999988888764   68999


Q ss_pred             CeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecCCCCccEEEE
Q 025211          166 RGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRSTEEENLHII  209 (256)
Q Consensus       166 gG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~  209 (256)
                      ||++++ ..+..+.+.+.+.+.+.||     +....+.+++.++
T Consensus       229 ~G~l~~-Eig~~Q~~~v~~l~~~~g~-----~kDl~g~~R~~~~  266 (271)
T d1nv8a_         229 GKIVLM-EIGEDQVEELKKIVSDTVF-----LKDSAGKYRFLLL  266 (271)
T ss_dssp             TCEEEE-ECCTTCHHHHTTTSTTCEE-----EECTTSSEEEEEE
T ss_pred             CCEEEE-EECHHHHHHHHHHHHhCCE-----EeccCCCcEEEEE
Confidence            999888 5567888888888877665     4555666665544


No 3  
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=4.7e-23  Score=168.67  Aligned_cols=188  Identities=13%  Similarity=0.170  Sum_probs=129.1

Q ss_pred             ccceeeeccCCccccCCchHHHHHHHHHhh-ccc--ccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHH
Q 025211            6 AQIRLVSSHPEVYEPCDDSFALVDALLADR-INL--VEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYA   82 (256)
Q Consensus         6 ~~~~~~~~~~~~~~p~~~~~~l~~~l~~~~-~~~--~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~   82 (256)
                      +++ .+.+.+++++||++++..+...+..+ ...  ...+..+|||+|||+|++++.++..    .|+++++|+|+++++
T Consensus        23 ~gl-~~~v~~~~LiPr~~~r~~~~~~i~~l~~~~~~~~~~~~~~LDiGtGsg~I~~~l~~~----~~~~~~~~~Di~~~a   97 (250)
T d2h00a1          23 FGL-SIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGAT----LNGWYFLATEVDDMC   97 (250)
T ss_dssp             HCC-CCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHH----HHCCEEEEEESCHHH
T ss_pred             cCc-eEEeCCCeecCCCCCHHHHHHHHHHHhhhhccCccccceEEEeCCCchHHHHHHHHh----CCCccccceecCHHH
Confidence            455 48899999999999777665544443 221  1235579999999999999888887    578999999999999


Q ss_pred             HHHHHHHHHHcCCcc--eEEEcchhhch----hhhcCCCccEEEECCCCCCCCCccc-------ccccchhhhcCCCCc-
Q 025211           83 VEVTRKTLEAHNVHA--DLINTDIASGL----EKRLAGLVDVMVVNPPYVPTPEDEV-------GREGIASAWAGGENG-  148 (256)
Q Consensus        83 i~~a~~~~~~~~~~~--~~~~~d~~~~~----~~~~~~~fD~Ii~npP~~~~~~~~~-------~~~~~~~~~~~~~~~-  148 (256)
                      ++.|++|++.|++..  .+.+.+..+..    ....+++||+|+|||||+...+...       ....+.....++... 
T Consensus        98 l~~A~~N~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~~~fD~ivsNPPY~~~~e~~~~~~~~k~~~~~p~~~~~~~~~el  177 (250)
T d2h00a1          98 FNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEI  177 (250)
T ss_dssp             HHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTT
T ss_pred             HHHHHHHHHHhCCCcceeeeeeccHHhhhhhhhhcccCceeEEEecCcccccchhhhccccccccccCchhhcCcccccc
Confidence            999999999999876  55555443322    2223568999999999997654321       122334444443322 


Q ss_pred             ------HHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211          149 ------RAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ  198 (256)
Q Consensus       149 ------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  198 (256)
                            ..++..++++...+++..|++.+.........++.+.+++.|+....+..
T Consensus       178 ~~~gGe~~F~~~ii~es~~~~~~~g~~t~~ig~~~~l~~i~~~L~~~g~~~i~~ie  233 (250)
T d2h00a1         178 MAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTE  233 (250)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEE
T ss_pred             ccccchhhHHHHHHHHHHHHhhcCcEEEEEecchhhHHHHHHHHHHcCCCeEEEEE
Confidence                  23678889999999999999876555556678899999999987544443


No 4  
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.86  E-value=5.3e-21  Score=150.83  Aligned_cols=143  Identities=20%  Similarity=0.377  Sum_probs=107.8

Q ss_pred             eeccCCccccCC-c--hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHH
Q 025211           11 VSSHPEVYEPCD-D--SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTR   87 (256)
Q Consensus        11 ~~~~~~~~~p~~-~--~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~   87 (256)
                      +...+++|.+.. |  ++++++    .+.   ..++++|||+|||+|.+++.++..    .  .+|+++|+|+.+++.|+
T Consensus        25 ~~t~~gvF~~~~~d~~t~lLi~----~l~---~~~~~~VLDiGcG~G~~~~~la~~----~--~~v~~iD~s~~~i~~a~   91 (194)
T d1dusa_          25 FKTDSGVFSYGKVDKGTKILVE----NVV---VDKDDDILDLGCGYGVIGIALADE----V--KSTTMADINRRAIKLAK   91 (194)
T ss_dssp             EEEETTSTTTTSCCHHHHHHHH----HCC---CCTTCEEEEETCTTSHHHHHHGGG----S--SEEEEEESCHHHHHHHH
T ss_pred             EEcCCCccCCCCcCHHHHHHHH----hCC---cCCCCeEEEEeecCChhHHHHHhh----c--cccceeeeccccchhHH
Confidence            556788876643 2  444444    332   357899999999999998877664    3  38999999999999999


Q ss_pred             HHHHHcCCcc---eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211           88 KTLEAHNVHA---DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS  164 (256)
Q Consensus        88 ~~~~~~~~~~---~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk  164 (256)
                      +|+..+++..   ++..+|+.+...   +++||+|++||||+..                    .+....+++.+.++||
T Consensus        92 ~n~~~~~l~~~~i~~~~~d~~~~~~---~~~fD~Ii~~~p~~~~--------------------~~~~~~~l~~~~~~Lk  148 (194)
T d1dusa_          92 ENIKLNNLDNYDIRVVHSDLYENVK---DRKYNKIITNPPIRAG--------------------KEVLHRIIEEGKELLK  148 (194)
T ss_dssp             HHHHHTTCTTSCEEEEECSTTTTCT---TSCEEEEEECCCSTTC--------------------HHHHHHHHHHHHHHEE
T ss_pred             HHHHHhCCccceEEEEEcchhhhhc---cCCceEEEEcccEEec--------------------chhhhhHHHHHHHhcC
Confidence            9999998754   788899876432   4789999999998632                    2335788999999999


Q ss_pred             cCeEEEEEEeCCCCHHHHHHHHHHc
Q 025211          165 KRGWLYLVTLTANDPSQICLQMMEK  189 (256)
Q Consensus       165 pgG~l~~~~~~~~~~~~~~~~~~~~  189 (256)
                      |||+++++.........+...+.+.
T Consensus       149 pgG~l~i~~~~~~~~~~~~~~l~~~  173 (194)
T d1dusa_         149 DNGEIWVVIQTKQGAKSLAKYMKDV  173 (194)
T ss_dssp             EEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred             cCcEEEEEEeCcCCHHHHHHHHHHh
Confidence            9999988766554444555555554


No 5  
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}
Probab=99.86  E-value=9e-21  Score=155.01  Aligned_cols=137  Identities=16%  Similarity=0.238  Sum_probs=113.5

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD  103 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d  103 (256)
                      |.++++++....     +++++|||+|||+|.+++.+++.      +++|+|+|+|+.+++.|++|+..++++.+++++|
T Consensus       107 T~l~l~~l~~~~-----~~g~~VLDiGcGsG~l~i~aa~~------g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d  175 (254)
T d2nxca1         107 TRLALKALARHL-----RPGDKVLDLGTGSGVLAIAAEKL------GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGS  175 (254)
T ss_dssp             HHHHHHHHHHHC-----CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESC
T ss_pred             hhHHHHHHHhhc-----CccCEEEEcccchhHHHHHHHhc------CCEEEEEECChHHHHHHHHHHHHcCCceeEEecc
Confidence            788888887764     58899999999999999877764      4589999999999999999999999988999999


Q ss_pred             hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHH
Q 025211          104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQIC  183 (256)
Q Consensus       104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~  183 (256)
                      +.+..+   .++||+|++|..+                        ..+..++..+.++|||||+++++..-.....++.
T Consensus       176 ~~~~~~---~~~fD~V~ani~~------------------------~~l~~l~~~~~~~LkpGG~lilSgil~~~~~~v~  228 (254)
T d2nxca1         176 LEAALP---FGPFDLLVANLYA------------------------ELHAALAPRYREALVPGGRALLTGILKDRAPLVR  228 (254)
T ss_dssp             HHHHGG---GCCEEEEEEECCH------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHH
T ss_pred             cccccc---ccccchhhhcccc------------------------ccHHHHHHHHHHhcCCCcEEEEEecchhhHHHHH
Confidence            876543   3789999998432                        2367888999999999999998655455677889


Q ss_pred             HHHHHcCCcEEEEEe
Q 025211          184 LQMMEKGYAARIVVQ  198 (256)
Q Consensus       184 ~~~~~~g~~~~~~~~  198 (256)
                      +.+.+.||.......
T Consensus       229 ~~~~~~Gf~~~~~~~  243 (254)
T d2nxca1         229 EAMAGAGFRPLEEAA  243 (254)
T ss_dssp             HHHHHTTCEEEEEEE
T ss_pred             HHHHHCCCEEEEEEE
Confidence            999999998755443


No 6  
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=99.82  E-value=1.4e-19  Score=141.59  Aligned_cols=140  Identities=21%  Similarity=0.258  Sum_probs=110.4

Q ss_pred             cCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-c-
Q 025211           20 PCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-A-   97 (256)
Q Consensus        20 p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~-   97 (256)
                      |.+..+.+-..++..+.   ..++.+|||+|||+|.+++.++..      ..+|+|+|+++.+++.|++|++.+++. . 
T Consensus        14 ~~~t~~eir~~il~~l~---~~~g~~VLDiGcGsG~~s~~lA~~------~~~V~avD~~~~~l~~a~~n~~~~gl~~~v   84 (186)
T d1l3ia_          14 PGPTAMEVRCLIMCLAE---PGKNDVAVDVGCGTGGVTLELAGR------VRRVYAIDRNPEAISTTEMNLQRHGLGDNV   84 (186)
T ss_dssp             CCCCCHHHHHHHHHHHC---CCTTCEEEEESCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHTTCCTTE
T ss_pred             CCCChHHHHHHHHHhcC---CCCCCEEEEEECCeEccccccccc------ceEEEEecCCHHHHHHHHHHHHHcCCCcce
Confidence            34445666666666654   368999999999999999887654      348999999999999999999999985 3 


Q ss_pred             eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211           98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN  177 (256)
Q Consensus        98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~  177 (256)
                      +++++|+.+...+  ...||+|+++.+..+                        ...+++.+.+.|||||++++......
T Consensus        85 ~~~~gda~~~~~~--~~~~D~v~~~~~~~~------------------------~~~~~~~~~~~LkpgG~lvi~~~~~e  138 (186)
T d1l3ia_          85 TLMEGDAPEALCK--IPDIDIAVVGGSGGE------------------------LQEILRIIKDKLKPGGRIIVTAILLE  138 (186)
T ss_dssp             EEEESCHHHHHTT--SCCEEEEEESCCTTC------------------------HHHHHHHHHHTEEEEEEEEEEECBHH
T ss_pred             EEEECchhhcccc--cCCcCEEEEeCcccc------------------------chHHHHHHHHHhCcCCEEEEEeeccc
Confidence            8999998877543  478999999866421                        46789999999999999998765555


Q ss_pred             CHHHHHHHHHHcCCcEE
Q 025211          178 DPSQICLQMMEKGYAAR  194 (256)
Q Consensus       178 ~~~~~~~~~~~~g~~~~  194 (256)
                      ....+.+.+.+.++...
T Consensus       139 ~~~~~~~~l~~~~~~~~  155 (186)
T d1l3ia_         139 TKFEAMECLRDLGFDVN  155 (186)
T ss_dssp             HHHHHHHHHHHTTCCCE
T ss_pred             cHHHHHHHHHHcCCCeE
Confidence            55677788888887644


No 7  
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}
Probab=99.79  E-value=8.2e-19  Score=141.34  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=87.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      +++.+|||+|||+|.++..+++.      +.+|+|+|+|+.+++.|++++...+.+. +++++|+.+.  ++.+++||+|
T Consensus        14 ~~~~rVLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l--~~~~~~fD~v   85 (231)
T d1vl5a_          14 KGNEEVLDVATGGGHVANAFAPF------VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM--PFTDERFHIV   85 (231)
T ss_dssp             CSCCEEEEETCTTCHHHHHHGGG------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC--CSCTTCEEEE
T ss_pred             CCcCEEEEecccCcHHHHHHHHh------CCEEEEEECCHHHHhhhhhcccccccccccccccccccc--cccccccccc
Confidence            67899999999999988776654      3589999999999999999999888765 8999998875  3456899999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      +|.-.+++.++                     ...++.++.++|||||++++...
T Consensus        86 ~~~~~l~~~~d---------------------~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          86 TCRIAAHHFPN---------------------PASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             EEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccCC---------------------HHHHHHHHHHhcCCCcEEEEEeC
Confidence            99766554433                     56889999999999999998654


No 8  
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}
Probab=99.79  E-value=7e-19  Score=142.34  Aligned_cols=106  Identities=16%  Similarity=0.197  Sum_probs=88.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      +++.+|||+|||+|.++..++..    +  .+|+|+|+|+.|++.|++++..++.++ .++++|+.+.  ++.+++||+|
T Consensus        15 ~~~~rILDiGcGtG~~~~~la~~----~--~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v   86 (234)
T d1xxla_          15 RAEHRVLDIGAGAGHTALAFSPY----V--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL--PFPDDSFDII   86 (234)
T ss_dssp             CTTCEEEEESCTTSHHHHHHGGG----S--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC--CSCTTCEEEE
T ss_pred             CCCCEEEEeCCcCcHHHHHHHHh----C--CeEEEEeCChhhhhhhhhhhcccccccccccccccccc--ccccccccee
Confidence            68999999999999998777664    2  489999999999999999999888765 9999999875  4457899999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                      +|.-.+.+.++                     ...+++++.++|||||+++++...
T Consensus        87 ~~~~~l~~~~d---------------------~~~~l~~~~r~LkpgG~~~~~~~~  121 (234)
T d1xxla_          87 TCRYAAHHFSD---------------------VRKAVREVARVLKQDGRFLLVDHY  121 (234)
T ss_dssp             EEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             eeeceeecccC---------------------HHHHHHHHHHeeCCCcEEEEEEcC
Confidence            99766544332                     578899999999999999986543


No 9  
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=99.78  E-value=1.9e-18  Score=133.12  Aligned_cols=128  Identities=21%  Similarity=0.229  Sum_probs=96.8

Q ss_pred             CCccccCCc--hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH
Q 025211           15 PEVYEPCDD--SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA   92 (256)
Q Consensus        15 ~~~~~p~~~--~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~   92 (256)
                      |...+|+++  .+.+++++..++     .++.+|||+|||+|.++++++..      ++.++++|+|+.+++.+++|++.
T Consensus        17 ~~~~Rpt~~~v~e~lf~~l~~~~-----~~g~~vLDl~~G~G~~~i~a~~~------ga~vv~vD~~~~a~~~~~~N~~~   85 (171)
T d1ws6a1          17 PASARPSPVRLRKALFDYLRLRY-----PRRGRFLDPFAGSGAVGLEAASE------GWEAVLVEKDPEAVRLLKENVRR   85 (171)
T ss_dssp             CTTCCCCCHHHHHHHHHHHHHHC-----TTCCEEEEETCSSCHHHHHHHHT------TCEEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHHHHHhhccc-----cCCCeEEEeccccchhhhhhhhc------cchhhhcccCHHHHhhhhHHHHh
Confidence            566788887  567777777664     36889999999999999887765      46899999999999999999999


Q ss_pred             cCCcceEEEcchhhchh--hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211           93 HNVHADLINTDIASGLE--KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY  170 (256)
Q Consensus        93 ~~~~~~~~~~d~~~~~~--~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  170 (256)
                      +++..+++..+......  .....+||+|++||||...-.                   .....++.  ..+|+|||+++
T Consensus        86 ~~~~~~v~~~~~d~~~~~~~~~~~~fD~If~DPPY~~~~~-------------------~~l~~l~~--~~ll~~~g~iv  144 (171)
T d1ws6a1          86 TGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLA-------------------ALFGELLA--SGLVEAGGLYV  144 (171)
T ss_dssp             HTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTTSCTT-------------------HHHHHHHH--HTCEEEEEEEE
T ss_pred             hccccceeeeehhcccccccccCCccceeEEccccccCHH-------------------HHHHHHHH--cCCcCCCeEEE
Confidence            99887777777654432  234578999999999953111                   12333333  35899999998


Q ss_pred             EEEe
Q 025211          171 LVTL  174 (256)
Q Consensus       171 ~~~~  174 (256)
                      +.++
T Consensus       145 ie~~  148 (171)
T d1ws6a1         145 LQHP  148 (171)
T ss_dssp             EEEE
T ss_pred             EEec
Confidence            8554


No 10 
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}
Probab=99.77  E-value=1.2e-17  Score=134.16  Aligned_cols=109  Identities=19%  Similarity=0.215  Sum_probs=87.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      +++.+|||+|||+|..+..+++.+.  .|+++|+|+|+|+.|++.|++++...+...  .+..+|+.+.    ....+|+
T Consensus        38 ~~~~~vLDlGCGtG~~~~~l~~~~~--~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~----~~~~~d~  111 (225)
T d1im8a_          38 TADSNVYDLGCSRGAATLSARRNIN--QPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV----EIKNASM  111 (225)
T ss_dssp             CTTCEEEEESCTTCHHHHHHHHTCC--CSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC----CCCSEEE
T ss_pred             CCCCEEEEeccchhhHHHHHHHhhc--CCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc----cccccee
Confidence            5789999999999999988887643  468899999999999999999988766554  6677777654    2368899


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      |+++--+++.+..+                   ...+++++++.|||||.+++.+.
T Consensus       112 i~~~~~l~~~~~~d-------------------~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         112 VILNFTLQFLPPED-------------------RIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             EEEESCGGGSCGGG-------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEeeeccccChhh-------------------HHHHHHHHHHhCCCCceeecccc
Confidence            99975554433222                   57899999999999999999754


No 11 
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
Probab=99.77  E-value=4.9e-18  Score=138.28  Aligned_cols=139  Identities=14%  Similarity=0.062  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEE
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLIN  101 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~  101 (256)
                      +...++.+.+.+.   -.++.+|||+|||+|.++..+++.    . ++.|+|+|+|+.+++.|+++....++..  +++.
T Consensus        18 ~~~~~~~l~~~~~---l~pg~~VLDiGCG~G~~~~~la~~----~-~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~   89 (245)
T d1nkva_          18 TEEKYATLGRVLR---MKPGTRILDLGSGSGEMLCTWARD----H-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH   89 (245)
T ss_dssp             CHHHHHHHHHHTC---CCTTCEEEEETCTTCHHHHHHHHH----T-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred             CHHHHHHHHHHcC---CCCCCEEEEEcCCCCHHHHHHHHh----c-CCEEEEEecccchhhHHHHHHHHhhccccchhhh
Confidence            4555666666654   258899999999999988877765    3 4799999999999999999999998864  8999


Q ss_pred             cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----
Q 025211          102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-----  176 (256)
Q Consensus       102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----  176 (256)
                      +|+.+..   .+++||+|++.-.+++.++                     ...++.++.++|||||++++..+..     
T Consensus        90 ~d~~~~~---~~~~fD~v~~~~~~~~~~d---------------------~~~~l~~~~r~LkPGG~l~i~~~~~~~~~~  145 (245)
T d1nkva_          90 NDAAGYV---ANEKCDVAACVGATWIAGG---------------------FAGAEELLAQSLKPGGIMLIGEPYWRQLPA  145 (245)
T ss_dssp             SCCTTCC---CSSCEEEEEEESCGGGTSS---------------------SHHHHHHHTTSEEEEEEEEEEEEEETTCCS
T ss_pred             hHHhhcc---ccCceeEEEEEehhhccCC---------------------HHHHHHHHHHHcCcCcEEEEEeccccCCCC
Confidence            9998863   3578999999654443332                     4688999999999999999966421     


Q ss_pred             ----------------CCHHHHHHHHHHcCCcEE
Q 025211          177 ----------------NDPSQICLQMMEKGYAAR  194 (256)
Q Consensus       177 ----------------~~~~~~~~~~~~~g~~~~  194 (256)
                                      .........+.+.||...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG~~~v  179 (245)
T d1nkva_         146 TEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVV  179 (245)
T ss_dssp             SHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCC
T ss_pred             hHHHHHHhccCCCcccCCHHHHHHHHHHcCCEEE
Confidence                            123356666777777643


No 12 
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}
Probab=99.76  E-value=1.1e-17  Score=138.96  Aligned_cols=106  Identities=13%  Similarity=0.162  Sum_probs=88.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      .++.+|||+|||+|.++..+++.     .+++|+|+|+++.+++.|+++....++..  +++++|+.+.  ++.+++||+
T Consensus        66 ~~~~~vLDiGcG~G~~~~~la~~-----~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l--~~~~~sfD~  138 (282)
T d2o57a1          66 QRQAKGLDLGAGYGGAARFLVRK-----FGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI--PCEDNSYDF  138 (282)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHH-----HCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC--SSCTTCEEE
T ss_pred             CCCCEEEEeCCCCcHHHhhhhcc-----CCcEEEEEeccchhhhhhhcccccccccccccccccccccc--cccccccch
Confidence            57899999999999998888775     25689999999999999999999888764  8999999886  445689999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      |++.-.+.+.++                     ...++.++.++|||||++++..+
T Consensus       139 V~~~~~l~h~~d---------------------~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         139 IWSQDAFLHSPD---------------------KLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             EEEESCGGGCSC---------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhccchhhhccC---------------------HHHHHHHHHHhcCCCcEEEEEEe
Confidence            999766544433                     46889999999999999998654


No 13 
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.76  E-value=3.6e-18  Score=136.71  Aligned_cols=107  Identities=13%  Similarity=0.189  Sum_probs=86.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      +++.+|||+|||+|.++..+++.      +++|+|+|+|++|++.|+++....+....++.+|+.+.  ++.+++||+|+
T Consensus        36 ~~~~~ILDiGcG~G~~~~~la~~------~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l--~~~~~~fD~I~  107 (226)
T d1ve3a1          36 KKRGKVLDLACGVGGFSFLLEDY------GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL--SFEDKTFDYVI  107 (226)
T ss_dssp             CSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC--CSCTTCEEEEE
T ss_pred             CCCCEEEEECCCcchhhhhHhhh------hcccccccccccchhhhhhhhccccccccccccccccc--cccCcCceEEE
Confidence            36789999999999998888764      56899999999999999999887776678888998875  34468999999


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      |.-.+.+.+.                   .....+++.+.++|||||++++...
T Consensus       108 ~~~~l~~~~~-------------------~d~~~~l~~i~~~LkpgG~lii~~~  142 (226)
T d1ve3a1         108 FIDSIVHFEP-------------------LELNQVFKEVRRVLKPSGKFIMYFT  142 (226)
T ss_dssp             EESCGGGCCH-------------------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EecchhhCCh-------------------hHHHHHHHHHHHHcCcCcEEEEEEc
Confidence            9654443221                   1256889999999999999988654


No 14 
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.75  E-value=3.2e-18  Score=139.16  Aligned_cols=123  Identities=12%  Similarity=0.118  Sum_probs=102.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-Ccc-eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-VHA-DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      +++.+|||+|||+|.++..+++.+   .+++.|+++|.++++++.|++|+..++ ..+ ++..+|+.+...   ++.||.
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v---~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~---~~~fD~  157 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYAL---NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS---DQMYDA  157 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHH---TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC---SCCEEE
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHh---CCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccc---cceeee
Confidence            689999999999999999999876   366799999999999999999998764 333 899999887643   478999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEE
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARI  195 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~  195 (256)
                      |+++.|-                          ...++..+.+.|||||++++..+...+...+...+++.||....
T Consensus       158 V~ld~p~--------------------------p~~~l~~~~~~LKpGG~lv~~~P~i~Qv~~~~~~l~~~gf~~i~  208 (250)
T d1yb2a1         158 VIADIPD--------------------------PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLE  208 (250)
T ss_dssp             EEECCSC--------------------------GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEE
T ss_pred             eeecCCc--------------------------hHHHHHHHHHhcCCCceEEEEeCCcChHHHHHHHHHHCCCceeE
Confidence            9998762                          23568999999999999999888766667777888888887544


No 15 
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75  E-value=4.8e-18  Score=136.31  Aligned_cols=134  Identities=12%  Similarity=0.093  Sum_probs=103.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      .++.+|||+|||+|.++..++..    .+ .+|+|+|+|++|++.|++++...+... +++++|+.+..  +.+++||+|
T Consensus        59 ~~~~~vLDiGcG~G~~~~~l~~~----~~-~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~--~~~~~fD~I  131 (222)
T d2ex4a1          59 TGTSCALDCGAGIGRITKRLLLP----LF-REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--PEPDSYDVI  131 (222)
T ss_dssp             CCCSEEEEETCTTTHHHHHTTTT----TC-SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC--CCSSCEEEE
T ss_pred             CCCCEEEEeccCCCHhhHHHHHh----cC-CEEEEeecCHHHhhccccccccccccccccccccccccc--ccccccccc
Confidence            46789999999999976554332    33 489999999999999999988776655 89999998863  346899999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC--------------CHHHHHHH
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN--------------DPSQICLQ  185 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------~~~~~~~~  185 (256)
                      ++...+++.++++                   ...++..+.++|||||.+++......              ..+++.+.
T Consensus       132 ~~~~~l~h~~~~~-------------------~~~~l~~i~~~Lk~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l  192 (222)
T d2ex4a1         132 WIQWVIGHLTDQH-------------------LAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRI  192 (222)
T ss_dssp             EEESCGGGSCHHH-------------------HHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHH
T ss_pred             ccccccccchhhh-------------------hhhHHHHHHHhcCCcceEEEEEcccccccccccCCceeeCCHHHHHHH
Confidence            9976665544321                   46789999999999999999754222              35678899


Q ss_pred             HHHcCCcEEEEEecC
Q 025211          186 MMEKGYAARIVVQRS  200 (256)
Q Consensus       186 ~~~~g~~~~~~~~~~  200 (256)
                      +.+.||+.+......
T Consensus       193 ~~~aGf~ii~~~~q~  207 (222)
T d2ex4a1         193 ICSAGLSLLAEERQE  207 (222)
T ss_dssp             HHHTTCCEEEEEECC
T ss_pred             HHHcCCEEEEEEEeC
Confidence            999999887665443


No 16 
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}
Probab=99.75  E-value=1.8e-17  Score=130.93  Aligned_cols=138  Identities=16%  Similarity=0.168  Sum_probs=105.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      .++..|||||||+|..++.+|+.    +|+..++|+|+++.++..|.+++...++++ .++++|+......+.++++|.|
T Consensus        28 ~~~PlvLeIGcG~G~~~~~lA~~----~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v  103 (204)
T d2fcaa1          28 NDNPIHIEVGTGKGQFISGMAKQ----NPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRV  103 (204)
T ss_dssp             SCCCEEEEECCTTSHHHHHHHHH----CTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred             CCCceEEEEEecCcHHHHHHHHh----CCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhcc
Confidence            35568999999999999998888    899999999999999999999999999886 9999999876655567899999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEE
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARI  195 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~  195 (256)
                      +++.|-.....     +....++        +...++..++++|||||++++.+......+.....+.+.++....
T Consensus       104 ~i~fp~P~~k~-----~h~k~Rl--------~~~~~l~~~~r~LkpgG~l~i~TD~~~y~~~~~~~~~~~~~~~~~  166 (204)
T d2fcaa1         104 YLNFSDPWPKK-----RHEKRRL--------TYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTY  166 (204)
T ss_dssp             EEESCCCCCSG-----GGGGGST--------TSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred             ccccccccchh-----hhcchhh--------hHHHHHHHHHHhCCCCcEEEEEECChHHHHHHHHHHHHCCCcccc
Confidence            88654221111     1111111        136889999999999999999765444455667777777765433


No 17 
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}
Probab=99.74  E-value=1.6e-17  Score=140.10  Aligned_cols=142  Identities=16%  Similarity=0.156  Sum_probs=106.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhh--cCCCcc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKR--LAGLVD  117 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~--~~~~fD  117 (256)
                      .++++|||+|||+|.++++++..      +..|+++|+|+.+++.|++|+..|++.. +++++|+.+.....  ..++||
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a~g------~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLALG------FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFD  217 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHHHH------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred             hCCCeeeccCCCCcHHHHHHHhc------CCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCC
Confidence            36899999999999999887753      3589999999999999999999999875 89999998875432  357899


Q ss_pred             EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC-HH----HHHHHHHHcCCc
Q 025211          118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND-PS----QICLQMMEKGYA  192 (256)
Q Consensus       118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~----~~~~~~~~~g~~  192 (256)
                      +|++|||.+........            .....+..++..+.++|+|||++++++++... .+    .+.+.+...+..
T Consensus       218 ~Vi~DpP~~~~~~~~~~------------~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~~~~~~~f~~~v~~a~~~a~~~  285 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVE------------RAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRL  285 (318)
T ss_dssp             EEEECCCCSCCSTTSHH------------HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEcCCccccchHHHH------------HHHHHHHHHHHHHHHHcCCCCEEEEEeCCcccCHHHHHHHHHHHHHHcCCC
Confidence            99999998765443210            11234678899999999999999998876432 22    334445556666


Q ss_pred             EEEEEecC
Q 025211          193 ARIVVQRS  200 (256)
Q Consensus       193 ~~~~~~~~  200 (256)
                      ...+....
T Consensus       286 ~~~~~~~~  293 (318)
T d1wxxa2         286 LRVVEKRG  293 (318)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEecC
Confidence            65555443


No 18 
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.74  E-value=9.5e-18  Score=136.65  Aligned_cols=118  Identities=13%  Similarity=0.143  Sum_probs=90.2

Q ss_pred             HHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh
Q 025211           30 ALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE  109 (256)
Q Consensus        30 ~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~  109 (256)
                      .+...+......++++|||+|||+|..++.+++.      ++.|+|+|+|++|++.|++++...+.+..++++|+.+...
T Consensus        29 ~~~~~~~~~~~~~~~~iLDiGcGtG~~~~~l~~~------~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~  102 (251)
T d1wzna1          29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAER------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF  102 (251)
T ss_dssp             HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC
T ss_pred             HHHHHHHHhcCCCCCEEEEeCCCCCccchhhccc------ceEEEEEeeccccccccccccccccccchheehhhhhccc
Confidence            3333333333467789999999999998887765      4589999999999999999999888888999999988632


Q ss_pred             hhcCCCccEEEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211          110 KRLAGLVDVMVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus       110 ~~~~~~fD~Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                         +++||+|+|.. .+.+.+                   ......+|+++.++|||||++++..+.
T Consensus       103 ---~~~fD~I~~~~~~~~~~~-------------------~~~~~~~L~~~~~~LkpgG~lii~~~~  147 (251)
T d1wzna1         103 ---KNEFDAVTMFFSTIMYFD-------------------EEDLRKLFSKVAEALKPGGVFITDFPC  147 (251)
T ss_dssp             ---CSCEEEEEECSSGGGGSC-------------------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             ---ccccchHhhhhhhhhcCC-------------------hHHHHHHHHHHHHHcCCCcEEEEEecc
Confidence               36899999842 211111                   122568899999999999999986543


No 19 
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74  E-value=2.2e-17  Score=140.08  Aligned_cols=165  Identities=16%  Similarity=0.198  Sum_probs=119.3

Q ss_pred             ccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhccc-CCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211           17 VYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQE-VPGVQYIATDINPYAVEVTRKTLEAHNV   95 (256)
Q Consensus        17 ~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~-~~~~~v~giD~~~~~i~~a~~~~~~~~~   95 (256)
                      +|+|++.+.++++.+...+.   .+++.+|||+|||+|.+++++...+... .....++|+|+++.+++.|+.++..++.
T Consensus        95 ~~TP~~i~~~m~~l~~~~~~---~~~~~~vlDp~~GsG~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~~~~~~~~~  171 (328)
T d2f8la1          95 QMTPDSIGFIVAYLLEKVIQ---KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ  171 (328)
T ss_dssp             CCCCHHHHHHHHHHHHHHHT---TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred             EECcHHHHHHHHHHHHHHhC---CCCCCEEEeCCCCcchhHHHHHHHHHhccCccceEEEecccHHHHHHHHHHHHHhhh
Confidence            68898888887776655543   2567899999999999999888776433 3456899999999999999999998888


Q ss_pred             cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211           96 HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus        96 ~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                      .....++|.....   ...+||+|++||||......+...........+   .......+++.+.++|+|||+++++.+.
T Consensus       172 ~~~~~~~d~~~~~---~~~~fD~vi~NPPy~~~~~~~~~~~~~~~~~~~---~~~~~~~Fi~~~~~~Lk~~G~~~~I~p~  245 (328)
T d2f8la1         172 KMTLLHQDGLANL---LVDPVDVVISDLPVGYYPDDENAKTFELCREEG---HSFAHFLFIEQGMRYTKPGGYLFFLVPD  245 (328)
T ss_dssp             CCEEEESCTTSCC---CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSS---CEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred             hhhhhcccccccc---ccccccccccCCCCCCCccchhhhhcchhcccC---cchHHHHHHHHHHHhcCCCCceEEEecC
Confidence            7788888866543   246899999999997554432211111111111   1123456899999999999999998874


Q ss_pred             C----CCHHHHHHHHHHcC
Q 025211          176 A----NDPSQICLQMMEKG  190 (256)
Q Consensus       176 ~----~~~~~~~~~~~~~g  190 (256)
                      .    .....+++.+.+.+
T Consensus       246 ~~l~~~~~~~lR~~L~~~~  264 (328)
T d2f8la1         246 AMFGTSDFAKVDKFIKKNG  264 (328)
T ss_dssp             GGGGSTTHHHHHHHHHHHE
T ss_pred             ccccCchhHHHHHHHHhCC
Confidence            3    34456777777765


No 20 
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Probab=99.73  E-value=3.4e-17  Score=129.37  Aligned_cols=163  Identities=15%  Similarity=0.094  Sum_probs=116.1

Q ss_pred             eccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH
Q 025211           12 SSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE   91 (256)
Q Consensus        12 ~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~   91 (256)
                      ..+|.++.|.+... ...| .+.+    ......|||||||+|.+++.+|+.    +|+..++|+|+++.++..|.+++.
T Consensus         7 ~~~p~~~~~~p~~~-~~~w-~~~f----~~~~plvLdIGcG~G~~~~~lA~~----~p~~~~iGid~~~~~v~~a~~~~~   76 (204)
T d1yzha1           7 EANPQYVVLNPLEA-KAKW-RDLF----GNDNPIHVEVGSGKGAFVSGMAKQ----NPDINYIGIDIQKSVLSYALDKVL   76 (204)
T ss_dssp             HTCTTTEECCGGGT-TTTH-HHHH----TSCCCEEEEESCTTSHHHHHHHHH----CTTSEEEEEESCHHHHHHHHHHHH
T ss_pred             HhCcceEecChHHh-hccH-HHHc----CCCCCeEEEEeccCCHHHHHHHHH----CCCCceEEEeccHHHHHHHHHhhh
Confidence            35677777776521 1112 1222    235678999999999999999988    899999999999999999999999


Q ss_pred             HcCCcc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211           92 AHNVHA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY  170 (256)
Q Consensus        92 ~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  170 (256)
                      ..++++ .++.+|+......+.+.++|.|+++.|--...     .+....++        +...+++.+.++|||||.++
T Consensus        77 ~~~l~Ni~~~~~da~~l~~~~~~~~~~~i~i~fPdPw~K-----~~h~krRl--------~~~~~l~~~~~~LkpgG~l~  143 (204)
T d1yzha1          77 EVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPK-----KRHEKRRL--------TYKTFLDTFKRILPENGEIH  143 (204)
T ss_dssp             HHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCS-----GGGGGGST--------TSHHHHHHHHHHSCTTCEEE
T ss_pred             hhccccceeeecCHHHHhhhccCCceehhcccccccccc-----hhhhhhhh--------hHHHHHHHHHHhCCCCcEEE
Confidence            999886 99999988766555678999999876531111     11111122        23688999999999999999


Q ss_pred             EEEeCCCCHHHHHHHHHHcCCcEEEEE
Q 025211          171 LVTLTANDPSQICLQMMEKGYAARIVV  197 (256)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~g~~~~~~~  197 (256)
                      +.+......++....+...++.....+
T Consensus       144 i~TD~~~Y~~~~le~~~~~~~~~~~~~  170 (204)
T d1yzha1         144 FKTDNRGLFEYSLVSFSQYGMKLNGVW  170 (204)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             EEECCccHHHHHHHHHHHCCccccccc
Confidence            976544444555666666676554444


No 21 
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.72  E-value=3.1e-17  Score=123.90  Aligned_cols=105  Identities=16%  Similarity=0.229  Sum_probs=84.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      .+++|||+|||||.++++++..    +. .+|+++|.++.+++.+++|+..+++..  +++++|+...+. ...++||+|
T Consensus        14 ~g~~vlDl~~GtG~~~iea~~r----ga-~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~l~-~~~~~fDiI   87 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEAVSR----GM-SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID-CLTGRFDLV   87 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHHHHT----TC-CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH-HBCSCEEEE
T ss_pred             CCCeEEEcCCccCHHHHHHHHh----Cc-ceeeeehhchhhhhhhhhhhhhcccccchhhhccccccccc-cccccccee
Confidence            6899999999999999987765    33 389999999999999999999998765  899999988753 346789999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHH--hhccccCeEEEEEEe
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSA--DKLLSKRGWLYLVTL  174 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~  174 (256)
                      ++||||.                      .......+..+  .++|+|+|.+++.+.
T Consensus        88 f~DPPy~----------------------~~~~~~~l~~i~~~~~L~~~g~iiiE~~  122 (152)
T d2esra1          88 FLDPPYA----------------------KETIVATIEALAAKNLLSEQVMVVCETD  122 (152)
T ss_dssp             EECCSSH----------------------HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             Eechhhc----------------------cchHHHHHHHHHHCCCcCCCeEEEEEeC
Confidence            9999984                      12234555544  357999999998543


No 22 
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=99.72  E-value=2.4e-17  Score=129.83  Aligned_cols=105  Identities=18%  Similarity=0.228  Sum_probs=89.0

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      .+++|||+|||+|..++.+++.      +++|+|+|+|+.+++.++++....+++. .+...|+.+...   +++||+|+
T Consensus        30 ~~grvLDiGcG~G~~~~~la~~------g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~~fD~I~  100 (198)
T d2i6ga1          30 APGRTLDLGCGNGRNSLYLAAN------GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF---DGEYDFIL  100 (198)
T ss_dssp             CSCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC---CCCEEEEE
T ss_pred             CCCcEEEECCCCCHHHHHHHHH------hhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc---cccccEEE
Confidence            4569999999999998888775      4689999999999999999999888876 888889877643   47899999


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      ++..+++.+..+                   ...++..+.++|+|||+++++..
T Consensus       101 ~~~~~~~~~~~~-------------------~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         101 STVVMMFLEAQT-------------------IPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EESCGGGSCTTH-------------------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EeeeeecCCHHH-------------------HHHHHHHHHHHcCCCcEEEEEEe
Confidence            988877655433                   67899999999999999998764


No 23 
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=99.72  E-value=8e-17  Score=132.22  Aligned_cols=126  Identities=17%  Similarity=0.127  Sum_probs=104.5

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      +++.+|||+|||+|.++..++..+   .|+++|+++|+++++++.|++|+...++..  .+...|+...   +....||.
T Consensus       102 ~pG~~VLDiG~GsG~lt~~lA~~~---~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~---~~~~~~D~  175 (266)
T d1o54a_         102 KEGDRIIDTGVGSGAMCAVLARAV---GSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDA  175 (266)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHT---TTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEE
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHh---CCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccccc---ccccceee
Confidence            689999999999999999998875   367899999999999999999999998754  6777776543   33468999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ  198 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  198 (256)
                      |+.+.|=                          ...+++.+.++|||||++++..+...+...+...+++.||....+..
T Consensus       176 V~~d~p~--------------------------p~~~l~~~~~~LKpGG~lv~~~P~~~Qv~~~~~~l~~~gF~~i~~~E  229 (266)
T d1o54a_         176 LFLDVPD--------------------------PWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWE  229 (266)
T ss_dssp             EEECCSC--------------------------GGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEEC
T ss_pred             eEecCCC--------------------------HHHHHHHHHhhcCCCCEEEEEeCcccHHHHHHHHHHHCCceeEEEEE
Confidence            9997651                          24678999999999999999888777777888889999987666553


No 24 
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.72  E-value=2.8e-16  Score=126.32  Aligned_cols=170  Identities=13%  Similarity=0.075  Sum_probs=116.1

Q ss_pred             cCCccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHH
Q 025211           14 HPEVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEA   92 (256)
Q Consensus        14 ~~~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~   92 (256)
                      ....|+-+.. ...|+..+..-+..++-+++.+|||+|||+|..+..++..    .|+..|+|+|+|+.|++.++++...
T Consensus        45 ~~~e~r~w~p~rsklaA~i~~gl~~l~ikpG~~VLDlGcGsG~~~~~la~~----~~~g~V~aVDiS~~~i~~a~~~a~~  120 (230)
T d1g8sa_          45 GDEEYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADI----ADKGIVYAIEYAPRIMRELLDACAE  120 (230)
T ss_dssp             TTEEEEECCTTTCHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHH----TTTSEEEEEESCHHHHHHHHHHTTT
T ss_pred             CCceeeeECCCccHHHHHHHhhHHhCCCCCCCEEEEeCEEcCHHHHHHHHh----CCCCEEEEEeCcHHHHHHHHHHHhh
Confidence            3344555555 6688888888777777789999999999999999888887    6778999999999999999887654


Q ss_pred             cCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211           93 HNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus        93 ~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      .+ ....+.+|...... ..+..+|++++..-+...                     .....++.++.+.|||||+++++
T Consensus       121 ~~-ni~~i~~d~~~~~~-~~~~~~~v~~i~~~~~~~---------------------~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         121 RE-NIIPILGDANKPQE-YANIVEKVDVIYEDVAQP---------------------NQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CT-TEEEEECCTTCGGG-GTTTCCCEEEEEECCCST---------------------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hc-ccceEEEeeccCcc-cccccceeEEeeccccch---------------------HHHHHHHHHHHHhcccCceEEEE
Confidence            33 22667777766543 234455554442111111                     12567899999999999999986


Q ss_pred             EeCCC-----C----HHHHHHHHHHcCCcEEEEEec-CCCCccEEEEE
Q 025211          173 TLTAN-----D----PSQICLQMMEKGYAARIVVQR-STEEENLHIIK  210 (256)
Q Consensus       173 ~~~~~-----~----~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~~  210 (256)
                      .....     .    .++..+.+++.||+......- .....+..++-
T Consensus       178 ~k~~~~d~~~~~~~~~~e~~~~L~~aGF~ive~idL~py~~~H~~vvg  225 (230)
T d1g8sa_         178 IKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVG  225 (230)
T ss_dssp             EEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEEEECTTTSTTEEEEEE
T ss_pred             eeccccCCCCCHHHHHHHHHHHHHHcCCEEEEEecCCCCcCCeEEEEE
Confidence            53221     1    235667788889987665432 22334544443


No 25 
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}
Probab=99.72  E-value=4.4e-17  Score=133.30  Aligned_cols=136  Identities=12%  Similarity=0.149  Sum_probs=103.1

Q ss_pred             cccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCcc
Q 025211           38 LVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVD  117 (256)
Q Consensus        38 ~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD  117 (256)
                      ++..++.+|||+|||+|.++..++..    +.+ .|+++|+++.+++.|+++..... ..+++++|+.+..  +.+++||
T Consensus        89 l~~~~~~~vLD~GcG~G~~t~~ll~~----~~~-~v~~vD~s~~~l~~a~~~~~~~~-~~~~~~~d~~~~~--~~~~~fD  160 (254)
T d1xtpa_          89 LPGHGTSRALDCGAGIGRITKNLLTK----LYA-TTDLLEPVKHMLEEAKRELAGMP-VGKFILASMETAT--LPPNTYD  160 (254)
T ss_dssp             STTCCCSEEEEETCTTTHHHHHTHHH----HCS-EEEEEESCHHHHHHHHHHTTTSS-EEEEEESCGGGCC--CCSSCEE
T ss_pred             CCCCCCCeEEEecccCChhhHHHHhh----cCc-eEEEEcCCHHHHHhhhccccccc-cceeEEccccccc--cCCCccc
Confidence            34467889999999999998777654    222 79999999999999998764221 1388899988763  3357899


Q ss_pred             EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC---------------CHHHH
Q 025211          118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN---------------DPSQI  182 (256)
Q Consensus       118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------~~~~~  182 (256)
                      +|++...+++.++++                   ...+++++.+.|+|||++++......               ....+
T Consensus       161 ~I~~~~vl~hl~d~d-------------------~~~~l~~~~~~LkpgG~iii~e~~~~~~~~~~d~~d~~~~rs~~~~  221 (254)
T d1xtpa_         161 LIVIQWTAIYLTDAD-------------------FVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHY  221 (254)
T ss_dssp             EEEEESCGGGSCHHH-------------------HHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHH
T ss_pred             eEEeeccccccchhh-------------------hHHHHHHHHHhcCCCcEEEEEecCCCCCcceecccCCceeCCHHHH
Confidence            999987776554422                   56889999999999999998664221               34578


Q ss_pred             HHHHHHcCCcEEEEEecC
Q 025211          183 CLQMMEKGYAARIVVQRS  200 (256)
Q Consensus       183 ~~~~~~~g~~~~~~~~~~  200 (256)
                      .+++++.||+++......
T Consensus       222 ~~l~~~aGf~ii~~~~q~  239 (254)
T d1xtpa_         222 KRLFNESGVRVVKEAFQE  239 (254)
T ss_dssp             HHHHHHHTCCEEEEEECT
T ss_pred             HHHHHHcCCEEEEEEeeC
Confidence            899999999887665443


No 26 
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=99.72  E-value=2.2e-17  Score=134.32  Aligned_cols=119  Identities=12%  Similarity=0.114  Sum_probs=89.4

Q ss_pred             HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211           27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS  106 (256)
Q Consensus        27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~  106 (256)
                      .++.+.+.+... ..++++|||+|||+|.++..+++.      +.+|+|+|+|+.|++.|+++....+.+.+++++|+.+
T Consensus        23 ~~~~~~~~~~~~-~~~~~~vLDiGCG~G~~~~~l~~~------g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~   95 (246)
T d1y8ca_          23 WSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPK------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN   95 (246)
T ss_dssp             HHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGG------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG
T ss_pred             HHHHHHHHHHHh-CCCCCeEEEEeCcCCHHHHHHHHh------CCccEeeccchhhhhhccccccccCccceeeccchhh
Confidence            344444444321 235689999999999988877765      3489999999999999999998888888999999987


Q ss_pred             chhhhcCCCccEEEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          107 GLEKRLAGLVDVMVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       107 ~~~~~~~~~fD~Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ...   +++||+|+|.. .+.+..                  .......+++.+.+.|||||.+++..
T Consensus        96 ~~~---~~~fD~i~~~~~~~~~~~------------------~~~~~~~~l~~~~~~LkpgG~~i~~~  142 (246)
T d1y8ca_          96 LNI---NRKFDLITCCLDSTNYII------------------DSDDLKKYFKAVSNHLKEGGVFIFDI  142 (246)
T ss_dssp             CCC---SCCEEEEEECTTGGGGCC------------------SHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             hcc---cccccccceeeeeeeccC------------------CHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence            632   46899999832 221111                  12336789999999999999999744


No 27 
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.71  E-value=1e-16  Score=135.45  Aligned_cols=152  Identities=16%  Similarity=0.126  Sum_probs=109.6

Q ss_pred             chHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEE
Q 025211           23 DSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLI  100 (256)
Q Consensus        23 ~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~  100 (256)
                      +......++...+     .++++|||+|||+|.+++.++..    +. .+|+++|+++.+++.+++|+..||+..  +++
T Consensus       131 Dqr~~r~~~~~~~-----~~g~~VLDl~~g~G~~si~~a~~----ga-~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~  200 (324)
T d2as0a2         131 DQRENRLALEKWV-----QPGDRVLDVFTYTGGFAIHAAIA----GA-DEVIGIDKSPRAIETAKENAKLNGVEDRMKFI  200 (324)
T ss_dssp             TTHHHHHHHGGGC-----CTTCEEEETTCTTTHHHHHHHHT----TC-SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred             chhhHHHHHHhhc-----CCCCeeecccCcccchhhhhhhc----CC-cEEEeecCCHHHHHHHHHHHHHcCCCccceee
Confidence            3444444554443     47899999999999999988765    22 389999999999999999999999854  899


Q ss_pred             Ecchhhchhhh--cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC
Q 025211          101 NTDIASGLEKR--LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND  178 (256)
Q Consensus       101 ~~d~~~~~~~~--~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~  178 (256)
                      ++|+.+.+...  ...+||+|++|||++.......     .       .+...+.+++..+.++|+|||++++++++...
T Consensus       201 ~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~~~~~~~-----~-------~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~~~  268 (324)
T d2as0a2         201 VGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDL-----K-------AGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV  268 (324)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGH-----H-------HHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS
T ss_pred             echhhhhhHHHHhccCCCCchhcCCccccCCHHHH-----H-------HHHHHHHHHHHHHHHHcCCCcEEEEEeCCccC
Confidence            99998875432  3578999999999876543211     0       11234678899999999999999998775542


Q ss_pred             -HHHH----HHHHHHcCCcEEEE
Q 025211          179 -PSQI----CLQMMEKGYAARIV  196 (256)
Q Consensus       179 -~~~~----~~~~~~~g~~~~~~  196 (256)
                       .+++    .+...+.|-....+
T Consensus       269 ~~~~f~~~v~~a~~~~gr~~~~~  291 (324)
T d2as0a2         269 DLQMFKDMIIAAGAKAGKFLKML  291 (324)
T ss_dssp             CHHHHHHHHHHHHHHTTEEEEES
T ss_pred             CHHHHHHHHHHHHHHcCCeEEEe
Confidence             2333    33444455444443


No 28 
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.71  E-value=4.9e-17  Score=132.93  Aligned_cols=127  Identities=21%  Similarity=0.232  Sum_probs=102.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC---Ccc-eEEEcchhhchhhhcCCCc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN---VHA-DLINTDIASGLEKRLAGLV  116 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~---~~~-~~~~~d~~~~~~~~~~~~f  116 (256)
                      .|+.+|||+|||+|.+++.++..+   +|+++|+++|+++++++.|++|+....   ..+ .+.++|+.+.  ++.+++|
T Consensus        95 ~PG~~VLE~G~GsG~lt~~La~~v---gp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~--~~~~~~f  169 (264)
T d1i9ga_          95 FPGARVLEAGAGSGALTLSLLRAV---GPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELPDGSV  169 (264)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHH---CTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCCTTCE
T ss_pred             CCCCEEEecCcCCcHHHHHHHHhh---CCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccc--cccCCCc
Confidence            689999999999999999999987   467899999999999999999998642   233 8889998775  3346899


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHH-HcCCcEEE
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMM-EKGYAARI  195 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-~~g~~~~~  195 (256)
                      |.|+++.|-                          ...++..+.++|||||++++..|...+...+...++ +.+|....
T Consensus       170 DaV~ldlp~--------------------------P~~~l~~~~~~LkpGG~lv~~~P~i~Qv~~~~~~l~~~~~f~~i~  223 (264)
T d1i9ga_         170 DRAVLDMLA--------------------------PWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPR  223 (264)
T ss_dssp             EEEEEESSC--------------------------GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCE
T ss_pred             ceEEEecCC--------------------------HHHHHHHHHhccCCCCEEEEEeCccChHHHHHHHHHHcCCeecce
Confidence            999997652                          236688999999999999998887777777777775 45676544


Q ss_pred             EEe
Q 025211          196 VVQ  198 (256)
Q Consensus       196 ~~~  198 (256)
                      +..
T Consensus       224 ~~E  226 (264)
T d1i9ga_         224 AWE  226 (264)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            443


No 29 
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}
Probab=99.70  E-value=2e-16  Score=123.07  Aligned_cols=130  Identities=14%  Similarity=0.180  Sum_probs=95.2

Q ss_pred             eeccCC-ccccCCc--hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHH
Q 025211           11 VSSHPE-VYEPCDD--SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTR   87 (256)
Q Consensus        11 ~~~~~~-~~~p~~~--~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~   87 (256)
                      +...++ ..+|+++  .+.+.+++...+      .+.+|||++||+|.++++++..    +. ..|+.||.++.+++.++
T Consensus        15 l~~~~~~~~RPt~~~vre~lfn~l~~~~------~~~~vLDlfaGsG~~giealsr----Ga-~~v~~VE~~~~a~~~~k   83 (183)
T d2fpoa1          15 LPVPDSPGLRPTTDRVRETLFNWLAPVI------VDAQCLDCFAGSGALGLEALSR----YA-AGATLIEMDRAVSQQLI   83 (183)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHH------TTCEEEETTCTTCHHHHHHHHT----TC-SEEEEECSCHHHHHHHH
T ss_pred             ecCCCCCCcCcCcHHHHHHHHhhhhccc------chhhhhhhhccccceeeeEEec----Cc-ceeEEEEEeechhhHHH
Confidence            334444 4677766  566666665554      5789999999999999988876    33 38999999999999999


Q ss_pred             HHHHHcCCcc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh--hccc
Q 025211           88 KTLEAHNVHA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD--KLLS  164 (256)
Q Consensus        88 ~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~Lk  164 (256)
                      +|+..++... .++.+|+.+.+.. ...+||+|++||||....                      ...++..+.  .+|+
T Consensus        84 ~N~~~~~~~~~~ii~~d~~~~l~~-~~~~fDlIf~DPPY~~~~----------------------~~~~l~~l~~~~~L~  140 (183)
T d2fpoa1          84 KNLATLKAGNARVVNSNAMSFLAQ-KGTPHNIVFVDPPFRRGL----------------------LEETINLLEDNGWLA  140 (183)
T ss_dssp             HHHHHTTCCSEEEECSCHHHHHSS-CCCCEEEEEECCSSSTTT----------------------HHHHHHHHHHTTCEE
T ss_pred             HHHhhccccceeeeeecccccccc-cccccCEEEEcCccccch----------------------HHHHHHHHHHCCCCC
Confidence            9999887765 8999999887654 357899999999996311                      344555543  4699


Q ss_pred             cCeEEEEEEe
Q 025211          165 KRGWLYLVTL  174 (256)
Q Consensus       165 pgG~l~~~~~  174 (256)
                      ++|++++-+.
T Consensus       141 ~~~iIiiE~~  150 (183)
T d2fpoa1         141 DEALIYVESE  150 (183)
T ss_dssp             EEEEEEEEEE
T ss_pred             CCeEEEEEec
Confidence            9999998543


No 30 
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=99.70  E-value=1.7e-16  Score=123.25  Aligned_cols=126  Identities=17%  Similarity=0.179  Sum_probs=94.6

Q ss_pred             CccccCCc--hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211           16 EVYEPCDD--SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH   93 (256)
Q Consensus        16 ~~~~p~~~--~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~   93 (256)
                      ...+|+++  .+.+.+++...      .++.+|||++||+|.++++++..    +. ..|+++|.++.+++.+++|+..+
T Consensus        19 ~~~RPt~~~vrealFn~l~~~------~~~~~vLDlfaGsG~~g~ea~sr----Ga-~~v~~ve~~~~a~~~~~~N~~~~   87 (182)
T d2fhpa1          19 DNTRPTTDKVKESIFNMIGPY------FDGGMALDLYSGSGGLAIEAVSR----GM-DKSICIEKNFAALKVIKENIAIT   87 (182)
T ss_dssp             CSSCCCCHHHHHHHHHHHCSC------CSSCEEEETTCTTCHHHHHHHHT----TC-SEEEEEESCHHHHHHHHHHHHHH
T ss_pred             CCcCcCcHHHHHHHHHHHHHh------cCCCEEEEcccccccccceeeec----ch-hHHHHHHHHHHHHHHHHHHhhhh
Confidence            35677765  44444544332      36899999999999999988886    32 37999999999999999999988


Q ss_pred             CCcc--eEEEcchhhchhhh--cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh--hccccCe
Q 025211           94 NVHA--DLINTDIASGLEKR--LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD--KLLSKRG  167 (256)
Q Consensus        94 ~~~~--~~~~~d~~~~~~~~--~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG  167 (256)
                      +...  +++++|+.+.+...  ...+||+|++||||....                      ....+..+.  .+|+++|
T Consensus        88 ~~~~~~~i~~~D~~~~l~~~~~~~~~fDlIflDPPY~~~~----------------------~~~~l~~i~~~~~L~~~g  145 (182)
T d2fhpa1          88 KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQE----------------------IVSQLEKMLERQLLTNEA  145 (182)
T ss_dssp             TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCC----------------------HHHHHHHHHHTTCEEEEE
T ss_pred             hcccccccccccchhhhhhhcccCCCcceEEechhhhhhH----------------------HHHHHHHHHHCCCCCCCE
Confidence            8754  89999998876542  345799999999994211                      345555553  5799999


Q ss_pred             EEEEEEe
Q 025211          168 WLYLVTL  174 (256)
Q Consensus       168 ~l~~~~~  174 (256)
                      ++++-+.
T Consensus       146 iIi~E~~  152 (182)
T d2fhpa1         146 VIVCETD  152 (182)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEcC
Confidence            9887443


No 31 
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.69  E-value=4.8e-16  Score=127.16  Aligned_cols=146  Identities=12%  Similarity=0.140  Sum_probs=107.2

Q ss_pred             eeccCCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH
Q 025211           11 VSSHPEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL   90 (256)
Q Consensus        11 ~~~~~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~   90 (256)
                      +++....+.++..++.  ..+...+     +++.+|||+|||+|.+++.+++.     +.++|+++|+|+.+++.+++|+
T Consensus        83 ~d~~~~~f~~~~~~er--~ri~~~~-----~~g~~VlD~~aG~G~~~l~~a~~-----~~~~V~avd~n~~a~~~~~~N~  150 (260)
T d2frna1          83 LDVAKIMFSPANVKER--VRMAKVA-----KPDELVVDMFAGIGHLSLPIAVY-----GKAKVIAIEKDPYTFKFLVENI  150 (260)
T ss_dssp             EETTTSCCCGGGHHHH--HHHHHHC-----CTTCEEEETTCTTTTTHHHHHHH-----TCCEEEEECCCHHHHHHHHHHH
T ss_pred             eccccccEecCCHHHH--HHHHhhc-----CCccEEEECcceEcHHHHHHHHh-----CCcEEEEecCCHHHHHHHHHHH
Confidence            3344556666544332  2344443     57999999999999999988876     2458999999999999999999


Q ss_pred             HHcCCcc--eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeE
Q 025211           91 EAHNVHA--DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGW  168 (256)
Q Consensus        91 ~~~~~~~--~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~  168 (256)
                      ..|++..  +++++|+.+...   .+.||.|++|||..                         ...++..+.++|++||+
T Consensus       151 ~~n~l~~~v~~~~~D~~~~~~---~~~~D~Ii~~~p~~-------------------------~~~~l~~a~~~l~~gG~  202 (260)
T d2frna1         151 HLNKVEDRMSAYNMDNRDFPG---ENIADRILMGYVVR-------------------------THEFIPKALSIAKDGAI  202 (260)
T ss_dssp             HHTTCTTTEEEECSCTTTCCC---CSCEEEEEECCCSS-------------------------GGGGHHHHHHHEEEEEE
T ss_pred             HHhCCCceEEEEEcchHHhcc---CCCCCEEEECCCCc-------------------------hHHHHHHHHhhcCCCCE
Confidence            9999876  889999988753   36899999998853                         23456777889999999


Q ss_pred             EEEEEe--C----CCCHHHHHHHHHHcCCcEEEE
Q 025211          169 LYLVTL--T----ANDPSQICLQMMEKGYAARIV  196 (256)
Q Consensus       169 l~~~~~--~----~~~~~~~~~~~~~~g~~~~~~  196 (256)
                      +.+...  .    ....+.+.+.....|+.....
T Consensus       203 lh~~~~~~~~~~~~~~~e~~~~~~~~~g~~v~~~  236 (260)
T d2frna1         203 IHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL  236 (260)
T ss_dssp             EEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred             EEEEeccccccchhhHHHHHHHHHHHcCCceEEE
Confidence            865322  1    112345666777788876543


No 32 
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein  FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69  E-value=1.3e-16  Score=134.34  Aligned_cols=132  Identities=14%  Similarity=0.111  Sum_probs=99.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-----------cc-eEEEcchhhch
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-----------HA-DLINTDIASGL  108 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-----------~~-~~~~~d~~~~~  108 (256)
                      .++.+|||+|||+|.+++.++..+   ++++.|+++|+++++++.|++|+...+.           .+ .+.++|+.+..
T Consensus        97 ~pG~rVLE~GtGsG~lt~~LAr~v---g~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~  173 (324)
T d2b25a1          97 NPGDTVLEAGSGSGGMSLFLSKAV---GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT  173 (324)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHH---CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred             CCCCEEEEecccccHHHHHHHHHh---CCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhcc
Confidence            689999999999999999999987   4677999999999999999999986421           12 78899987765


Q ss_pred             hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHH
Q 025211          109 EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMME  188 (256)
Q Consensus       109 ~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~  188 (256)
                      .......||.|+++.|-                          ...++..+.++|||||++++..|+..+...+...++.
T Consensus       174 ~~~~~~~fD~V~LD~p~--------------------------P~~~l~~~~~~LKpGG~lv~~~P~i~Qv~~~~~~l~~  227 (324)
T d2b25a1         174 EDIKSLTFDAVALDMLN--------------------------PHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT  227 (324)
T ss_dssp             -------EEEEEECSSS--------------------------TTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred             cccCCCCcceEeecCcC--------------------------HHHHHHHHHHhccCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            54456789999998662                          1245889999999999999988877766777777765


Q ss_pred             c--CCcEEEEEecCC
Q 025211          189 K--GYAARIVVQRST  201 (256)
Q Consensus       189 ~--g~~~~~~~~~~~  201 (256)
                      .  +|..+.+.....
T Consensus       228 ~~~~f~~i~~~E~~~  242 (324)
T d2b25a1         228 CELALSCEKISEVIV  242 (324)
T ss_dssp             HTCCEEEEEEECCCC
T ss_pred             cCCCceeeEEEEEEe
Confidence            4  566655554433


No 33 
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}
Probab=99.68  E-value=1.1e-16  Score=132.76  Aligned_cols=118  Identities=17%  Similarity=0.269  Sum_probs=93.1

Q ss_pred             HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211           27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA  105 (256)
Q Consensus        27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~  105 (256)
                      +.+.+++.+..+  .++.+|||+|||+|.++..++..    .+ ++.|+|+|+|+.+++.|+++....+.+.+++++|+.
T Consensus        14 ~l~~l~~~~~~~--~~~~~ILDiGcG~G~~~~~la~~----~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~   87 (281)
T d2gh1a1          14 YVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPL----LPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT   87 (281)
T ss_dssp             HHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTT----SCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTT
T ss_pred             HHHHHHHHHhcc--CCcCEEEEecCcCCHHHHHHHHh----CCCCCEEEEEecchhHhhhhhcccccccccccccccccc
Confidence            345555544322  46789999999999987776665    33 578999999999999999999888877799999987


Q ss_pred             hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      +..  + +++||+|+++..+.+.++                     ...+++++.+.|||||.+++..+
T Consensus        88 ~~~--~-~~~fD~v~~~~~l~~~~d---------------------~~~~l~~~~~~LkpgG~lii~~~  132 (281)
T d2gh1a1          88 EIE--L-NDKYDIAICHAFLLHMTT---------------------PETMLQKMIHSVKKGGKIICFEP  132 (281)
T ss_dssp             TCC--C-SSCEEEEEEESCGGGCSS---------------------HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             ccc--c-cCCceEEEEehhhhcCCC---------------------HHHHHHHHHHHcCcCcEEEEEEC
Confidence            752  2 468999999876655443                     46789999999999999998774


No 34 
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}
Probab=99.68  E-value=8.1e-16  Score=129.25  Aligned_cols=129  Identities=16%  Similarity=0.155  Sum_probs=96.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc---eEEEcchhhchhhh--cCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA---DLINTDIASGLEKR--LAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~---~~~~~d~~~~~~~~--~~~~  115 (256)
                      .++++|||++||+|.+++.++..     ....|+++|+++.+++.+++|+..|++..   +++++|+.+.+...  ...+
T Consensus       143 ~~g~~VLdlf~~~G~~sl~aa~~-----ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~  217 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVAAAMG-----GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLT  217 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHHHHHT-----TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred             hCCCceeecCCCCcHHHHHHHhC-----CCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCC
Confidence            36899999999999999887664     12379999999999999999999999853   89999999887533  3468


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-CHHHHHHHH
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-DPSQICLQM  186 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~  186 (256)
                      ||+||+|||.+......            .......+.+++..+.++|+|||++++++++.. ..+++...+
T Consensus       218 fD~Ii~DPP~f~~~~~~------------~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs~~~~~~~f~~~v  277 (317)
T d2b78a2         218 YDIIIIDPPSFARNKKE------------VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQI  277 (317)
T ss_dssp             EEEEEECCCCC-----C------------CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred             CCEEEEcChhhccchhH------------HHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCccCCHHHHHHHH
Confidence            99999999976533321            111233477899999999999999999887543 233443333


No 35 
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=99.67  E-value=6.1e-16  Score=126.32  Aligned_cols=131  Identities=17%  Similarity=0.208  Sum_probs=102.4

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      .+.++|||+|||+|.+++.+++.    +|+..++++|+ +.+++.+++++...++..  +++.+|+.+..    ..+||+
T Consensus        79 ~~~~~VLDvGcG~G~~~~~la~~----~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~----~~~~D~  149 (253)
T d1tw3a2          79 TNVRHVLDVGGGKGGFAAAIARR----APHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL----PRKADA  149 (253)
T ss_dssp             TTCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC----SSCEEE
T ss_pred             ccCCEEEEeCCCCCHHHHHHHHh----cceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhc----ccchhh
Confidence            35689999999999998888877    89999999998 678999999999887654  89999987643    257999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC----------------------
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA----------------------  176 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------  176 (256)
                      |++.-.+++.++.                   ....+|+++.+.|||||++++.....                      
T Consensus       150 v~~~~vlh~~~d~-------------------~~~~~L~~~~~~LkPGG~l~i~e~~~~~~~~~~~~~~~~dl~~~~~~~  210 (253)
T d1tw3a2         150 IILSFVLLNWPDH-------------------DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLG  210 (253)
T ss_dssp             EEEESCGGGSCHH-------------------HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS
T ss_pred             eeeccccccCCch-------------------hhHHHHHHHHHhcCCCcEEEEEeccCCCCCcchhHHHHhhHHHHhhCC
Confidence            9997655443332                   24688999999999999999865321                      


Q ss_pred             ---CCHHHHHHHHHHcCCcEEEEEec
Q 025211          177 ---NDPSQICLQMMEKGYAARIVVQR  199 (256)
Q Consensus       177 ---~~~~~~~~~~~~~g~~~~~~~~~  199 (256)
                         ...++..+++++.||....+...
T Consensus       211 g~~rt~~e~~~ll~~AGf~~~~v~~~  236 (253)
T d1tw3a2         211 GALRTREKWDGLAASAGLVVEEVRQL  236 (253)
T ss_dssp             CCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEEEC
Confidence               12456778899999987766544


No 36 
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.67  E-value=2e-15  Score=120.95  Aligned_cols=155  Identities=15%  Similarity=0.169  Sum_probs=111.2

Q ss_pred             CccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 025211           16 EVYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN   94 (256)
Q Consensus        16 ~~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~   94 (256)
                      ..|+-+.. ...++..|+.-+..++.+++.+|||+|||+|..+..++..++   +++.|+|+|+++.+++.++++....+
T Consensus        46 ~e~R~w~p~rSKlaa~i~~~l~~l~i~pG~~VLDlGaGsG~~t~~la~~VG---~~G~V~aVD~s~~~l~~a~~~a~~~~  122 (227)
T d1g8aa_          46 EEYRIWNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVG---WEGKIFGIEFSPRVLRELVPIVEERR  122 (227)
T ss_dssp             EEEEECCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHSSCT
T ss_pred             eeEEEECCCccHHHHHHHccccccccCCCCEEEEeccCCCHHHHHHHHHhC---CCCEEEEEeCcHHHHHHHHHHHHhcC
Confidence            34555544 677888888777777778999999999999999999999874   66799999999999999998875443


Q ss_pred             CcceEEEcchhhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211           95 VHADLINTDIASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus        95 ~~~~~~~~d~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                       ....+..|...... ......+|+|+++.++..                       ....++.++.+.|||||+++++.
T Consensus       123 -~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~~~~-----------------------~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         123 -NIVPILGDATKPEEYRALVPKVDVIFEDVAQPT-----------------------QAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             -TEEEEECCTTCGGGGTTTCCCEEEEEECCCSTT-----------------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -CceEEEEECCCcccccccccceEEEEEEccccc-----------------------hHHHHHHHHHHhcccCCeEEEEE
Confidence             22566677654432 223467999999876531                       24678999999999999999865


Q ss_pred             eCCC-----CHHHH---HHHHHHcCCcEEEEE
Q 025211          174 LTAN-----DPSQI---CLQMMEKGYAARIVV  197 (256)
Q Consensus       174 ~~~~-----~~~~~---~~~~~~~g~~~~~~~  197 (256)
                      ....     ..+.+   ...+.+.+|+.....
T Consensus       179 ka~~~~~~~~~~~v~~~v~~l~~~gf~iie~i  210 (227)
T d1g8aa_         179 KSRSIDVTKEPEQVFREVERELSEYFEVIERL  210 (227)
T ss_dssp             EGGGTCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred             ECCccCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence            3221     22222   223345688876543


No 37 
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.67  E-value=8.2e-16  Score=121.21  Aligned_cols=78  Identities=19%  Similarity=0.335  Sum_probs=67.2

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      ..+++|||+|||+|.++++++..    + ...|+|+|+++.+++.+++|+..++...+++.+|..+.     .++||+|+
T Consensus        45 l~g~~vLDlg~GtG~l~i~a~~~----g-~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----~~~fD~Vi  114 (201)
T d1wy7a1          45 IEGKVVADLGAGTGVLSYGALLL----G-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----NSRVDIVI  114 (201)
T ss_dssp             STTCEEEEETCTTCHHHHHHHHT----T-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----CCCCSEEE
T ss_pred             CCCCEEEECcCcchHHHHHHHHc----C-CCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----CCcCcEEE
Confidence            47899999999999999887654    2 24899999999999999999998888889999998664     46899999


Q ss_pred             ECCCCCCC
Q 025211          121 VNPPYVPT  128 (256)
Q Consensus       121 ~npP~~~~  128 (256)
                      +||||...
T Consensus       115 ~nPP~~~~  122 (201)
T d1wy7a1         115 MNPPFGSQ  122 (201)
T ss_dssp             ECCCCSSS
T ss_pred             EcCccccc
Confidence            99999643


No 38 
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=99.67  E-value=9e-17  Score=125.72  Aligned_cols=110  Identities=13%  Similarity=0.115  Sum_probs=84.1

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC-------------cceEEEcchhh
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV-------------HADLINTDIAS  106 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~-------------~~~~~~~d~~~  106 (256)
                      ..++.+|||+|||+|..+..+++.      ++.|+|+|+|+.|++.|+++....+.             ...++++|+.+
T Consensus        18 ~~~~~rvLd~GCG~G~~a~~la~~------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   91 (201)
T d1pjza_          18 VVPGARVLVPLCGKSQDMSWLSGQ------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   91 (201)
T ss_dssp             CCTTCEEEETTTCCSHHHHHHHHH------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             CCCCCEEEEecCcCCHHHHHHHHc------CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence            468899999999999999988876      67999999999999999998754322             22677788766


Q ss_pred             chhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211          107 GLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus       107 ~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                      .... ....||+|++.-.+.+.+.                   .....+++.+.++|||||.+++....
T Consensus        92 l~~~-~~~~~D~i~~~~~l~~l~~-------------------~~~~~~~~~i~~~LkpgG~l~l~~~~  140 (201)
T d1pjza_          92 LTAR-DIGHCAAFYDRAAMIALPA-------------------DMRERYVQHLEALMPQACSGLLITLE  140 (201)
T ss_dssp             STHH-HHHSEEEEEEESCGGGSCH-------------------HHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred             cccc-cccceeEEEEEeeeEecch-------------------hhhHHHHHHHHHhcCCCcEEEEEEcc
Confidence            5322 2467999998654433222                   22568899999999999998876643


No 39 
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Probab=99.67  E-value=6.2e-16  Score=126.17  Aligned_cols=124  Identities=13%  Similarity=0.117  Sum_probs=92.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      .++++|||+|||+|..+..+++.    . ...|+|+|+|+.|++.|+++....+..  ..++++|+...... ..++||+
T Consensus        23 ~~~~~VLDlGCG~G~~~~~~~~~----~-~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~-~~~~fD~   96 (252)
T d1ri5a_          23 KRGDSVLDLGCGKGGDLLKYERA----G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-LGKEFDV   96 (252)
T ss_dssp             CTTCEEEEETCTTTTTHHHHHHH----T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-CSSCEEE
T ss_pred             CCcCEEEEecccCcHHHHHHHHc----C-CCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhccc-ccccceE
Confidence            57899999999999987777665    2 248999999999999999988776654  38899998654322 3568999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcC
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKG  190 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g  190 (256)
                      |+|....++....                 .+....+++.+.++|||||++++..+.   .+.+...+....
T Consensus        97 V~~~~~l~~~~~~-----------------~~~~~~~l~~i~~~Lk~gG~~i~~~~~---~~~i~~~~~~~~  148 (252)
T d1ri5a_          97 ISSQFSFHYAFST-----------------SESLDIAQRNIARHLRPGGYFIMTVPS---RDVILERYKQGR  148 (252)
T ss_dssp             EEEESCGGGGGSS-----------------HHHHHHHHHHHHHTEEEEEEEEEEEEC---HHHHHHHHHHTC
T ss_pred             EEEcceeeecCCC-----------------HHHHHHHHHHHhceeCCCCEEEEEecC---HHHHHHHHHhcc
Confidence            9997554432221                 234678999999999999999987653   445555555443


No 40 
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.66  E-value=2e-15  Score=124.91  Aligned_cols=114  Identities=14%  Similarity=0.153  Sum_probs=87.1

Q ss_pred             HHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchh
Q 025211           28 VDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIA  105 (256)
Q Consensus        28 ~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~  105 (256)
                      .+.+++.+   ..+++.+|||||||+|.++..+++.     .+++|+|+|+|+++++.|++++...++..  .+...|..
T Consensus        41 ~~~~~~~l---~l~~g~~VLDiGCG~G~~a~~~a~~-----~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~  112 (280)
T d2fk8a1          41 VDLNLDKL---DLKPGMTLLDIGCGWGTTMRRAVER-----FDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE  112 (280)
T ss_dssp             HHHHHTTS---CCCTTCEEEEESCTTSHHHHHHHHH-----HCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG
T ss_pred             HHHHHHHc---CCCCCCEEEEecCCchHHHHHHHHh-----CceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhh
Confidence            34444444   3478999999999999998877765     25699999999999999999999888765  55556654


Q ss_pred             hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      +.     +++||.|++.--+.+.+.                   ..+..+++.+.++|||||++++-+
T Consensus       113 ~~-----~~~fD~i~si~~~eh~~~-------------------~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         113 DF-----AEPVDRIVSIEAFEHFGH-------------------ENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             GC-----CCCCSEEEEESCGGGTCG-------------------GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hh-----ccchhhhhHhhHHHHhhh-------------------hhHHHHHHHHHhccCCCceEEEEE
Confidence            43     578999999543332221                   126789999999999999999844


No 41 
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=99.65  E-value=3.2e-16  Score=129.14  Aligned_cols=108  Identities=13%  Similarity=0.218  Sum_probs=85.5

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEE
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      ..++.+|||+|||+|.++..+++.    ++++.++|+|+|+.+++.|+++.    .+..+.++|+.+.  ++.+++||+|
T Consensus        82 ~~~~~~iLDiGcG~G~~~~~l~~~----~~~~~~~giD~s~~~~~~a~~~~----~~~~~~~~d~~~l--~~~~~sfD~v  151 (268)
T d1p91a_          82 DDKATAVLDIGCGEGYYTHAFADA----LPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRL--PFSDTSMDAI  151 (268)
T ss_dssp             CTTCCEEEEETCTTSTTHHHHHHT----CTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSC--SBCTTCEEEE
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHH----CCCCEEEEecchHhhhhhhhccc----ccccceeeehhhc--cCCCCCEEEE
Confidence            467899999999999988777776    77889999999999999988753    2348899998876  4557899999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHH
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQ  185 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~  185 (256)
                      ++....                            ..++++.++|||||+++++++......++...
T Consensus       152 ~~~~~~----------------------------~~~~e~~rvLkpgG~l~~~~p~~~~l~el~~~  189 (268)
T d1p91a_         152 IRIYAP----------------------------CKAEELARVVKPGGWVITATPGPRHLMELKGL  189 (268)
T ss_dssp             EEESCC----------------------------CCHHHHHHHEEEEEEEEEEEECTTTTHHHHTT
T ss_pred             eecCCH----------------------------HHHHHHHHHhCCCcEEEEEeeCCcchHHHHHH
Confidence            985321                            11567889999999999999877665555443


No 42 
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.65  E-value=1.7e-15  Score=125.97  Aligned_cols=130  Identities=12%  Similarity=0.088  Sum_probs=95.2

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc---eEEEcchhhchhhh--cCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA---DLINTDIASGLEKR--LAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~---~~~~~d~~~~~~~~--~~~~  115 (256)
                      .++.+|||++||||.++++++..      ++.|++||.|+.+++.|++|+..|++..   +++++|+.+.+...  ...+
T Consensus       131 ~~~~rVLdlf~~tG~~sl~aa~~------GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~~~~~~  204 (309)
T d2igta1         131 DRPLKVLNLFGYTGVASLVAAAA------GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGST  204 (309)
T ss_dssp             SSCCEEEEETCTTCHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCC
T ss_pred             cCCCeEEEecCCCcHHHHHHHhC------CCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHhhcCCC
Confidence            46889999999999999988764      5689999999999999999999998753   89999999887542  3578


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-C-CHHHHHHHHH
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-N-DPSQICLQMM  187 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~-~~~~~~~~~~  187 (256)
                      ||+||+|||.+........  +.         -...+..++..+..+|+|||.+++++... . ....+...+.
T Consensus       205 fD~IilDPP~f~~~~~~~~--~~---------~~~~~~~l~~~~~~ll~~~g~~ll~t~~s~~~s~~~~~~~~~  267 (309)
T d2igta1         205 YDIILTDPPKFGRGTHGEV--WQ---------LFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR  267 (309)
T ss_dssp             BSEEEECCCSEEECTTCCE--EE---------HHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred             CCEEEECCCcccccccchh--HH---------HHHHHHHHHHHHHHhcCCCCCEEEEecCCCCCCHHHHHHHHH
Confidence            9999999997643332110  00         01235667788999999999766554422 2 3334444443


No 43 
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65  E-value=2.4e-15  Score=120.96  Aligned_cols=140  Identities=13%  Similarity=0.009  Sum_probs=101.7

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc----------
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH----------   93 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~----------   93 (256)
                      ...|++++...+.   ..++.+|||+|||+|..+..++..      +++|+|+|+|+.+++.|+++....          
T Consensus        30 ~~~l~~~~~~~l~---~~~~~rvLd~GCG~G~~a~~LA~~------G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~  100 (229)
T d2bzga1          30 HQLLKKHLDTFLK---GKSGLRVFFPLCGKAVEMKWFADR------GHSVVGVEISELGIQEFFTEQNLSYSEEPITEIP  100 (229)
T ss_dssp             CHHHHHHHHHHHT---TCCSCEEEETTCTTCTHHHHHHHT------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTST
T ss_pred             CHHHHHHHHHhcC---CCCCCEEEEeCCCCcHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHhhccccccchhccc
Confidence            3566666655543   257889999999999999888875      679999999999999998875432          


Q ss_pred             --------CCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc
Q 025211           94 --------NVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK  165 (256)
Q Consensus        94 --------~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp  165 (256)
                              +...++.++|+.+... ...+.||+|+..--+++.+...                   ...++..+.++|||
T Consensus       101 ~~~~~~~~~~~v~~~~~d~~~l~~-~~~~~fd~i~~~~~l~~~~~~~-------------------r~~~~~~~~~~Lkp  160 (229)
T d2bzga1         101 GTKVFKSSSGNISLYCCSIFDLPR-TNIGKFDMIWDRGALVAINPGD-------------------RKCYADTMFSLLGK  160 (229)
T ss_dssp             TCEEEEETTSSEEEEESCGGGGGG-SCCCCEEEEEESSSTTTSCGGG-------------------HHHHHHHHHHTEEE
T ss_pred             ccceeeecCCcEEEEEcchhhccc-cccCceeEEEEEEEEEeccchh-------------------hHHHHHHHHhhcCC
Confidence                    1123788899877643 3457899999876665544332                   57889999999999


Q ss_pred             CeEEEEEEeCCC-----------CHHHHHHHHHHcCCcE
Q 025211          166 RGWLYLVTLTAN-----------DPSQICLQMMEKGYAA  193 (256)
Q Consensus       166 gG~l~~~~~~~~-----------~~~~~~~~~~~~g~~~  193 (256)
                      ||+++++.....           ..+++..++.. +|.+
T Consensus       161 gG~~~l~~~~~~~~~~~gpp~~~~~~el~~lf~~-~~~i  198 (229)
T d2bzga1         161 KFQYLLCVLSYDPTKHPGPPFYVPHAEIERLFGK-ICNI  198 (229)
T ss_dssp             EEEEEEEEEECCTTTCCCSSCCCCHHHHHHHHTT-TEEE
T ss_pred             cceEEEEEcccCCCCCCCCCCCCCHHHHHHHhcC-CCEE
Confidence            999888765332           34566777643 4544


No 44 
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.65  E-value=1.5e-14  Score=114.50  Aligned_cols=121  Identities=16%  Similarity=0.143  Sum_probs=90.6

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD  103 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d  103 (256)
                      ...++..++.- ..++-+|+.+|||+|||+|..+..++..    .++.+|+|+|+++.|++.|+++....+ ...++.+|
T Consensus        39 rsklaa~i~~g-~~l~lkpg~~VLDlGcG~G~~~~~la~~----v~~g~V~gvDis~~~i~~a~~~a~~~~-ni~~i~~d  112 (209)
T d1nt2a_          39 RSKLAAMILKG-HRLKLRGDERVLYLGAASGTTVSHLADI----VDEGIIYAVEYSAKPFEKLLELVRERN-NIIPLLFD  112 (209)
T ss_dssp             GCHHHHHHHTS-CCCCCCSSCEEEEETCTTSHHHHHHHHH----TTTSEEEEECCCHHHHHHHHHHHHHCS-SEEEECSC
T ss_pred             chHHHHHHhcc-ccCCCCCCCEEEEeCCcCCHHHHHHHHh----ccCCeEEEEeCCHHHHHHHHHHhhccC-CceEEEee
Confidence            44566655543 2344579999999999999999888887    456699999999999999999887654 33788888


Q ss_pred             hhhchhh-hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          104 IASGLEK-RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       104 ~~~~~~~-~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ....... .....+|+|+.+.++.                       .....++.++.+.|||||+++++.
T Consensus       113 ~~~~~~~~~~~~~vd~v~~~~~~~-----------------------~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         113 ASKPWKYSGIVEKVDLIYQDIAQK-----------------------NQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             TTCGGGTTTTCCCEEEEEECCCST-----------------------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccCccccccccceEEEEEecccCh-----------------------hhHHHHHHHHHHHhccCCeEEEEE
Confidence            7765322 2234678887765432                       124678999999999999999865


No 45 
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}
Probab=99.64  E-value=3.9e-16  Score=126.24  Aligned_cols=101  Identities=17%  Similarity=0.211  Sum_probs=78.1

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      .++.+|||+|||+|.++..+++.      +++|+|+|+|+.|++.|+++.    . ..++.+|+.+.  ++.+++||+|+
T Consensus        41 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~giD~s~~~l~~a~~~~----~-~~~~~~~~~~l--~~~~~~fD~ii  107 (246)
T d2avna1          41 KNPCRVLDLGGGTGKWSLFLQER------GFEVVLVDPSKEMLEVAREKG----V-KNVVEAKAEDL--PFPSGAFEAVL  107 (246)
T ss_dssp             CSCCEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHHT----C-SCEEECCTTSC--CSCTTCEEEEE
T ss_pred             CCCCEEEEECCCCchhccccccc------ceEEEEeeccccccccccccc----c-ccccccccccc--cccccccccee
Confidence            46789999999999998777654      569999999999999998763    1 25777888775  34568999999


Q ss_pred             ECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211          121 VNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus       121 ~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                      +.- .+++.++                     ...+++++.++|||||++++..++
T Consensus       108 ~~~~~~~~~~d---------------------~~~~l~~i~r~Lk~gG~~ii~~~~  142 (246)
T d2avna1         108 ALGDVLSYVEN---------------------KDKAFSEIRRVLVPDGLLIATVDN  142 (246)
T ss_dssp             ECSSHHHHCSC---------------------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             eecchhhhhhh---------------------HHHHHHHHHhhcCcCcEEEEEECC
Confidence            842 2222221                     467899999999999999997653


No 46 
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=99.64  E-value=4.3e-16  Score=123.96  Aligned_cols=113  Identities=14%  Similarity=0.174  Sum_probs=88.4

Q ss_pred             HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211           25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD  103 (256)
Q Consensus        25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d  103 (256)
                      -.++..+++.+.   .+++.+|||+|||+|.++..+++.++   +++.|+++|+++++++.|++++...+..+ .++++|
T Consensus        61 P~~~a~~l~~l~---l~~g~~VLdiG~GtG~~s~~la~~~~---~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d  134 (213)
T d1dl5a1          61 PSLMALFMEWVG---LDKGMRVLEIGGGTGYNAAVMSRVVG---EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD  134 (213)
T ss_dssp             HHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             chhhHHHHHhhh---ccccceEEEecCccchhHHHHHHHhC---CCCcEEEeecchhhHHHhhhhHhhhcccccccccCc
Confidence            355566666654   36899999999999999998888763   56799999999999999999999988876 788899


Q ss_pred             hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      ..+....  .++||+|+++....+                           +.+.+.+.|||||++++.
T Consensus       135 ~~~~~~~--~~~fD~I~~~~~~~~---------------------------~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         135 GYYGVPE--FSPYDVIFVTVGVDE---------------------------VPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GGGCCGG--GCCEEEEEECSBBSC---------------------------CCHHHHHHEEEEEEEEEE
T ss_pred             hHHcccc--ccchhhhhhhccHHH---------------------------hHHHHHHhcCCCcEEEEE
Confidence            8776443  478999999754321                           122345679999999873


No 47 
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.64  E-value=8.8e-15  Score=121.41  Aligned_cols=123  Identities=14%  Similarity=0.176  Sum_probs=91.0

Q ss_pred             HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcch
Q 025211           27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDI  104 (256)
Q Consensus        27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~  104 (256)
                      ..+.+.+.+.   .+++.+|||||||.|.+++.+++.    + +++|+|+++|++.++.+++++...++..  .+...|.
T Consensus        49 k~~~~~~~l~---l~~G~~VLDiGCG~G~~~~~~a~~----~-g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~  120 (291)
T d1kpia_          49 KRKLALDKLN---LEPGMTLLDIGCGWGSTMRHAVAE----Y-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW  120 (291)
T ss_dssp             HHHHHHHTTC---CCTTCEEEEETCTTSHHHHHHHHH----H-CCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG
T ss_pred             HHHHHHHhcC---CCCCCEEEEecCcchHHHHHHHHh----c-CcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc
Confidence            3444555543   378999999999999998888776    3 4799999999999999999999888765  5666665


Q ss_pred             hhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          105 ASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       105 ~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      ..     .+++||.|++.--+-+.++..            +..+...+..+++.+.++|||||++++-+.
T Consensus       121 ~~-----~~~~fD~i~sie~~eH~~~~~------------~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i  173 (291)
T d1kpia_         121 EE-----FDEPVDRIVSLGAFEHFADGA------------GDAGFERYDTFFKKFYNLTPDDGRMLLHTI  173 (291)
T ss_dssp             GG-----CCCCCSEEEEESCGGGTTCCS------------SCCSTTHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             cc-----cccccceEeechhHHhcchhh------------hhhHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence            32     357999999954332222110            112334588999999999999999998543


No 48 
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}
Probab=99.64  E-value=2.4e-15  Score=118.86  Aligned_cols=118  Identities=18%  Similarity=0.209  Sum_probs=91.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      ++.+|||+|||+|.++..+    .      .++|+|+|+.+++.|+++      ...++++|+.+.  ++.+++||+|++
T Consensus        36 ~~~~vLDiGcG~G~~~~~~----~------~~~giD~s~~~~~~a~~~------~~~~~~~d~~~l--~~~~~~fD~I~~   97 (208)
T d1vlma_          36 PEGRGVEIGVGTGRFAVPL----K------IKIGVEPSERMAEIARKR------GVFVLKGTAENL--PLKDESFDFALM   97 (208)
T ss_dssp             CSSCEEEETCTTSTTHHHH----T------CCEEEESCHHHHHHHHHT------TCEEEECBTTBC--CSCTTCEEEEEE
T ss_pred             CCCeEEEECCCCccccccc----c------eEEEEeCChhhccccccc------cccccccccccc--cccccccccccc
Confidence            5678999999999875332    2      468999999999998874      248999998876  334689999999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-----------------------C
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-----------------------D  178 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------------------~  178 (256)
                      .-.+.+.++                     ...+++++.++|+|||.+++..+...                       .
T Consensus        98 ~~~l~h~~d---------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  156 (208)
T d1vlma_          98 VTTICFVDD---------------------PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFS  156 (208)
T ss_dssp             ESCGGGSSC---------------------HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCC
T ss_pred             ccccccccc---------------------cccchhhhhhcCCCCceEEEEecCCcchhHHhhhhccccccccccccCCC
Confidence            765544432                     56889999999999999999775432                       2


Q ss_pred             HHHHHHHHHHcCCcEEEEEe
Q 025211          179 PSQICLQMMEKGYAARIVVQ  198 (256)
Q Consensus       179 ~~~~~~~~~~~g~~~~~~~~  198 (256)
                      ..++.+++++.||+.+.+..
T Consensus       157 ~~~l~~~l~~~Gf~~i~v~~  176 (208)
T d1vlma_         157 TEELMDLMRKAGFEEFKVVQ  176 (208)
T ss_dssp             HHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHHHHcCCeEEEEEE
Confidence            46788999999998765543


No 49 
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.63  E-value=8.2e-15  Score=121.23  Aligned_cols=114  Identities=18%  Similarity=0.200  Sum_probs=88.0

Q ss_pred             HHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhh
Q 025211           29 DALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIAS  106 (256)
Q Consensus        29 ~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~  106 (256)
                      +.+.+.+.   .+++.+|||||||.|.+++.+++.    . +++|+|+++|++.++.|++++...++..  ++..+|..+
T Consensus        52 ~~~~~~l~---l~~G~~VLDiGCG~G~~a~~~a~~----~-g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~  123 (285)
T d1kpga_          52 DLALGKLG---LQPGMTLLDVGCGWGATMMRAVEK----Y-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ  123 (285)
T ss_dssp             HHHHTTTT---CCTTCEEEEETCTTSHHHHHHHHH----H-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred             HHHHHHcC---CCCCCEEEEecCcchHHHHHHHhc----C-CcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhc
Confidence            44444443   479999999999999999888876    3 5899999999999999999998887654  788888755


Q ss_pred             chhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          107 GLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       107 ~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      .     +++||.|++---+-+               .+..    .+..+++.+.++|||||++++-+.
T Consensus       124 ~-----~~~fD~i~si~~~eh---------------~~~~----~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         124 F-----DEPVDRIVSIGAFEH---------------FGHE----RYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             C-----CCCCSEEEEESCGGG---------------TCTT----THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             c-----cccccceeeehhhhh---------------cCch----hHHHHHHHHHhhcCCCCcEEEEEE
Confidence            4     478999999432211               1111    267899999999999999997443


No 50 
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}
Probab=99.63  E-value=1.6e-15  Score=121.61  Aligned_cols=121  Identities=16%  Similarity=0.138  Sum_probs=90.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      ++++|||+|||+|.++..+++.      +.+|+|+|+|+++++.|+++..   ....++++|+.+...   +++||+|++
T Consensus        20 ~~~~VLDiGcG~G~~~~~l~~~------g~~v~giD~s~~~i~~a~~~~~---~~~~~~~~~~~~~~~---~~~fD~I~~   87 (225)
T d2p7ia1          20 RPGNLLELGSFKGDFTSRLQEH------FNDITCVEASEEAISHAQGRLK---DGITYIHSRFEDAQL---PRRYDNIVL   87 (225)
T ss_dssp             CSSCEEEESCTTSHHHHHHTTT------CSCEEEEESCHHHHHHHHHHSC---SCEEEEESCGGGCCC---SSCEEEEEE
T ss_pred             CCCcEEEEeCCCcHHHHHHHHc------CCeEEEEeCcHHHhhhhhcccc---ccccccccccccccc---ccccccccc
Confidence            5779999999999987655443      3589999999999999987642   234888888877632   578999999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh-hccccCeEEEEEEeCCC-----------------------
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD-KLLSKRGWLYLVTLTAN-----------------------  177 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~-----------------------  177 (256)
                      .-.+.+.++                     ...++.++. ++|+|||++++..+...                       
T Consensus        88 ~~vleh~~d---------------------~~~~l~~i~~~~Lk~gG~l~i~~pn~~~~~~~~~~~~~~~~~~~~~~~~~  146 (225)
T d2p7ia1          88 THVLEHIDD---------------------PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAE  146 (225)
T ss_dssp             ESCGGGCSS---------------------HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHH
T ss_pred             cceeEecCC---------------------HHHHHHHHHHHhcCCCceEEEEeCCcccHHHHHHHHhhhhhhhhhcCccc
Confidence            765544433                     457788887 78999999999775322                       


Q ss_pred             ---------CHHHHHHHHHHcCCcEEE
Q 025211          178 ---------DPSQICLQMMEKGYAARI  195 (256)
Q Consensus       178 ---------~~~~~~~~~~~~g~~~~~  195 (256)
                               ....+.+.+.+.||+...
T Consensus       147 ~~~~h~~~~~~~~l~~~l~~~Gf~i~~  173 (225)
T d2p7ia1         147 FAHGHRCTYALDTLERDASRAGLQVTY  173 (225)
T ss_dssp             HHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred             cceeeeeccCHHHHHHHHHHCCCEEEE
Confidence                     234677788888887544


No 51 
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=99.63  E-value=8e-15  Score=119.79  Aligned_cols=143  Identities=15%  Similarity=0.191  Sum_probs=108.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      ...+|||||||+|.++..+++.    +|+.+++++|+ +++++.+++++...+...  .++.+|+.+..    +.++|+|
T Consensus        81 ~~~~vlDvG~G~G~~~~~l~~~----~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~~~----p~~~D~v  151 (256)
T d1qzza2          81 AVRHVLDVGGGNGGMLAAIALR----APHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL----PVTADVV  151 (256)
T ss_dssp             TCCEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC----SCCEEEE
T ss_pred             cCCEEEEECCCCCHHHHHHHHh----hcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccccc----cccchhh
Confidence            4579999999999998888887    89999999997 889999999999888754  78888887643    2469999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-----------------------  176 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------  176 (256)
                      ++.-.+++.++.                   ....+|+++++.|||||+++++....                       
T Consensus       152 ~~~~vLh~~~d~-------------------~~~~lL~~i~~~LkpgG~llI~d~~~~~~~~~~~~~~~~~d~~ml~~~~  212 (256)
T d1qzza2         152 LLSFVLLNWSDE-------------------DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG  212 (256)
T ss_dssp             EEESCGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS
T ss_pred             hccccccccCcH-------------------HHHHHHHHHHhhcCCcceeEEEEeccCCCCcccHHHHHHHHHHHHhhCC
Confidence            996655443332                   25688999999999999999876311                       


Q ss_pred             ---CCHHHHHHHHHHcCCcEEEEEecCC--CCccEEEEEEE
Q 025211          177 ---NDPSQICLQMMEKGYAARIVVQRST--EEENLHIIKFW  212 (256)
Q Consensus       177 ---~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~l~~~~  212 (256)
                         ...+++.+++++.||+.+.+.....  ....+.++++.
T Consensus       213 g~~rt~~e~~~ll~~AGf~~~~~~~~~~~~~~~~~~v~E~~  253 (256)
T d1qzza2         213 GRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFT  253 (256)
T ss_dssp             CCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEE
T ss_pred             CccCCHHHHHHHHHHCCCceeEEEEeCCcCccCceEEEEEE
Confidence               1245778888899998877665432  33455666654


No 52 
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63  E-value=8.4e-16  Score=123.69  Aligned_cols=111  Identities=13%  Similarity=-0.016  Sum_probs=86.1

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      .++++|||||||+|..+..+++.    . ..+++|+|+|+.+++.|+++....+....++..++......+.+++||.|+
T Consensus        52 ~~g~~VLdIGcG~G~~a~~~a~~----~-~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~  126 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAIAASKVQEA----P-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL  126 (229)
T ss_dssp             TTCEEEEEECCTTSHHHHHHHTS----C-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred             cCCCeEEEeeccchHHHHHHHHc----C-CCeEEEeCCCHHHHHHHHHHhhhccccccccccccccccccccccccccee
Confidence            47899999999999987766654    3 358999999999999999998776666688888887776666678999999


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      .+........                ........+++.+.++|||||++++.
T Consensus       127 fD~~~~~~~~----------------~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         127 YDTYPLSEET----------------WHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             ECCCCCBGGG----------------TTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             eccccccccc----------------ccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            8764321110                01223678899999999999999873


No 53 
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}
Probab=99.61  E-value=9.4e-15  Score=113.39  Aligned_cols=125  Identities=17%  Similarity=0.219  Sum_probs=91.7

Q ss_pred             ccccCCc--hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC
Q 025211           17 VYEPCDD--SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN   94 (256)
Q Consensus        17 ~~~p~~~--~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~   94 (256)
                      ..+|+++  .+.+.+++...+      .+.+|||++||||.++++++..    +. ..|+.||.+..+++.+++|++..+
T Consensus        22 ~~RPt~~~vrealFn~l~~~~------~~~~vLDlFaGsG~~glEalSR----GA-~~v~fVE~~~~a~~~ik~Ni~~l~   90 (183)
T d2ifta1          22 GLRPTGDRVKETLFNWLMPYI------HQSECLDGFAGSGSLGFEALSR----QA-KKVTFLELDKTVANQLKKNLQTLK   90 (183)
T ss_dssp             ------CHHHHHHHHHHHHHH------TTCEEEETTCTTCHHHHHHHHT----TC-SEEEEECSCHHHHHHHHHHHHHTT
T ss_pred             CcCcCcHHHHHHHHHHhhhhc------ccceEeecccCccceeeeeeee----cc-eeeEEeecccchhhhHhhHHhhhc
Confidence            5788887  777777776654      5789999999999999999876    33 389999999999999999999887


Q ss_pred             Ccc---eEEEcchhhchhhh-cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHh--hccccCeE
Q 025211           95 VHA---DLINTDIASGLEKR-LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSAD--KLLSKRGW  168 (256)
Q Consensus        95 ~~~---~~~~~d~~~~~~~~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~  168 (256)
                      ...   .++..|..+..... ...+||+|+++|||...                      ....++..+.  .+|+++|.
T Consensus        91 ~~~~~~~~~~~d~~~~l~~~~~~~~fDlIFlDPPY~~~----------------------~~~~~l~~l~~~~~L~~~~l  148 (183)
T d2ifta1          91 CSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFN----------------------LAEQAISLLCENNWLKPNAL  148 (183)
T ss_dssp             CCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSSSC----------------------HHHHHHHHHHHTTCEEEEEE
T ss_pred             ccccccccccccccccccccccCCcccEEEechhHhhh----------------------hHHHHHHHHHHhCCcCCCcE
Confidence            643   66777777665432 24569999999999531                      1445566554  57999999


Q ss_pred             EEEEEe
Q 025211          169 LYLVTL  174 (256)
Q Consensus       169 l~~~~~  174 (256)
                      +++-+.
T Consensus       149 iiiE~~  154 (183)
T d2ifta1         149 IYVETE  154 (183)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            998544


No 54 
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60  E-value=3e-15  Score=121.94  Aligned_cols=153  Identities=12%  Similarity=0.085  Sum_probs=99.5

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcce----------------------
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHAD----------------------   98 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~----------------------   98 (256)
                      .++.+|||+|||+|..++.++..    + ...|+|+|+|+.+++.|++++........                      
T Consensus        50 ~~g~~vLDlGcG~G~~~~~~~~~----~-~~~v~giD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (257)
T d2a14a1          50 LQGDTLIDIGSGPTIYQVLAACD----S-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKE  124 (257)
T ss_dssp             CCEEEEEESSCTTCCGGGTTGGG----T-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred             CCCCEEEEECCCCCHhHHHHhcc----c-cCcEEEecCCHHHHHHHHHHHhhccccchhhhHHHHHHHhccccchHHHHH
Confidence            46789999999999865433322    2 23799999999999999999876543210                      


Q ss_pred             ---------EEEcchh--hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCe
Q 025211           99 ---------LINTDIA--SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRG  167 (256)
Q Consensus        99 ---------~~~~d~~--~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG  167 (256)
                               ....+..  ....+...++||+|++...+.+.+.                 ....+..+++++.++|||||
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~~~~~-----------------~~~~~~~~l~~i~~~LkpGG  187 (257)
T d2a14a1         125 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC-----------------SLDAYRAALCNLASLLKPGG  187 (257)
T ss_dssp             HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS-----------------SHHHHHHHHHHHHTTEEEEE
T ss_pred             HHHhhhhhcccccccccccccccccCCcccEEeehhhHHHhcc-----------------cHHHHHHHHHHHHhccCCCc
Confidence                     1111111  1112334678999999543322111                 12346788999999999999


Q ss_pred             EEEEEEeCC---------------CCHHHHHHHHHHcCCcEEEEEec-------CCCCccEEEEEEEecC
Q 025211          168 WLYLVTLTA---------------NDPSQICLQMMEKGYAARIVVQR-------STEEENLHIIKFWRDF  215 (256)
Q Consensus       168 ~l~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~~~~~~~  215 (256)
                      ++++.....               -..+++.+.+++.||++..+...       ......++++.++|++
T Consensus       188 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~~~~~~~~~~~~~~~v~arKkp  257 (257)
T d2a14a1         188 HLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKP  257 (257)
T ss_dssp             EEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC
T ss_pred             EEEEEEecccccceeccccccccCCCHHHHHHHHHHCCCEEEEEEEeccccccccCCCCcEEEEEEEeCc
Confidence            999976432               24678999999999986554321       1223446666666653


No 55 
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.60  E-value=1.2e-14  Score=120.96  Aligned_cols=125  Identities=13%  Similarity=0.105  Sum_probs=86.6

Q ss_pred             HHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-----eEEE
Q 025211           27 LVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-----DLIN  101 (256)
Q Consensus        27 l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-----~~~~  101 (256)
                      ..+++.+.+.   ..++++|||+|||+|.+++.+++.      ++.|+|+|+|+.|++.|+++....+...     .+..
T Consensus        44 ~~~~l~~~l~---~~~~~~vLD~GcG~G~~~~~la~~------g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~  114 (292)
T d1xvaa_          44 YKAWLLGLLR---QHGCHRVLDVACGTGVDSIMLVEE------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE  114 (292)
T ss_dssp             HHHHHHHHHH---HTTCCEEEESSCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE
T ss_pred             HHHHHHHHhh---hcCCCEEEEecCCCcHHHHHHHHc------CCeeeeccCchHHHHHHHHHHHhcccccccceeeeee
Confidence            3455555443   246789999999999998888775      4689999999999999999987766543     4555


Q ss_pred             cchhhchhhh-cCCCccEEEECC-CCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          102 TDIASGLEKR-LAGLVDVMVVNP-PYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       102 ~d~~~~~~~~-~~~~fD~Ii~np-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      .++....... ...+||+|+|-. .+.+.+..              .........+++++.++|||||++++...
T Consensus       115 ~~~~~~~~~~~~~~~fd~v~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~LkpgG~li~~~~  175 (292)
T d1xvaa_         115 ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDS--------------KGDQSEHRLALKNIASMVRPGGLLVIDHR  175 (292)
T ss_dssp             CCGGGHHHHSCCTTCEEEEEECSSCGGGSCCT--------------TSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccccccccccCCCCCceEEEEecCchhhcCCc--------------ccChHHHHHHHHHHHHHcCcCcEEEEeec
Confidence            5654432221 246899999832 22222111              11123467899999999999999998554


No 56 
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.59  E-value=2e-14  Score=125.68  Aligned_cols=161  Identities=17%  Similarity=0.191  Sum_probs=111.8

Q ss_pred             CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCC---------ceEEEEeCCHHHHHHH
Q 025211           16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPG---------VQYIATDINPYAVEVT   86 (256)
Q Consensus        16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~---------~~v~giD~~~~~i~~a   86 (256)
                      .+|+|++...++++    .+.   +.++.+|+|++||+|.+++++.+.+.+....         ..++|+|+++.++..|
T Consensus       143 ~f~TP~~Iv~~mv~----ll~---~~~~~~IlDPacGsG~fL~~a~~~~~~~~~~~~~~~~~~~~~l~g~E~~~~~~~la  215 (425)
T d2okca1         143 QYFTPRPLIQAMVD----CIN---PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLA  215 (425)
T ss_dssp             GGCCCHHHHHHHHH----HHC---CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHH
T ss_pred             hhccchhhhHhhhe----ecc---CcccceeeccccccCccHHHHHHHHHhhccchhhhhhhhhhhhhhhhccHHHHHHH
Confidence            48999655555444    332   2467899999999999999998877644322         3599999999999999


Q ss_pred             HHHHHHcCCcc---eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcc
Q 025211           87 RKTLEAHNVHA---DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLL  163 (256)
Q Consensus        87 ~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  163 (256)
                      +-|+..++...   .+...|.....   ...+||+|++||||............  ..+..+..  .....++..+.++|
T Consensus       216 ~~n~~l~g~~~~~~~i~~~d~l~~~---~~~~fD~Ii~NPPfg~~~~~~~~~~~--~~~~~~~~--~~~~~Fi~~~~~~L  288 (425)
T d2okca1         216 SMNLYLHGIGTDRSPIVCEDSLEKE---PSTLVDVILANPPFGTRPAGSVDINR--PDFYVETK--NNQLNFLQHMMLML  288 (425)
T ss_dssp             HHHHHHTTCCSSCCSEEECCTTTSC---CSSCEEEEEECCCSSCCCTTCCCCCC--TTSSSCCS--CHHHHHHHHHHHHE
T ss_pred             HhhhhhcCCccccceeecCchhhhh---cccccceEEecCCCCCCccccchhhh--hhcccccc--cHHHHHHHHHHHhc
Confidence            99999888753   67788876542   24689999999999765543322111  11111111  12456889999999


Q ss_pred             ccCeEEEEEEeCC---C--CHHHHHHHHHHcC
Q 025211          164 SKRGWLYLVTLTA---N--DPSQICLQMMEKG  190 (256)
Q Consensus       164 kpgG~l~~~~~~~---~--~~~~~~~~~~~~g  190 (256)
                      ++||++.++.+..   .  ....+++.+.+.+
T Consensus       289 k~~G~~~iI~p~~~L~~~~~~~~iR~~Ll~~~  320 (425)
T d2okca1         289 KTGGRAAVVLPDNVLFEAGAGETIRKRLLQDF  320 (425)
T ss_dssp             EEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHE
T ss_pred             CCCCeEEEEechHHhhhhhhHHHHHHHHHHhc
Confidence            9999999988732   2  1246677776654


No 57 
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=4.7e-15  Score=118.69  Aligned_cols=115  Identities=19%  Similarity=0.180  Sum_probs=86.3

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-----c-eE
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-----A-DL   99 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-----~-~~   99 (256)
                      .++..+++.+.. ..+++.+|||+|||+|..+..++++++   +..+|+++|+++++++.|++++...++.     . .+
T Consensus        61 ~~~a~~le~L~~-~l~~g~~VLdiG~GsGy~ta~la~l~~---~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~  136 (224)
T d1i1na_          61 HMHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVG---CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQL  136 (224)
T ss_dssp             HHHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEE
T ss_pred             HHHHHHHHHHhh-ccCCCCeEEEecCCCCHHHHHHHHHhC---CCceEEEEcCCHHHHHHHHHhccccCcccccccceEE
Confidence            345556665421 125889999999999999988888763   5679999999999999999999876653     2 78


Q ss_pred             EEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          100 INTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       100 ~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      +.+|......+  .+.||.|+++....                           .+.+.+.+.|||||++++..
T Consensus       137 ~~gD~~~~~~~--~~~fD~I~~~~~~~---------------------------~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         137 VVGDGRMGYAE--EAPYDAIHVGAAAP---------------------------VVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             EESCGGGCCGG--GCCEEEEEECSBBS---------------------------SCCHHHHHTEEEEEEEEEEE
T ss_pred             EEeecccccch--hhhhhhhhhhcchh---------------------------hcCHHHHhhcCCCcEEEEEE
Confidence            88998776443  47899999964322                           11234567899999999843


No 58 
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.58  E-value=1.1e-14  Score=113.74  Aligned_cols=73  Identities=22%  Similarity=0.386  Sum_probs=59.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      -.|++|||+|||+|.+++.++..    ++ ..|+|+|+++.+++.|++|+.    ..+++++|+.+.     +++||+|+
T Consensus        47 l~Gk~VLDlGcGtG~l~i~a~~~----ga-~~V~~vDid~~a~~~ar~N~~----~~~~~~~D~~~l-----~~~fD~Vi  112 (197)
T d1ne2a_          47 IGGRSVIDAGTGNGILACGSYLL----GA-ESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEI-----SGKYDTWI  112 (197)
T ss_dssp             SBTSEEEEETCTTCHHHHHHHHT----TB-SEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGC-----CCCEEEEE
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHc----CC-CcccccccCHHHHHHHHHccc----cccEEEEehhhc-----CCcceEEE
Confidence            47899999999999998877765    22 379999999999999998853    348999998664     47899999


Q ss_pred             ECCCCCC
Q 025211          121 VNPPYVP  127 (256)
Q Consensus       121 ~npP~~~  127 (256)
                      +||||..
T Consensus       113 ~NPPfg~  119 (197)
T d1ne2a_         113 MNPPFGS  119 (197)
T ss_dssp             ECCCC--
T ss_pred             eCcccch
Confidence            9999953


No 59 
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=2.3e-14  Score=118.40  Aligned_cols=132  Identities=9%  Similarity=0.102  Sum_probs=92.2

Q ss_pred             hHHHHHHHHHhhccc----c-cCCCCEEEEecccccHHHHHHHHHhcccCCC--ceEEEEeCCHHHHHHHHHHHHHcC-C
Q 025211           24 SFALVDALLADRINL----V-EHHPVLCMEVGCGSGYVITSLALMLGQEVPG--VQYIATDINPYAVEVTRKTLEAHN-V   95 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~----~-~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~--~~v~giD~~~~~i~~a~~~~~~~~-~   95 (256)
                      ...+-+++.+.++.+    . .++..+|||+|||+|.++..++..+...+++  ..++|+|+|+.|++.+++++.... .
T Consensus        17 ~~~~~~~~~~~l~~~l~~l~~~~~~~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~   96 (280)
T d1jqea_          17 HQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNL   96 (280)
T ss_dssp             HHHHHHHHHHTHHHHTTTTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhcccc
Confidence            444445544444322    1 2344589999999999998888877655554  468999999999999999886532 2


Q ss_pred             cc---eEEEcchhhch----hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeE
Q 025211           96 HA---DLINTDIASGL----EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGW  168 (256)
Q Consensus        96 ~~---~~~~~d~~~~~----~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~  168 (256)
                      ..   .+...++.+..    ....+++||+|++.-.+++.++                     ...+++.+.++|+|||.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d---------------------~~~~l~~l~~~LkpgG~  155 (280)
T d1jqea_          97 ENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD---------------------IPATLKFFHSLLGTNAK  155 (280)
T ss_dssp             TTEEEEEECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCSC---------------------HHHHHHHHHHTEEEEEE
T ss_pred             ccccccchhhhhhhhcchhcccCCCCceeEEEEccceecCCC---------------------HHHHHHHHHhhCCCCCE
Confidence            22   45566554432    2234688999999766554433                     56889999999999999


Q ss_pred             EEEEEeCC
Q 025211          169 LYLVTLTA  176 (256)
Q Consensus       169 l~~~~~~~  176 (256)
                      ++++....
T Consensus       156 l~i~~~~~  163 (280)
T d1jqea_         156 MLIIVVSG  163 (280)
T ss_dssp             EEEEEECT
T ss_pred             EEEEEecC
Confidence            99877543


No 60 
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=99.56  E-value=3e-14  Score=113.43  Aligned_cols=178  Identities=17%  Similarity=0.190  Sum_probs=109.4

Q ss_pred             ccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc
Q 025211           17 VYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH   96 (256)
Q Consensus        17 ~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~   96 (256)
                      +|+|.    .+++.+++.+.   ..++.+|||+|||+|.++.++.+..   .....++|+|+++.+++.++        .
T Consensus         1 v~TP~----~i~~~m~~l~~---~~~~~~IlDp~~G~G~fl~~~~~~~---~~~~~i~g~ei~~~~~~~~~--------~   62 (223)
T d2ih2a1           1 VETPP----EVVDFMVSLAE---APRGGRVLEPACAHGPFLRAFREAH---GTAYRFVGVEIDPKALDLPP--------W   62 (223)
T ss_dssp             CCCCH----HHHHHHHHHCC---CCTTCEEEEETCTTCHHHHHHHHHH---CSCSEEEEEESCTTTCCCCT--------T
T ss_pred             CCCCH----HHHHHHHHhcC---CCCcCEEEECCCchHHHHHHHHHhc---cccceEEeeecCHHHHhhcc--------c
Confidence            57884    44455554443   2578899999999999988776653   23468999999987654332        2


Q ss_pred             ceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccc-------hh-hhcCCCCcHHHHHHHHHHHhhccccCeE
Q 025211           97 ADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGI-------AS-AWAGGENGRAVIDKILPSADKLLSKRGW  168 (256)
Q Consensus        97 ~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~  168 (256)
                      ..++++|......   ...||+|++||||.............       .. .........+....++..+.+.|++||+
T Consensus        63 ~~~~~~~~~~~~~---~~~fd~ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fi~~al~~lk~~G~  139 (223)
T d2ih2a1          63 AEGILADFLLWEP---GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGV  139 (223)
T ss_dssp             EEEEESCGGGCCC---SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEE
T ss_pred             ceeeeeehhcccc---ccccceecccCccccccccccccchhhhhhhhhhhhccccCCCcchHHHHHHHHHHHhcccCCc
Confidence            3778888766532   36899999999997654432211111       00 1111122223456788999999999999


Q ss_pred             EEEEEeCCC----CHHHHHHHHHHcCCcEEEEEecCC--CCccEEEEEEEecC
Q 025211          169 LYLVTLTAN----DPSQICLQMMEKGYAARIVVQRST--EEENLHIIKFWRDF  215 (256)
Q Consensus       169 l~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~l~~~~~~~  215 (256)
                      +.++.+..-    ....+++++.+.+.-.........  ......++.+.|..
T Consensus       140 ~~~I~p~~~l~~~~~~~lR~~l~~~~~i~i~~~~~~F~~~~v~t~i~~~~k~~  192 (223)
T d2ih2a1         140 LVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSG  192 (223)
T ss_dssp             EEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEEEESCSTTCCCCEEEEEEESSS
T ss_pred             eEEEEeeeeccCcchHHHHHHHHhcCCEEEEcchhcCCCCCCcEEEEEEEeCC
Confidence            999887432    345677777766432222222221  22344555555543


No 61 
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=99.51  E-value=1.5e-13  Score=117.44  Aligned_cols=153  Identities=14%  Similarity=0.183  Sum_probs=112.3

Q ss_pred             eeccCC-ccccCCc-hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           11 VSSHPE-VYEPCDD-SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        11 ~~~~~~-~~~p~~~-~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      +.+.|+ ++++.+. .+.+++.+++.+.   ..++.+|||+.||+|.+++.+++.      ..+|+|+|+++.+++.|++
T Consensus       182 ~~i~p~sFfQ~N~~~~e~l~~~v~~~~~---~~~~~~vlDLycG~G~fsl~La~~------~~~V~gvE~~~~ai~~A~~  252 (358)
T d1uwva2         182 LTFSPRDFIQVNAGVNQKMVARALEWLD---VQPEDRVLDLFCGMGNFTLPLATQ------AASVVGVEGVPALVEKGQQ  252 (358)
T ss_dssp             EECCSSSCCCSBHHHHHHHHHHHHHHHT---CCTTCEEEEESCTTTTTHHHHHTT------SSEEEEEESCHHHHHHHHH
T ss_pred             EEECCchhhccchhhhhHHHHHHHHhhc---cCCCceEEEecccccccchhcccc------ccEEEeccCcHHHHHHHHH
Confidence            344554 7888877 7888888887764   256789999999999999988875      3489999999999999999


Q ss_pred             HHHHcCCcc-eEEEcchhhchhh--hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc
Q 025211           89 TLEAHNVHA-DLINTDIASGLEK--RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK  165 (256)
Q Consensus        89 ~~~~~~~~~-~~~~~d~~~~~~~--~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp  165 (256)
                      |+..|++.+ .++.+|..+.+..  .....+|+||.|||=.                     |   ..+.+..+.+ ++|
T Consensus       253 na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~---------------------G---~~~~~~~l~~-~~~  307 (358)
T d1uwva2         253 NARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARA---------------------G---AAGVMQQIIK-LEP  307 (358)
T ss_dssp             HHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTT---------------------C---CHHHHHHHHH-HCC
T ss_pred             hHHhcccccceeeecchhhhhhhhhhhhccCceEEeCCCCc---------------------c---HHHHHHHHHH-cCC
Confidence            999999987 9999998876542  2346799999999921                     1   1234555554 477


Q ss_pred             CeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211          166 RGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ  198 (256)
Q Consensus       166 gG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  198 (256)
                      .-++|+++.+.+...++. .+.+.||....+..
T Consensus       308 ~~ivYVSCnp~TlaRDl~-~l~~~gy~l~~i~~  339 (358)
T d1uwva2         308 IRIVYVSCNPATLARDSE-ALLKAGYTIARLAM  339 (358)
T ss_dssp             SEEEEEESCHHHHHHHHH-HHHHTTCEEEEEEE
T ss_pred             CEEEEEeCCHHHHHHHHH-HHHHCCCeEeEEEE
Confidence            777777654444444443 34467888766553


No 62 
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Probab=99.49  E-value=4e-13  Score=120.25  Aligned_cols=161  Identities=9%  Similarity=0.109  Sum_probs=107.2

Q ss_pred             CCccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCC--------------ceEEEEeCCH
Q 025211           15 PEVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPG--------------VQYIATDINP   80 (256)
Q Consensus        15 ~~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~--------------~~v~giD~~~   80 (256)
                      ..+|+|+....++++.    +.   +.++.+|+|++||+|.+++.+.+.+......              ..++|+|+++
T Consensus       144 GqfyTP~~Iv~~mv~l----l~---~~~~~~i~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~E~~~  216 (524)
T d2ar0a1         144 GQYFTPRPLIKTIIHL----LK---PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVP  216 (524)
T ss_dssp             -CCCCCHHHHHHHHHH----HC---CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCH
T ss_pred             chhccccchhHhhhhc----cc---CccchhhcchhhhcchhhHHHHHHHHHhcCcccccchhHHHHHHHhhhhhhccCH
Confidence            4499997655555543    32   2467899999999999999888876543321              2699999999


Q ss_pred             HHHHHHHHHHHHcCCcc------eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHH
Q 025211           81 YAVEVTRKTLEAHNVHA------DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDK  154 (256)
Q Consensus        81 ~~i~~a~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
                      .++..|+-|+..++...      .+...+..... .....+||+|++||||...........     ......  .....
T Consensus       217 ~~~~la~~nl~l~~~~~~i~~~~~~~~~~~l~~d-~~~~~kfD~Ii~NPPfg~~~~~~~~~~-----~~~~~~--~~~~~  288 (524)
T d2ar0a1         217 GTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSD-GENLPKAHIVATNPPFGSAAGTNITRT-----FVHPTS--NKQLC  288 (524)
T ss_dssp             HHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHH-HHTSCCEEEEEECCCCTTCSSCCCCSC-----CSSCCS--CHHHH
T ss_pred             HHHHHHHHHHHhhcccccccccchhhhhhhhhhc-ccccccceeEEecCCccccccccchhh-----hccccc--cccHH
Confidence            99999999998877643      34444443321 112467999999999976544321110     011111  11345


Q ss_pred             HHHHHhhccccCeEEEEEEeCC---C-C-HHHHHHHHHHcC
Q 025211          155 ILPSADKLLSKRGWLYLVTLTA---N-D-PSQICLQMMEKG  190 (256)
Q Consensus       155 ~l~~~~~~LkpgG~l~~~~~~~---~-~-~~~~~~~~~~~g  190 (256)
                      +++.+.+.|++||++.++.|..   + . ...+++.+.+.+
T Consensus       289 Fi~~~l~~Lk~gGr~aiIlP~~~Lf~~~~~~~iR~~Ll~~~  329 (524)
T d2ar0a1         289 FMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKC  329 (524)
T ss_dssp             HHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHE
T ss_pred             HHHHHHHhccccCcEEEEEehHHhhhhhhhHHHHHHHHHcC
Confidence            8899999999999999988732   1 2 245677776654


No 63 
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.49  E-value=2.6e-13  Score=105.62  Aligned_cols=141  Identities=11%  Similarity=0.175  Sum_probs=102.2

Q ss_pred             HHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch
Q 025211           29 DALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL  108 (256)
Q Consensus        29 ~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~  108 (256)
                      +.+++.+.   ..++..|||++||+|..+..+++.    .|++.|+|+|.++.|++.|++++...+....++++++.+..
T Consensus        13 ~evi~~l~---~~~~~~~lD~t~G~Gghs~~il~~----~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~   85 (192)
T d1m6ya2          13 REVIEFLK---PEDEKIILDCTVGEGGHSRAILEH----CPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD   85 (192)
T ss_dssp             HHHHHHHC---CCTTCEEEETTCTTSHHHHHHHHH----CTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred             HHHHHhhC---CCCCCEEEEecCCCcHHHHHHHhc----CCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHH
Confidence            34444443   368899999999999998877776    67889999999999999999998776656688888876542


Q ss_pred             ---hhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHH
Q 025211          109 ---EKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQ  185 (256)
Q Consensus       109 ---~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~  185 (256)
                         .....++||.|+.+..+.   .         ..+.....+.......+..+.++|+|||++++++........+.+.
T Consensus        86 ~~~~~~~~~~vdgIl~DlGvS---s---------~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s~Edr~vk~~  153 (192)
T d1m6ya2          86 FLLKTLGIEKVDGILMDLGVS---T---------YQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKET  153 (192)
T ss_dssp             HHHHHTTCSCEEEEEEECSCC---H---------HHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHcCCCCcceeeeccchh---H---------hhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccccHHHHHHHHH
Confidence               233357899999986652   1         1112233456678899999999999999999877433222233444


Q ss_pred             HHH
Q 025211          186 MME  188 (256)
Q Consensus       186 ~~~  188 (256)
                      +.+
T Consensus       154 f~~  156 (192)
T d1m6ya2         154 FRN  156 (192)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            443


No 64 
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.47  E-value=1.6e-13  Score=108.64  Aligned_cols=112  Identities=21%  Similarity=0.228  Sum_probs=87.7

Q ss_pred             HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcc
Q 025211           25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTD  103 (256)
Q Consensus        25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d  103 (256)
                      -.++..+++.+.   .+++.+|||+|||+|..+..++++++     ..|+++|.++..++.|++++...+..+ .++++|
T Consensus        64 P~~~a~ml~~L~---l~~g~~VLeIGsGsGY~taila~l~g-----~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd  135 (215)
T d1jg1a_          64 PHMVAIMLEIAN---LKPGMNILEVGTGSGWNAALISEIVK-----TDVYTIERIPELVEFAKRNLERAGVKNVHVILGD  135 (215)
T ss_dssp             HHHHHHHHHHHT---CCTTCCEEEECCTTSHHHHHHHHHHC-----SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             hhhHHHHHHhhc---cCccceEEEecCCCChhHHHHHHhhC-----ceeEEEeccHHHHHHHHHHHHHcCCceeEEEECc
Confidence            445566666654   36899999999999999998888753     479999999999999999999999876 999999


Q ss_pred             hhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          104 IASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       104 ~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ..+..+.  .+.||.|++......                           +-..+.+.|+|||++++..
T Consensus       136 ~~~g~~~--~~pfD~Iiv~~a~~~---------------------------ip~~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         136 GSKGFPP--KAPYDVIIVTAGAPK---------------------------IPEPLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             GGGCCGG--GCCEEEEEECSBBSS---------------------------CCHHHHHTEEEEEEEEEEE
T ss_pred             cccCCcc--cCcceeEEeeccccc---------------------------CCHHHHHhcCCCCEEEEEE
Confidence            9887554  478999999643211                           1222445799999999843


No 65 
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}
Probab=99.46  E-value=1e-13  Score=110.41  Aligned_cols=109  Identities=23%  Similarity=0.216  Sum_probs=80.7

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA  105 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~  105 (256)
                      .+...+++.+.   -+++.+|||+|||+|.++..++++.      .+|+++|+++++++.|++++... .+..++.+|..
T Consensus        57 ~~~a~ml~~L~---l~~g~~VLdIG~GsGy~ta~La~l~------~~V~aiE~~~~~~~~A~~~~~~~-~nv~~~~~d~~  126 (224)
T d1vbfa_          57 NLGIFMLDELD---LHKGQKVLEIGTGIGYYTALIAEIV------DKVVSVEINEKMYNYASKLLSYY-NNIKLILGDGT  126 (224)
T ss_dssp             HHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHS------SEEEEEESCHHHHHHHHHHHTTC-SSEEEEESCGG
T ss_pred             hhHHHHHHHhh---hcccceEEEecCCCCHHHHHHHHHh------cccccccccHHHHHHHHHHHhcc-cccccccCchh
Confidence            34445566554   2689999999999999998888762      48999999999999999886533 23389999987


Q ss_pred             hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ...++  .++||.|+++....                           .+...+.+.|||||++++..
T Consensus       127 ~g~~~--~~pfD~Iiv~~a~~---------------------------~ip~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         127 LGYEE--EKPYDRVVVWATAP---------------------------TLLCKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             GCCGG--GCCEEEEEESSBBS---------------------------SCCHHHHHTEEEEEEEEEEE
T ss_pred             hcchh--hhhHHHHHhhcchh---------------------------hhhHHHHHhcCCCCEEEEEE
Confidence            76544  47899999864321                           11233456799999999843


No 66 
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=4.9e-13  Score=112.03  Aligned_cols=118  Identities=18%  Similarity=0.204  Sum_probs=84.7

Q ss_pred             HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEc
Q 025211           25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINT  102 (256)
Q Consensus        25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~  102 (256)
                      ..+.+.|.....   ..++++|||+|||+|.+++.+++.    ++ .+|+|+|.++.+.. +++++..++...  .++++
T Consensus        21 ~~y~~ai~~~~~---~~~~~~VLDiGcG~G~lsl~aa~~----Ga-~~V~aid~s~~~~~-a~~~~~~~~~~~~i~~~~~   91 (311)
T d2fyta1          21 ESYRDFIYQNPH---IFKDKVVLDVGCGTGILSMFAAKA----GA-KKVLGVDQSEILYQ-AMDIIRLNKLEDTITLIKG   91 (311)
T ss_dssp             HHHHHHHHHCGG---GTTTCEEEEETCTTSHHHHHHHHT----TC-SEEEEEESSTHHHH-HHHHHHHTTCTTTEEEEES
T ss_pred             HHHHHHHHhccc---cCCcCEEEEECCCCCHHHHHHHHc----CC-CEEEEEeCHHHHHH-HHHHHHHhCCCccceEEEe
Confidence            344454544322   247899999999999998888775    33 38999999998764 566666666543  88999


Q ss_pred             chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          103 DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       103 d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      |+.+...  ...+||+|++.+..+.....                  .....++....++|||||+++.
T Consensus        92 ~~~~l~~--~~~~~D~Ivse~~~~~~~~e------------------~~~~~~~~a~~~~Lkp~G~iip  140 (311)
T d2fyta1          92 KIEEVHL--PVEKVDVIISEWMGYFLLFE------------------SMLDSVLYAKNKYLAKGGSVYP  140 (311)
T ss_dssp             CTTTSCC--SCSCEEEEEECCCBTTBTTT------------------CHHHHHHHHHHHHEEEEEEEES
T ss_pred             eHHHhcC--ccccceEEEEeeeeeecccc------------------cccHHHHHHHHhcCCCCcEEec
Confidence            9888633  35789999998765432221                  1366778888899999999873


No 67 
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.45  E-value=3e-13  Score=114.17  Aligned_cols=104  Identities=17%  Similarity=0.285  Sum_probs=80.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      .++++|||+|||+|.+++.+++.    +. ..|+|+|.++ +++.|++++..++...  .++++|+.+..  ..+.+||+
T Consensus        37 ~~~~~VLDlGcGtG~ls~~aa~~----Ga-~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~--~~~~~~D~  108 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGILSMFAAKH----GA-KHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH--LPFPKVDI  108 (328)
T ss_dssp             HTTCEEEEETCTTSHHHHHHHHT----CC-SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--CSSSCEEE
T ss_pred             CCcCEEEEeCCCCCHHHHHHHHh----CC-CEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc--CcccceeE
Confidence            37899999999999998877775    22 3899999997 6788999999888754  88999988763  33578999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY  170 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  170 (256)
                      |++.+........                  .....++....++|||||+++
T Consensus       109 i~se~~~~~~~~e------------------~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         109 IISEWMGYFLLYE------------------SMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EEECCCBTTBSTT------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEEecceeeccc------------------hhHHHHHHHHHhccCCCeEEE
Confidence            9997654322221                  125778888899999999986


No 68 
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44  E-value=3.2e-13  Score=110.53  Aligned_cols=135  Identities=14%  Similarity=0.084  Sum_probs=89.2

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-----------------------
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-----------------------   97 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-----------------------   97 (256)
                      ..+.+|||+|||+|.+++..+.    +.. .+|+|+|+++.|++.+++.+...+...                       
T Consensus        53 ~~g~~vLDiGcG~g~~~~~~~~----~~~-~~v~~~D~S~~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  127 (263)
T d2g72a1          53 VSGRTLIDIGSGPTVYQLLSAC----SHF-EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKE  127 (263)
T ss_dssp             SCCSEEEEETCTTCCGGGTTGG----GGC-SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHH
T ss_pred             CCCcEEEEeccCCCHHHHHHhc----ccC-CeEEEEeCCHHHHHHHHHHHhcCcccccchhhhhhhhhhccccchhhhhH
Confidence            4688999999999976422221    122 379999999999999998764322110                       


Q ss_pred             --------eEEEcchhhchh----hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc
Q 025211           98 --------DLINTDIASGLE----KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK  165 (256)
Q Consensus        98 --------~~~~~d~~~~~~----~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp  165 (256)
                              .+...|+.....    +..+++||+|++.....+.+                 .....+..+++++.++|||
T Consensus       128 ~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~fD~V~~~~~l~~i~-----------------~~~~~~~~~l~~~~~~LkP  190 (263)
T d2g72a1         128 RQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVS-----------------PDLASFQRALDHITTLLRP  190 (263)
T ss_dssp             HHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHC-----------------SSHHHHHHHHHHHHTTEEE
T ss_pred             HHhhhhhhccccccccCCCccccCCcCcCccCeeeeHHHHHHHc-----------------cCHHHHHHHHHHHHHHcCC
Confidence                    233445443221    12346799999954321111                 1123468899999999999


Q ss_pred             CeEEEEEEeC---------------CCCHHHHHHHHHHcCCcEEEEE
Q 025211          166 RGWLYLVTLT---------------ANDPSQICLQMMEKGYAARIVV  197 (256)
Q Consensus       166 gG~l~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~  197 (256)
                      ||.+++...-               .-..+++.+.+.+.||+.+...
T Consensus       191 GG~li~~~~~~~~~~~~~~~~~~~~~~t~e~v~~~l~~aGf~v~~~~  237 (263)
T d2g72a1         191 GGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR  237 (263)
T ss_dssp             EEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred             CCEEEEecccCCcccccCCcccccCCCCHHHHHHHHHHCCCeEEEEE
Confidence            9999985531               1256899999999999875543


No 69 
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.44  E-value=2.3e-13  Score=114.29  Aligned_cols=104  Identities=15%  Similarity=0.225  Sum_probs=80.6

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      .++++|||+|||+|.+++.+++.    ++ ..|+|+|.++. ...+++++..+++..  .++++|+.+..  ...++||+
T Consensus        32 ~~~~~VLDiGcG~G~ls~~aa~~----Ga-~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~--~~~~~~D~  103 (316)
T d1oria_          32 FKDKVVLDVGSGTGILCMFAAKA----GA-RKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE--LPVEKVDI  103 (316)
T ss_dssp             HTTCEEEEETCTTSHHHHHHHHT----TC-SEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSSCEEE
T ss_pred             CCcCEEEEEecCCcHHHHHHHHh----CC-CEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc--cccceeEE
Confidence            37899999999999998888775    32 37999999975 577788888888764  88899988863  23578999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY  170 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  170 (256)
                      |++....+.....                  ..+..++..+.++|||||+++
T Consensus       104 ivs~~~~~~l~~e------------------~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         104 IISEWMGYCLFYE------------------SMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             EEECCCBBTBTBT------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred             EeeeeeeeeeccH------------------HHHHHHHHHHHhcCCCCeEEE
Confidence            9997654322211                  126788999999999999987


No 70 
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.44  E-value=9.1e-12  Score=102.70  Aligned_cols=161  Identities=17%  Similarity=0.105  Sum_probs=109.9

Q ss_pred             CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211           16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV   95 (256)
Q Consensus        16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~   95 (256)
                      +.+...+.+..++..++.      ..++.+|||+|+|.|.-+..++..    ..+..|+++|+++..++.+++++.+.|.
T Consensus        82 G~~~vQD~sS~l~~~~L~------~~~g~~vLD~CAaPGgKt~~la~l----~~~~~i~a~d~~~~R~~~l~~~~~r~g~  151 (284)
T d1sqga2          82 GWVTVQDASAQGCMTWLA------PQNGEHILDLCAAPGGKTTHILEV----APEAQVVAVDIDEQRLSRVYDNLKRLGM  151 (284)
T ss_dssp             TSEEECCHHHHTHHHHHC------CCTTCEEEEESCTTCHHHHHHHHH----CTTCEEEEEESSTTTHHHHHHHHHHTTC
T ss_pred             cEEEeccccccccccccC------ccccceeEeccCccccchhhhhhh----hhhhhhhhhhcchhhhhhHhhhhhcccc
Confidence            334444445555554443      268899999999999999988876    3456899999999999999999999998


Q ss_pred             cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCc----HHHHHHHHHHHhhccccCeEEEE
Q 025211           96 HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENG----RAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus        96 ~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      .+.....+..........+.||.|++++|-....   ..++.+...|.-....    ......+|..+.++|||||+++.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~fd~IL~DaPCSg~G---~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvY  228 (284)
T d1sqga2         152 KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATG---VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY  228 (284)
T ss_dssp             CCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGG---GTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred             cceeeeccccccchhcccccccEEEEeccccccC---ccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            8744443333222223357899999999975432   2233343333222221    22566888999999999999999


Q ss_pred             EEeCCCCH---HHHHHHHHHc
Q 025211          172 VTLTANDP---SQICLQMMEK  189 (256)
Q Consensus       172 ~~~~~~~~---~~~~~~~~~~  189 (256)
                      ++++....   ..+...++++
T Consensus       229 sTCS~~~~ENE~vv~~~l~~~  249 (284)
T d1sqga2         229 ATCSVLPEENSLQIKAFLQRT  249 (284)
T ss_dssp             EESCCCGGGTHHHHHHHHHHC
T ss_pred             eeecCchhhCHHHHHHHHHhC
Confidence            99877533   3455555553


No 71 
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.41  E-value=3.1e-13  Score=107.69  Aligned_cols=116  Identities=14%  Similarity=0.163  Sum_probs=85.0

Q ss_pred             HHHHHHHhhc-ccccCCCCEEEEecccccHHHHHHHHHhcccC--CCceEEEEeCCHHHHHHHHHHHHHcC-----Ccc-
Q 025211           27 LVDALLADRI-NLVEHHPVLCMEVGCGSGYVITSLALMLGQEV--PGVQYIATDINPYAVEVTRKTLEAHN-----VHA-   97 (256)
Q Consensus        27 l~~~l~~~~~-~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~--~~~~v~giD~~~~~i~~a~~~~~~~~-----~~~-   97 (256)
                      +...+++.+. .+  +++.+|||+|||+|..+..++++++..+  ++.+|+++|+++++++.|++|+....     ..+ 
T Consensus        66 ~~a~~l~~L~~~l--~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv  143 (223)
T d1r18a_          66 MHAFALEYLRDHL--KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL  143 (223)
T ss_dssp             HHHHHHHHTTTTC--CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred             hHHHHHHHHhhcc--CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEE
Confidence            4455666542 22  5889999999999999999998876432  34589999999999999999876543     223 


Q ss_pred             eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211           98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus        98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .+..+|..+..++  .+.||.|+++....                           .+-..+.+.|||||++++..
T Consensus       144 ~~~~~d~~~~~~~--~~~fD~Iiv~~a~~---------------------------~~p~~l~~~Lk~gG~lV~pv  190 (223)
T d1r18a_         144 LIVEGDGRKGYPP--NAPYNAIHVGAAAP---------------------------DTPTELINQLASGGRLIVPV  190 (223)
T ss_dssp             EEEESCGGGCCGG--GCSEEEEEECSCBS---------------------------SCCHHHHHTEEEEEEEEEEE
T ss_pred             EEEeccccccccc--ccceeeEEEEeech---------------------------hchHHHHHhcCCCcEEEEEE
Confidence            8889998876544  47899999965421                           11233467899999998743


No 72 
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}
Probab=99.40  E-value=2.5e-12  Score=100.93  Aligned_cols=127  Identities=15%  Similarity=0.205  Sum_probs=100.7

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEc
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINT  102 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~  102 (256)
                      .+.+..++++.+..++--++.+|+|+|||.|..++.+|..    +|+.+++.+|.+..-+...++-+...++++ ++++.
T Consensus        47 ~~~~~rHi~DSl~~~~~~~~~~ilDiGsGaG~PGi~laI~----~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~  122 (207)
T d1jsxa_          47 NEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIV----RPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQS  122 (207)
T ss_dssp             -CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHH----CTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred             HHHHHHHhcchHhhhhhhcCCceeeeeccCCceeeehhhh----cccceEEEEecchHHHHHHHHHHHHcCCcceeeecc
Confidence            4556667777765444446789999999999999999987    899999999999999999999999999876 89999


Q ss_pred             chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHH
Q 025211          103 DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQI  182 (256)
Q Consensus       103 d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~  182 (256)
                      ++.+...   ..+||+|++-                  ++       ..+..+++-+..+++++|++++. .+....+++
T Consensus       123 R~E~~~~---~~~fD~V~sR------------------A~-------~~~~~ll~~~~~~l~~~g~~~~~-KG~~~~eEl  173 (207)
T d1jsxa_         123 RVEEFPS---EPPFDGVISR------------------AF-------ASLNDMVSWCHHLPGEQGRFYAL-KGQMPEDEI  173 (207)
T ss_dssp             CTTTSCC---CSCEEEEECS------------------CS-------SSHHHHHHHHTTSEEEEEEEEEE-ESSCCHHHH
T ss_pred             chhhhcc---ccccceehhh------------------hh-------cCHHHHHHHHHHhcCCCcEEEEE-CCCCHHHHH
Confidence            9887643   3589999882                  11       12678999999999999999984 445555554


Q ss_pred             H
Q 025211          183 C  183 (256)
Q Consensus       183 ~  183 (256)
                      .
T Consensus       174 ~  174 (207)
T d1jsxa_         174 A  174 (207)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 73 
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39  E-value=2.5e-12  Score=108.36  Aligned_cols=120  Identities=16%  Similarity=0.126  Sum_probs=85.8

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-------CC-
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-------NV-   95 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-------~~-   95 (256)
                      ...+++.+++.+.   .+++.+|||+|||+|.+++.+++.    .+...++|+|+++.+++.|+++....       |. 
T Consensus       136 ~~~~~~~~~~~~~---l~~~~~vlD~GcG~G~~~~~~a~~----~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~  208 (328)
T d1nw3a_         136 SFDLVAQMIDEIK---MTDDDLFVDLGSGVGQVVLQVAAA----TNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK  208 (328)
T ss_dssp             CHHHHHHHHHHSC---CCTTCEEEEETCTTSHHHHHHHHH----CCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHcC---CCCCCEEEEcCCCCCHHHHHHHHH----hCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhcccc
Confidence            3445556666543   368899999999999999988877    55568999999999999998876542       22 


Q ss_pred             --cceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211           96 --HADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus        96 --~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                        +.+++++|+.+......-...|+|++|--.+ .                     ..+...+.++.+.|||||+++..
T Consensus       209 ~~~i~~~~gd~~~~~~~~~~~~advi~~~~~~f-~---------------------~~~~~~l~e~~r~LKpGg~iv~~  265 (328)
T d1nw3a_         209 HAEYTLERGDFLSEEWRERIANTSVIFVNNFAF-G---------------------PEVDHQLKERFANMKEGGRIVSS  265 (328)
T ss_dssp             CCCEEEEECCTTSHHHHHHHHHCSEEEECCTTT-C---------------------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred             CCceEEEECcccccccccccCcceEEEEcceec-c---------------------hHHHHHHHHHHHhCCCCcEEEEe
Confidence              2389999998753211001358888863221 1                     12567789999999999999874


No 74 
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.38  E-value=4.5e-12  Score=100.31  Aligned_cols=123  Identities=19%  Similarity=0.284  Sum_probs=89.3

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhh----cCCC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKR----LAGL  115 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~----~~~~  115 (256)
                      ++++|||+|||+|..++.+++.+.   ++++|+++|+++++++.|++++...|+..  +++.+|..+.++.+    ..+.
T Consensus        56 kpk~ILEiGt~~G~Sti~la~al~---~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          56 SPSLVLELGAYCGYSAVRMARLLQ---PGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT  132 (214)
T ss_dssp             CCSEEEEECCTTSHHHHHHHTTCC---TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCC
T ss_pred             CCCEEEEEccCchhHHHHHHHhCC---CccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccc
Confidence            678999999999999998887653   46799999999999999999999999865  89999998876543    2367


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHc
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEK  189 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~  189 (256)
                      ||+|+.+.-                      +........+..+.++|+|||++++-..-.....+..+.+++.
T Consensus       133 ~D~ifiD~~----------------------~~~~~~~~~l~~~~~lLkpGGvIv~Ddvl~~g~~~~~~~vr~~  184 (214)
T d2cl5a1         133 LDMVFLDHW----------------------KDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGS  184 (214)
T ss_dssp             EEEEEECSC----------------------GGGHHHHHHHHHHTTCEEEEEEEEESCCCCCCCHHHHHHHHHC
T ss_pred             cceeeeccc----------------------ccccccHHHHHHHhCccCCCcEEEEeCcCCCCChHHHHHHhcc
Confidence            999998621                      1111123346677889999998776111122223445555544


No 75 
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36  E-value=5.4e-12  Score=100.06  Aligned_cols=104  Identities=21%  Similarity=0.241  Sum_probs=86.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhh----cCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKR----LAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~----~~~  114 (256)
                      ...++|||+|||+|..++++++.+.   ++++++++|.+++..+.|++++...++..  +++.+|+.+.++..    ..+
T Consensus        58 ~~~k~vLEiGt~~GyStl~~a~al~---~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~  134 (219)
T d2avda1          58 IQAKKALDLGTFTGYSALALALALP---ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAG  134 (219)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTSC---TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred             cCCCeEEEEechhhHHHHHHHHhCC---CCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccC
Confidence            3679999999999999999988763   36799999999999999999999998765  89999988876543    257


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      +||+|+.+--.                        ..+...++.+.++|+|||.+++
T Consensus       135 ~fD~ifiD~dk------------------------~~y~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         135 TFDVAVVDADK------------------------ENCSAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             CEEEEEECSCS------------------------TTHHHHHHHHHHHEEEEEEEEE
T ss_pred             CccEEEEeCCH------------------------HHHHHHHHHHHHHhcCCcEEEE
Confidence            89999996211                        1256778889999999999998


No 76 
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.34  E-value=7.5e-12  Score=99.67  Aligned_cols=103  Identities=19%  Similarity=0.195  Sum_probs=87.3

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhh-----cCC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKR-----LAG  114 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~-----~~~  114 (256)
                      .+++|||+|+++|.-++.+++.+.   ++++++.+|.+++..+.|++++...|+..  +++.+++.+.++..     ..+
T Consensus        59 ~~k~iLEiGT~~GyStl~la~al~---~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~  135 (227)
T d1susa1          59 NAKNTMEIGVYTGYSLLATALAIP---EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  135 (227)
T ss_dssp             TCCEEEEECCGGGHHHHHHHHHSC---TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTT
T ss_pred             CCCcEEEecchhhhhHHHHHhhCC---CCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCC
Confidence            679999999999999999998864   35799999999999999999999999865  89999998887654     246


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      +||+|+.+--                      +  ..+...++.+.++|+|||.+++
T Consensus       136 ~fD~iFiDa~----------------------k--~~y~~~~e~~~~ll~~gGiii~  168 (227)
T d1susa1         136 SYDFIFVDAD----------------------K--DNYLNYHKRLIDLVKVGGVIGY  168 (227)
T ss_dssp             CBSEEEECSC----------------------S--TTHHHHHHHHHHHBCTTCCEEE
T ss_pred             ceeEEEeccc----------------------h--hhhHHHHHHHHhhcCCCcEEEE
Confidence            8999999621                      1  1167888999999999999998


No 77 
>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.33  E-value=7.5e-11  Score=98.35  Aligned_cols=163  Identities=13%  Similarity=0.090  Sum_probs=110.7

Q ss_pred             CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211           16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV   95 (256)
Q Consensus        16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~   95 (256)
                      +.+...+.+..++..++.      ..++.+|||+|+|.|.-+..++..+.   .++.+++.|+++..++.+++++.+.+.
T Consensus        96 G~~~vQD~aS~l~~~~l~------~~~g~~vlD~CAapGgKt~~l~~~~~---~~~~i~a~d~~~~r~~~l~~~~~r~~~  166 (313)
T d1ixka_          96 GLIYIQEASSMYPPVALD------PKPGEIVADMAAAPGGKTSYLAQLMR---NDGVIYAFDVDENRLRETRLNLSRLGV  166 (313)
T ss_dssp             TSEEECCHHHHHHHHHHC------CCTTCEEEECCSSCSHHHHHHHHHTT---TCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred             ceEEEecccccchhhccc------CCccceeeecccchhhhhHhhhhhcc---cccceeeeccCHHHHHHHHHHHHHHHh
Confidence            344444445555555543      26889999999999999888888754   356899999999999999999999988


Q ss_pred             cc-eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCC----cHHHHHHHHHHHhhccccCeEEE
Q 025211           96 HA-DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGEN----GRAVIDKILPSADKLLSKRGWLY  170 (256)
Q Consensus        96 ~~-~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~LkpgG~l~  170 (256)
                      .+ .+...|....  +.....||.|++++|-.....-   ++.+...|.-...    -.....+++..+..+|||||+++
T Consensus       167 ~~i~~~~~d~~~~--~~~~~~fD~ILvDaPCSg~G~~---~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lV  241 (313)
T d1ixka_         167 LNVILFHSSSLHI--GELNVEFDKILLDAPCTGSGTI---HKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILV  241 (313)
T ss_dssp             CSEEEESSCGGGG--GGGCCCEEEEEEECCTTSTTTC---C--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             hcccccccccccc--ccccccccEEEEccccccCCce---eeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEE
Confidence            76 5566665554  2235789999999997644332   2222222211111    11256678899999999999999


Q ss_pred             EEEeCCCC---HHHHHHHHHHcCCc
Q 025211          171 LVTLTAND---PSQICLQMMEKGYA  192 (256)
Q Consensus       171 ~~~~~~~~---~~~~~~~~~~~g~~  192 (256)
                      .++++...   ...+...+++.+++
T Consensus       242 YsTCSl~~eENE~VV~~~L~~~~~~  266 (313)
T d1ixka_         242 YSTCSLEPEENEFVIQWALDNFDVE  266 (313)
T ss_dssp             EEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred             EeeccCChHhHHHHHHHHHhcCCCE
Confidence            99987653   33455555655543


No 78 
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.31  E-value=1.4e-12  Score=112.21  Aligned_cols=118  Identities=14%  Similarity=0.129  Sum_probs=80.4

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-------Ccc-
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-------VHA-   97 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-------~~~-   97 (256)
                      -++..+++.+.   -+++.+|||+|||+|.+++.+|..    .+...++|+|+++.+++.|+++....+       ... 
T Consensus       203 ~~i~~Il~~l~---Lkpgd~fLDLGCG~G~~vl~aA~~----~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~  275 (406)
T d1u2za_         203 NFLSDVYQQCQ---LKKGDTFMDLGSGVGNCVVQAALE----CGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLN  275 (406)
T ss_dssp             HHHHHHHHHTT---CCTTCEEEEESCTTSHHHHHHHHH----HCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred             HHHHHHHHHhC---CCCCCEEEeCCCCCcHHHHHHHHH----cCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccc
Confidence            34455555543   378999999999999999988887    444589999999999999999887542       111 


Q ss_pred             --eE-EEcchhhchh-hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211           98 --DL-INTDIASGLE-KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus        98 --~~-~~~d~~~~~~-~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                        .+ ..+++..... ...-..+|+|++|--.+ .                     ..+...+.++.+.|||||+++..
T Consensus       276 ~~~~~~~~~f~~~~~~d~~~~~adVV~inn~~f-~---------------------~~l~~~L~ei~r~LKPGGrIVs~  332 (406)
T d1u2za_         276 NVEFSLKKSFVDNNRVAELIPQCDVILVNNFLF-D---------------------EDLNKKVEKILQTAKVGCKIISL  332 (406)
T ss_dssp             CEEEEESSCSTTCHHHHHHGGGCSEEEECCTTC-C---------------------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred             cceeeeeechhhccccccccccceEEEEecccC-c---------------------hHHHHHHHHHHHhcCCCcEEEEe
Confidence              11 2333332211 11124678998863111 1                     12678899999999999999874


No 79 
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}
Probab=99.23  E-value=4.9e-10  Score=89.29  Aligned_cols=146  Identities=12%  Similarity=0.119  Sum_probs=109.5

Q ss_pred             CchHHHHHHHHHhhcccc---cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-
Q 025211           22 DDSFALVDALLADRINLV---EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-   97 (256)
Q Consensus        22 ~~~~~l~~~l~~~~~~~~---~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-   97 (256)
                      ...+.+..++++.+..+.   .....+|+|+|+|.|..++.++..    .|+.+++.+|.+..-+...+..+...++++ 
T Consensus        47 ~~~~i~~rHi~DSl~~~~~~~~~~~~~ilDiGSGaGfPGi~laI~----~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~  122 (239)
T d1xdza_          47 EKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKIC----FPHLHVTIVDSLNKRITFLEKLSEALQLENT  122 (239)
T ss_dssp             SHHHHHHHTHHHHHGGGGTSCGGGCCEEEEECSSSCTTHHHHHHH----CTTCEEEEEESCHHHHHHHHHHHHHHTCSSE
T ss_pred             CHHHHHHHhccchhhhhhhhcccCCCeEEeecCCCchHHHHHHHh----CCCccceeecchHHHHHHHHHHHHHhCCCCc
Confidence            335666777777764332   135689999999999999999988    788999999999999999999999999987 


Q ss_pred             eEEEcchhhchhh-hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211           98 DLINTDIASGLEK-RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA  176 (256)
Q Consensus        98 ~~~~~d~~~~~~~-~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  176 (256)
                      .+++.++.+.... ...++||+|++-                  ++       ..+..+++-+..++++||++++. .+.
T Consensus       123 ~i~~~R~E~~~~~~~~~~~~D~v~sR------------------Av-------a~l~~ll~~~~~~l~~~g~~i~~-KG~  176 (239)
T d1xdza_         123 TFCHDRAETFGQRKDVRESYDIVTAR------------------AV-------ARLSVLSELCLPLVKKNGLFVAL-KAA  176 (239)
T ss_dssp             EEEESCHHHHTTCTTTTTCEEEEEEE------------------CC-------SCHHHHHHHHGGGEEEEEEEEEE-ECC
T ss_pred             EEEeehhhhccccccccccceEEEEh------------------hh-------hCHHHHHHHHhhhcccCCEEEEE-CCC
Confidence            8888888776432 124689999982                  11       12788999999999999999884 445


Q ss_pred             CCHHHH---HHHHHHcCCcEEEEE
Q 025211          177 NDPSQI---CLQMMEKGYAARIVV  197 (256)
Q Consensus       177 ~~~~~~---~~~~~~~g~~~~~~~  197 (256)
                      ...+++   .+.+...++....+.
T Consensus       177 ~~~~El~~a~~~~~~~~~~~~~v~  200 (239)
T d1xdza_         177 SAEEELNAGKKAITTLGGELENIH  200 (239)
T ss_dssp             -CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred             ChHHHHHHHHHHHHHcCCEEEEEE
Confidence            555544   445566677765443


No 80 
>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21  E-value=2.2e-10  Score=94.68  Aligned_cols=149  Identities=14%  Similarity=0.063  Sum_probs=99.7

Q ss_pred             CccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211           16 EVYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV   95 (256)
Q Consensus        16 ~~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~   95 (256)
                      +.+...+.+..++..++..      .++.+|||+|+|.|.-+..++..+.   .+..|+++|+++..++.+++++.+.|+
T Consensus        74 G~~~~QD~sS~l~~~~L~~------~~g~~vLD~cAapGgKt~~la~l~~---~~~~i~a~d~~~~R~~~l~~~l~r~g~  144 (293)
T d2b9ea1          74 GHLILQDRASCLPAMLLDP------PPGSHVIDACAAPGNKTSHLAALLK---NQGKIFAFDLDAKRLASMATLLARAGV  144 (293)
T ss_dssp             TSEEECCTGGGHHHHHHCC------CTTCEEEESSCTTCHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred             cEEEEcCCcccccccccCC------CccceEEecccchhhHHHHHHHHhc---CCceEeeecCCHHHHHHHHHHHHhcCc
Confidence            3444555555555555442      5889999999999999998888764   356899999999999999999999998


Q ss_pred             cc-eEEEcchhhchhhh-cCCCccEEEECCCCCCCCCcccccccchhhhc--CCCCc----HHHHHHHHHHHhhccccCe
Q 025211           96 HA-DLINTDIASGLEKR-LAGLVDVMVVNPPYVPTPEDEVGREGIASAWA--GGENG----RAVIDKILPSADKLLSKRG  167 (256)
Q Consensus        96 ~~-~~~~~d~~~~~~~~-~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~l~~~~~~LkpgG  167 (256)
                      .+ .+...|........ ..++||.|++++|-.....   .++.+...|.  .....    ......++..+. .|++||
T Consensus       145 ~~~~~~~~d~~~~~~~~~~~~~fD~VL~DaPCSg~G~---~~r~p~~~~~~~~~~~~~~~l~~~Q~~il~~a~-~l~~gG  220 (293)
T d2b9ea1         145 SCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGM---PSRQLEEPGAGTPSPVRLHALAGFQQRALCHAL-TFPSLQ  220 (293)
T ss_dssp             CSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC---------------------CCHHHHHHHHHHHHHHHT-TCTTCC
T ss_pred             cceeeeehhhhhhcccccccceeeEEeecCcccchhh---hcccchhhccCCcchhhHHHHhhhhHHhHHHhh-hccccc
Confidence            87 88888887654321 2367999999999654332   1122222221  11111    113445666666 479999


Q ss_pred             EEEEEEeCCC
Q 025211          168 WLYLVTLTAN  177 (256)
Q Consensus       168 ~l~~~~~~~~  177 (256)
                      +++.++++..
T Consensus       221 ~lvYsTCSl~  230 (293)
T d2b9ea1         221 RLVYSTCSLC  230 (293)
T ss_dssp             EEEEEESCCC
T ss_pred             EEEEeeccCC
Confidence            9999998765


No 81 
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=99.18  E-value=3.1e-10  Score=91.26  Aligned_cols=134  Identities=19%  Similarity=0.242  Sum_probs=96.3

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC--cceEEEcchhhchhhhcCCCccEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV--HADLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      ...+|||+|||+|.+++.+++.    +|+.+++..|+ |..++.       .+.  ..+++.+|+.+..+     ..|++
T Consensus        81 ~~~~vlDiGGG~G~~~~~l~~~----~P~l~~~v~Dl-p~vi~~-------~~~~~ri~~~~gd~~~~~p-----~~D~~  143 (244)
T d1fp1d2          81 GISTLVDVGGGSGRNLELIISK----YPLIKGINFDL-PQVIEN-------APPLSGIEHVGGDMFASVP-----QGDAM  143 (244)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTT-------CCCCTTEEEEECCTTTCCC-----CEEEE
T ss_pred             CCcEEEEecCCCcHHHHHHHHH----CCCCeEEEecc-hhhhhc-------cCCCCCeEEecCCcccccc-----cceEE
Confidence            4589999999999998888887    99999999998 444432       222  23888999876532     34999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-----------------------
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-----------------------  176 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------  176 (256)
                      ++.-..+..+++                   ....+|+.+++.|+|||+++++....                       
T Consensus       144 ~l~~vLh~~~de-------------------~~~~iL~~~~~aL~pgg~llI~e~v~~~~~~~~~~~~~~~~~d~~m~~~  204 (244)
T d1fp1d2         144 ILKAVCHNWSDE-------------------KCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFIT  204 (244)
T ss_dssp             EEESSGGGSCHH-------------------HHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHH
T ss_pred             EEehhhhhCCHH-------------------HHHHHHHHHHHHcCCCcEEEEEEEEecCCCCCchHHHHHHHHHHHHHhh
Confidence            986554443332                   25688999999999999999976311                       


Q ss_pred             -----CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEEEe
Q 025211          177 -----NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKFWR  213 (256)
Q Consensus       177 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~  213 (256)
                           +..++..+++++.||+...+.....  ..+.+++++|
T Consensus       205 ~~g~ert~~e~~~ll~~AGF~~v~v~~~~~--~~~~viE~~K  244 (244)
T d1fp1d2         205 VGGRERTEKQYEKLSKLSGFSKFQVACRAF--NSLGVMEFYK  244 (244)
T ss_dssp             HSCCCEEHHHHHHHHHHTTCSEEEEEEEET--TTEEEEEEEC
T ss_pred             CCCcCCCHHHHHHHHHHcCCCceEEEecCC--CCEEEEEEeC
Confidence                 0245778899999999877664322  2446777765


No 82 
>d1o9ga_ c.66.1.29 (A:) rRNA methyltransferase AviRa {Streptomyces viridochromogenes [TaxId: 1938]}
Probab=99.13  E-value=1.3e-10  Score=93.19  Aligned_cols=145  Identities=19%  Similarity=0.225  Sum_probs=93.7

Q ss_pred             cCCccccCCchHHHHHHHHHhhcccc-cCCCCEEEEecccccHHHHHHHHHhcccC------------------------
Q 025211           14 HPEVYEPCDDSFALVDALLADRINLV-EHHPVLCMEVGCGSGYVITSLALMLGQEV------------------------   68 (256)
Q Consensus        14 ~~~~~~p~~~~~~l~~~l~~~~~~~~-~~~~~~VLDlGcG~G~~~~~l~~~l~~~~------------------------   68 (256)
                      |..-+.|..... ++..++.....+. -..+..++|++||+|++.++++.+....-                        
T Consensus        22 ~~~~~~~~~~~~-Laa~il~~al~l~~w~~~~~LlDPmCGSGTilIEAAlia~niaPGl~R~f~fe~w~~~~~~~w~~l~  100 (249)
T d1o9ga_          22 HSAPGYPAFPVR-LATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLS  100 (249)
T ss_dssp             CCBTTBCCCCHH-HHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTS
T ss_pred             ccCCCCCCcchH-HHHHHHHHHhhhhcCCCCCceeccccCccHHHHHHHHHHhCcCcCcccchhhhcccccCHHHHHHHH
Confidence            344455655544 4444333322111 23557899999999999999998643221                        


Q ss_pred             ------------CCceEEEEeCCHHHHHHH---HHHHHHcCCcc--eEEEcchhhchhh--h-cCCCccEEEECCCCCCC
Q 025211           69 ------------PGVQYIATDINPYAVEVT---RKTLEAHNVHA--DLINTDIASGLEK--R-LAGLVDVMVVNPPYVPT  128 (256)
Q Consensus        69 ------------~~~~v~giD~~~~~i~~a---~~~~~~~~~~~--~~~~~d~~~~~~~--~-~~~~fD~Ii~npP~~~~  128 (256)
                                  ....++|.|+++.+++.|   ++|+...++..  .+.+.|+++..+.  . .....++||+||||...
T Consensus       101 ~~a~~~~~~~~~~~~~i~G~D~d~~ai~~A~~~r~n~~~Agl~~~i~i~~~d~f~~~~~~~~~~~~~~GlIVtNPPYGER  180 (249)
T d1o9ga_         101 PAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGER  180 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGS
T ss_pred             HHHHHHHhccccccCCccccccCHHHHHHHHHHHHHHHHcCCCceeeeeecchhccCcchhccCCCCCCEEEeCCCcccc
Confidence                        113578999999999988   46888888765  7888888765431  1 24568999999999754


Q ss_pred             CCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          129 PEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      -..+            +......+..+...+.+.|.....+++
T Consensus       181 l~~~------------~~~~~~~~~~~~~~l~~~~p~~s~~~i  211 (249)
T d1o9ga_         181 THWE------------GQVPGQPVAGLLRSLASALPAHAVIAV  211 (249)
T ss_dssp             SSSS------------SCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             cccc------------ccchHHHHHHHHHHHHccCCCCcEEEE
Confidence            4321            111234467778888888855555555


No 83 
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}
Probab=99.12  E-value=2.3e-10  Score=95.14  Aligned_cols=112  Identities=18%  Similarity=0.176  Sum_probs=82.1

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc--C----CcceEEEcchhhchhhhcCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH--N----VHADLINTDIASGLEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~--~----~~~~~~~~d~~~~~~~~~~~  114 (256)
                      ..+++||.+|.|.|..+.++++.    .+..+|+++|++++.++.|++.+...  +    ...+++.+|+.+.+.. .+.
T Consensus        76 ~~pk~VLiiG~G~G~~~~~ll~~----~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~  150 (312)
T d1uira_          76 PEPKRVLIVGGGEGATLREVLKH----PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEE  150 (312)
T ss_dssp             SCCCEEEEEECTTSHHHHHHTTS----TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCC
T ss_pred             CCcceEEEeCCCchHHHHHHHhc----CCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhh-cCC
Confidence            46799999999999975444332    56679999999999999999987542  1    1238999999998765 357


Q ss_pred             CccEEEECCC--CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          115 LVDVMVVNPP--YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       115 ~fD~Ii~npP--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      +||+|+++.+  +......        ..+        ...++++.+.+.|+|||++++-.
T Consensus       151 ~yDvIi~D~~dp~~~~~~~--------~~L--------~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         151 RYDVVIIDLTDPVGEDNPA--------RLL--------YTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             CEEEEEEECCCCBSTTCGG--------GGG--------SSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cccEEEEeCCCcccccchh--------hhh--------hhHHHHHHHHHhcCCCceEEEec
Confidence            8999998753  3221111        001        13578999999999999998754


No 84 
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.06  E-value=5.6e-10  Score=86.62  Aligned_cols=111  Identities=16%  Similarity=0.190  Sum_probs=70.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcc----cCCCceEEEEeCCHHHHHHHHHHHH--------------Hc----CCc--
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQ----EVPGVQYIATDINPYAVEVTRKTLE--------------AH----NVH--   96 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~----~~~~~~v~giD~~~~~i~~a~~~~~--------------~~----~~~--   96 (256)
                      .+..+|+++|||||.-+..++..+.+    .....+|+|+|+++.+++.|++...              ..    +..  
T Consensus        23 ~~~lrIwsaGCstGeE~YSlA~~l~e~~~~~~~~~~I~atDi~~~~l~~A~~g~y~~~~~~~~~~~~~~~yf~~~~~~~~  102 (193)
T d1af7a2          23 HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE  102 (193)
T ss_dssp             CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred             CCCeEEEEeCCCCchhHHHHHHHHHHhhhhcCCceEEEeecCChHHhhHhhcCcccHHHHhhhhHHHHhhceeecCCCcc
Confidence            46789999999999866656554432    2235689999999999999975321              10    000  


Q ss_pred             c------------eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc
Q 025211           97 A------------DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS  164 (256)
Q Consensus        97 ~------------~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk  164 (256)
                      .            .+...+..... ....+.||+|+|--.+...+                   ......+++.+++.|+
T Consensus       103 ~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~fDvI~CRNVLiYf~-------------------~~~~~~vl~~l~~~L~  162 (193)
T d1af7a2         103 GLVRVRQELANYVEFSSVNLLEKQ-YNVPGPFDAIFCRNVMIYFD-------------------KTTQEDILRRFVPLLK  162 (193)
T ss_dssp             SEEEECHHHHTTEEEEECCTTCSS-CCCCCCEEEEEECSSGGGSC-------------------HHHHHHHHHHHGGGEE
T ss_pred             ceeehHHHHHHHHHHhhhhccccc-cCCCCCccEEEeehhHHhcC-------------------HHHHHHHHHHHHHHhC
Confidence            0            12222222221 11247899999943332221                   1236789999999999


Q ss_pred             cCeEEEE
Q 025211          165 KRGWLYL  171 (256)
Q Consensus       165 pgG~l~~  171 (256)
                      |||.+++
T Consensus       163 pGG~L~l  169 (193)
T d1af7a2         163 PDGLLFA  169 (193)
T ss_dssp             EEEEEEE
T ss_pred             CCcEEEE
Confidence            9999887


No 85 
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}
Probab=99.05  E-value=1.1e-09  Score=90.18  Aligned_cols=114  Identities=15%  Similarity=0.218  Sum_probs=81.6

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC--C---cceEEEcchhhchhhhcCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN--V---HADLINTDIASGLEKRLAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~--~---~~~~~~~d~~~~~~~~~~~~  115 (256)
                      ..+++||-+|.|.|..+.++++.    .+..+|+++|+++++++.|++.+..+.  .   ..+++.+|+...+.. .+++
T Consensus        88 ~~pk~VLiiGgG~G~~~r~~l~~----~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~  162 (295)
T d1inla_          88 PNPKKVLIIGGGDGGTLREVLKH----DSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-FKNE  162 (295)
T ss_dssp             SSCCEEEEEECTTCHHHHHHTTS----TTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-CSSC
T ss_pred             CCCceEEEecCCchHHHHHHHhc----CCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhc-CCCC
Confidence            46799999999999975444432    455689999999999999999776532  2   238999999998765 3578


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                      ||+|+++.+-......        ..+        ....+++.+.+.|+|||++++-..+
T Consensus       163 yDvIi~D~~dp~~~~~--------~~L--------~t~efy~~~~~~L~~~Gi~v~q~~s  206 (295)
T d1inla_         163 FDVIIIDSTDPTAGQG--------GHL--------FTEEFYQACYDALKEDGVFSAETED  206 (295)
T ss_dssp             EEEEEEEC------------------C--------CSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred             CCEEEEcCCCCCcCch--------hhh--------ccHHHHHHHHhhcCCCcEEEEecCC
Confidence            9999998642111000        001        1368899999999999999985543


No 86 
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.02  E-value=2.3e-09  Score=88.11  Aligned_cols=132  Identities=17%  Similarity=0.145  Sum_probs=90.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-----CcceEEEcchhhchhhhcCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-----VHADLINTDIASGLEKRLAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~  115 (256)
                      ..+++||=+|-|.|..+.++.+.    .+-..++++|++++.++.+++.+..+.     ...+++.+|....+....+++
T Consensus        79 ~~pk~VLiiGgG~G~~~r~~l~~----~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~  154 (290)
T d1xj5a_          79 PNPKKVLVIGGGDGGVLREVARH----ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS  154 (290)
T ss_dssp             SCCCEEEEETCSSSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred             CCCcceEEecCCchHHHHHHHhc----ccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccC
Confidence            46789999999999975444332    454589999999999999999765432     223899999998876544568


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-CHH---HHHHHHHHcCC
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-DPS---QICLQMMEKGY  191 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~---~~~~~~~~~g~  191 (256)
                      ||+|+.+.+-. ...        ...+        ....+++.+.+.|+|||++++-..+.. ..+   .+.+.+.+...
T Consensus       155 yDvIi~D~~dp-~~~--------~~~L--------~t~eF~~~~~~~L~~~Gi~v~q~~s~~~~~~~~~~i~~~l~~vF~  217 (290)
T d1xj5a_         155 YDAVIVDSSDP-IGP--------AKEL--------FEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFK  217 (290)
T ss_dssp             EEEEEECCCCT-TSG--------GGGG--------GSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCS
T ss_pred             ccEEEEcCCCC-CCc--------chhh--------CCHHHHHHHHHhcCCCcEEEEecCCcHHHHHHHHHHHhhhhhhcc
Confidence            99999986421 110        0111        246889999999999999998654432 222   33444445443


Q ss_pred             cE
Q 025211          192 AA  193 (256)
Q Consensus       192 ~~  193 (256)
                      ..
T Consensus       218 ~~  219 (290)
T d1xj5a_         218 GS  219 (290)
T ss_dssp             SC
T ss_pred             cc
Confidence            33


No 87 
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=99.00  E-value=8e-10  Score=88.23  Aligned_cols=90  Identities=19%  Similarity=0.147  Sum_probs=68.2

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA  105 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~  105 (256)
                      -+++.+++...   ..++++|||+|||+|.+|..++..      +..|+++|+++.+++.++++...+ ....++++|+.
T Consensus         8 ~i~~~iv~~~~---~~~~d~VlEIGpG~G~LT~~Ll~~------~~~v~avE~D~~l~~~l~~~~~~~-~n~~i~~~D~l   77 (235)
T d1qama_           8 HNIDKIMTNIR---LNEHDNIFEIGSGKGHFTLELVQR------CNFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDIL   77 (235)
T ss_dssp             HHHHHHHTTCC---CCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGG
T ss_pred             HHHHHHHHhcC---CCCCCeEEEECCCchHHHHHHHhC------cCceEEEeeccchHHHHHHHhhcc-cchhhhhhhhh
Confidence            34555666543   258999999999999999988876      348999999999999998875422 23399999999


Q ss_pred             hchhhhcCCCccEEEECCCCCC
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVP  127 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~  127 (256)
                      +...+  ......|++|.||+.
T Consensus        78 ~~~~~--~~~~~~vv~NLPYnI   97 (235)
T d1qama_          78 QFKFP--KNQSYKIFGNIPYNI   97 (235)
T ss_dssp             GCCCC--SSCCCEEEEECCGGG
T ss_pred             hcccc--ccccceeeeeehhhh
Confidence            87432  234567899999963


No 88 
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99  E-value=2.3e-09  Score=87.80  Aligned_cols=114  Identities=14%  Similarity=0.124  Sum_probs=81.6

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-----CcceEEEcchhhchhhhcCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-----VHADLINTDIASGLEKRLAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~  115 (256)
                      ..+++||-+|-|.|..+.++.+.    .+..+++++|+++++++.|++.+..+.     ...+++.+|+...+.. .+++
T Consensus        77 ~~pk~vLiiGgG~G~~~~~~l~~----~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~~  151 (285)
T d2o07a1          77 PNPRKVLIIGGGDGGVLREVVKH----PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDA  151 (285)
T ss_dssp             SSCCEEEEEECTTSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSC
T ss_pred             cCcCeEEEeCCCchHHHHHHHHc----CCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhc-CCCC
Confidence            46799999999999975444332    455699999999999999999775431     1238999999988765 3578


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA  176 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  176 (256)
                      ||+|+++.+-. ....                ..-....+++.+.+.|+|||++++-..+.
T Consensus       152 yDvIi~D~~~p-~~~~----------------~~L~t~eF~~~~~~~L~~~Gi~v~q~~s~  195 (285)
T d2o07a1         152 FDVIITDSSDP-MGPA----------------ESLFKESYYQLMKTALKEDGVLCCQGECQ  195 (285)
T ss_dssp             EEEEEEECC----------------------------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred             CCEEEEcCCCC-CCcc----------------cccccHHHHHHHHHhcCCCCeEEEeccch
Confidence            99999986321 1100                01124588999999999999999865443


No 89 
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.99  E-value=2.8e-09  Score=87.03  Aligned_cols=132  Identities=13%  Similarity=0.121  Sum_probs=88.4

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-----------CcceEEEcchhhchh
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-----------VHADLINTDIASGLE  109 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----------~~~~~~~~d~~~~~~  109 (256)
                      ..+++||-+|+|.|..+.++.+     ++..+|+++|+++++++.|++.+..+.           ...+++.+|+...+.
T Consensus        71 ~~p~~vLiiG~G~G~~~~~~l~-----~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGGGDGGTVREVLQ-----HDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK  145 (276)
T ss_dssp             SCCCEEEEEECTTSHHHHHHTT-----SCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred             CCCceEEEecCCchHHHHHHHH-----hCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHh
Confidence            5779999999999997544432     344589999999999999998653321           123899999998875


Q ss_pred             hhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-CCHHHHH---HH
Q 025211          110 KRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-NDPSQIC---LQ  185 (256)
Q Consensus       110 ~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~---~~  185 (256)
                      .  .++||+|+++.+-...+..         .        -...++++.+.+.|+|||++++-..+. .....+.   +.
T Consensus       146 ~--~~~yDvIi~D~~~~~~~~~---------~--------L~t~eF~~~~~~~L~~~Gv~v~q~~s~~~~~~~~~~~~~t  206 (276)
T d1mjfa_         146 N--NRGFDVIIADSTDPVGPAK---------V--------LFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKE  206 (276)
T ss_dssp             H--CCCEEEEEEECCCCC----------------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHH
T ss_pred             c--cCCCCEEEEeCCCCCCCcc---------c--------ccCHHHHHhhHhhcCCCceEEEecCCcchhHHHHHHHHHH
Confidence            4  5789999998753211110         0        013588999999999999998855332 2333333   33


Q ss_pred             HHHcCCcEEEEE
Q 025211          186 MMEKGYAARIVV  197 (256)
Q Consensus       186 ~~~~g~~~~~~~  197 (256)
                      +.+. |.....+
T Consensus       207 l~~~-F~~v~~y  217 (276)
T d1mjfa_         207 MKKV-FDRVYYY  217 (276)
T ss_dssp             HHHH-CSEEEEE
T ss_pred             HHhh-CCeeEEE
Confidence            4443 5554444


No 90 
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=98.96  E-value=6.2e-09  Score=84.80  Aligned_cols=135  Identities=19%  Similarity=0.181  Sum_probs=91.6

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC--C---cceEEEcchhhchhhhcCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN--V---HADLINTDIASGLEKRLAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~--~---~~~~~~~d~~~~~~~~~~~~  115 (256)
                      ..+++||-+|-|.|..+.++.+.    .+..+|+.+|++++.++.|++.+..+.  .   ..+++.+|....+.. .+.+
T Consensus        74 ~~p~~vLiiGgG~G~~~~~~l~~----~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~-~~~~  148 (274)
T d1iy9a_          74 PNPEHVLVVGGGDGGVIREILKH----PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQ  148 (274)
T ss_dssp             SSCCEEEEESCTTCHHHHHHTTC----TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT-CCSC
T ss_pred             CCcceEEecCCCCcHHHHHHHhc----CCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhh-cCCC
Confidence            46799999999999975444432    445699999999999999999875432  2   228999999988765 3578


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-CCHHH---HHHHHHHcCC
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-NDPSQ---ICLQMMEKGY  191 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~---~~~~~~~~g~  191 (256)
                      ||+|+.+++-..... .        .+        ....+.+.+.+.|+|||+++.-..+. ...+.   +.+.+++. |
T Consensus       149 yDvIi~D~~~p~~~~-~--------~L--------~t~eFy~~~~~~L~~~Gv~v~q~~s~~~~~~~~~~i~~tl~~~-F  210 (274)
T d1iy9a_         149 YDVIMVDSTEPVGPA-V--------NL--------FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-F  210 (274)
T ss_dssp             EEEEEESCSSCCSCC-C--------CC--------STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-C
T ss_pred             CCEEEEcCCCCCCcc-h--------hh--------ccHHHHHHHHhhcCCCceEEEecCCccccHHHHHHHHHhhhhh-c
Confidence            999999875211111 0        01        13588999999999999999854332 23333   33334333 5


Q ss_pred             cEEEEEe
Q 025211          192 AARIVVQ  198 (256)
Q Consensus       192 ~~~~~~~  198 (256)
                      .....+.
T Consensus       211 ~~v~~y~  217 (274)
T d1iy9a_         211 PITKLYT  217 (274)
T ss_dssp             SEEEEEE
T ss_pred             CceEEEE
Confidence            5555443


No 91 
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=98.95  E-value=2.3e-09  Score=88.56  Aligned_cols=113  Identities=16%  Similarity=0.159  Sum_probs=79.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC--C---cceEEEcchhhchhhhcCCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN--V---HADLINTDIASGLEKRLAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~--~---~~~~~~~d~~~~~~~~~~~~  115 (256)
                      ..+++||-+|-|.|..+.++.+.    .+-.+|+.+|+++++++.|++.+..+.  .   ..+++.+|....+.. .+.+
T Consensus       105 ~~pk~VLIiGgG~G~~~rellk~----~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~  179 (312)
T d2b2ca1         105 PDPKRVLIIGGGDGGILREVLKH----ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNE  179 (312)
T ss_dssp             SSCCEEEEESCTTSHHHHHHTTC----TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTC
T ss_pred             CCCCeEEEeCCCchHHHHHHHHc----CCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCC
Confidence            46789999999999975544432    444589999999999999998765432  1   228999999998765 4678


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT  175 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  175 (256)
                      ||+||++.+-...+.                 ..-....+++.+.+.|+|||+++.-..+
T Consensus       180 yDvII~D~~dp~~~~-----------------~~L~t~eFy~~~~~~L~~~Gi~v~q~~s  222 (312)
T d2b2ca1         180 FDVIITDSSDPVGPA-----------------ESLFGQSYYELLRDALKEDGILSSQGES  222 (312)
T ss_dssp             EEEEEECCC------------------------------HHHHHHHHEEEEEEEEEECCC
T ss_pred             CCEEEEcCCCCCCcc-----------------hhhhhHHHHHHHHhhcCCCcEEEEecCC
Confidence            999999865211100                 0112568899999999999999985543


No 92 
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=98.94  E-value=7.7e-09  Score=82.92  Aligned_cols=133  Identities=16%  Similarity=0.150  Sum_probs=90.1

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      ...+|+|+|||+|.+++.+++.    +|+.+++++|+.+. ++.+..     .....+..+|+.+..+     ..|+++.
T Consensus        81 ~~~~vvDvGGG~G~~~~~l~~~----~P~l~~~v~Dlp~v-i~~~~~-----~~r~~~~~~d~~~~~P-----~ad~~~l  145 (243)
T d1kyza2          81 GLKSLVDVGGGTGAVINTIVSK----YPTIKGINFDLPHV-IEDAPS-----YPGVEHVGGDMFVSIP-----KADAVFM  145 (243)
T ss_dssp             SCSEEEEETCTTSHHHHHHHHH----CTTSEEEEEECTTT-TTTCCC-----CTTEEEEECCTTTCCC-----CCSCEEC
T ss_pred             CCcEEEEecCCCcHHHHHHHHH----CCCCeEEEcccHHh-hhhccc-----CCceEEecccccccCC-----CcceEEE
Confidence            4579999999999998888887    99999999998543 322111     1123888889876532     2355555


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-------------------------
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-------------------------  176 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------------------  176 (256)
                      .--.+..++                   .....+|+++.+.|+|||+++++....                         
T Consensus       146 ~~vlh~~~d-------------------~~~~~iL~~~~~al~pgg~~li~d~~~~~~~~~~~~~~~~~~~d~~ml~~~~  206 (243)
T d1kyza2         146 KWICHDWSD-------------------EHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNP  206 (243)
T ss_dssp             SSSSTTSCH-------------------HHHHHHHHHHHHHCCSSSCEEEEECEECSSCCCCHHHHHHHHHHHHHHHHCS
T ss_pred             EEEeecCCH-------------------HHHHHHHHHHHHhcCCCceEEEEEEEecCCCCCchhhHHHHHHHHHHHhhCC
Confidence            333332222                   235789999999999999998865210                         


Q ss_pred             ----CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEE
Q 025211          177 ----NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKF  211 (256)
Q Consensus       177 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~  211 (256)
                          +..++..+++++.||+...++....   ...++++
T Consensus       207 ~g~ert~~e~~~ll~~AGf~~vkv~~~~~---~~~viE~  242 (243)
T d1kyza2         207 GGKERTQKEFEDLAKGAGFQGFKVHCNAF---NTYIMEF  242 (243)
T ss_dssp             SCCCEEHHHHHHHHHHHCCSCEEEEEEET---TEEEEEE
T ss_pred             CCCcCCHHHHHHHHHHcCCCcEEEEEeCC---CCEEEEe
Confidence                0245788899999999887765533   3355554


No 93 
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=98.94  E-value=9.6e-09  Score=82.36  Aligned_cols=133  Identities=14%  Similarity=0.206  Sum_probs=93.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      ...+|+|+|||+|.+++.+++.    +|+.+++..|. |..++.+..     .-..+++.+|+.+..     ..+|++++
T Consensus        80 ~~~~vvDvGGG~G~~~~~l~~~----~P~l~~~v~Dl-p~vi~~~~~-----~~rv~~~~gD~f~~~-----p~aD~~~l  144 (244)
T d1fp2a2          80 GLESIVDVGGGTGTTAKIICET----FPKLKCIVFDR-PQVVENLSG-----SNNLTYVGGDMFTSI-----PNADAVLL  144 (244)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCC-----BTTEEEEECCTTTCC-----CCCSEEEE
T ss_pred             CceEEEEecCCccHHHHHHHHh----CCCCeEEEecC-HHHHHhCcc-----cCceEEEecCcccCC-----CCCcEEEE
Confidence            4578999999999998888877    99999999998 444443211     112389999987742     25799998


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC---eEEEEEEeC---C-------------------
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR---GWLYLVTLT---A-------------------  176 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg---G~l~~~~~~---~-------------------  176 (256)
                      .-.++..+++                   ....+|+++++.|+||   |+++++...   .                   
T Consensus       145 ~~vLHdw~d~-------------------~~~~iL~~~~~al~pgg~~~~lli~e~~~~~~~~~~~~~~~~~~~dl~m~~  205 (244)
T d1fp2a2         145 KYILHNWTDK-------------------DCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC  205 (244)
T ss_dssp             ESCGGGSCHH-------------------HHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG
T ss_pred             EeecccCChH-------------------HHHHHHHHHHHHcCcccCCcEEEEEEeecCCCCCCchHHHHHHHHHHHHHh
Confidence            6555444332                   2568999999999999   777765421   0                   


Q ss_pred             -----CCHHHHHHHHHHcCCcEEEEEecCCCCccEEEEEE
Q 025211          177 -----NDPSQICLQMMEKGYAARIVVQRSTEEENLHIIKF  211 (256)
Q Consensus       177 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~  211 (256)
                           +..++..+++++.||+...+.+...   ...+++.
T Consensus       206 ~~G~ert~~e~~~ll~~AGf~~~~i~~~~~---~~svIE~  242 (244)
T d1fp2a2         206 LNGKERNEEEWKKLFIEAGFQHYKISPLTG---FLSLIEI  242 (244)
T ss_dssp             GTCCCEEHHHHHHHHHHTTCCEEEEEEEET---TEEEEEE
T ss_pred             CCCcCCCHHHHHHHHHHcCCceEEEEECCC---CeEEEEE
Confidence                 1245788899999999887766543   3455554


No 94 
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}
Probab=98.92  E-value=2e-09  Score=82.40  Aligned_cols=131  Identities=13%  Similarity=0.110  Sum_probs=90.0

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh---hhcCCCc
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE---KRLAGLV  116 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~f  116 (256)
                      ..++..++|..+|.|..+..+.+.      +++|+|+|.++.+++.+++.   ..-...+++.++.+...   ....+++
T Consensus        16 ~~~g~~~vD~T~G~GGhs~~iL~~------~~~viaiD~D~~ai~~a~~~---~~~~~~~~~~~f~~~~~~l~~~~~~~v   86 (182)
T d1wg8a2          16 VRPGGVYVDATLGGAGHARGILER------GGRVIGLDQDPEAVARAKGL---HLPGLTVVQGNFRHLKRHLAALGVERV   86 (182)
T ss_dssp             CCTTCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHT---CCTTEEEEESCGGGHHHHHHHTTCSCE
T ss_pred             CCCCCEEEEeCCCCcHHHHHHhcc------cCcEEEEhhhhhHHHHHhhc---cccceeEeehHHHHHHHHHHHcCCCcc
Confidence            368999999999999987666543      45999999999999988763   12123777777655432   2334679


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCC
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGY  191 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~  191 (256)
                      |.|+.+..+...            .+....++.......|....++|++||+++++.........+.+.+++.++
T Consensus        87 dgIl~DLGvSs~------------qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs~Ed~ivk~~~~e~~~  149 (182)
T d1wg8a2          87 DGILADLGVSSF------------HLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRESGL  149 (182)
T ss_dssp             EEEEEECSCCHH------------HHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSHHHHHHHHHHHHHHCS
T ss_pred             CEEEEEccCCHH------------HhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecccchhHHHHHHHhhccc
Confidence            999998654211            011122345567788999999999999999877543333346666666554


No 95 
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.89  E-value=1.5e-08  Score=85.99  Aligned_cols=102  Identities=16%  Similarity=0.188  Sum_probs=79.8

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc----------------eEEEcchh
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA----------------DLINTDIA  105 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~----------------~~~~~d~~  105 (256)
                      ++.+|||..||||..++-.++.+    +...|++.|+|+.+++.+++|+..|+...                .+.+.|+.
T Consensus        45 ~~~~vLD~~sasG~rsiRya~E~----~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~  120 (375)
T d2dula1          45 NPKIVLDALSATGIRGIRFALET----PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDAN  120 (375)
T ss_dssp             CCSEEEESSCTTSHHHHHHHHHS----SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHH
T ss_pred             CCCEEEEcCCCccHHHHHHHHhC----CCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhh
Confidence            67899999999999998776663    33489999999999999999999997642                45566665


Q ss_pred             hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ..+.. ....||+|..+| |..                        ...+++.+.+.++.||.+.+..
T Consensus       121 ~~~~~-~~~~fDvIDiDP-fGs------------------------~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         121 RLMAE-RHRYFHFIDLDP-FGS------------------------PMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             HHHHH-STTCEEEEEECC-SSC------------------------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhHh-hcCcCCcccCCC-CCC------------------------cHHHHHHHHHHhccCCEEEEEe
Confidence            55433 246799999996 431                        2467888888999999999854


No 96 
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.83  E-value=2.2e-08  Score=81.47  Aligned_cols=88  Identities=19%  Similarity=0.316  Sum_probs=69.0

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcc
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTD  103 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d  103 (256)
                      -+++.+.+...   ..++..|||+|+|+|.+|..+++.      +..++++|+++.+++..++.+..+...  .+++.+|
T Consensus         8 ~i~~kIv~~~~---~~~~d~VlEIGPG~G~LT~~Ll~~------~~~v~aiE~D~~l~~~L~~~~~~~~~~~~~~~i~~D   78 (278)
T d1zq9a1           8 LIINSIIDKAA---LRPTDVVLEVGPGTGNMTVKLLEK------AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGD   78 (278)
T ss_dssp             HHHHHHHHHTC---CCTTCEEEEECCTTSTTHHHHHHH------SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESC
T ss_pred             HHHHHHHHHhC---CCCCCEEEEECCCchHHHHHHHhc------CCcEEEEEEccchhHHHHHHHhhhccccchhhhHHH
Confidence            34556655543   257899999999999999988876      348999999999999999887655442  2899999


Q ss_pred             hhhchhhhcCCCccEEEECCCCC
Q 025211          104 IASGLEKRLAGLVDVMVVNPPYV  126 (256)
Q Consensus       104 ~~~~~~~~~~~~fD~Ii~npP~~  126 (256)
                      +.....    ..++.||+|.||+
T Consensus        79 ~l~~~~----~~~~~vV~NLPY~   97 (278)
T d1zq9a1          79 VLKTDL----PFFDTCVANLPYQ   97 (278)
T ss_dssp             TTTSCC----CCCSEEEEECCGG
T ss_pred             Hhhhhh----hhhhhhhcchHHH
Confidence            987632    3467899999996


No 97 
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=98.80  E-value=1.3e-10  Score=93.41  Aligned_cols=89  Identities=19%  Similarity=0.230  Sum_probs=67.4

Q ss_pred             HHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc
Q 025211           28 VDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG  107 (256)
Q Consensus        28 ~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~  107 (256)
                      ++.+++.+.   ..++.+|||||||+|.+|..+++.      +..|+|+|+++.+++.++++.... ...+++++|+.+.
T Consensus        18 i~kIv~~~~---~~~~d~VLEIGpG~G~LT~~L~~~------~~~v~aIE~D~~l~~~l~~~~~~~-~n~~ii~~D~l~~   87 (245)
T d1yuba_          18 LNQIIKQLN---LKETDTVYEIGTGKGHLTTKLAKI------SKQVTSIELDSHLFNLSSEKLKLN-TRVTLIHQDILQF   87 (245)
T ss_dssp             HHHHHHHCC---CCSSEEEEECSCCCSSCSHHHHHH------SSEEEESSSSCSSSSSSSCTTTTC-SEEEECCSCCTTT
T ss_pred             HHHHHHhcC---CCCCCeEEEECCCccHHHHHHHhh------cCceeEeeecccchhhhhhhhhhc-cchhhhhhhhhcc
Confidence            455555543   257899999999999999888876      348999999999998877654321 1338999999886


Q ss_pred             hhhhcCCCccEEEECCCCCCC
Q 025211          108 LEKRLAGLVDVMVVNPPYVPT  128 (256)
Q Consensus       108 ~~~~~~~~fD~Ii~npP~~~~  128 (256)
                      .  +....++.|++|.||+..
T Consensus        88 ~--~~~~~~~~vv~NLPY~Is  106 (245)
T d1yuba_          88 Q--FPNKQRYKIVGNIPYHLS  106 (245)
T ss_dssp             T--CCCSSEEEEEEECCSSSC
T ss_pred             c--cccceeeeEeeeeehhhh
Confidence            3  334677889999999754


No 98 
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}
Probab=98.75  E-value=1.9e-07  Score=71.07  Aligned_cols=136  Identities=13%  Similarity=0.125  Sum_probs=88.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchh------hhcC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLE------KRLA  113 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~------~~~~  113 (256)
                      +++.+|||+||+.|.++..+.+.+.   ....++++|+.+-           ..++. .++++|+.+...      ....
T Consensus        21 k~~~~vlDLg~aPGgw~q~~~~~~~---~~~~v~~vDl~~~-----------~~i~~~~~~~~d~~~~~~~~~~~~~~~~   86 (180)
T d1ej0a_          21 KPGMTVVDLGAAPGGWSQYVVTQIG---GKGRIIACDLLPM-----------DPIVGVDFLQGDFRDELVMKALLERVGD   86 (180)
T ss_dssp             CTTCEEEEESCTTCHHHHHHHHHHC---TTCEEEEEESSCC-----------CCCTTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred             CCCCeEEEEeccCCcceEEEEeecc---ccceEEEeecccc-----------cccCCceEeecccccchhhhhhhhhccC
Confidence            5789999999999999988887654   3468999998762           12333 788888765432      1234


Q ss_pred             CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcE
Q 025211          114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAA  193 (256)
Q Consensus       114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~  193 (256)
                      .++|+|+++.....+.....          +.....+.....+..+.++|++||.+++-........++...+....-++
T Consensus        87 ~~~DlVlSD~ap~~sg~~~~----------d~~~~~~L~~~~l~~a~~~Lk~gG~fV~K~F~g~~~~~l~~~l~~~F~~V  156 (180)
T d1ej0a_          87 SKVQVVMSDMAPNMSGTPAV----------DIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKV  156 (180)
T ss_dssp             CCEEEEEECCCCCCCSCHHH----------HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHEEEE
T ss_pred             cceeEEEecccchhcccchh----------HHHHHHHHHHHHHHhhhhccCCCCcEEEEEecCccHHHHHHHHHhhcCEE
Confidence            67999999865443322110          00011224456677788999999999997665555666777766543233


Q ss_pred             EEEEecC
Q 025211          194 RIVVQRS  200 (256)
Q Consensus       194 ~~~~~~~  200 (256)
                      ..+.+..
T Consensus       157 ~~~KP~a  163 (180)
T d1ej0a_         157 KVRKPDS  163 (180)
T ss_dssp             EEECCTT
T ss_pred             EEECCCC
Confidence            4444443


No 99 
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=98.57  E-value=3.1e-08  Score=79.51  Aligned_cols=92  Identities=12%  Similarity=0.032  Sum_probs=65.3

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA  105 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~  105 (256)
                      .+++.+.+.+.   ..+++.|||+|||+|.+|..+++.      +.+++++|+++.+++.+++..... ...+++++|+.
T Consensus         8 ~~~~~Iv~~~~---~~~~d~vlEIGpG~G~LT~~Ll~~------~~~v~aiEiD~~l~~~L~~~~~~~-~~~~ii~~D~l   77 (252)
T d1qyra_           8 FVIDSIVSAIN---PQKGQAMVEIGPGLAALTEPVGER------LDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDAM   77 (252)
T ss_dssp             HHHHHHHHHHC---CCTTCCEEEECCTTTTTHHHHHTT------CSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCGG
T ss_pred             HHHHHHHHhcC---CCCCCEEEEECCCchHHHHHHHcc------CCceEEEEeccchhHHHHHHhhhc-cchhHHhhhhh
Confidence            34555666553   257899999999999999887764      348999999999999887643222 13389999998


Q ss_pred             hchhhhc---CCCccEEEECCCCCC
Q 025211          106 SGLEKRL---AGLVDVMVVNPPYVP  127 (256)
Q Consensus       106 ~~~~~~~---~~~fD~Ii~npP~~~  127 (256)
                      +......   .+..-.|++|.||+.
T Consensus        78 ~~~~~~~~~~~~~~~~vvgNlPY~I  102 (252)
T d1qyra_          78 TFNFGELAEKMGQPLRVFGNLPYNI  102 (252)
T ss_dssp             GCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred             hhcccccccccCCCeEEEecchHHH
Confidence            7633211   123347889999974


No 100
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]}
Probab=98.35  E-value=1.4e-06  Score=69.21  Aligned_cols=81  Identities=16%  Similarity=0.159  Sum_probs=65.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC----------cceEEEcchhhchhhh
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV----------HADLINTDIASGLEKR  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~----------~~~~~~~d~~~~~~~~  111 (256)
                      ...+|||.-||.|..++.++..      +++|+++|-++......++++.+...          ..+++++|..+.+...
T Consensus        88 ~~~~VlD~TaGlG~Da~vlA~~------G~~V~~iEr~p~l~~ll~d~l~r~~~~~~~~~~~~~ri~li~~Ds~~~L~~~  161 (250)
T d2oyra1          88 YLPDVVDATAGLGRDAFVLASV------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI  161 (250)
T ss_dssp             BCCCEEETTCTTCHHHHHHHHH------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC
T ss_pred             CCCEEEECCCcccHHHHHHHhC------CCEEEEEccCHHHHHHHHHHHHHHHhCchhHHHHhhhheeecCcHHHHHhcc
Confidence            3458999999999999999887      46899999999998888887765321          1289999998887653


Q ss_pred             cCCCccEEEECCCCCCCC
Q 025211          112 LAGLVDVMVVNPPYVPTP  129 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~~  129 (256)
                       ..+||+|+.+|+|-...
T Consensus       162 -~~~~DvIYlDPMFp~~~  178 (250)
T d2oyra1         162 -TPRPQVVYLDPMFPHKQ  178 (250)
T ss_dssp             -SSCCSEEEECCCCCCCC
T ss_pred             -CCCCCEEEECCCCcccc
Confidence             56799999999996543


No 101
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]}
Probab=98.31  E-value=7e-07  Score=70.48  Aligned_cols=103  Identities=15%  Similarity=0.104  Sum_probs=66.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVM  119 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~I  119 (256)
                      ++++|||+|++.|.-++.++..+....++++++++|+++.........    .-..+++++|..+..  .......+|+|
T Consensus        80 KPk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDId~~~~~~~~~~----~~~I~~i~gDs~~~~~~~~l~~~~~dlI  155 (232)
T d2bm8a1          80 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD----MENITLHQGDCSDLTTFEHLREMAHPLI  155 (232)
T ss_dssp             CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG----CTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCcChhhhhhhhcc----ccceeeeecccccHHHHHHHHhcCCCEE
Confidence            689999999999998887777665445678999999987654322111    112378888865432  22334568988


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      +.+--+.                     .......+  ....+|++||++++
T Consensus       156 fID~~H~---------------------~~~v~~~~--~~~~lLk~GG~iIv  184 (232)
T d2bm8a1         156 FIDNAHA---------------------NTFNIMKW--AVDHLLEEGDYFII  184 (232)
T ss_dssp             EEESSCS---------------------SHHHHHHH--HHHHTCCTTCEEEE
T ss_pred             EEcCCcc---------------------hHHHHHHH--HHhcccCcCCEEEE
Confidence            8853211                     01112222  24579999999998


No 102
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]}
Probab=98.02  E-value=8.1e-06  Score=64.73  Aligned_cols=89  Identities=19%  Similarity=0.206  Sum_probs=60.8

Q ss_pred             eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211           98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN  177 (256)
Q Consensus        98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~  177 (256)
                      +++++|..+.+...+++++|+|+++|||......-.. ......      =...+...+.++.++|+|+|.+++... ..
T Consensus         6 ~i~~gDcle~l~~lpd~sVdliitdPPY~~~~~~~d~-~~~~~~------y~~~~~~~~~e~~rvLk~~g~~~~~~~-~~   77 (256)
T d1g60a_           6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDS-FDSHNE------FLAFTYRWIDKVLDKLDKDGSLYIFNT-PF   77 (256)
T ss_dssp             SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGC-CSSHHH------HHHHHHHHHHHHHHHEEEEEEEEEEEC-HH
T ss_pred             EEEeccHHHHHhhCcCCCcCEEEECCCCCCCcCcCcC-CCCHHH------HHHHHHHHHHHhhhccccCcccccccC-ch
Confidence            7999999999888778999999999999754321100 000000      012355678899999999999887443 22


Q ss_pred             CHHHHHHHHHHcCCcEE
Q 025211          178 DPSQICLQMMEKGYAAR  194 (256)
Q Consensus       178 ~~~~~~~~~~~~g~~~~  194 (256)
                      ....+...+.+.||...
T Consensus        78 ~~~~~~~~~~~~g~~~~   94 (256)
T d1g60a_          78 NCAFICQYLVSKGMIFQ   94 (256)
T ss_dssp             HHHHHHHHHHHTTCEEE
T ss_pred             hhhhhhhhhhcccceee
Confidence            34456677888888754


No 103
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=97.69  E-value=0.00012  Score=58.45  Aligned_cols=87  Identities=18%  Similarity=0.163  Sum_probs=59.9

Q ss_pred             eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-
Q 025211           98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-  176 (256)
Q Consensus        98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-  176 (256)
                      -++.+|..+.+..+.++++|+|+++|||...-..          +.....-.+.+...+.++.++|||+|.+++..... 
T Consensus         6 ~~~~~D~le~l~~l~d~SIDliitDPPYn~~~~~----------~~~~~~y~~~~~~~~~e~~rvLk~~G~~~~~~~~~~   75 (279)
T d1eg2a_           6 VYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLAD----------WDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQY   75 (279)
T ss_dssp             EEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGG----------GGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCC
T ss_pred             eEEechHHHHHhhCcCCCccEEEECCCCCCCccc----------ccCHHHHHHHHHHHHHHHHHHhCCCccEEEecCccc
Confidence            5778999999888888999999999999753221          11111223456788899999999999999854321 


Q ss_pred             -------CCHHHHHHHHHHcCCcEE
Q 025211          177 -------NDPSQICLQMMEKGYAAR  194 (256)
Q Consensus       177 -------~~~~~~~~~~~~~g~~~~  194 (256)
                             .....+...+...+|...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~  100 (279)
T d1eg2a_          76 QGEAGSGDLISIISHMRQNSKMLLA  100 (279)
T ss_dssp             CCCTTBCCHHHHHHHHHHHCCCEEE
T ss_pred             cccccccchhhHHHHHHhccCceee
Confidence                   112344555667777653


No 104
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius [TaxId: 197575]}
Probab=97.63  E-value=0.0023  Score=51.66  Aligned_cols=151  Identities=14%  Similarity=0.087  Sum_probs=90.3

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCC
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPP  124 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP  124 (256)
                      +|+|+.||.|.+.+.+.+.    +-+ .+.++|+++.+.+..+.|.     +..++.+|+.+..... -..+|+++..||
T Consensus         2 k~~~lF~G~Gg~~~gl~~a----G~~-~~~a~e~d~~a~~~~~~N~-----~~~~~~~Di~~~~~~~-~~~~dll~~g~P   70 (324)
T d1dcta_           2 NLISLFSGAGGLDLGFQKA----GFR-IICANEYDKSIWKTYESNH-----SAKLIKGDISKISSDE-FPKCDGIIGGPP   70 (324)
T ss_dssp             EEEEESCSSCHHHHHHHHH----TCE-EEEEEECCHHHHHHHHHHC-----CSEEEESCTTTSCGGG-SCCCSEEEECCC
T ss_pred             eEEEeCcCcCHHHHHHHHC----CCE-EEEEEeCCHHHHHHHHHHC-----CCCCccCChhhCCHhH-cccccEEeeccc
Confidence            6999999999988766554    222 4679999999998877774     3477889988874432 246899999999


Q ss_pred             CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------CHHHHHHHHHHcCCcEEEEEe
Q 025211          125 YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------DPSQICLQMMEKGYAARIVVQ  198 (256)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~  198 (256)
                      -...+........      .++.+ .....+++ +...++|.-+++=..+...      ....+...+...||.+.....
T Consensus        71 Cq~fS~ag~~~g~------~d~r~-~l~~~~~~-~i~~~~Pk~~~lENV~~~~~~~~~~~~~~~l~~l~~lGY~v~~~vl  142 (324)
T d1dcta_          71 CQSWSEGGSLRGI------DDPRG-KLFYEYIR-ILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILL  142 (324)
T ss_dssp             CTTTSSSSCCCCS------SSHHH-HHHHHHHH-HHHHHCCSEEEEEEEGGGGSGGGHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             ccccccccccccc------ccccc-chHHHHHH-HHHhhCCceeeccccccccccccchhhHHHHhHHhhCCCccceeee
Confidence            8766553321100      00111 12233333 4556788644443222221      123445555666776544332


Q ss_pred             ------cCCCCccEEEEEEEec
Q 025211          199 ------RSTEEENLHIIKFWRD  214 (256)
Q Consensus       199 ------~~~~~~~~~l~~~~~~  214 (256)
                            ..+..++++++..+++
T Consensus       143 na~~~GvPQ~R~R~fiv~~r~~  164 (324)
T d1dcta_         143 NANDYGVAQDRKRVFYIGFRKE  164 (324)
T ss_dssp             EGGGGTCSBCCEEEEEEEEEGG
T ss_pred             ecccccCchhhceeeEeeecCC
Confidence                  2345677777776654


No 105
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]}
Probab=97.60  E-value=0.0001  Score=58.10  Aligned_cols=58  Identities=19%  Similarity=0.271  Sum_probs=47.5

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE   91 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~   91 (256)
                      ...|++.++...    +.++..|||+.||+|+.++++.+.      +-..+|+|++++.++.|++++.
T Consensus       198 P~~L~~~lI~~~----s~~gd~VlDpF~GSGTT~~aa~~~------~R~~ig~El~~~y~~~a~~Rl~  255 (256)
T d1g60a_         198 PRDLIERIIRAS----SNPNDLVLDCFMGSGTTAIVAKKL------GRNFIGCDMNAEYVNQANFVLN  255 (256)
T ss_dssp             CHHHHHHHHHHH----CCTTCEEEESSCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHh----CCCCCEEEECCCCchHHHHHHHHc------CCeEEEEeCCHHHHHHHHHHHc
Confidence            356677776665    468999999999999988766654      3489999999999999999875


No 106
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]}
Probab=97.56  E-value=0.0019  Score=52.54  Aligned_cols=153  Identities=15%  Similarity=0.088  Sum_probs=90.8

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+.+|||+.||.|.+...+.+.    +-+ .+.++|+++.+++..+.|..      ...++|+.+..... -..+|+++.
T Consensus        10 ~~lrv~~lFsG~Gg~~~gl~~a----G~~-~v~a~e~d~~a~~~~~~N~~------~~~~~Di~~~~~~~-~~~~Dll~g   77 (327)
T d2c7pa1          10 TGLRFIDLFAGLGGFRLALESC----GAE-CVYSNEWDKYAQEVYEMNFG------EKPEGDITQVNEKT-IPDHDILCA   77 (327)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHT----TCE-EEEEECCCHHHHHHHHHHHS------CCCBSCGGGSCGGG-SCCCSEEEE
T ss_pred             CCCeEEEECccccHHHHHHHHC----CCe-EEEEEeCCHHHHHHHHHHCC------CCCcCchhcCchhh-cceeeeeec
Confidence            5789999999999988776554    222 47889999999999888863      23357777764332 246999999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC------CHHHHHHHHHHcCCcEEE
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN------DPSQICLQMMEKGYAARI  195 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~~~~~~~~~~g~~~~~  195 (256)
                      .||.-..+.......     .. +..+ .....+++ +.+.++|.=.++=..+...      ....+...+++.||....
T Consensus        78 gpPCq~fS~ag~~~g-----~~-d~r~-~l~~~~~~-~i~~~kP~~~~lENV~~~~~~~~~~~~~~i~~~l~~lGY~~~~  149 (327)
T d2c7pa1          78 GFPCQAFSISGKQKG-----FE-DSRG-TLFFDIAR-IVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA  149 (327)
T ss_dssp             ECCCTTTCTTSCCCG-----GG-STTS-CHHHHHHH-HHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred             ccccchhhhhhhhcC-----Cc-ccch-hHHHHHHH-HHhccCCcEEecccchhhhhhccchhhHHhhhHHHhcCCccee
Confidence            999876655432110     11 1111 12334443 3456788643332222211      124567788888887543


Q ss_pred             EEe------cCCCCccEEEEEEEec
Q 025211          196 VVQ------RSTEEENLHIIKFWRD  214 (256)
Q Consensus       196 ~~~------~~~~~~~~~l~~~~~~  214 (256)
                      ...      ..+...+++++..+++
T Consensus       150 ~vl~a~~~GvPQ~R~R~fivg~r~~  174 (327)
T d2c7pa1         150 KVLNALDYGIPQKRERIYMICFRND  174 (327)
T ss_dssp             EEEEGGGGTCSBCCEEEEEEEEBGG
T ss_pred             eEecHHHcCCCchhhhheeeeeccC
Confidence            221      1234566666655543


No 107
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.55  E-value=0.00017  Score=59.27  Aligned_cols=77  Identities=9%  Similarity=0.038  Sum_probs=55.1

Q ss_pred             HHHHHHHHHhhcc---cccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE
Q 025211           25 FALVDALLADRIN---LVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN  101 (256)
Q Consensus        25 ~~l~~~l~~~~~~---~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~  101 (256)
                      .-+++.+++.+.-   ....++..|||+|.|.|.+|..+....+   + -+++++|+++..++..++...  +-+..+++
T Consensus        23 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~---~-~~v~~iE~D~~~~~~L~~~~~--~~~~~ii~   96 (322)
T d1i4wa_          23 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC---P-RQYSLLEKRSSLYKFLNAKFE--GSPLQILK   96 (322)
T ss_dssp             HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC---C-SEEEEECCCHHHHHHHHHHTT--TSSCEEEC
T ss_pred             HHHHHHHHHHhcCCccccccCCCeEEEECCCCCHHHHHHHhcCC---C-CEEEEEECCHHHHHHHHHhcc--CCCcEEEe
Confidence            4566666665431   1123578999999999999988887632   2 279999999999998887643  22348888


Q ss_pred             cchhhc
Q 025211          102 TDIASG  107 (256)
Q Consensus       102 ~d~~~~  107 (256)
                      +|+...
T Consensus        97 ~D~l~~  102 (322)
T d1i4wa_          97 RDPYDW  102 (322)
T ss_dssp             SCTTCH
T ss_pred             Cchhhc
Confidence            888754


No 108
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]}
Probab=97.51  E-value=6.4e-05  Score=61.20  Aligned_cols=60  Identities=12%  Similarity=0.062  Sum_probs=48.5

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH   93 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~   93 (256)
                      ...|++.++...    ..++..|||+.||+|+.++++.++      +-..+|+|++++.++.|++++...
T Consensus       236 P~~L~~rlI~~~----s~~gdiVlDpF~GSGTT~~AA~~l------gR~~Ig~El~~~y~~~a~~Rl~~~  295 (320)
T d1booa_         236 PAKLPEFFIRML----TEPDDLVVDIFGGSNTTGLVAERE------SRKWISFEMKPEYVAASAFRFLDN  295 (320)
T ss_dssp             CTHHHHHHHHHH----CCTTCEEEETTCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHGGGSCS
T ss_pred             chHHHHHhhhhc----ccCCCEEEecCCCCcHHHHHHHHc------CCcEEEEeCCHHHHHHHHHHHHhc
Confidence            456777777655    468999999999999988776665      348999999999999999887543


No 109
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50  E-value=0.0013  Score=53.76  Aligned_cols=155  Identities=15%  Similarity=0.144  Sum_probs=85.8

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhc-CCCccEEE
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRL-AGLVDVMV  120 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~fD~Ii  120 (256)
                      +.+|+|+.||.|.+...+...    +-+. -+.++|+++.+++..+.|..    ...++.+|+.+...... ...+|+++
T Consensus         2 p~kv~~lF~G~Gg~~~gl~~a----G~~~~~~~a~E~~~~a~~~~~~n~~----~~~~~~~di~~~~~~~~~~~~~Dll~   73 (343)
T d1g55a_           2 PLRVLELYSGVGGMHHALRES----CIPAQVVAAIDVNTVANEVYKYNFP----HTQLLAKTIEGITLEEFDRLSFDMIL   73 (343)
T ss_dssp             CEEEEEETCTTCHHHHHHHHH----TCSEEEEEEECCCHHHHHHHHHHCT----TSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred             CCEEEEcCcCccHHHHHHHHc----CCCCeEEEEEECCHHHHHHHHHHCC----CCCcccCchhhCCHhHcCCCCccEEE
Confidence            568999999999987665544    2222 37899999999988777642    23677788876643322 24699999


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcc--ccCeEEEEEEeCCC-----CHHHHHHHHHHcCCcE
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLL--SKRGWLYLVTLTAN-----DPSQICLQMMEKGYAA  193 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L--kpgG~l~~~~~~~~-----~~~~~~~~~~~~g~~~  193 (256)
                      ..||--..+.......     . .++.+ .....+++-+. .+  +|.-  ++++....     ..+.+.+.|++.||.+
T Consensus        74 ggpPCq~fS~ag~~~~-----~-~d~r~-~l~~~~~~~i~-~~~~kPk~--~i~ENV~~l~~~~~~~~i~~~l~~~GY~v  143 (343)
T d1g55a_          74 MSPPCQPFTRIGRQGD-----M-TDSRT-NSFLHILDILP-RLQKLPKY--ILLENVKGFEVSSTRDLLIQTIENCGFQY  143 (343)
T ss_dssp             ECCC-------------------------CHHHHHHHHGG-GCSSCCSE--EEEEEETTGGGSHHHHHHHHHHHHTTEEE
T ss_pred             eecccccccccccccc-----c-ccccc-cccchhhhhHh-hhcCCCce--eeeeccCCcccchhhHHHHhhhhcccccc
Confidence            9999766554321100     0 01111 11233333333 23  5753  33343222     2356778888899876


Q ss_pred             EEEEec------CCCCccEEEEEEEecC
Q 025211          194 RIVVQR------STEEENLHIIKFWRDF  215 (256)
Q Consensus       194 ~~~~~~------~~~~~~~~l~~~~~~~  215 (256)
                      ......      .+...+++++..+++.
T Consensus       144 ~~~vlna~dyGvPQ~R~Rvfivg~r~~~  171 (343)
T d1g55a_         144 QEFLLSPTSLGIPNSRLRYFLIAKLQSE  171 (343)
T ss_dssp             EEEEECGGGGTCSCCCCEEEEEEEESSS
T ss_pred             ceeeeeccccCCcccceeEEEEEEeCCc
Confidence            543322      2456777777666543


No 110
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]}
Probab=97.48  E-value=0.00011  Score=59.72  Aligned_cols=69  Identities=14%  Similarity=0.119  Sum_probs=50.1

Q ss_pred             eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211           98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus        98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .++++|..+.+....++++|+|+.+|||....+....... ..      .-.+.+...+.+++++|+++|.+++..
T Consensus        14 ~l~~GD~le~l~~l~~~sVdli~tDPPY~~~~~~~~~~~~-~~------~y~~~~~~~l~~~~rvLk~~G~i~i~~   82 (320)
T d1booa_          14 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLE-QH------EYVDWFLSFAKVVNKKLKPDGSFVVDF   82 (320)
T ss_dssp             EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCH-HH------HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEehhHHHHHhhCccCCCCEEEECCCCcCCCCCCCCCCC-HH------HHHHHHHHHHHHHHHhCcccCcccccc
Confidence            8999999999888888999999999999754332110000 00      012245677899999999999999854


No 111
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Probab=97.47  E-value=0.00012  Score=57.28  Aligned_cols=108  Identities=10%  Similarity=0.009  Sum_probs=59.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      ++..+|+|+|||.|.++..++..    .+...+.|+++--..-+. ......++.+. .+...+-..   ...++..|+|
T Consensus        65 ~~~~~vvDlG~~pGgws~~~a~~----~~v~~V~g~~iG~d~~e~-P~~~~~~~~ni~~~~~~~dv~---~l~~~~~D~v  136 (257)
T d2p41a1          65 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEE-PIPMSTYGWNLVRLQSGVDVF---FIPPERCDTL  136 (257)
T ss_dssp             CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCC-CCCCCSTTGGGEEEECSCCTT---TSCCCCCSEE
T ss_pred             cCCCeEEEecCCCChHHHHHHhh----cCCCceeEEEecCccccC-CccccccccccccchhhhhHH---hcCCCcCCEE
Confidence            57789999999999998776654    333467777773211000 00001111122 333222211   2235789999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      +|+.-=. .+..+     .+         .....++++.+.+.|+|||.+++
T Consensus       137 lcDm~es-s~~~~-----vd---------~~Rtl~vLela~~wLk~gg~Fvv  173 (257)
T d2p41a1         137 LCDIGES-SPNPT-----VE---------AGRTLRVLNLVENWLSNNTQFCV  173 (257)
T ss_dssp             EECCCCC-CSSHH-----HH---------HHHHHHHHHHHHHHCCTTCEEEE
T ss_pred             EeeCCCC-CCCch-----hh---------hhhHHHHHHHHHHHcccCCEEEE
Confidence            9985211 11111     11         11133667888899999998776


No 112
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=97.46  E-value=9.9e-05  Score=54.71  Aligned_cols=98  Identities=19%  Similarity=0.252  Sum_probs=62.4

Q ss_pred             CCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc-------hhhchhhhc
Q 025211           41 HHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD-------IASGLEKRL  112 (256)
Q Consensus        41 ~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d-------~~~~~~~~~  112 (256)
                      +++.+||=+||| .|.+++.+++.     .+++|+++|.+++.++.|++.    +....+...+       ..+......
T Consensus        25 ~~g~~vlV~G~G~vG~~~~~~ak~-----~Ga~vi~v~~~~~r~~~a~~~----ga~~~~~~~~~~~~~~~~~~~~~~~~   95 (170)
T d1e3ja2          25 QLGTTVLVIGAGPIGLVSVLAAKA-----YGAFVVCTARSPRRLEVAKNC----GADVTLVVDPAKEEESSIIERIRSAI   95 (170)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHT----TCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCCEEEEEcccccchhhHhhHhh-----hcccccccchHHHHHHHHHHc----CCcEEEeccccccccchhhhhhhccc
Confidence            688999999877 34444444433     357999999999999988763    3222221111       111111222


Q ss_pred             CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          113 AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      ...+|+|+-...                           ....+..+.++|+++|+++++..
T Consensus        96 g~g~D~vid~~g---------------------------~~~~~~~a~~~~~~~G~iv~~G~  130 (170)
T d1e3ja2          96 GDLPNVTIDCSG---------------------------NEKCITIGINITRTGGTLMLVGM  130 (170)
T ss_dssp             SSCCSEEEECSC---------------------------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred             ccCCceeeecCC---------------------------ChHHHHHHHHHHhcCCceEEEec
Confidence            356899987422                           24567888889999999998654


No 113
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=97.46  E-value=0.00022  Score=56.75  Aligned_cols=64  Identities=23%  Similarity=0.257  Sum_probs=51.1

Q ss_pred             cCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211           20 PCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH   93 (256)
Q Consensus        20 p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~   93 (256)
                      |..=...|++.++...    +.++..|||+.||+|..++++.++      +-+.+|+|++++.++.|++++...
T Consensus       189 p~~kP~~L~~~~I~~~----s~~gdiVLDpF~GSGTT~~Aa~~l------gR~~ig~El~~~y~~~a~~Ri~~~  252 (279)
T d1eg2a_         189 PTQKPAAVIERLVRAL----SHPGSTVLDFFAGSGVTARVAIQE------GRNSICTDAAPVFKEYYQKQLTFL  252 (279)
T ss_dssp             TTCCCHHHHHHHHHHH----SCTTCEEEETTCTTCHHHHHHHHH------TCEEEEEESSTHHHHHHHHHHHHC
T ss_pred             ccccchhHHHHHHHhh----cCCCCEEEecCCCCcHHHHHHHHh------CCeEEEEeCCHHHHHHHHHHHHHh
Confidence            3333466777777665    468999999999999988877665      338999999999999999998753


No 114
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Probab=97.38  E-value=0.00017  Score=53.90  Aligned_cols=97  Identities=20%  Similarity=0.225  Sum_probs=62.2

Q ss_pred             CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEE---Ecchhhchhhhc-CCC
Q 025211           41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLI---NTDIASGLEKRL-AGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~---~~d~~~~~~~~~-~~~  115 (256)
                      +++.+||=+|||. |..++.+++.++   . .+|+++|.+++..+.+++.    |.. .++   ..+..+...+.. ...
T Consensus        26 ~~g~~VlI~GaG~vGl~~~q~ak~~G---a-~~Vi~~d~~~~r~~~a~~l----Ga~-~~i~~~~~~~~~~v~~~t~g~G   96 (174)
T d1jqba2          26 EMGSSVVVIGIGAVGLMGIAGAKLRG---A-GRIIGVGSRPICVEAAKFY----GAT-DILNYKNGHIEDQVMKLTNGKG   96 (174)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHHTTT---C-SCEEEECCCHHHHHHHHHH----TCS-EEECGGGSCHHHHHHHHTTTSC
T ss_pred             CCCCEEEEEcCCcchhhhhhhhhccc---c-cccccccchhhhHHHHHhh----Ccc-ccccccchhHHHHHHHHhhccC
Confidence            6788999898875 566555555421   1 2799999999998888753    332 222   122222222222 245


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      +|+|+-.-.                           ....++.+.++++|+|+++++.
T Consensus        97 ~D~vid~~g---------------------------~~~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2          97 VDRVIMAGG---------------------------GSETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             EEEEEECSS---------------------------CTTHHHHHHHHEEEEEEEEECC
T ss_pred             cceEEEccC---------------------------CHHHHHHHHHHHhcCCEEEEEe
Confidence            999987432                           1245777788999999999854


No 115
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=97.28  E-value=0.00056  Score=50.77  Aligned_cols=97  Identities=19%  Similarity=0.167  Sum_probs=63.5

Q ss_pred             CCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhcCCCc
Q 025211           41 HHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRLAGLV  116 (256)
Q Consensus        41 ~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~f  116 (256)
                      +++.+||=+|||.- ...+.+++.+   + ...|+++|.+++.++.+++.    |.. .++..   |..+......++.+
T Consensus        27 ~~g~~VlI~G~G~iG~~~~~~ak~~---g-~~~v~~~~~~~~k~~~a~~~----Ga~-~~i~~~~~~~~~~i~~~t~gg~   97 (174)
T d1f8fa2          27 TPASSFVTWGAGAVGLSALLAAKVC---G-ASIIIAVDIVESRLELAKQL----GAT-HVINSKTQDPVAAIKEITDGGV   97 (174)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHH---T-CSEEEEEESCHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTSCE
T ss_pred             CCCCEEEEeCCCHHHhhhhhccccc---c-cceeeeeccHHHHHHHHHHc----CCe-EEEeCCCcCHHHHHHHHcCCCC
Confidence            68899999988632 2333333332   2 33788999999998888763    433 33322   33333333445689


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      |+|+-.-.                           ....++.+.++++++|+++++.
T Consensus        98 D~vid~~G---------------------------~~~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2          98 NFALESTG---------------------------SPEILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             EEEEECSC---------------------------CHHHHHHHHHTEEEEEEEEECC
T ss_pred             cEEEEcCC---------------------------cHHHHHHHHhcccCceEEEEEe
Confidence            99987422                           2466888899999999999854


No 116
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.23  E-value=0.00062  Score=50.18  Aligned_cols=97  Identities=16%  Similarity=0.090  Sum_probs=60.6

Q ss_pred             CCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-chhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT-DIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~fD~  118 (256)
                      +++.+|+-+|+| .|..++.+++.     .+++++++|.+++.++.+++.    |.+ .++.. +-.+.. ....+.+|+
T Consensus        26 ~~g~~vlI~GaG~vG~~a~q~ak~-----~G~~vi~~~~~~~k~~~a~~l----Ga~-~~i~~~~~~~~~-~~~~~~~d~   94 (168)
T d1piwa2          26 GPGKKVGIVGLGGIGSMGTLISKA-----MGAETYVISRSSRKREDAMKM----GAD-HYIATLEEGDWG-EKYFDTFDL   94 (168)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHH-----HTCEEEEEESSSTTHHHHHHH----TCS-EEEEGGGTSCHH-HHSCSCEEE
T ss_pred             CCCCEEEEECCCCcchhHHHHhhh-----ccccccccccchhHHHHhhcc----CCc-EEeeccchHHHH-Hhhhcccce
Confidence            689999999987 45555555544     257999999999988887653    433 23222 211221 223467999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ++..-.-.                         ....+..+.++|+++|+++++.
T Consensus        95 vi~~~~~~-------------------------~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2          95 IVVCASSL-------------------------TDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             EEECCSCS-------------------------TTCCTTTGGGGEEEEEEEEECC
T ss_pred             EEEEecCC-------------------------ccchHHHHHHHhhccceEEEec
Confidence            88732100                         0011445678999999999854


No 117
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=97.22  E-value=0.00085  Score=50.82  Aligned_cols=113  Identities=14%  Similarity=0.103  Sum_probs=66.6

Q ss_pred             CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhc-CCCc
Q 025211           41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRL-AGLV  116 (256)
Q Consensus        41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~-~~~f  116 (256)
                      +++.+||-+|||. |..+..+++.    .....|+++|.+++.++.|++.    |.+.  .....|+.+...+.. ...+
T Consensus        24 ~~G~tVlV~GaG~vGl~a~~~ak~----~ga~~Vi~~d~~~~rl~~a~~~----Ga~~~~~~~~~~~~~~i~~~t~g~g~   95 (195)
T d1kola2          24 GPGSTVYVAGAGPVGLAAAASARL----LGAAVVIVGDLNPARLAHAKAQ----GFEIADLSLDTPLHEQIAALLGEPEV   95 (195)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHH----TTCSEEEEEESCHHHHHHHHHT----TCEEEETTSSSCHHHHHHHHHSSSCE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHh----hcccceeeecccchhhHhhhhc----cccEEEeCCCcCHHHHHHHHhCCCCc
Confidence            6899999999987 5555555554    2345899999999999988764    3321  111223333322222 3468


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      |+++-.-..-....       ......+..     ....++.+.+.++|+|++.++-
T Consensus        96 D~vid~vG~~~~~~-------~~~~~~~~~-----~~~~l~~~~~~~r~gG~v~~~G  140 (195)
T d1kola2          96 DCAVDAVGFEARGH-------GHEGAKHEA-----PATVLNSLMQVTRVAGKIGIPG  140 (195)
T ss_dssp             EEEEECCCTTCBCS-------STTGGGSBC-----TTHHHHHHHHHEEEEEEEEECS
T ss_pred             EEEEECccccccCC-------cccceeecC-----cHHHHHHHHHHHhcCCEEEEee
Confidence            99986422110000       000000000     2367899999999999999864


No 118
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=97.07  E-value=0.00021  Score=53.58  Aligned_cols=96  Identities=16%  Similarity=0.200  Sum_probs=60.4

Q ss_pred             CCCCEEEEecccc-cHHHHHHHHHhcccCCCc-eEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhc---hhhh-
Q 025211           41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGV-QYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASG---LEKR-  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~-~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~---~~~~-  111 (256)
                      +++.+||-+|+|. |...+.+++.+     ++ +|+++|.+++.++.+++.    |.+ .++.   .+..+.   ..+. 
T Consensus        27 ~~G~~VlV~GaG~iG~~~~~~ak~~-----Ga~~Vi~~~~~~~~~~~a~~l----Ga~-~vi~~~~~~~~~~~~~i~~~~   96 (182)
T d1vj0a2          27 FAGKTVVIQGAGPLGLFGVVIARSL-----GAENVIVIAGSPNRLKLAEEI----GAD-LTLNRRETSVEERRKAIMDIT   96 (182)
T ss_dssp             CBTCEEEEECCSHHHHHHHHHHHHT-----TBSEEEEEESCHHHHHHHHHT----TCS-EEEETTTSCHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCccchhheeccccc-----ccccccccccccccccccccc----cce-EEEeccccchHHHHHHHHHhh
Confidence            5789999998873 45555555542     33 899999999999988653    332 2221   122221   1111 


Q ss_pred             cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          112 LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ....+|+|+-.-.                           ....++.+.+.|++||+++++.
T Consensus        97 ~~~g~Dvvid~vG---------------------------~~~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2          97 HGRGADFILEATG---------------------------DSRALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             TTSCEEEEEECSS---------------------------CTTHHHHHHHHEEEEEEEEECC
T ss_pred             CCCCceEEeecCC---------------------------chhHHHHHHHHhcCCCEEEEEe
Confidence            1345999986321                           1244677788999999998754


No 119
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.06  E-value=0.00094  Score=49.42  Aligned_cols=95  Identities=17%  Similarity=0.214  Sum_probs=63.2

Q ss_pred             CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhh-cCC
Q 025211           41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKR-LAG  114 (256)
Q Consensus        41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~-~~~  114 (256)
                      +++.+||-.|+  |.|..++.+++.     -++++++++.+++..+.+++    .|.+ .++.   .|+.+..... ...
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~-----~G~~vi~~~~~~~~~~~~~~----~Ga~-~vi~~~~~~~~~~i~~~t~~~   96 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARA-----YGLKILGTAGTEEGQKIVLQ----NGAH-EVFNHREVNYIDKIKKYVGEK   96 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHH----TTCS-EEEETTSTTHHHHHHHHHCTT
T ss_pred             CCCCEEEEEeccccccccccccccc-----cCcccccccccccccccccc----cCcc-cccccccccHHHHhhhhhccC
Confidence            58899999996  455666666665     25789999999887777654    4543 2322   2333332222 245


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .+|+|+...                            -...++...++|+++|+++.+-
T Consensus        97 g~d~v~d~~----------------------------g~~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2          97 GIDIIIEML----------------------------ANVNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             CEEEEEESC----------------------------HHHHHHHHHHHEEEEEEEEECC
T ss_pred             CceEEeecc----------------------------cHHHHHHHHhccCCCCEEEEEe
Confidence            699998741                            1345777888999999999853


No 120
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.06  E-value=0.00061  Score=50.36  Aligned_cols=99  Identities=14%  Similarity=0.093  Sum_probs=61.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhc---hhhhcCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASG---LEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~---~~~~~~~  114 (256)
                      +++.+|+=+|||...  +.+++.+...+ ..+|+++|.+++.++.|++.    |.+. ++..   +..+.   .......
T Consensus        25 ~~gd~VlI~G~G~iG--~~~~~~a~~~G-~~~Vi~~d~~~~rl~~a~~~----Ga~~-~~~~~~~~~~~~~~~~~~~~g~   96 (171)
T d1pl8a2          25 TLGHKVLVCGAGPIG--MVTLLVAKAMG-AAQVVVTDLSATRLSKAKEI----GADL-VLQISKESPQEIARKVEGQLGC   96 (171)
T ss_dssp             CTTCEEEEECCSHHH--HHHHHHHHHTT-CSEEEEEESCHHHHHHHHHT----TCSE-EEECSSCCHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCccH--HHHHHHHHHcC-CceEEeccCCHHHHHHHHHh----CCcc-cccccccccccccccccccCCC
Confidence            678999999886433  33333333222 23899999999999988753    4332 2221   21111   1111235


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      .+|+|+..-.                           ....++...+++++||+++++..
T Consensus        97 g~Dvvid~~G---------------------------~~~~~~~a~~~~~~gG~iv~~G~  129 (171)
T d1pl8a2          97 KPEVTIECTG---------------------------AEASIQAGIYATRSGGTLVLVGL  129 (171)
T ss_dssp             CCSEEEECSC---------------------------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred             CceEEEeccC---------------------------CchhHHHHHHHhcCCCEEEEEec
Confidence            7899987422                           24678888999999999998654


No 121
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=97.03  E-value=0.00052  Score=51.09  Aligned_cols=98  Identities=21%  Similarity=0.189  Sum_probs=65.7

Q ss_pred             CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---c--hhhchhhhcCC
Q 025211           41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---D--IASGLEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d--~~~~~~~~~~~  114 (256)
                      +++.+|+=+|||. |..++.+++.++    ...|+++|.+++..+.|++.    |.. .++..   |  ..........+
T Consensus        27 ~~G~~VlV~G~G~iGl~a~~~ak~~G----a~~Vi~~d~~~~r~~~a~~~----Ga~-~~i~~~~~~~~~~~~~~~~~~~   97 (174)
T d1e3ia2          27 TPGSTCAVFGLGCVGLSAIIGCKIAG----ASRIIAIDINGEKFPKAKAL----GAT-DCLNPRELDKPVQDVITELTAG   97 (174)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTT----CSEEEEECSCGGGHHHHHHT----TCS-EEECGGGCSSCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHhC----CceeeeeccchHHHHHHHHh----CCC-cccCCccchhhhhhhHhhhhcC
Confidence            6889999999987 777777777642    23799999999988887763    333 22221   1  11111122246


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEEEe
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLVTL  174 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  174 (256)
                      .+|+++-.-.                           ....+..+.+.+++| |+++++-.
T Consensus        98 G~d~vie~~G---------------------------~~~~~~~a~~~~~~g~G~~v~vG~  131 (174)
T d1e3ia2          98 GVDYSLDCAG---------------------------TAQTLKAAVDCTVLGWGSCTVVGA  131 (174)
T ss_dssp             CBSEEEESSC---------------------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             CCcEEEEecc---------------------------cchHHHHHHHHhhcCCeEEEecCC
Confidence            7999987421                           256788899999996 99998643


No 122
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=96.77  E-value=0.0022  Score=46.80  Aligned_cols=96  Identities=19%  Similarity=0.212  Sum_probs=57.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhchhhhcCCCcc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGLEKRLAGLVD  117 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~fD  117 (256)
                      +++.+|+=+|+|.  +++.+.+.++.  .+++|+++|.+++.++.+++    .|.+ .++..   |..+.......+.+|
T Consensus        26 ~~g~~VlV~GaG~--vG~~~~~~ak~--~G~~Vi~~~~~~~~~~~a~~----~Ga~-~~i~~~~~~~~~~~~~~~~g~~~   96 (166)
T d1llua2          26 RPGQWVAISGIGG--LGHVAVQYARA--MGLHVAAIDIDDAKLELARK----LGAS-LTVNARQEDPVEAIQRDIGGAHG   96 (166)
T ss_dssp             CTTCEEEEECCSH--HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH----TTCS-EEEETTTSCHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEeeccc--cHHHHHHHHHH--cCCccceecchhhHHHhhhc----cCcc-ccccccchhHHHHHHHhhcCCcc
Confidence            6788999988753  44444443332  25799999999999888765    3433 23322   222222222223344


Q ss_pred             EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .|++..                            -...+..+.++|+++|+++++.
T Consensus        97 ~i~~~~----------------------------~~~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2          97 VLVTAV----------------------------SNSAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             EEECCS----------------------------CHHHHHHHHTTEEEEEEEEECC
T ss_pred             cccccc----------------------------cchHHHHHHHHhcCCcEEEEEE
Confidence            444421                            1355778889999999999854


No 123
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}
Probab=96.71  E-value=0.003  Score=46.46  Aligned_cols=98  Identities=15%  Similarity=0.160  Sum_probs=61.8

Q ss_pred             CCCCEEEEecccccH-HHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc---hhhchhhhcCCCc
Q 025211           41 HHPVLCMEVGCGSGY-VITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD---IASGLEKRLAGLV  116 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~-~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~f  116 (256)
                      +++.+||=+|+|... ..+.+++..   + ...|+++|.+++.++.+++.    +.. .++..+   ............+
T Consensus        31 ~~g~~vli~GaG~vG~~~~~~a~~~---g-~~~vv~~~~~~~k~~~~~~~----ga~-~~i~~~~~~~~~~~~~~~~~g~  101 (172)
T d1h2ba2          31 YPGAYVAIVGVGGLGHIAVQLLKVM---T-PATVIALDVKEEKLKLAERL----GAD-HVVDARRDPVKQVMELTRGRGV  101 (172)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHH---C-CCEEEEEESSHHHHHHHHHT----TCS-EEEETTSCHHHHHHHHTTTCCE
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHhh---c-CcccccccchhHHHHHHhhc----ccc-eeecCcccHHHHHHHhhCCCCc
Confidence            578999999986443 333444432   2 34899999999988887753    322 333222   1112211123569


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      |+|+-.-.                           -...++...++|+++|+++++-.
T Consensus       102 d~vid~~g---------------------------~~~~~~~a~~~l~~~G~iv~~G~  132 (172)
T d1h2ba2         102 NVAMDFVG---------------------------SQATVDYTPYLLGRMGRLIIVGY  132 (172)
T ss_dssp             EEEEESSC---------------------------CHHHHHHGGGGEEEEEEEEECCC
T ss_pred             eEEEEecC---------------------------cchHHHHHHHHHhCCCEEEEEeC
Confidence            99987532                           24568888999999999998653


No 124
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=96.57  E-value=0.0025  Score=46.72  Aligned_cols=98  Identities=22%  Similarity=0.272  Sum_probs=62.9

Q ss_pred             cCCCCEEEEeccc--ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc---hhhchhhh-cC
Q 025211           40 EHHPVLCMEVGCG--SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD---IASGLEKR-LA  113 (256)
Q Consensus        40 ~~~~~~VLDlGcG--~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d---~~~~~~~~-~~  113 (256)
                      .+++.+||=+|++  .|..++.+++..    ....|+++|.+++..+.+++.    |.+ .++..+   ..+..... ..
T Consensus        25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~----g~~~V~~~~~~~~~~~~~~~~----Ga~-~~i~~~~~~~~~~~~~~~~~   95 (170)
T d1jvba2          25 LDPTKTLLVVGAGGGLGTMAVQIAKAV----SGATIIGVDVREEAVEAAKRA----GAD-YVINASMQDPLAEIRRITES   95 (170)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHH----TCCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTT
T ss_pred             CCCCCEEEEEeccccceeeeeeccccc----ccccccccccchhhHHHHHHc----CCc-eeeccCCcCHHHHHHHHhhc
Confidence            3688999999974  344444444442    235899999999988888763    433 222222   22222221 23


Q ss_pred             CCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          114 GLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       114 ~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      +.||+|+..-.                           -...++.+.+.++|+|+++++.
T Consensus        96 ~~~d~vid~~g---------------------------~~~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2          96 KGVDAVIDLNN---------------------------SEKTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             SCEEEEEESCC---------------------------CHHHHTTGGGGEEEEEEEEECC
T ss_pred             ccchhhhcccc---------------------------cchHHHhhhhhcccCCEEEEec
Confidence            56999987422                           2466788889999999999864


No 125
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=96.40  E-value=0.013  Score=42.62  Aligned_cols=92  Identities=20%  Similarity=0.153  Sum_probs=60.1

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCC
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPP  124 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP  124 (256)
                      +|+=+||  |.++-.+++.+.+.+...+|+|+|.+++.++.+++.    +...... .+....    .....|+|+...|
T Consensus         3 ~I~IIG~--G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~----~~~~~~~-~~~~~~----~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEGT-TSIAKV----EDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEEE-SCGGGG----GGTCCSEEEECSC
T ss_pred             EEEEEcc--CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh----hcchhhh-hhhhhh----hccccccccccCC
Confidence            4666776  566666777776666677999999999999887764    2211221 122111    1246899988655


Q ss_pred             CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          125 YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                      -                        .....++..+.+.++++-.+.-
T Consensus        72 ~------------------------~~~~~vl~~l~~~~~~~~ii~d   94 (171)
T d2g5ca2          72 V------------------------RTFREIAKKLSYILSEDATVTD   94 (171)
T ss_dssp             H------------------------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred             c------------------------hhhhhhhhhhhccccccccccc
Confidence            1                        2356778888888998876664


No 126
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.30  E-value=0.0075  Score=43.76  Aligned_cols=97  Identities=16%  Similarity=0.174  Sum_probs=58.6

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      +++.+||=.|+|+-.  +.+.+.+.  ..+++|+++|.+++.++.+++    .|.+.  .....|.........++.+|+
T Consensus        26 ~~g~~vlv~G~G~iG--~~a~~~a~--~~g~~v~~~~~~~~r~~~~k~----~Ga~~~~~~~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          26 KPGEWVAIYGIGGLG--HVAVQYAK--AMGLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             CTTCEEEEECCSTTH--HHHHHHHH--HTTCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCCEEEEeecccch--hhhhHHHh--cCCCeEeccCCCHHHhhhhhh----cCcceecccccchhhhhcccccCCCceE
Confidence            688999998886543  22333332  235689999999999888765    34332  111123333333322344444


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      | .+.+                           -...+....+.|+++|+++++.
T Consensus        98 v-~~~~---------------------------~~~~~~~a~~~l~~~G~i~~~g  124 (168)
T d1rjwa2          98 V-VTAV---------------------------SKPAFQSAYNSIRRGGACVLVG  124 (168)
T ss_dssp             E-ESSC---------------------------CHHHHHHHHHHEEEEEEEEECC
T ss_pred             E-eecC---------------------------CHHHHHHHHHHhccCCceEecc
Confidence            4 4432                           2456788888999999999854


No 127
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=95.82  E-value=0.0077  Score=44.10  Aligned_cols=97  Identities=21%  Similarity=0.161  Sum_probs=61.0

Q ss_pred             CCCCEEEEeccc-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-----chhhchhhhcCC
Q 025211           41 HHPVLCMEVGCG-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT-----DIASGLEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-----d~~~~~~~~~~~  114 (256)
                      +++.+||=.||| .|.+++.+++.++    ...|+++|.+++..+.+++.    |.+. ++..     +..........+
T Consensus        27 ~~G~tVlI~GaGGvG~~aiq~ak~~G----~~~vi~~~~~~~k~~~ak~l----Ga~~-~i~~~~~~~~~~~~~~~~~~~   97 (176)
T d2fzwa2          27 EPGSVCAVFGLGGVGLAVIMGCKVAG----ASRIIGVDINKDKFARAKEF----GATE-CINPQDFSKPIQEVLIEMTDG   97 (176)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHT----CSEEEEECSCGGGHHHHHHH----TCSE-EECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCCEEEEecchhHHHHHHHHHHHHh----cCceEEEcccHHHHHHHHHh----CCcE-EEeCCchhhHHHHHHHHHcCC
Confidence            688999999886 2345555555432    34899999999988887753    3332 2211     122222222346


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .+|+|+-...                           ....++.+..++++||.++++.
T Consensus        98 g~D~vid~~G---------------------------~~~~~~~~~~~~~~g~~~~~v~  129 (176)
T d2fzwa2          98 GVDYSFECIG---------------------------NVKVMRAALEACHKGWGVSVVV  129 (176)
T ss_dssp             CBSEEEECSC---------------------------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred             CCcEeeecCC---------------------------CHHHHHHHHHhhcCCceeEEEE
Confidence            7999987421                           2466788888999998776643


No 128
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=95.76  E-value=0.091  Score=40.62  Aligned_cols=87  Identities=15%  Similarity=0.167  Sum_probs=64.1

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h------h
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K------R  111 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~  111 (256)
                      ..+++.+|=.|.+.| ++.++++.|.+.  +++|+.+|.+++.++.+.+.+...+.+...+..|+.+...  .      .
T Consensus         7 ~lenKvalITGas~G-IG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           7 CGENKVALVTGAGRG-IGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCSSCEEEEESTTSH-HHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCH-HHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            346788888886655 788888888754  6799999999999998888887766666778888765421  0      1


Q ss_pred             cCCCccEEEECCCCCCCC
Q 025211          112 LAGLVDVMVVNPPYVPTP  129 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~~  129 (256)
                      .-+++|++|.|.......
T Consensus        84 ~~g~iDilvnnag~~~~~  101 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDN  101 (251)
T ss_dssp             HCSCCCEEEECCCCCCCC
T ss_pred             hcCCceeeeecccccccc
Confidence            137899999987655433


No 129
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.66  E-value=0.02  Score=42.06  Aligned_cols=95  Identities=17%  Similarity=0.113  Sum_probs=60.1

Q ss_pred             CCCCEEEEec--ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceE--EEcchhhchhhh-cCCC
Q 025211           41 HHPVLCMEVG--CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADL--INTDIASGLEKR-LAGL  115 (256)
Q Consensus        41 ~~~~~VLDlG--cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~--~~~d~~~~~~~~-~~~~  115 (256)
                      +++++||=.|  .|.|.+++.+++.+     +++++++.-+++..+.+++    .|.+.-+  ...|+.+...+. ....
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~-----g~~vi~~~~~~~~~~~l~~----~Ga~~vi~~~~~~~~~~v~~~t~~~g   94 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMI-----GARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELTDGYG   94 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHT----TCCSEEEETTCSTHHHHHHHHTTTCC
T ss_pred             CCCCEEEEECCCCCcccccchhhccc-----cccceeeeccccccccccc----ccccccccCCccCHHHHHHHHhCCCC
Confidence            5788999876  34556666666553     5689998888877776654    4544211  122333333332 2357


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      ||+|+....                            ...++.+.++|+++|+++.+
T Consensus        95 ~d~v~d~~g----------------------------~~~~~~~~~~l~~~G~~v~~  123 (183)
T d1pqwa_          95 VDVVLNSLA----------------------------GEAIQRGVQILAPGGRFIEL  123 (183)
T ss_dssp             EEEEEECCC----------------------------THHHHHHHHTEEEEEEEEEC
T ss_pred             EEEEEeccc----------------------------chHHHHHHHHhcCCCEEEEE
Confidence            999998421                            23467778899999999985


No 130
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=95.66  E-value=0.015  Score=42.75  Aligned_cols=45  Identities=16%  Similarity=0.144  Sum_probs=33.4

Q ss_pred             CCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211           41 HHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT   89 (256)
Q Consensus        41 ~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~   89 (256)
                      +++.+|+=.|||.. ..++.+++.    ....+|+++|.+++.++.|++.
T Consensus        28 ~~g~tVlI~G~GgvGl~ai~~ak~----~G~~~Vi~vd~~~~kl~~Ak~~   73 (176)
T d1d1ta2          28 KPGSTCVVFGLGGVGLSVIMGCKS----AGASRIIGIDLNKDKFEKAMAV   73 (176)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHH----TTCSEEEEECSCGGGHHHHHHH
T ss_pred             CCCCEEEEECCCchhHHHHHHHHH----cCCceEEEecCcHHHHHHHHhc
Confidence            68899999998743 344444444    2235899999999999998875


No 131
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.65  E-value=0.12  Score=39.97  Aligned_cols=84  Identities=14%  Similarity=0.141  Sum_probs=60.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchh--h----h--
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLE--K----R--  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~--~----~--  111 (256)
                      +++.||=.|+++| ++.++++.|.+.  +++|+.++.+++.++.+.+.+...+.+.  .++..|+.+.-.  .    .  
T Consensus         9 k~Kv~lITGas~G-IG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           9 RDRLALVTGASGG-IGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            6788999997755 566777777754  6799999999999998888887766543  667888765421  0    0  


Q ss_pred             cCCCccEEEECCCCCCC
Q 025211          112 LAGLVDVMVVNPPYVPT  128 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~  128 (256)
                      .-+++|++|.|..+...
T Consensus        86 ~~g~iD~lVnnAg~~~~  102 (257)
T d1xg5a_          86 QHSGVDICINNAGLARP  102 (257)
T ss_dssp             HHCCCSEEEECCCCCCC
T ss_pred             hcCCCCEEEecccccCC
Confidence            12679999998766543


No 132
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}
Probab=95.62  E-value=0.01  Score=43.53  Aligned_cols=92  Identities=15%  Similarity=0.183  Sum_probs=57.5

Q ss_pred             CCCCEEEEecc-c-ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccE
Q 025211           41 HHPVLCMEVGC-G-SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        41 ~~~~~VLDlGc-G-~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      +++++||=.|. | .|...+.+++.     -+++|++++.+++..+.+++    .|.+.-+-..+......  ....+|+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~-----~G~~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~--~~~g~D~   94 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARA-----MGLRVLAAASRPEKLALPLA----LGAEEAATYAEVPERAK--AWGGLDL   94 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSGGGSHHHHH----TTCSEEEEGGGHHHHHH--HTTSEEE
T ss_pred             CCCCEEEEEeccccchhhhhhhhcc-----cccccccccccccccccccc----cccceeeehhhhhhhhh--ccccccc
Confidence            68899998874 3 35666666665     35799999999887777654    45443221222221111  2356999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      |+-.-                     |        ..+..+.+.|+++|+++++
T Consensus        95 v~d~~---------------------G--------~~~~~~~~~l~~~G~~v~~  119 (171)
T d1iz0a2          95 VLEVR---------------------G--------KEVEESLGLLAHGGRLVYI  119 (171)
T ss_dssp             EEECS---------------------C--------TTHHHHHTTEEEEEEEEEC
T ss_pred             ccccc---------------------c--------hhHHHHHHHHhcCCcEEEE
Confidence            87520                     0        1146677899999999875


No 133
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=95.56  E-value=0.019  Score=42.05  Aligned_cols=95  Identities=17%  Similarity=0.149  Sum_probs=62.5

Q ss_pred             CCCCEEEEeccc--ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cchhhchhhhc-CC
Q 025211           41 HHPVLCMEVGCG--SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TDIASGLEKRL-AG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG--~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~-~~  114 (256)
                      +++++||=.|+|  .|...+.+++..     +++|++++.+++..+.+++.    |.+ .++.   .|+.+...+.- ..
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~-----Ga~Vi~~~~s~~k~~~~~~l----Ga~-~vi~~~~~d~~~~v~~~t~g~   96 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKAL-----GAKLIGTVGTAQKAQSALKA----GAW-QVINYREEDLVERLKEITGGK   96 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTC
T ss_pred             CCCCEEEEEccccccchHHHHHHHHh-----CCeEeecccchHHHHHHHhc----CCe-EEEECCCCCHHHHHHHHhCCC
Confidence            578899888655  566777777653     57999999999998887653    433 3332   23333333222 35


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .+|+|+....                            ...+......|+++|++++..
T Consensus        97 g~d~v~d~~g----------------------------~~~~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2          97 KVRVVYDSVG----------------------------RDTWERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             CEEEEEECSC----------------------------GGGHHHHHHTEEEEEEEEECC
T ss_pred             CeEEEEeCcc----------------------------HHHHHHHHHHHhcCCeeeecc
Confidence            6899877421                            123667788999999987744


No 134
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}
Probab=95.42  E-value=0.012  Score=43.34  Aligned_cols=73  Identities=16%  Similarity=0.138  Sum_probs=44.6

Q ss_pred             CCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---cc--hhhchhhhcCC
Q 025211           41 HHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---TD--IASGLEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---~d--~~~~~~~~~~~  114 (256)
                      +++.+||=+|||.. ..++.+++.++    ...|+++|.+++.++.+++    .|.+ .++.   .|  ..+.......+
T Consensus        26 ~~G~~VlV~GaGgvGl~a~~~ak~~G----~~~Vi~~d~~~~kl~~a~~----lGa~-~~i~~~~~d~~~~~~~~~~~~~   96 (174)
T d1p0fa2          26 TPGSTCAVFGLGGVGFSAIVGCKAAG----ASRIIGVGTHKDKFPKAIE----LGAT-ECLNPKDYDKPIYEVICEKTNG   96 (174)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHT----CSEEEEECSCGGGHHHHHH----TTCS-EEECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHcC----CceeeccCChHHHHHHHHH----cCCc-EEEcCCCchhHHHHHHHHhcCC
Confidence            68899999999743 34444444432    3489999999999998875    3433 2222   22  12222222245


Q ss_pred             CccEEEEC
Q 025211          115 LVDVMVVN  122 (256)
Q Consensus       115 ~fD~Ii~n  122 (256)
                      .+|+++-.
T Consensus        97 G~d~vid~  104 (174)
T d1p0fa2          97 GVDYAVEC  104 (174)
T ss_dssp             CBSEEEEC
T ss_pred             CCcEEEEc
Confidence            69999874


No 135
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}
Probab=95.42  E-value=0.014  Score=42.40  Aligned_cols=96  Identities=19%  Similarity=0.169  Sum_probs=58.9

Q ss_pred             CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      +++.+|+=+|+|. |.+++.+++.     -+++++++|.+++..+.+++    .|.+ .++...-.+.. ......+|++
T Consensus        29 ~~G~~VlI~GaG~vG~~a~qlak~-----~Ga~~i~~~~~~~~~~~a~~----lGad-~~i~~~~~~~~-~~~~~~~D~v   97 (168)
T d1uufa2          29 GPGKKVGVVGIGGLGHMGIKLAHA-----MGAHVVAFTTSEAKREAAKA----LGAD-EVVNSRNADEM-AAHLKSFDFI   97 (168)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHH----HTCS-EEEETTCHHHH-HTTTTCEEEE
T ss_pred             CCCCEEEEeccchHHHHHHHHhhc-----ccccchhhccchhHHHHHhc----cCCc-EEEECchhhHH-HHhcCCCcee
Confidence            6889999998863 4444444443     25688899999888777664    3433 23322211111 1123579999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      +..-.                    +       ...+..+.++|+++|+++++..
T Consensus        98 id~~g--------------------~-------~~~~~~~~~~l~~~G~iv~~G~  125 (168)
T d1uufa2          98 LNTVA--------------------A-------PHNLDDFTTLLKRDGTMTLVGA  125 (168)
T ss_dssp             EECCS--------------------S-------CCCHHHHHTTEEEEEEEEECCC
T ss_pred             eeeee--------------------c-------chhHHHHHHHHhcCCEEEEecc
Confidence            87321                    0       1226667789999999998643


No 136
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}
Probab=95.29  E-value=0.014  Score=42.80  Aligned_cols=97  Identities=16%  Similarity=0.077  Sum_probs=57.9

Q ss_pred             CCCCEEEEecccccH-HHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc----hhhchhhhcCCC
Q 025211           41 HHPVLCMEVGCGSGY-VITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD----IASGLEKRLAGL  115 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~-~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d----~~~~~~~~~~~~  115 (256)
                      +++.+||=+|+|.+. ..+.+++.    .....|+++|.+++..+.+++.    +....+...+    ..........+.
T Consensus        27 k~GdtVlV~GaGG~G~~~~~~~~~----~g~~~Vi~~~~~~~k~~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G   98 (176)
T d2jhfa2          27 TQGSTCAVFGLGGVGLSVIMGCKA----AGAARIIGVDINKDKFAKAKEV----GATECVNPQDYKKPIQEVLTEMSNGG   98 (176)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHH----TTCSEEEEECSCGGGHHHHHHT----TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHH----cCCceEEeecCcHHHHHHHHHh----CCeeEEecCCchhHHHHHHHHHhcCC
Confidence            688999999997443 33333333    3346999999999998887664    3332221112    111112223467


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccC-eEEEEE
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKR-GWLYLV  172 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  172 (256)
                      +|+++-...                           ....++.+...++.+ |.+++.
T Consensus        99 ~D~vid~~G---------------------------~~~~~~~a~~~~~~~~g~~~~~  129 (176)
T d2jhfa2          99 VDFSFEVIG---------------------------RLDTMVTALSCCQEAYGVSVIV  129 (176)
T ss_dssp             BSEEEECSC---------------------------CHHHHHHHHHHBCTTTCEEEEC
T ss_pred             CCEEEecCC---------------------------chhHHHHHHHHHhcCCcceEEe
Confidence            999987432                           245567777788886 555553


No 137
>d2dpma_ c.66.1.28 (A:) DNA methylase DpnM {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.22  E-value=0.16  Score=39.53  Aligned_cols=48  Identities=19%  Similarity=0.146  Sum_probs=34.6

Q ss_pred             HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHH
Q 025211           25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVE   84 (256)
Q Consensus        25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~   84 (256)
                      ..++.+|.+.++    ....+.+|+.||+|.+.+.+.       +. .++.-|+++..+.
T Consensus        13 ~~l~~~i~~~~p----~~~~~yvEpF~Gggav~~~~~-------~~-~~viND~n~~lin   60 (275)
T d2dpma_          13 RQLLPVIRELIP----KTYNRYFEPFVGGGALFFDLA-------PK-DAVINDFNAELIN   60 (275)
T ss_dssp             GGGHHHHHHHSC----SSCSCEEETTCTTCHHHHHHC-------CS-EEEEEESCHHHHH
T ss_pred             HHHHHHHHHhcC----cccCEEEeeCCCHHHHHhhhc-------cC-cEEEEeCCHHHHH
Confidence            446677777764    346789999999999865431       22 6788999988653


No 138
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}
Probab=95.12  E-value=0.041  Score=39.97  Aligned_cols=72  Identities=19%  Similarity=0.205  Sum_probs=46.8

Q ss_pred             CCCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEE
Q 025211           41 HHPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      -++.+|+=+|+|. |..++..+..+     ++.|+++|.+++.++..+.....+   .+....+-.......  ...|+|
T Consensus        30 v~pa~V~ViGaGvaG~~A~~~A~~l-----GA~V~~~D~~~~~l~~l~~~~~~~---~~~~~~~~~~l~~~~--~~aDiv   99 (168)
T d1pjca1          30 VKPGKVVILGGGVVGTEAAKMAVGL-----GAQVQIFDINVERLSYLETLFGSR---VELLYSNSAEIETAV--AEADLL   99 (168)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHGGG---SEEEECCHHHHHHHH--HTCSEE
T ss_pred             CCCcEEEEECCChHHHHHHHHHhhC-----CCEEEEEeCcHHHHHHHHHhhccc---ceeehhhhhhHHHhh--ccCcEE
Confidence            3679999999995 55666666654     579999999999988776654321   233333322221111  468999


Q ss_pred             EEC
Q 025211          120 VVN  122 (256)
Q Consensus       120 i~n  122 (256)
                      |..
T Consensus       100 I~a  102 (168)
T d1pjca1         100 IGA  102 (168)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            984


No 139
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=95.07  E-value=0.14  Score=39.65  Aligned_cols=83  Identities=22%  Similarity=0.208  Sum_probs=60.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++++|=-|.+ +.++.++++.+.++  +++|+.+|.+++.++.+.+.+...+-+...+..|+.+...  ..      .-
T Consensus        10 ~gK~alITGas-~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          10 DGKCAIITGAG-AGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTT-SHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            67888877755 45677778877644  6799999999999998888888777666778888765421  00      12


Q ss_pred             CCccEEEECCCCCC
Q 025211          114 GLVDVMVVNPPYVP  127 (256)
Q Consensus       114 ~~fD~Ii~npP~~~  127 (256)
                      +++|+++.|.-...
T Consensus        87 g~iDilvnnAG~~~  100 (255)
T d1fmca_          87 GKVDILVNNAGGGG  100 (255)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEeeeCCcCCC
Confidence            68999999876543


No 140
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.07  E-value=0.1  Score=38.30  Aligned_cols=97  Identities=15%  Similarity=0.149  Sum_probs=60.6

Q ss_pred             CCCCEEEEec--ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc--eEEEcchhhchhhhcCCCc
Q 025211           41 HHPVLCMEVG--CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA--DLINTDIASGLEKRLAGLV  116 (256)
Q Consensus        41 ~~~~~VLDlG--cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~f  116 (256)
                      +.+.+||=.|  .|.|.+++.+++.++    ...|+++..+++....+.+   ..+.+.  +....++.+......+..+
T Consensus        29 G~~etVLI~gaaGgVG~~aiQlak~~G----a~~vi~~~~~~e~~~~l~~---~~gad~vi~~~~~~~~~~~~~~~~~Gv  101 (187)
T d1vj1a2          29 GSNQTMVVSGAAGACGSLAGQIGHLLG----CSRVVGICGTQEKCLFLTS---ELGFDAAVNYKTGNVAEQLREACPGGV  101 (187)
T ss_dssp             TSCCEEEESSTTSTTGGGHHHHHHHTT----CSEEEEEESSHHHHHHHHH---HSCCSEEEETTSSCHHHHHHHHCTTCE
T ss_pred             CCCCEEEEECCCchhhHHHHHHHHHcC----CcceecccchHHHHhhhhh---cccceEEeeccchhHHHHHHHHhccCc
Confidence            3447888876  467889888888743    2367777777665544332   234332  2222234444433345679


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      |+|+-.-                        +    ...+....+.|+++|+++.+
T Consensus       102 Dvv~D~v------------------------G----g~~~~~~~~~l~~~G~iv~~  129 (187)
T d1vj1a2         102 DVYFDNV------------------------G----GDISNTVISQMNENSHIILC  129 (187)
T ss_dssp             EEEEESS------------------------C----HHHHHHHHTTEEEEEEEEEC
T ss_pred             eEEEecC------------------------C----chhHHHHhhhccccccEEEe
Confidence            9998631                        1    34577888999999999874


No 141
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=94.98  E-value=0.046  Score=44.98  Aligned_cols=67  Identities=18%  Similarity=0.140  Sum_probs=43.5

Q ss_pred             hHHHHHHHH----HhhcccccCCCCEEEEecccccHHHHHHHHHhccc---CCCceEEEEeCCHHHHHHHHHHH
Q 025211           24 SFALVDALL----ADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQE---VPGVQYIATDINPYAVEVTRKTL   90 (256)
Q Consensus        24 ~~~l~~~l~----~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~---~~~~~v~giD~~~~~i~~a~~~~   90 (256)
                      +.++.+.+.    ..+......+...|+|+|+|+|.++..+...+...   .....++-+|.|+...+.-++++
T Consensus        57 s~~Fg~~ia~~~~~~~~~~~~~~~~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~l  130 (365)
T d1zkda1          57 SQMFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL  130 (365)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCccceEEecCCcccHHHHhhhhhhcccccccccceEEEeccchhHHHHHHHHh
Confidence            455555443    33332222345689999999999987777665421   12457999999998776655544


No 142
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=94.78  E-value=0.18  Score=35.95  Aligned_cols=87  Identities=22%  Similarity=0.151  Sum_probs=54.7

Q ss_pred             EEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCC
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPY  125 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~  125 (256)
                      |.=+|+  |.++-.+++.+.+.  +.+|++.|.+++.++.+++.    +.- .....+. +..     ...|+|+..-|.
T Consensus         3 I~iIG~--G~mG~~lA~~l~~~--g~~V~~~d~~~~~~~~a~~~----~~~-~~~~~~~-~~~-----~~~DiIilavp~   67 (165)
T d2f1ka2           3 IGVVGL--GLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVER----QLV-DEAGQDL-SLL-----QTAKIIFLCTPI   67 (165)
T ss_dssp             EEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----TSC-SEEESCG-GGG-----TTCSEEEECSCH
T ss_pred             EEEEee--cHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHh----hcc-ceeeeec-ccc-----cccccccccCcH
Confidence            444544  66666666666543  56899999999988876542    221 1111222 211     468999975441


Q ss_pred             CCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEE
Q 025211          126 VPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYL  171 (256)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~  171 (256)
                                              .....+++++...|+++-.++-
T Consensus        68 ------------------------~~~~~vl~~l~~~l~~~~iv~~   89 (165)
T d2f1ka2          68 ------------------------QLILPTLEKLIPHLSPTAIVTD   89 (165)
T ss_dssp             ------------------------HHHHHHHHHHGGGSCTTCEEEE
T ss_pred             ------------------------hhhhhhhhhhhhhcccccceee
Confidence                                    2367888999998888887654


No 143
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=94.62  E-value=0.055  Score=37.43  Aligned_cols=65  Identities=23%  Similarity=0.204  Sum_probs=46.9

Q ss_pred             ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEEC
Q 025211           51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVVN  122 (256)
Q Consensus        51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~n  122 (256)
                      ||.|.++..+++.|.+.  +..|+.+|.+++.++.+++.+     ...++.+|..+..  ....-...|.+++-
T Consensus         6 ~G~G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           6 AGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             ECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             ECCCHHHHHHHHHHHHC--CCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcChhhhhhhccc
Confidence            56688888899888643  568999999999988765531     3378889877653  22223578999883


No 144
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}
Probab=94.45  E-value=0.038  Score=40.56  Aligned_cols=94  Identities=12%  Similarity=0.108  Sum_probs=61.4

Q ss_pred             CCCCEEEEecccc--cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc---hhhc-hhhhcCC
Q 025211           41 HHPVLCMEVGCGS--GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD---IASG-LEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~--G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d---~~~~-~~~~~~~  114 (256)
                      +++.+||=.|++.  |..++.+++.     -+++|+++.-+++..+.+++.    +.+ .++.-+   ..+. .......
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~-----~Ga~vi~~~~~~~~~~~~~~~----Ga~-~vi~~~~~~~~~~~~~~~~~~   97 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKL-----KGCKVVGAAGSDEKIAYLKQI----GFD-AAFNYKTVNSLEEALKKASPD   97 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHT----TCS-EEEETTSCSCHHHHHHHHCTT
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHc-----cCCEEEEeCCCHHHHHHHHhh----hhh-hhcccccccHHHHHHHHhhcC
Confidence            5789999777754  4566666665     357999999999887776653    433 222222   1111 1122345


Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                      .+|+|+-.-.                            ...++.+.++|+++|+++++
T Consensus        98 Gvd~v~D~vG----------------------------~~~~~~~~~~l~~~G~~v~~  127 (182)
T d1v3va2          98 GYDCYFDNVG----------------------------GEFLNTVLSQMKDFGKIAIC  127 (182)
T ss_dssp             CEEEEEESSC----------------------------HHHHHHHGGGEEEEEEEEEC
T ss_pred             CCceeEEecC----------------------------chhhhhhhhhccCCCeEEee
Confidence            6999987311                            35678889999999999985


No 145
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}
Probab=94.23  E-value=0.075  Score=44.15  Aligned_cols=53  Identities=8%  Similarity=0.008  Sum_probs=43.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNV   95 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~   95 (256)
                      .++..++|+|+-.|..+..++....  ....+|+++|.++..++..++|+..+..
T Consensus       211 ~kn~vfIDVGAniG~~s~~f~~~~~--~~~~kV~aFEP~p~n~~~LkkNi~~n~~  263 (395)
T d2py6a1         211 SDSEKMVDCGASIGESLAGLIGVTK--GKFERVWMIEPDRINLQTLQNVLRRYTD  263 (395)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHHHT--SCCSEEEEECCCHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEECCcCCCHHHHHHHHhcC--CCCCEEEEEeCCHHHHHHHHHHHHhccc
Confidence            4678999999999998877776643  2345899999999999999999988764


No 146
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=94.13  E-value=0.083  Score=36.38  Aligned_cols=64  Identities=19%  Similarity=0.134  Sum_probs=44.1

Q ss_pred             ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hhcCCCccEEEEC
Q 025211           51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KRLAGLVDVMVVN  122 (256)
Q Consensus        51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~fD~Ii~n  122 (256)
                      ||.|.++..+++.|.+.  +..|+.+|.+++.++.++..      ...++.+|..+...  ...-...|.+++.
T Consensus         6 iG~G~~G~~la~~L~~~--g~~vvvid~d~~~~~~~~~~------~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           6 IGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             ECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHHTTTT------CSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             ECCCHHHHHHHHHHHHC--CCeEEEecCcHHHHHHHHHh------CCcceeeecccchhhhccCCccccEEEEE
Confidence            47788888899988754  55899999999998876431      12677788765421  1112467887774


No 147
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}
Probab=94.08  E-value=0.45  Score=36.64  Aligned_cols=85  Identities=13%  Similarity=0.107  Sum_probs=61.1

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh---------hh
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE---------KR  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~---------~~  111 (256)
                      -+++++|=-|.+. .++.++++.+.++  +++|+..|.+++.++.+.+.+...+....++..|+.+...         ..
T Consensus         6 L~GK~alITGas~-GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           6 LEGCTALVTGGSR-GIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             CTTCEEEEESCSS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCC-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            3688889888664 4566777777654  6799999999999988888887777666777888754321         11


Q ss_pred             cCCCccEEEECCCCCCC
Q 025211          112 LAGLVDVMVVNPPYVPT  128 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~  128 (256)
                      ...+.|++|.|.-+...
T Consensus        83 ~~~~idilvnnAG~~~~   99 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIY   99 (259)
T ss_dssp             TTTCCCEEEECCCCCCC
T ss_pred             hCCCceEEEECCceecc
Confidence            23479999998765443


No 148
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.06  E-value=0.032  Score=41.00  Aligned_cols=97  Identities=13%  Similarity=0.025  Sum_probs=59.8

Q ss_pred             CCCCEEEEeccc--ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc-hhhchhhhcCCCcc
Q 025211           41 HHPVLCMEVGCG--SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD-IASGLEKRLAGLVD  117 (256)
Q Consensus        41 ~~~~~VLDlGcG--~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~fD  117 (256)
                      .++.+||=-|.+  .|.+++.+++.+     +++|+++--+++..+.+++    .|.+..+-..+ ..+.......+.+|
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~-----Ga~Viat~~s~~k~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~gvD  100 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKR-----GYTVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLDKQRWA  100 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHT-----TCCEEEEESCTTCHHHHHH----TTCSEEEECC---------CCSCCEE
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHc-----CCceEEecCchHHHHHHHh----cccceeeecchhHHHHHHHhhccCcC
Confidence            357788888754  456777777653     6789999988888887764    34432111111 11111122346799


Q ss_pred             EEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          118 VMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       118 ~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      +|+-+..                            ...+....+.|++||+++.+..
T Consensus       101 ~vid~vg----------------------------g~~~~~~l~~l~~~Griv~~G~  129 (176)
T d1xa0a2         101 AAVDPVG----------------------------GRTLATVLSRMRYGGAVAVSGL  129 (176)
T ss_dssp             EEEECST----------------------------TTTHHHHHHTEEEEEEEEECSC
T ss_pred             EEEEcCC----------------------------chhHHHHHHHhCCCceEEEeec
Confidence            8877421                            2347788889999999998654


No 149
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.93  E-value=0.22  Score=38.79  Aligned_cols=127  Identities=13%  Similarity=-0.006  Sum_probs=77.8

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh--cCC
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR--LAG  114 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~--~~~  114 (256)
                      |++|.=|=-|++.++.++++.|.++ .++.|+..+-+++..+.+.+.+...+....++..|+.+...      ..  .-+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            5677555445566777788776543 25699999999999998888888777666888888765431      00  126


Q ss_pred             CccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          115 LVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ++|++|.|--......... ...+-...+...   ..-.-.+.+.+...|+++|+++.+.
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN---~~g~~~l~~~~lp~m~~~g~ivnis  137 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTN---FFGTRDVCTELLPLIKPQGRVVNVS  137 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHH---THHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCccccc
Confidence            8999999865432222111 000000000000   0012244667788899999988765


No 150
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}
Probab=93.79  E-value=0.054  Score=39.27  Aligned_cols=73  Identities=22%  Similarity=0.224  Sum_probs=44.2

Q ss_pred             CCCCEEEEecccccHHH-HHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcc----h-hhchhhhcCC
Q 025211           41 HHPVLCMEVGCGSGYVI-TSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTD----I-ASGLEKRLAG  114 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~-~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d----~-~~~~~~~~~~  114 (256)
                      +++.+|+=+|+|.+... ..++..    .....|+++|.+++..+.+++    .|.+ .++..+    . ..........
T Consensus        27 k~g~~VlI~G~Gg~g~~~~~~~~~----~g~~~Vi~~~~~~~rl~~a~~----~GAd-~~in~~~~~~~~~~~~~~~~~~   97 (175)
T d1cdoa2          27 EPGSTCAVFGLGAVGLAAVMGCHS----AGAKRIIAVDLNPDKFEKAKV----FGAT-DFVNPNDHSEPISQVLSKMTNG   97 (175)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHH----TTCSEEEEECSCGGGHHHHHH----TTCC-EEECGGGCSSCHHHHHHHHHTS
T ss_pred             CCCCEEEEEecCCccchHHHHHHH----HhhchheeecchHHHHHHHHH----cCCc-EEEcCCCcchhHHHHHHhhccC
Confidence            68899999999885543 223333    334589999999998888765    3433 233211    1 1111111245


Q ss_pred             CccEEEEC
Q 025211          115 LVDVMVVN  122 (256)
Q Consensus       115 ~fD~Ii~n  122 (256)
                      .+|+++-.
T Consensus        98 G~d~vid~  105 (175)
T d1cdoa2          98 GVDFSLEC  105 (175)
T ss_dssp             CBSEEEEC
T ss_pred             Ccceeeee
Confidence            79999874


No 151
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=93.67  E-value=0.56  Score=36.25  Aligned_cols=128  Identities=16%  Similarity=0.155  Sum_probs=76.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-HHHHHHHHHHHHHcCCcceEEEcchhhchh--h------h
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-PYAVEVTRKTLEAHNVHADLINTDIASGLE--K------R  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~  111 (256)
                      -++++||=-|++.| ++.++++.+.++  +++|+..|.+ ++.++.+.+.+...+.+..++..|+.+...  .      .
T Consensus        16 L~gK~~lITGas~G-IG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          16 LEGKVALVTGAGRG-IGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CTTCEEEETTTTSH-HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCH-HHHHHHHHHHHc--CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            36788888888655 466677777654  6789999876 566777777777777666777788765321  1      0


Q ss_pred             cCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          112 LAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ..+..|+++.|..............+.......  ....-.-.+.+.+...|+.+|.++++.
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~--~nl~~~~~~~~~~~~~m~~~g~~i~i~  152 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT--INTRGQFFVAREAYKHLEIGGRLILMG  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH--HHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhh--hccceeeeecccccccccccccccccc
Confidence            126799999987655433321111110000000  000112344566777788888877754


No 152
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}
Probab=93.51  E-value=0.32  Score=37.84  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=58.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc---eEEEcchhhchh--h----h-
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA---DLINTDIASGLE--K----R-  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~---~~~~~d~~~~~~--~----~-  111 (256)
                      +++++|=-|++.| ++.++++.+.+.  +++|+.+|.+++.++.+.+.+...+...   ..+..|+.+...  .    . 
T Consensus         3 ~gK~alITGas~G-IG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNG-IGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence            5788888887665 577777777654  6799999999999998888887766432   677888765421  1    0 


Q ss_pred             -cCCCccEEEECCC
Q 025211          112 -LAGLVDVMVVNPP  124 (256)
Q Consensus       112 -~~~~fD~Ii~npP  124 (256)
                       .-+++|+++.|.-
T Consensus        80 ~~~G~iDilVnnAG   93 (274)
T d1xhla_          80 AKFGKIDILVNNAG   93 (274)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCceEEEeecc
Confidence             1268999999854


No 153
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=93.17  E-value=0.32  Score=37.43  Aligned_cols=127  Identities=15%  Similarity=0.110  Sum_probs=76.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEE-eCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h------h
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIAT-DINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K------R  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~gi-D~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~  111 (256)
                      ..|++||=-| |++.++.++++.+.++  +++|+.. +.+++..+.+.+.+...+.+...+..|+.+...  .      .
T Consensus         4 L~GK~alITG-as~GIG~aia~~la~~--G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           4 LAGKVALTTG-AGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTCEEEETT-TTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeC-CCCHHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            3678888777 5677788888887754  5677764 577787888888888887776788888765321  1      1


Q ss_pred             cCCCccEEEECCCCCCCCCccc-ccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          112 LAGLVDVMVVNPPYVPTPEDEV-GREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      ..+.+|++|.|........... ...+-...+...   ....-.+.+.+...++.+|.++++.
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n---~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLN---TRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHH---THHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhc---cceeeeehhhhhhhhhcCCcccccc
Confidence            1267999999886654333221 111111111000   0012234566667778887776654


No 154
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}
Probab=93.16  E-value=0.57  Score=35.99  Aligned_cols=85  Identities=13%  Similarity=0.101  Sum_probs=61.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh---------hh
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE---------KR  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~---------~~  111 (256)
                      -++++||=.|++ +.++.++++.+.++  +++|+.++.+++.++.+.+.+...+....++..|+.+.-.         ..
T Consensus         4 L~gK~alITGas-~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           4 LKGTTALVTGGS-KGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CTTCEEEEESCS-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            368889988886 45566677776654  6799999999999988888888777766777888765431         12


Q ss_pred             cCCCccEEEECCCCCCC
Q 025211          112 LAGLVDVMVVNPPYVPT  128 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~  128 (256)
                      ..+..|+++.|......
T Consensus        81 ~~g~idilinnag~~~~   97 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIH   97 (258)
T ss_dssp             TTSCCCEEEECCCCCCC
T ss_pred             hCCCcEEEecccccccc
Confidence            23678999987755443


No 155
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=92.06  E-value=0.29  Score=35.79  Aligned_cols=98  Identities=10%  Similarity=0.046  Sum_probs=53.6

Q ss_pred             CCCCEEEEeccc---ccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc---chhhch---hh-
Q 025211           41 HHPVLCMEVGCG---SGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT---DIASGL---EK-  110 (256)
Q Consensus        41 ~~~~~VLDlGcG---~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~---d~~~~~---~~-  110 (256)
                      +++.+||=+..|   .|..++.+++.+     +++++++--+++..+...+.++..|.+. ++.-   +..+..   .+ 
T Consensus        27 ~~g~~vli~~ga~g~vG~~aiqlAk~~-----Ga~vI~~v~~~~~~~~~~~~~~~lGad~-vi~~~~~~~~~~~~~v~~~  100 (189)
T d1gu7a2          27 TPGKDWFIQNGGTSAVGKYASQIGKLL-----NFNSISVIRDRPNLDEVVASLKELGATQ-VITEDQNNSREFGPTIKEW  100 (189)
T ss_dssp             CTTTCEEEESCTTSHHHHHHHHHHHHH-----TCEEEEEECCCTTHHHHHHHHHHHTCSE-EEEHHHHHCGGGHHHHHHH
T ss_pred             CCCCEEEEEeCCCchHHHHHHHHHhhc-----CCeEEEEEecccccchHHhhhhhccccE-EEeccccchhHHHHHHHHH
Confidence            466667666333   456666666653     5688877444444444444445556543 2222   111111   11 


Q ss_pred             --hcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEE
Q 025211          111 --RLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLV  172 (256)
Q Consensus       111 --~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  172 (256)
                        .....+|+++-.-                            -...+....+.|+++|+++.+
T Consensus       101 ~~~~g~~vdvv~D~v----------------------------g~~~~~~~~~~l~~~G~~v~~  136 (189)
T d1gu7a2         101 IKQSGGEAKLALNCV----------------------------GGKSSTGIARKLNNNGLMLTY  136 (189)
T ss_dssp             HHHHTCCEEEEEESS----------------------------CHHHHHHHHHTSCTTCEEEEC
T ss_pred             HhhccCCceEEEECC----------------------------CcchhhhhhhhhcCCcEEEEE
Confidence              1135689987521                            023456677899999999874


No 156
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Probab=92.00  E-value=1.1  Score=31.70  Aligned_cols=114  Identities=18%  Similarity=0.201  Sum_probs=65.3

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc----CCcc----eEEEcchhhchhhhcCCC
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH----NVHA----DLINTDIASGLEKRLAGL  115 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~----~~~~----~~~~~d~~~~~~~~~~~~  115 (256)
                      ++|.=+|+|.  ++..++..|.+.  +..|+.+|.+++.++..++.-...    +...    .....|..+..     ..
T Consensus         2 k~iaIiGaG~--~G~~~A~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~   72 (184)
T d1bg6a2           2 KTYAVLGLGN--GGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KD   72 (184)
T ss_dssp             CEEEEECCSH--HHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TT
T ss_pred             CEEEEECccH--HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cC
Confidence            4566666654  444456666543  569999999998887765542110    0111    12222332221     46


Q ss_pred             ccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCC-HHHHHHHHHHcCC
Q 025211          116 VDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAND-PSQICLQMMEKGY  191 (256)
Q Consensus       116 fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~~~~g~  191 (256)
                      .|+|+..-|-                        .....+++++..+|+++-.+++ ..+... .......+...+.
T Consensus        73 aD~iii~v~~------------------------~~~~~~~~~i~~~l~~~~~iv~-~~g~~~~~~~~~~~~~~~~~  124 (184)
T d1bg6a2          73 ADVILIVVPA------------------------IHHASIAANIASYISEGQLIIL-NPGATGGALEFRKILRENGA  124 (184)
T ss_dssp             CSEEEECSCG------------------------GGHHHHHHHHGGGCCTTCEEEE-SSCCSSHHHHHHHHHHHTTC
T ss_pred             CCEEEEEEch------------------------hHHHHHHHHhhhccCCCCEEEE-eCCCCccHHHHHHHHHHhcC
Confidence            8999874331                        0157889999999999987665 333332 3345556655543


No 157
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}
Probab=91.99  E-value=0.53  Score=36.33  Aligned_cols=81  Identities=14%  Similarity=0.209  Sum_probs=55.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++.+|=.|++.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+...+ ...++..|+.+...  ..      .-
T Consensus         5 ~gKvalITGas~G-IG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           5 QDKVAIITGGAGG-IGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            6788998997665 677778777654  6799999999988887766654322 12567778765421  10      12


Q ss_pred             CCccEEEECCCCC
Q 025211          114 GLVDVMVVNPPYV  126 (256)
Q Consensus       114 ~~fD~Ii~npP~~  126 (256)
                      +++|++|.|--..
T Consensus        81 g~iD~lVnnAG~~   93 (268)
T d2bgka1          81 GKLDIMFGNVGVL   93 (268)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCcceeccccccc
Confidence            6899999876543


No 158
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}
Probab=91.63  E-value=0.74  Score=31.07  Aligned_cols=89  Identities=11%  Similarity=0.015  Sum_probs=57.5

Q ss_pred             ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEECCCCCCC
Q 025211           51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVVNPPYVPT  128 (256)
Q Consensus        51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~npP~~~~  128 (256)
                      ||.|.++..+++.|.    +..++.+|.+++..+.++.    .+  ..++.+|..+..  ....-.+.+.+++..+    
T Consensus         6 ~G~g~~g~~l~~~L~----~~~i~vi~~d~~~~~~~~~----~~--~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~----   71 (129)
T d2fy8a1           6 CGWSESTLECLRELR----GSEVFVLAEDENVRKKVLR----SG--ANFVHGDPTRVSDLEKANVRGARAVIVNLE----   71 (129)
T ss_dssp             ESCCHHHHHHHHTSC----GGGEEEEESCTTHHHHHHH----TT--CEEEESCTTSHHHHHHTTCTTCSEEEECCS----
T ss_pred             ECCCHHHHHHHHHHc----CCCCEEEEcchHHHHHHHh----cC--ccccccccCCHHHHHHhhhhcCcEEEEecc----
Confidence            677888888888875    3368899999998776543    22  378889976542  2222367888888532    


Q ss_pred             CCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          129 PEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                       +                   +....++-...+.+.|...++...
T Consensus        72 -~-------------------d~~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          72 -S-------------------DSETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             -S-------------------HHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred             -c-------------------hhhhHHHHHHHHHHCCCceEEEEE
Confidence             0                   112233444456688888777644


No 159
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]}
Probab=91.41  E-value=0.64  Score=36.07  Aligned_cols=118  Identities=17%  Similarity=0.113  Sum_probs=76.0

Q ss_pred             EEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh--cCCCccEEEECCC
Q 025211           47 MEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR--LAGLVDVMVVNPP  124 (256)
Q Consensus        47 LDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~fD~Ii~npP  124 (256)
                      +..-+|+-.++   +..+   .++-+++.+|+.|.-.+..++++.. .....++..|..+.+...  +.++=-+|+.+||
T Consensus        87 l~~YPGSP~ia---~~ll---R~~Drl~l~ELHp~e~~~L~~~~~~-~~~~~v~~~DG~~~l~allPP~~rRgLVLIDPp  159 (271)
T d2oo3a1          87 LSYYPGSPYFA---INQL---RSQDRLYLCELHPTEYNFLLKLPHF-NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS  159 (271)
T ss_dssp             CCEEECHHHHH---HHHS---CTTSEEEEECCSHHHHHHHTTSCCT-TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred             cCcCCCCHHHH---HHhC---CCCCceEEeecCHHHHHHHHHHhcc-CCCceEEcCchHHHHHhhCCCCCCceEEEecCC
Confidence            35677777752   2333   3456999999999999888876532 123488899988776432  2355679999999


Q ss_pred             CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccc--cCeEEEEEEeCCCC--HHHHHHHHHHcCCc
Q 025211          125 YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLS--KRGWLYLVTLTAND--PSQICLQMMEKGYA  192 (256)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk--pgG~l~~~~~~~~~--~~~~~~~~~~~g~~  192 (256)
                      |-...                     .+.++++.+...++  +.|++++..|-...  ...+.+.+.+.+.+
T Consensus       160 YE~k~---------------------ey~~v~~~l~~a~kr~~~g~~~iWYPi~~~~~~~~~~~~l~~~~~k  210 (271)
T d2oo3a1         160 YERKE---------------------EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSK  210 (271)
T ss_dssp             CCSTT---------------------HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCSS
T ss_pred             cCCHH---------------------HHHHHHHHHHHHHHhCCCceEEEEeeccCcHHHHHHHHHHHhcCcc
Confidence            95322                     25566666666655  67888887774442  23455555555544


No 160
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=91.17  E-value=2.1  Score=32.43  Aligned_cols=83  Identities=18%  Similarity=0.150  Sum_probs=57.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH-HHcCCcceEEEcchhhchh--hh------
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL-EAHNVHADLINTDIASGLE--KR------  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~-~~~~~~~~~~~~d~~~~~~--~~------  111 (256)
                      -+++++|=-|++.| ++.++++.+.+.  +++|+.+|.+++.++.+.+.+ ...+.+...+..|+.+...  ..      
T Consensus         3 l~gK~~lITGas~G-IG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           3 LRGRVALVTGGSRG-LGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CTTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            36788888887655 577777777654  679999999988877665554 4446555677888765421  10      


Q ss_pred             cCCCccEEEECCCCC
Q 025211          112 LAGLVDVMVVNPPYV  126 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~  126 (256)
                      .-+++|++|.|--..
T Consensus        80 ~~g~iDiLVnnAG~~   94 (251)
T d1vl8a_          80 KFGKLDTVVNAAGIN   94 (251)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence            126899999986543


No 161
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}
Probab=91.09  E-value=0.71  Score=37.43  Aligned_cols=131  Identities=12%  Similarity=0.089  Sum_probs=69.7

Q ss_pred             CCEEEEecccccHHHHHHHHH--------hc----ccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--c---eEEEcchh
Q 025211           43 PVLCMEVGCGSGYVITSLALM--------LG----QEVPGVQYIATDINPYAVEVTRKTLEAHNVH--A---DLINTDIA  105 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~--------l~----~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~---~~~~~d~~  105 (256)
                      .-+|.|+||.+|..++.+...        +.    +..|..+|+--|+-.+-....=+.+....-.  .   ..+-+.+.
T Consensus        52 ~~~IADlGCS~G~Ntl~~v~~iI~~i~~~~~~~~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY  131 (359)
T d1m6ex_          52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY  131 (359)
T ss_dssp             EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred             ceEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCCCcchHHHHHHhccccccCCCCeEEEecCCchh
Confidence            368999999999877432221        11    1235678888887766555544333221111  1   22233333


Q ss_pred             hchhhhcCCCccEEEECCCCCCCCCccccccc-chhhhcCC--CC---------cHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREG-IASAWAGG--EN---------GRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~-~~~~~~~~--~~---------~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .-+  +++++.|++++....+..+........ ....+..+  ..         ....+..+|+.=.+-|+|||+++++.
T Consensus       132 ~rL--fP~~Slh~~~Ss~alHWLS~vP~~l~~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~  209 (359)
T d1m6ex_         132 GRL--FPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI  209 (359)
T ss_dssp             SCC--SCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred             hhc--CCCCceEEeeehhhhhhhhcCCccccCCCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence            322  346889999986555444331111000 00011100  00         12255677777778899999999976


Q ss_pred             eC
Q 025211          174 LT  175 (256)
Q Consensus       174 ~~  175 (256)
                      .+
T Consensus       210 ~g  211 (359)
T d1m6ex_         210 LG  211 (359)
T ss_dssp             EE
T ss_pred             ec
Confidence            43


No 162
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=91.06  E-value=0.62  Score=35.81  Aligned_cols=84  Identities=12%  Similarity=0.110  Sum_probs=59.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh---------hh
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE---------KR  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~---------~~  111 (256)
                      -+++++|=-|+++| ++.++++.+.+.  +++|+.+|.+++.++.+.+.+...+.+...+..|+.+...         ..
T Consensus         6 LkgK~alVTGas~G-IG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           6 LKAKTVLVTGGTKG-IGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CTTCEEEETTTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            36889998887655 566777776654  6799999999999988888887766666777788754321         11


Q ss_pred             cCCCccEEEECCCCCC
Q 025211          112 LAGLVDVMVVNPPYVP  127 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~  127 (256)
                      +.+.+|+++.|.....
T Consensus        83 ~~g~idilvnnAG~~~   98 (259)
T d1xq1a_          83 FGGKLDILINNLGAIR   98 (259)
T ss_dssp             HTTCCSEEEEECCC--
T ss_pred             hCCCcccccccccccC
Confidence            2367999999876543


No 163
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=91.06  E-value=1.6  Score=33.15  Aligned_cols=78  Identities=21%  Similarity=0.277  Sum_probs=55.7

Q ss_pred             EEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------h--hcCCCcc
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------K--RLAGLVD  117 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~--~~~~~fD  117 (256)
                      +|=-|++ +.++.++++.+.++  +++|+.+|.+++.++.+.+.+...+.+...+..|+.+...      .  ..-+++|
T Consensus         4 alITGas-~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           4 ALVTGAG-QGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             EEEETTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEcCCc-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            3555654 55677778777654  6799999999999998888887777666777888765421      0  0127899


Q ss_pred             EEEECCCCC
Q 025211          118 VMVVNPPYV  126 (256)
Q Consensus       118 ~Ii~npP~~  126 (256)
                      ++|.|--+.
T Consensus        81 ilVnnAG~~   89 (255)
T d1gega_          81 VIVNNAGVA   89 (255)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999986544


No 164
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}
Probab=91.00  E-value=1  Score=31.32  Aligned_cols=110  Identities=15%  Similarity=0.027  Sum_probs=63.8

Q ss_pred             ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEECCCCCCC
Q 025211           51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVVNPPYVPT  128 (256)
Q Consensus        51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~npP~~~~  128 (256)
                      ||.|.++..+++.|.+.  +..++.+|.+++......+...  .....++.+|..+..  ....-.+.|.+++..+-   
T Consensus         9 ~G~g~~g~~l~~~L~~~--~~~v~vId~d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~---   81 (153)
T d1id1a_           9 CGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN---   81 (153)
T ss_dssp             ECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC---
T ss_pred             ECCCHHHHHHHHHHHHc--CCCEEEEeccchhHHHHHHHhh--cCCcEEEEccCcchHHHHHhccccCCEEEEcccc---
Confidence            55578888888887654  4589999999875443333322  122378899977652  22234678999884320   


Q ss_pred             CCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCc
Q 025211          129 PEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYA  192 (256)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~  192 (256)
                                           +....++-...+-+.|.-.++....    ..+....+++.|..
T Consensus        82 ---------------------d~~n~~~~~~~r~~~~~~~iia~~~----~~~~~~~l~~~Gad  120 (153)
T d1id1a_          82 ---------------------DADNAFVVLSAKDMSSDVKTVLAVS----DSKNLNKIKMVHPD  120 (153)
T ss_dssp             ---------------------HHHHHHHHHHHHHHTSSSCEEEECS----SGGGHHHHHTTCCS
T ss_pred             ---------------------HHHHHHHHHHHHHhCCCCceEEEEc----CHHHHHHHHHCCCC
Confidence                                 1112223334455677777666332    22345556666654


No 165
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=90.78  E-value=0.96  Score=34.52  Aligned_cols=81  Identities=26%  Similarity=0.242  Sum_probs=57.8

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h------hcCC
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K------RLAG  114 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~~~~  114 (256)
                      ++.+|=-|++ +.++.++++.|.++  +++|+.+|.+++.++.+.+.+...+.+...+..|+.+...  .      ..-+
T Consensus         2 gKValITGas-~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGAT-SGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCS-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4555666754 45577778877654  6799999999999998888888777666788888765421  1      0127


Q ss_pred             CccEEEECCCCC
Q 025211          115 LVDVMVVNPPYV  126 (256)
Q Consensus       115 ~fD~Ii~npP~~  126 (256)
                      +.|++|.|--..
T Consensus        79 ~iDilVnnAG~~   90 (257)
T d2rhca1          79 PVDVLVNNAGRP   90 (257)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            899999986543


No 166
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}
Probab=90.72  E-value=0.56  Score=33.94  Aligned_cols=93  Identities=14%  Similarity=0.044  Sum_probs=56.9

Q ss_pred             CCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           43 PVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        43 ~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      +..||=.|.  |.|.+++.+++.     -+++|+++.-+++..+.+++.    |.+ .++.-+-.+......+..+|.++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~-----~Ga~Via~~~~~~k~~~~~~l----Gad-~vi~~~~~~~~~~l~~~~~~~vv  101 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHK-----LGYQVVAVSGRESTHEYLKSL----GAS-RVLPRDEFAESRPLEKQVWAGAI  101 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCGGGHHHHHHH----TEE-EEEEGGGSSSCCSSCCCCEEEEE
T ss_pred             CCcEEEEEccccchHHHHHHHHH-----cCCCeEEEecchhHHHHHHhh----ccc-cccccccHHHHHHHHhhcCCeeE
Confidence            346775543  345566666665     367899999999887777643    332 33333222222222345678876


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      -+ .                           -...+....+.|+++|+++.+-
T Consensus       102 D~-V---------------------------gg~~~~~~l~~l~~~Griv~~G  126 (177)
T d1o89a2         102 DT-V---------------------------GDKVLAKVLAQMNYGGCVAACG  126 (177)
T ss_dssp             ES-S---------------------------CHHHHHHHHHTEEEEEEEEECC
T ss_pred             EE-c---------------------------chHHHHHHHHHhccccceEeec
Confidence            42 1                           1355788888999999999864


No 167
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.71  E-value=0.87  Score=34.62  Aligned_cols=86  Identities=19%  Similarity=0.172  Sum_probs=61.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h------hcC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K------RLA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~~~  113 (256)
                      .|+.||=-|++.|. +.++++.+.++  +++|+.+|.+++.++...+.+...+.....+..|+.+...  .      ..-
T Consensus         6 ~Gkv~lITGas~GI-G~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGI-GRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TTCEEEEETTTSHH-HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHH-HHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56777777877764 55666666643  6799999999999998888887777666777888765532  0      123


Q ss_pred             CCccEEEECCCCCCCCC
Q 025211          114 GLVDVMVVNPPYVPTPE  130 (256)
Q Consensus       114 ~~fD~Ii~npP~~~~~~  130 (256)
                      +..|+++.|--......
T Consensus        83 g~idilinnag~~~~~~   99 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSD   99 (244)
T ss_dssp             CCCSEEEECCCCCCCCC
T ss_pred             CCCceeEeecccccccc
Confidence            67999999876554443


No 168
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}
Probab=90.20  E-value=0.42  Score=34.26  Aligned_cols=96  Identities=17%  Similarity=0.070  Sum_probs=58.8

Q ss_pred             CCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh-hchhhhcCCCccE
Q 025211           42 HPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA-SGLEKRLAGLVDV  118 (256)
Q Consensus        42 ~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~fD~  118 (256)
                      ++..||=-|.  |.|.+.+.+++.+     +++|+++.-+++..+.+++.    +.+.-+...|.. +.......+.+|+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~-----Ga~Viat~~s~~k~~~~~~l----Gad~vi~~~~~~~~~~~~~~~~gvd~   93 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKR-----GYDVVASTGNREAADYLKQL----GASEVISREDVYDGTLKALSKQQWQG   93 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHH-----TCCEEEEESSSSTHHHHHHH----TCSEEEEHHHHCSSCCCSSCCCCEEE
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHc-----CCceEEEecCHHHHHHHHhh----cccceEeccchhchhhhcccCCCceE
Confidence            3456776553  4556777777764     56899999988877776553    443222111111 1111112457999


Q ss_pred             EEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          119 MVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       119 Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      |+-+.                            -...+..+.+.|+++|+++++-.
T Consensus        94 vid~v----------------------------gg~~~~~~~~~l~~~G~iv~~G~  121 (167)
T d1tt7a2          94 AVDPV----------------------------GGKQLASLLSKIQYGGSVAVSGL  121 (167)
T ss_dssp             EEESC----------------------------CTHHHHHHHTTEEEEEEEEECCC
T ss_pred             EEecC----------------------------cHHHHHHHHHHhccCceEEEeec
Confidence            87641                            13557888999999999998543


No 169
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}
Probab=90.08  E-value=1.1  Score=34.12  Aligned_cols=79  Identities=22%  Similarity=0.213  Sum_probs=53.1

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h----h--cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K----R--LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~----~--~~  113 (256)
                      +++++|=-|.+. .++.++++.+.++  +++|+..|.+++.++.+.+.+   +-...++..|+.+...  .    .  .-
T Consensus         5 ~gK~alITGas~-GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           5 QGKVALVTGGAS-GVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTCEEEETTTTS-HHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            678888888654 4677788877654  679999999998877665543   3334566677654321  0    0  12


Q ss_pred             CCccEEEECCCCC
Q 025211          114 GLVDVMVVNPPYV  126 (256)
Q Consensus       114 ~~fD~Ii~npP~~  126 (256)
                      +++|++|.|.-..
T Consensus        79 g~iDilVnnAG~~   91 (253)
T d1hxha_          79 GTLNVLVNNAGIL   91 (253)
T ss_dssp             CSCCEEEECCCCC
T ss_pred             CCCCeEEeccccc
Confidence            6899999987544


No 170
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}
Probab=90.08  E-value=1.3  Score=33.74  Aligned_cols=82  Identities=16%  Similarity=0.090  Sum_probs=55.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++++|=-|.+ +.++.++++.+.+.  +++|+.+|.+++.++.+.+.+.. +-...++..|+.+...  ..      .-
T Consensus         5 ~gK~alVTGas-~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           5 DGKVAIITGGT-LGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57888888855 45677777777654  67999999999888877766532 2233777888765421  10      12


Q ss_pred             CCccEEEECCCCCC
Q 025211          114 GLVDVMVVNPPYVP  127 (256)
Q Consensus       114 ~~fD~Ii~npP~~~  127 (256)
                      +++|++|.|-.+..
T Consensus        81 G~iDiLVnnAg~~~   94 (251)
T d1zk4a1          81 GPVSTLVNNAGIAV   94 (251)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCceEEEecccccc
Confidence            68999999875543


No 171
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}
Probab=89.64  E-value=0.67  Score=35.58  Aligned_cols=82  Identities=24%  Similarity=0.324  Sum_probs=59.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++++|=-|.+. .++.++++.|.+.  ++.|+.+|.+++.++.+.+.+...+.+...+..|+.+...  ..      .-
T Consensus         4 ~gK~alITGas~-GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGG-NIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            678888778654 4567777777654  6799999999999998888887777666778888765421  10      12


Q ss_pred             CCccEEEECCCCC
Q 025211          114 GLVDVMVVNPPYV  126 (256)
Q Consensus       114 ~~fD~Ii~npP~~  126 (256)
                      +++|++|.|-.+.
T Consensus        81 g~iDilVnnaG~~   93 (260)
T d1zema1          81 GKIDFLFNNAGYQ   93 (260)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCeehhhhccc
Confidence            6899999886543


No 172
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=89.00  E-value=1.1  Score=32.56  Aligned_cols=80  Identities=8%  Similarity=0.030  Sum_probs=51.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh-hhcCCCccEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE-KRLAGLVDVM  119 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~fD~I  119 (256)
                      -++++||=.|++.| ++..+++.+.++  +++|+.++.+++..+.+.+.+..+. ...+...|+.+... ...-+..|++
T Consensus        21 l~gK~vlItGasgG-IG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~iDil   96 (191)
T d1luaa1          21 VKGKKAVVLAGTGP-VGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGAHFV   96 (191)
T ss_dssp             CTTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCCEEEEECCCHH-HHHHHHHHHHhh--ccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHhcCcCee
Confidence            47899998887655 455666666654  6799999999998887777765542 11334444433211 1112578999


Q ss_pred             EECCC
Q 025211          120 VVNPP  124 (256)
Q Consensus       120 i~npP  124 (256)
                      |.|-.
T Consensus        97 in~Ag  101 (191)
T d1luaa1          97 FTAGA  101 (191)
T ss_dssp             EECCC
T ss_pred             eecCc
Confidence            98754


No 173
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}
Probab=88.77  E-value=2  Score=32.38  Aligned_cols=80  Identities=16%  Similarity=0.219  Sum_probs=53.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h------hcC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K------RLA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~~~  113 (256)
                      +++++|=-|.+.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+.   .....+..|+.+...  .      ..-
T Consensus         3 ~gK~alITGas~G-IG~a~a~~l~~~--G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           3 EGKIALVTGASRG-IGRAIAETLAAR--GAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             TTCEEEESSCSSH-HHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            5778888886654 577777777654  6799999999988877665543   233566777654321  1      012


Q ss_pred             CCccEEEECCCCCC
Q 025211          114 GLVDVMVVNPPYVP  127 (256)
Q Consensus       114 ~~fD~Ii~npP~~~  127 (256)
                      ++.|++|.|--...
T Consensus        77 g~iDilVnnAg~~~   90 (243)
T d1q7ba_          77 GEVDILVNNAGITR   90 (243)
T ss_dssp             CSCSEEEECCCCCC
T ss_pred             CCcceehhhhhhcc
Confidence            68999998865443


No 174
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}
Probab=87.83  E-value=2.4  Score=29.21  Aligned_cols=107  Identities=14%  Similarity=0.068  Sum_probs=57.9

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCc
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPED  131 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~  131 (256)
                      |.|.++..+++.+.+..+ .+++..|.+++.++...+.   .+.  .. ..+....      ...|+|+..-+       
T Consensus         7 G~G~MG~ai~~~l~~~~~-~~i~v~~r~~~~~~~l~~~---~~~--~~-~~~~~~v------~~~Div~lavk-------   66 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGG-YRIYIANRGAEKRERLEKE---LGV--ET-SATLPEL------HSDDVLILAVK-------   66 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCS-CEEEEECSSHHHHHHHHHH---TCC--EE-ESSCCCC------CTTSEEEECSC-------
T ss_pred             cCcHHHHHHHHHHHHCCC-CcEEEEeCChhHHHHhhhh---ccc--cc-ccccccc------cccceEEEecC-------
Confidence            446666667665544343 4899999999887765543   232  11 1222221      35799886321       


Q ss_pred             ccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecC
Q 025211          132 EVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRS  200 (256)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  200 (256)
                                           ...+..+.+-+++.+.++++.......+.+.+.+. .........+..
T Consensus        67 ---------------------P~~~~~v~~~l~~~~~~viS~~ag~~~~~l~~~l~-~~~~iir~mpn~  113 (152)
T d1yqga2          67 ---------------------PQDMEAACKNIRTNGALVLSVAAGLSVGTLSRYLG-GTRRIVRVMPNT  113 (152)
T ss_dssp             ---------------------HHHHHHHHTTCCCTTCEEEECCTTCCHHHHHHHTT-SCCCEEEEECCG
T ss_pred             ---------------------HHHHHHhHHHHhhcccEEeecccCCCHHHHHHHhC-cCcceEeecccc
Confidence                                 12233444445666777776655555556555553 223455555443


No 175
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=87.63  E-value=3.1  Score=31.44  Aligned_cols=81  Identities=20%  Similarity=0.183  Sum_probs=54.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++++|=-|.+. .++.++++.+.++  +++|+.+|.+++.++.+.+.+   +.+...+..|+.+...  ..      .-
T Consensus         4 ~gK~alVTGas~-GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           4 DGKTALITGSAR-GIGRAFAEAYVRE--GARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TTEEEEEETCSS-HHHHHHHHHHHHT--TEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            578888888654 5566777777654  679999999988776655443   4444677778755421  10      12


Q ss_pred             CCccEEEECCCCCCC
Q 025211          114 GLVDVMVVNPPYVPT  128 (256)
Q Consensus       114 ~~fD~Ii~npP~~~~  128 (256)
                      ++.|++|.|.-....
T Consensus        78 g~iDilVnnAg~~~~   92 (256)
T d1k2wa_          78 GSIDILVNNAALFDL   92 (256)
T ss_dssp             SCCCEEEECCCCCCC
T ss_pred             CCccEEEeecccccc
Confidence            689999998765543


No 176
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.52  E-value=2.2  Score=32.28  Aligned_cols=78  Identities=17%  Similarity=0.185  Sum_probs=53.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh--cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR--LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~--~~  113 (256)
                      +++++|=-|++.| ++.++++.+.++  +++|+..|.+++.++.+.+.+.    ...++..|+.+...      ..  .-
T Consensus         5 ~GK~alITGas~G-IG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~----~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           5 AGKVVVVTGGGRG-IGAGIVRAFVNS--GARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTCEEEEETCSSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcC----CCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            6788998887665 677777877654  6799999999988776654321    23677778754321      10  11


Q ss_pred             CCccEEEECCCCC
Q 025211          114 GLVDVMVVNPPYV  126 (256)
Q Consensus       114 ~~fD~Ii~npP~~  126 (256)
                      +++|++|.|.-..
T Consensus        78 g~iDilVnnAG~~   90 (250)
T d1ydea1          78 GRLDCVVNNAGHH   90 (250)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEeccccc
Confidence            6799999987544


No 177
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}
Probab=86.55  E-value=1.4  Score=33.95  Aligned_cols=82  Identities=20%  Similarity=0.229  Sum_probs=57.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc---eEEEcchhhchh--h----h
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA---DLINTDIASGLE--K----R  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~---~~~~~d~~~~~~--~----~  111 (256)
                      .+++++|=.|++. .++.++++.+.++  +++|+.+|.+++.++.+.+.+...+...   ..+..|+.+...  .    .
T Consensus         3 L~gK~alVTGas~-GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   79 (272)
T d1xkqa_           3 FSNKTVIITGSSN-GIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   79 (272)
T ss_dssp             TTTCEEEETTCSS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCc-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence            3678888888654 5566777777654  6799999999999998888887665432   677888765321  1    0


Q ss_pred             --cCCCccEEEECCCC
Q 025211          112 --LAGLVDVMVVNPPY  125 (256)
Q Consensus       112 --~~~~fD~Ii~npP~  125 (256)
                        .-+++|++|.|--.
T Consensus        80 ~~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCceEEEeCCcc
Confidence              12679999998543


No 178
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=86.16  E-value=3  Score=30.32  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=25.0

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHH
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTR   87 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~   87 (256)
                      |.|.+++.+|..+.+.  +.+|+|+|++++.++...
T Consensus         7 GlG~vGl~~a~~la~~--g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             CCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHH
T ss_pred             CCCHhHHHHHHHHHhC--CCcEEEEeCCHHHHHHhc
Confidence            6666666677766544  458999999999887654


No 179
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}
Probab=86.04  E-value=3.1  Score=31.27  Aligned_cols=79  Identities=24%  Similarity=0.265  Sum_probs=52.9

Q ss_pred             EEEecccccHHHHHHHHHhcccCCCceEEEEeC-CHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cCCCc
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPGVQYIATDI-NPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LAGLV  116 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~-~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~~~f  116 (256)
                      ||=-|. ++.++.++++.+.+.  +++|+..|. +++..+.+.+.+...+-+..++..|+.+...  ..      .-+++
T Consensus         4 ~lITGa-s~GIG~a~a~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           4 VVVTGA-SRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             EEETTC-SSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             EEEeCC-CcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            333454 455788888887754  678887765 6777888888777777666778888765421  10      12689


Q ss_pred             cEEEECCCCCC
Q 025211          117 DVMVVNPPYVP  127 (256)
Q Consensus       117 D~Ii~npP~~~  127 (256)
                      |++|.|--...
T Consensus        81 DiLVnnAg~~~   91 (244)
T d1edoa_          81 DVVVNNAGITR   91 (244)
T ss_dssp             SEEEECCCCCC
T ss_pred             Ccccccccccc
Confidence            99999865443


No 180
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}
Probab=85.43  E-value=4.5  Score=28.43  Aligned_cols=113  Identities=15%  Similarity=0.103  Sum_probs=61.7

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-chhhchhhhcCCCccEEEECCCCCCCCC
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT-DIASGLEKRLAGLVDVMVVNPPYVPTPE  130 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~fD~Ii~npP~~~~~~  130 (256)
                      |.|.++..+++.|.+.  +..|++.|.+++..+...+..........+... +....... ....-+++++-++      
T Consensus         8 GlG~MG~~ma~~L~~~--G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------   78 (178)
T d1pgja2           8 GLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAAS-LKKPRKALILVQA------   78 (178)
T ss_dssp             CCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHH-BCSSCEEEECCCC------
T ss_pred             eehHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHh-cccceEEEEeecC------
Confidence            7788888888887754  568999999999877665543221211122222 22222211 1222233333222      


Q ss_pred             cccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHH---HHHHHHHHcCCcE
Q 025211          131 DEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPS---QICLQMMEKGYAA  193 (256)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~g~~~  193 (256)
                                        .......+......+++|.+++-  .+....+   ++.+.+.+.++..
T Consensus        79 ------------------~~~~~~~~~~~~~~~~~~~iii~--~st~~~~~~~~~~~~l~~~~~~~  124 (178)
T d1pgja2          79 ------------------GAATDSTIEQLKKVFEKGDILVD--TGNAHFKDQGRRAQQLEAAGLRF  124 (178)
T ss_dssp             ------------------SHHHHHHHHHHHHHCCTTCEEEE--CCCCCHHHHHHHHHHHHTTTCEE
T ss_pred             ------------------cchhhhhhhhhhhhccccceecc--cCccchhHHHHHHHHHhhcceeE
Confidence                              12245667788888999887765  2233333   4555565666543


No 181
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}
Probab=85.33  E-value=3.2  Score=31.90  Aligned_cols=86  Identities=14%  Similarity=0.193  Sum_probs=58.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH-HcCCcceEEEcchhhchh--------hh
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE-AHNVHADLINTDIASGLE--------KR  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~-~~~~~~~~~~~d~~~~~~--------~~  111 (256)
                      .+++++|=-|++.| ++.++++.+.+.  +++|+.+|.+++.++.+.+.+. ..+....++..|+.+...        ..
T Consensus        23 l~gK~alITGas~G-IG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          23 FQGKVAFITGGGTG-LGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCH-HHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            46788998888665 677778777654  6799999999988776665543 445555677777754421        11


Q ss_pred             cCCCccEEEECCCCCCCC
Q 025211          112 LAGLVDVMVVNPPYVPTP  129 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~~~  129 (256)
                      ..+++|+++.|.-.....
T Consensus       100 ~~g~iDilvnnAg~~~~~  117 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFIS  117 (294)
T ss_dssp             HTCSCSEEEECCCCCCCS
T ss_pred             hccccchhhhhhhhcccc
Confidence            247899999987554433


No 182
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}
Probab=85.23  E-value=2.1  Score=32.57  Aligned_cols=84  Identities=7%  Similarity=0.017  Sum_probs=57.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHH-HHcCCcceEEEcchhhchh------h--h
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTL-EAHNVHADLINTDIASGLE------K--R  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~-~~~~~~~~~~~~d~~~~~~------~--~  111 (256)
                      .+++++|=-|. ++.++.++++.+.+.  +++|+.+|.+++.++.+.+.+ ...+.+...+..|+.+...      .  .
T Consensus         7 l~gK~alITGa-s~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           7 FVNKTIIVTGG-NRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             CTTEEEEEETT-TSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC-CCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46788888885 456677788877654  679999999877665554444 4456566777888765421      1  1


Q ss_pred             cCCCccEEEECCCCCC
Q 025211          112 LAGLVDVMVVNPPYVP  127 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~  127 (256)
                      .-+++|++|.|.....
T Consensus        84 ~~g~iDilVnnAg~~~   99 (260)
T d1h5qa_          84 DLGPISGLIANAGVSV   99 (260)
T ss_dssp             HSCSEEEEEECCCCCC
T ss_pred             HhCCCcEecccccccc
Confidence            1378999999876543


No 183
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}
Probab=85.19  E-value=3.6  Score=30.77  Aligned_cols=82  Identities=18%  Similarity=0.216  Sum_probs=54.6

Q ss_pred             EEEecccccHHHHHHHHHhcccCCC-----ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h------hc
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPG-----VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K------RL  112 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~-----~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~------~~  112 (256)
                      ||=-|++.| ++.++++.+.+++.+     ..++..+.+++.++.+.+.+...+....++..|+.+...  .      ..
T Consensus         4 vlITGas~G-IG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           4 LLITGAGKG-IGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEETTTSH-HHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEccCCCH-HHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            344566555 666777776554321     248999999999988888877766666778888765431  1      11


Q ss_pred             CCCccEEEECCCCCCC
Q 025211          113 AGLVDVMVVNPPYVPT  128 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~~  128 (256)
                      -++.|+++.|.-....
T Consensus        83 ~g~iDilvnnAg~~~~   98 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRF   98 (240)
T ss_dssp             TSCCSEEEECCCCCCC
T ss_pred             cCCcceeecccccccC
Confidence            3689999988755443


No 184
>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}
Probab=85.15  E-value=2.2  Score=32.08  Aligned_cols=129  Identities=11%  Similarity=0.059  Sum_probs=68.7

Q ss_pred             CCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--------hhc
Q 025211           42 HPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--------KRL  112 (256)
Q Consensus        42 ~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--------~~~  112 (256)
                      ++++||=.|+++| .++.++++.+.++  +++|+..+.+++..+.+.+.....+.. .....|..+...        ...
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSD-IVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCC-CEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCc-ceeecccchHHHHHHHHHHhhhc
Confidence            6788998888764 4455566666543  678999999988777776666554432 333444332211        112


Q ss_pred             CCCccEEEECCCCCCCCCccccccc--chhhhcCC-CCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          113 AGLVDVMVVNPPYVPTPEDEVGREG--IASAWAGG-ENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      .+..|.++.|..+...........+  ....|... .........+.+.+...+++++.++++.
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~is  144 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS  144 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEec
Confidence            4778999988655432221100000  00000000 0000122334455667788888877755


No 185
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}
Probab=84.30  E-value=3.1  Score=31.40  Aligned_cols=75  Identities=21%  Similarity=0.248  Sum_probs=49.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh--cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR--LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~--~~  113 (256)
                      +++++|=-|.+ +.++.++++.+.++  +++|+..|.+++..+.+++.      ...++..|+.+...      ..  .-
T Consensus         4 ~GK~alITGas-~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           4 AGKGVLVTGGA-RGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAI------GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSTTHHHHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            67888888855 45677778877654  67999999998776554321      23566777765321      10  12


Q ss_pred             CCccEEEECCCC
Q 025211          114 GLVDVMVVNPPY  125 (256)
Q Consensus       114 ~~fD~Ii~npP~  125 (256)
                      ++.|++|.|--.
T Consensus        75 G~iDiLVnnAG~   86 (248)
T d2d1ya1          75 GRVDVLVNNAAI   86 (248)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCeEEEeCcC
Confidence            689999988644


No 186
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}
Probab=84.14  E-value=4  Score=30.83  Aligned_cols=83  Identities=20%  Similarity=0.285  Sum_probs=54.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-HHHHHHHHHHHH-HcCCcceEEEcchhhchh--hh------
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-PYAVEVTRKTLE-AHNVHADLINTDIASGLE--KR------  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-~~~i~~a~~~~~-~~~~~~~~~~~d~~~~~~--~~------  111 (256)
                      +++++|=-|++.| ++.++++.|.++  +++|+.++.+ ++.++.+.+.+. ..+.+..++..|+.+...  ..      
T Consensus         3 ~gK~alITGas~G-IG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSG-IGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSH-HHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5677886676654 567777777654  6799999986 566666666554 345555777788765421  11      


Q ss_pred             cCCCccEEEECCCCCC
Q 025211          112 LAGLVDVMVVNPPYVP  127 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~~  127 (256)
                      .-++.|++|.|--...
T Consensus        80 ~~G~iDiLVnnAG~~~   95 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQH   95 (260)
T ss_dssp             HHSCCSEEEECCCCCC
T ss_pred             HhCCCcEEEeeccccc
Confidence            1267999999875443


No 187
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}
Probab=82.93  E-value=1.2  Score=33.47  Aligned_cols=72  Identities=18%  Similarity=0.188  Sum_probs=49.0

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh--cCCCccEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR--LAGLVDVM  119 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~fD~I  119 (256)
                      ++++||=-|.+.| ++.++++.+.+.  +++|+.+|.+++.++..         ..+++..|+.+.....  .-+++|++
T Consensus         3 kgK~~lVTGas~G-IG~aia~~l~~~--Ga~V~~~~r~~~~l~~~---------~~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRG-IGRAVADVLSQE--GAEVTICARNEELLKRS---------GHRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHT---------CSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEECCHHHHHhc---------CCcEEEcchHHHHHHHHHHhCCCcEE
Confidence            5788888886655 677777777654  67999999998765432         2256677776543221  13689999


Q ss_pred             EECCCC
Q 025211          120 VVNPPY  125 (256)
Q Consensus       120 i~npP~  125 (256)
                      |.|--.
T Consensus        71 VnnAG~   76 (234)
T d1o5ia_          71 VLNAGG   76 (234)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998643


No 188
>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=82.68  E-value=7.5  Score=28.77  Aligned_cols=81  Identities=19%  Similarity=0.092  Sum_probs=47.1

Q ss_pred             cccCCCCEEEEecccc--cHHHHHHHHHhcccCCCceEEE-EeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCC
Q 025211           38 LVEHHPVLCMEVGCGS--GYVITSLALMLGQEVPGVQYIA-TDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAG  114 (256)
Q Consensus        38 ~~~~~~~~VLDlGcG~--G~~~~~l~~~l~~~~~~~~v~g-iD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~  114 (256)
                      .++.++.+|-=+|||.  |.........+.+..++.+++| .|.+++..+.+.   +..+.+......|..+...   +.
T Consensus        11 ~~~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~---~~   84 (237)
T d2nvwa1          11 VPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTI---EQLQLKHATGFDSLESFAQ---YK   84 (237)
T ss_dssp             SGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHH---HHTTCTTCEEESCHHHHHH---CT
T ss_pred             CCCCCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHH---Hhcccccceeecchhhccc---cc
Confidence            3445778999999997  3343322222322246778886 688887655443   3344443333455555533   35


Q ss_pred             CccEEEECCC
Q 025211          115 LVDVMVVNPP  124 (256)
Q Consensus       115 ~fD~Ii~npP  124 (256)
                      .+|+|+..-|
T Consensus        85 ~iD~V~i~tp   94 (237)
T d2nvwa1          85 DIDMIVVSVK   94 (237)
T ss_dssp             TCSEEEECSC
T ss_pred             ccceeeccCC
Confidence            7898887543


No 189
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}
Probab=82.51  E-value=5.8  Score=27.40  Aligned_cols=59  Identities=19%  Similarity=0.211  Sum_probs=37.2

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCC
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPP  124 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP  124 (256)
                      |.|..+..+++.|.+.  +..|++.|.+++..+.+.+.    +   -....+..+..     ...|+|++.-|
T Consensus         7 GlG~MG~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~----~---~~~~~~~~e~~-----~~~d~ii~~v~   65 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA----G---AETASTAKAIA-----EQCDVIITMLP   65 (161)
T ss_dssp             CCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----T---CEECSSHHHHH-----HHCSEEEECCS
T ss_pred             ehhHHHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHh----h---hhhcccHHHHH-----hCCCeEEEEcC
Confidence            5566666777776643  56899999999887766542    2   12222333332     35799998654


No 190
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.41  E-value=2.4  Score=32.32  Aligned_cols=82  Identities=15%  Similarity=0.154  Sum_probs=55.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-CCcceEEEcchhhchhh--------hc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-NVHADLINTDIASGLEK--------RL  112 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-~~~~~~~~~d~~~~~~~--------~~  112 (256)
                      +++++|=.|+++| ++.++++.+.++  +++|+.++.+++.++.+.+.+... +........|..+....        ..
T Consensus        13 ~GK~alITGassG-IG~aiA~~la~~--G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          13 QGKKVIVTGASKG-IGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             TTCEEEESSCSSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            6789998898877 567777777654  679999999999988877665443 33335556564432210        11


Q ss_pred             CCCccEEEECCCCC
Q 025211          113 AGLVDVMVVNPPYV  126 (256)
Q Consensus       113 ~~~fD~Ii~npP~~  126 (256)
                      .+..|+++.|-...
T Consensus        90 ~g~~~~li~nag~~  103 (269)
T d1xu9a_          90 MGGLDMLILNHITN  103 (269)
T ss_dssp             HTSCSEEEECCCCC
T ss_pred             hCCccccccccccc
Confidence            36789998876443


No 191
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.28  E-value=7.9  Score=28.79  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=52.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh--cCCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR--LAGLVD  117 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~--~~~~fD  117 (256)
                      .++++|=.|++. .++.++++.+.++  +++|+.+|.+++.++.+.+.+.    ....+..|+.+...  ..  .-+++|
T Consensus         6 ~GK~~lITGas~-GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~g~iD   78 (244)
T d1pr9a_           6 AGRRVLVTGAGK-GIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             TTCEEEEESTTS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCCEEEEeCCCC-HHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHhCCce
Confidence            688999999665 5566777777643  6799999999887776554321    23566777654421  11  126899


Q ss_pred             EEEECCCCCC
Q 025211          118 VMVVNPPYVP  127 (256)
Q Consensus       118 ~Ii~npP~~~  127 (256)
                      ++|.|-....
T Consensus        79 ilVnnAg~~~   88 (244)
T d1pr9a_          79 LLVNNAAVAL   88 (244)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEecccccc
Confidence            9999875543


No 192
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}
Probab=81.46  E-value=5  Score=28.24  Aligned_cols=109  Identities=13%  Similarity=0.095  Sum_probs=62.7

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc-e-EEEcchhhchhhhcCCCccEEEECCCCCCCC
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA-D-LINTDIASGLEKRLAGLVDVMVVNPPYVPTP  129 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~-~-~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~  129 (256)
                      |.|.++..++..|.+.  +.+|++.|.+++.++...++    +... . .-.....+....  -...|.++...|-    
T Consensus         9 GlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~----~~~~~~~~~a~~~~~~~~~--~~~~~~ii~~~~~----   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLAN----EAKGTKVLGAHSLEEMVSK--LKKPRRIILLVKA----   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHT----TTTTSSCEECSSHHHHHHH--BCSSCEEEECSCT----
T ss_pred             eEhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHh----ccccccccchhhhhhhhhh--hcccceEEEecCc----
Confidence            6678888888887754  55899999999888765543    2111 1 111122222111  2456777775431    


Q ss_pred             CcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHH---HHHHHHHHcCCcE
Q 025211          130 EDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPS---QICLQMMEKGYAA  193 (256)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~g~~~  193 (256)
                                         -......+..+...+++|-+++-.  +.....   ++.+.+.+.|...
T Consensus        77 -------------------~~~v~~v~~~l~~~~~~g~iiid~--sT~~~~~~~~~~~~~~~~g~~~  122 (176)
T d2pgda2          77 -------------------GQAVDNFIEKLVPLLDIGDIIIDG--GNSEYRDTMRRCRDLKDKGILF  122 (176)
T ss_dssp             -------------------THHHHHHHHHHHHHCCTTCEEEEC--SCCCHHHHHHHHHHHHHTTCEE
T ss_pred             -------------------hHHHHHHHHHHHhccccCcEEEec--CcchhHHHHHHHHHHHhcCCce
Confidence                               112455677888888888765542  222233   4556666666654


No 193
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=81.23  E-value=7  Score=27.50  Aligned_cols=70  Identities=17%  Similarity=0.155  Sum_probs=39.8

Q ss_pred             EEEEecccc-cHHHHHHHHHhcccCCCceEEEE-eCCHHHHHHHHHHHHHcCCcc-eEEEcchhhchhhhcCCCccEEEE
Q 025211           45 LCMEVGCGS-GYVITSLALMLGQEVPGVQYIAT-DINPYAVEVTRKTLEAHNVHA-DLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        45 ~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~gi-D~~~~~i~~a~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      +|.=+|||. |..   .+..+.. .++..++|+ |.+++..+...   ...+... .-...|+.+.+.   +..+|+|+.
T Consensus         3 ki~iIG~G~~g~~---~~~~l~~-~~~~~i~ai~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~ll~---~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARK---VSRAIHL-APNATISGVASRSLEKAKAFA---TANNYPESTKIHGSYESLLE---DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHH---HHHHHHH-CTTEEEEEEECSSHHHHHHHH---HHTTCCTTCEEESSHHHHHH---CTTCCEEEE
T ss_pred             EEEEEcCCHHHHH---HHHHHHh-CCCCEEEEEEeCCccccccch---hccccccceeecCcHHHhhh---ccccceeee
Confidence            577789985 433   2333321 467788876 88876544333   3444433 234456666543   357899887


Q ss_pred             CCC
Q 025211          122 NPP  124 (256)
Q Consensus       122 npP  124 (256)
                      .-|
T Consensus        73 ~tp   75 (184)
T d1ydwa1          73 PLP   75 (184)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            443


No 194
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.92  E-value=3.3  Score=31.08  Aligned_cols=78  Identities=19%  Similarity=0.199  Sum_probs=51.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh--cCCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR--LAGLVD  117 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~--~~~~fD  117 (256)
                      .++++|=-|++.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+.    ....+..|+.+...  ..  .-+++|
T Consensus         4 ~GK~alITGas~G-IG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~g~iD   76 (242)
T d1cyda_           4 SGLRALVTGAGKG-IGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGGIGPVD   76 (242)
T ss_dssp             TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence            6788898886655 677777777654  6799999999877665544321    23566777765421  11  126899


Q ss_pred             EEEECCCCC
Q 025211          118 VMVVNPPYV  126 (256)
Q Consensus       118 ~Ii~npP~~  126 (256)
                      ++|.|--..
T Consensus        77 ilVnnAg~~   85 (242)
T d1cyda_          77 LLVNNAALV   85 (242)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccc
Confidence            999986543


No 195
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}
Probab=79.35  E-value=3.3  Score=31.47  Aligned_cols=83  Identities=14%  Similarity=0.157  Sum_probs=57.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-HHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------c
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-PYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------L  112 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~  112 (256)
                      +++++|=-|.+.| ++.++++.+.+.  +++|+.++.+ ++..+.+.+.+...+.+...+..|+.+...  ..      .
T Consensus         6 ~gK~alITGas~G-IG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTG-LGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSH-HHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcH-HHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6788888887766 577777777654  6789999976 456777777777766666777888765421  10      1


Q ss_pred             CCCccEEEECCCCCC
Q 025211          113 AGLVDVMVVNPPYVP  127 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~  127 (256)
                      -+++|++|.|.-...
T Consensus        83 ~G~iDiLVnnAG~~~   97 (261)
T d1geea_          83 FGKLDVMINNAGLEN   97 (261)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             hCCCCEeeccceecC
Confidence            268999999875443


No 196
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=79.02  E-value=4.2  Score=30.77  Aligned_cols=80  Identities=19%  Similarity=0.260  Sum_probs=56.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc---ceEEEcchhhchh--hh-----
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH---ADLINTDIASGLE--KR-----  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~---~~~~~~d~~~~~~--~~-----  111 (256)
                      +++.+|=-|++. .++.++++.+.++  +++|+.+|.+++.++.+.+.+...+..   ..++..|+.+...  ..     
T Consensus         4 ~gKvalVTGas~-GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSN-GIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCC-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            567777777665 4566677777654  679999999999999888888776543   2677888754421  10     


Q ss_pred             -cCCCccEEEECCC
Q 025211          112 -LAGLVDVMVVNPP  124 (256)
Q Consensus       112 -~~~~fD~Ii~npP  124 (256)
                       .-+++|++|.|--
T Consensus        81 ~~~g~iDilvnnAG   94 (264)
T d1spxa_          81 GKFGKLDILVNNAG   94 (264)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHhCCCCEeecccc
Confidence             1268999998753


No 197
>d2uyoa1 c.66.1.57 (A:14-310) Putative methyltransferase ML2640 {Mycobacterium leprae [TaxId: 1769]}
Probab=78.36  E-value=13  Score=28.73  Aligned_cols=107  Identities=15%  Similarity=0.099  Sum_probs=65.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--c--eEEEcchhhchhh-hc----
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--A--DLINTDIASGLEK-RL----  112 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~--~~~~~d~~~~~~~-~~----  112 (256)
                      ....|+.+|||-=.-    +..+. ..++..++=+|. |++++.-++.+..++..  .  .++..|+.+.... ..    
T Consensus        89 g~~qvV~LGaGlDTr----~~Rl~-~~~~~~~~EvD~-p~vi~~K~~~l~~~~~~~~~~~~~v~~Dl~~~~~~~L~~~g~  162 (297)
T d2uyoa1          89 GIRQFVILASGLDSR----AYRLD-WPTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGF  162 (297)
T ss_dssp             TCCEEEEETCTTCCH----HHHSC-CCTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTC
T ss_pred             CCCeEEEeCcccCCh----hhhcC-CCcCceEEEcCC-hHHHHHHHHHHHhcCCCCCceEEEecccccchHHHHHHhcCC
Confidence            456777899998874    33442 135677888884 88888777777776542  2  6666676643221 11    


Q ss_pred             -CCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          113 -AGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       113 -~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                       .+..=++++-..+...+                   ......+++.+.+...||+.+++-.
T Consensus       163 d~~~ptl~i~EGvl~YL~-------------------~~~~~~ll~~i~~~~~~GS~l~~d~  205 (297)
T d2uyoa1         163 DPSARTAWLAEGLLMYLP-------------------ATAQDGLFTEIGGLSAVGSRIAVET  205 (297)
T ss_dssp             CTTSCEEEEECSCGGGSC-------------------HHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCCCEEEEEccccccCC-------------------HHHHHHHHHHHHHhCCCCCEEEEEe
Confidence             12334444432221111                   2336789999999999999998854


No 198
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=78.28  E-value=2  Score=27.03  Aligned_cols=61  Identities=15%  Similarity=0.095  Sum_probs=35.1

Q ss_pred             ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEc-chhhchhhhcCCCccEEEECCCCC
Q 025211           51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINT-DIASGLEKRLAGLVDVMVVNPPYV  126 (256)
Q Consensus        51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~fD~Ii~npP~~  126 (256)
                      ||+|.-++  |+.|.+  .+..|+|.|..+...   .+.+...|++  +..+ +....      ...|+||..+..-
T Consensus        10 gG~GMs~L--A~~L~~--~G~~VsGSD~~~~~~---t~~L~~~Gi~--i~~gh~~~~i------~~~d~vV~SsAI~   71 (89)
T d1j6ua1          10 GGIGMSAV--ALHEFS--NGNDVYGSNIEETER---TAYLRKLGIP--IFVPHSADNW------YDPDLVIKTPAVR   71 (89)
T ss_dssp             TSHHHHHH--HHHHHH--TTCEEEEECSSCCHH---HHHHHHTTCC--EESSCCTTSC------CCCSEEEECTTCC
T ss_pred             CHHHHHHH--HHHHHh--CCCeEEEEeCCCChh---HHHHHHCCCe--EEeeeccccc------CCCCEEEEecCcC
Confidence            45666553  455543  367999999886322   2235666654  3322 21111      3579999977653


No 199
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.25  E-value=3.9  Score=30.81  Aligned_cols=82  Identities=20%  Similarity=0.195  Sum_probs=55.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC--CcceEEEcchhhchh--hh------
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN--VHADLINTDIASGLE--KR------  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~--~~~~~~~~d~~~~~~--~~------  111 (256)
                      .|+.+|=-|++.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+....  ....++..|+.+...  ..      
T Consensus         2 ~GKvalITGas~G-IG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQG-IGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            4678888886654 577788877654  6799999999998887776654332  223677788765421  10      


Q ss_pred             cCCCccEEEECCCCC
Q 025211          112 LAGLVDVMVVNPPYV  126 (256)
Q Consensus       112 ~~~~fD~Ii~npP~~  126 (256)
                      .-+++|++|.|-...
T Consensus        79 ~~G~iDilVnnAg~~   93 (254)
T d2gdza1          79 HFGRLDILVNNAGVN   93 (254)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCcCeeccccccc
Confidence            126899999986554


No 200
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}
Probab=78.22  E-value=4.6  Score=30.51  Aligned_cols=80  Identities=18%  Similarity=0.215  Sum_probs=54.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc--ceEEEcchhhchh--hh------
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH--ADLINTDIASGLE--KR------  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~--~~~~~~d~~~~~~--~~------  111 (256)
                      +++++|=-|++.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+...+..  ...+..|+.+...  ..      
T Consensus         3 ~gK~alITGas~G-IG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSG-LGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            5678888887655 466667776644  679999999999988877776655433  3567778755421  10      


Q ss_pred             cCCCccEEEECCC
Q 025211          112 LAGLVDVMVVNPP  124 (256)
Q Consensus       112 ~~~~fD~Ii~npP  124 (256)
                      .-+++|++|.|--
T Consensus        80 ~~G~iDiLVnnAG   92 (258)
T d1iy8a_          80 RFGRIDGFFNNAG   92 (258)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HhCCCCEEEECCc
Confidence            1268999998854


No 201
>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}
Probab=78.02  E-value=9  Score=28.69  Aligned_cols=84  Identities=14%  Similarity=0.127  Sum_probs=53.5

Q ss_pred             CCCEEEEecccc-cHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------h--hc
Q 025211           42 HPVLCMEVGCGS-GYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------K--RL  112 (256)
Q Consensus        42 ~~~~VLDlGcG~-G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~--~~  112 (256)
                      +++++|=.|.+. -.++.++++.|.++  +++|+.++.+++..+.+++-... +-...+...|+.+...      .  ..
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhh-CCceeEeeecccchhhHHHHHHHHHHH
Confidence            578899888743 35777788887743  77999999987655555544333 3333555555543321      0  11


Q ss_pred             CCCccEEEECCCCCCC
Q 025211          113 AGLVDVMVVNPPYVPT  128 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~~  128 (256)
                      -+.+|+++.|..+...
T Consensus        81 ~g~id~lV~nag~~~~   96 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPK   96 (274)
T ss_dssp             TSCEEEEEECCCCCCG
T ss_pred             cCCCCeEEeecccccc
Confidence            3789999998765543


No 202
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=77.88  E-value=1.5  Score=31.68  Aligned_cols=34  Identities=35%  Similarity=0.460  Sum_probs=27.0

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      |.|.+++.+|..+.+   +..|+|+|++++.++..+.
T Consensus         7 GlG~vGl~~a~~~a~---g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           7 GSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             CCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHT
T ss_pred             CCChhHHHHHHHHHC---CCcEEEEECCHHHHHHHhh
Confidence            678888888876642   5699999999998887653


No 203
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=77.18  E-value=5.5  Score=27.59  Aligned_cols=103  Identities=16%  Similarity=0.119  Sum_probs=58.1

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCc
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPED  131 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~  131 (256)
                      |.|..+..+++.|.+.  +..|++.|.++...+.+...    +   .....+..+..     ...|+|+...|..     
T Consensus         8 GlG~MG~~iA~~L~~~--g~~v~~~d~~~~~~~~~~~~----~---~~~~~~~~e~~-----~~~diii~~v~~~-----   68 (162)
T d3cuma2           8 GLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA----G---ASAARSARDAV-----QGADVVISMLPAS-----   68 (162)
T ss_dssp             CCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT----T---CEECSSHHHHH-----TSCSEEEECCSCH-----
T ss_pred             EEHHHHHHHHHHHHHC--CCeEEEEECchhhhhhhhhh----h---ccccchhhhhc-----cccCeeeecccch-----
Confidence            5566666677777654  45899999998877655432    1   22223333332     4579998865531     


Q ss_pred             ccccccchhhhcCCCCcHHHHHHHHHH---HhhccccCeEEEEEEeCCCCHH---HHHHHHHHcCCcE
Q 025211          132 EVGREGIASAWAGGENGRAVIDKILPS---ADKLLSKRGWLYLVTLTANDPS---QICLQMMEKGYAA  193 (256)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~g~~~  193 (256)
                                        .....++..   +...+++|-+++-  .+...++   ++.+.+.+.|...
T Consensus        69 ------------------~~~~~v~~~~~~~~~~l~~g~iiid--~st~~p~~~~~~~~~~~~~gi~~  116 (162)
T d3cuma2          69 ------------------QHVEGLYLDDDGLLAHIAPGTLVLE--CSTIAPTSARKIHAAARERGLAM  116 (162)
T ss_dssp             ------------------HHHHHHHHSTTCHHHHSCTTCEEEE--CSCCCHHHHHHHHHHHHHTTCEE
T ss_pred             ------------------hhHHHHHhccccccccCCCCCEEEE--CCCCCHHHHHHHHHHHHHCCCcE
Confidence                              112333332   4555777765542  3333333   5666666766543


No 204
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}
Probab=75.02  E-value=9.4  Score=26.31  Aligned_cols=68  Identities=18%  Similarity=0.194  Sum_probs=37.3

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      .+|.=+|||.-.-.. ....+. ..++..+..+|.+++..+...+..   +..  ....|+.+.+.    ..+|+|+..
T Consensus         2 irvgiiG~G~~~~~~-~~~~l~-~~~~~~~~~~d~~~~~~~~~~~~~---~~~--~~~~~~~~ll~----~~iD~V~I~   69 (167)
T d1xeaa1           2 LKIAMIGLGDIAQKA-YLPVLA-QWPDIELVLCTRNPKVLGTLATRY---RVS--ATCTDYRDVLQ----YGVDAVMIH   69 (167)
T ss_dssp             EEEEEECCCHHHHHT-HHHHHT-TSTTEEEEEECSCHHHHHHHHHHT---TCC--CCCSSTTGGGG----GCCSEEEEC
T ss_pred             eEEEEEcCCHHHHHH-HHHHHH-hCCCcEEEEEECCHHHHHHHHHhc---ccc--cccccHHHhcc----cccceeccc
Confidence            357778887422110 122222 256778889999988776655432   222  12245555432    358987763


No 205
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}
Probab=74.31  E-value=1.8  Score=31.26  Aligned_cols=103  Identities=17%  Similarity=0.135  Sum_probs=62.4

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-------C-Ccc--------eEEEcchhh
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-------N-VHA--------DLINTDIAS  106 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-------~-~~~--------~~~~~d~~~  106 (256)
                      -++|-=+|+|  .++..++..+..  .+..|+.+|.+++.++.+.+++...       + ...        .+......+
T Consensus         4 I~~vaViGaG--~mG~~iA~~~a~--~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~   79 (186)
T d1wdka3           4 VKQAAVLGAG--IMGGGIAYQSAS--KGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYG   79 (186)
T ss_dssp             CSSEEEECCH--HHHHHHHHHHHH--TTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSST
T ss_pred             CCEEEEECcC--HHHHHHHHHHHh--CCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccccc
Confidence            3557777775  444444544432  3678999999999998887765432       1 110        111111111


Q ss_pred             chhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211          107 GLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA  176 (256)
Q Consensus       107 ~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  176 (256)
                      .     -...|+|+-.-|                      ...+....++.++.+++.++-++.-.+.+.
T Consensus        80 ~-----~~~adlViEav~----------------------E~l~~K~~lf~~l~~~~~~~~IiaSnTS~l  122 (186)
T d1wdka3          80 D-----FGNVDLVVEAVV----------------------ENPKVKQAVLAEVENHVREDAILASNTSTI  122 (186)
T ss_dssp             T-----GGGCSEEEECCC----------------------SCHHHHHHHHHHHHTTSCTTCEEEECCSSS
T ss_pred             c-----ccccceeeeeec----------------------chHHHHHHHHHHHHhhcCCCeeEEeccccc
Confidence            1     135688887544                      234567789999999999998887654433


No 206
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}
Probab=73.96  E-value=4  Score=30.58  Aligned_cols=77  Identities=17%  Similarity=0.225  Sum_probs=52.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++++|=-|++.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+     ....+..|+.+...  ..      .-
T Consensus         4 ~gK~~lITGas~G-IG~aia~~l~~~--G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           4 KDKAVLITGAAHG-IGRATLELFAKE--GARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            5788888888776 677778877654  679999999998877665432     34667777654421  10      11


Q ss_pred             CCccEEEECCCCC
Q 025211          114 GLVDVMVVNPPYV  126 (256)
Q Consensus       114 ~~fD~Ii~npP~~  126 (256)
                      +++|++|.|--..
T Consensus        76 g~iDilVnnAG~~   88 (242)
T d1ulsa_          76 GRLDGVVHYAGIT   88 (242)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCceEEEECCccc
Confidence            6799999886443


No 207
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.63  E-value=7.9  Score=29.84  Aligned_cols=82  Identities=15%  Similarity=0.127  Sum_probs=56.3

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-----CcceEEEcchhhchh--hh---
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-----VHADLINTDIASGLE--KR---  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~---  111 (256)
                      +++++|=-|++.| ++.++++.+.+.  +++|+.+|.+++.++.+.+.+....     .....+..|+.+...  ..   
T Consensus        11 ~gKvalITGas~G-IG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1          11 QGQVAIVTGGATG-IGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            6788888886655 677777777654  6799999999998887777665432     223667778765421  10   


Q ss_pred             ---cCCCccEEEECCCCC
Q 025211          112 ---LAGLVDVMVVNPPYV  126 (256)
Q Consensus       112 ---~~~~fD~Ii~npP~~  126 (256)
                         .-++.|++|.|....
T Consensus        88 ~~~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCeEEEEeecccc
Confidence               126799999986543


No 208
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=73.40  E-value=9.3  Score=24.77  Aligned_cols=52  Identities=10%  Similarity=0.051  Sum_probs=38.1

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP  123 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np  123 (256)
                      +|.-+|-++...+..+..+...|........+..+.+.......||+|+++.
T Consensus         3 rILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~   54 (118)
T d1u0sy_           3 RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDI   54 (118)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEec
Confidence            7889999999999999988887765432345665555444446899999963


No 209
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=73.33  E-value=4.7  Score=25.55  Aligned_cols=70  Identities=21%  Similarity=0.186  Sum_probs=40.0

Q ss_pred             CCCEEEEec-ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           42 HPVLCMEVG-CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        42 ~~~~VLDlG-cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      ..++|.=+| ||+|.-++  |+.|.++  +..|+|.|......-   +.+...|.  .+..+...+..     ...|+||
T Consensus         7 ~~~~ihfiGigG~GMs~L--A~~L~~~--G~~VsGSD~~~~~~~---~~L~~~Gi--~v~~g~~~~~i-----~~~d~vV   72 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGI--AEILLNE--GYQISGSDIADGVVT---QRLAQAGA--KIYIGHAEEHI-----EGASVVV   72 (96)
T ss_dssp             TCCEEEEETTTSTTHHHH--HHHHHHH--TCEEEEEESCCSHHH---HHHHHTTC--EEEESCCGGGG-----TTCSEEE
T ss_pred             hCCEEEEEEECHHHHHHH--HHHHHhC--CCEEEEEeCCCChhh---hHHHHCCC--eEEECCccccC-----CCCCEEE
Confidence            567788886 45776553  4444433  679999998632211   22333454  34444433322     3579999


Q ss_pred             ECCCC
Q 025211          121 VNPPY  125 (256)
Q Consensus       121 ~npP~  125 (256)
                      ..+..
T Consensus        73 ~S~AI   77 (96)
T d1p3da1          73 VSSAI   77 (96)
T ss_dssp             ECTTS
T ss_pred             ECCCc
Confidence            87654


No 210
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.23  E-value=2.8  Score=27.83  Aligned_cols=52  Identities=15%  Similarity=0.256  Sum_probs=37.8

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH--------HHHHHHHHHHHHcCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP--------YAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~--------~~i~~a~~~~~~~~~~~   97 (256)
                      .+++++=+  |.|.+++++|..+.+.  +..|+-++..+        ++.+.+++.+..+|++.
T Consensus        22 ~p~~~vIi--G~G~ig~E~A~~l~~l--G~~Vtii~~~~~~l~~~d~ei~~~l~~~l~~~GV~i   81 (122)
T d1v59a2          22 IPKRLTII--GGGIIGLEMGSVYSRL--GSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDF   81 (122)
T ss_dssp             CCSEEEEE--CCSHHHHHHHHHHHHT--TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEE
T ss_pred             CCCeEEEE--CCCchHHHHHHHHHhh--CcceeEEEeccccchhhhhhhHHHHHHHHHhccceE
Confidence            45677666  5567777788877654  56788887654        78888888898888754


No 211
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=73.04  E-value=3.6  Score=32.87  Aligned_cols=76  Identities=17%  Similarity=-0.001  Sum_probs=44.4

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH-----------------HHHHHHcCCcceEEEcchh
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT-----------------RKTLEAHNVHADLINTDIA  105 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a-----------------~~~~~~~~~~~~~~~~d~~  105 (256)
                      |++||=.|. +|.++-.++..|.++  +..|+++|.-.......                 ..--...+...+++.+|+.
T Consensus         1 g~kILVTGa-tGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~   77 (393)
T d1i24a_           1 GSRVMVIGG-DGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   77 (393)
T ss_dssp             -CEEEEETT-TSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             CCEEEEECC-CcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCC
Confidence            467777765 999999998888764  46899999432211111                 1111112333488999987


Q ss_pred             hchh--h-hcCCCccEEEE
Q 025211          106 SGLE--K-RLAGLVDVMVV  121 (256)
Q Consensus       106 ~~~~--~-~~~~~fD~Ii~  121 (256)
                      +...  . +....+|.|+=
T Consensus        78 d~~~l~~~~~~~~~d~ViH   96 (393)
T d1i24a_          78 DFEFLAESFKSFEPDSVVH   96 (393)
T ss_dssp             SHHHHHHHHHHHCCSEEEE
T ss_pred             CHHHHHHHHHhhcchheec
Confidence            5421  1 11236798864


No 212
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=72.99  E-value=4.2  Score=30.56  Aligned_cols=80  Identities=18%  Similarity=0.156  Sum_probs=54.3

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh--cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR--LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~--~~  113 (256)
                      +++++|=-|++.| ++.++++.+.++  +++|+.+|.+++.++.+.+.+.   -...++..|+.+...      ..  .-
T Consensus         5 ~gK~alITGas~G-IG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           5 TGKVALVSGGARG-MGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            6788888887765 577777777654  6799999999988776655442   233677778755421      10  12


Q ss_pred             CCccEEEECCCCCC
Q 025211          114 GLVDVMVVNPPYVP  127 (256)
Q Consensus       114 ~~fD~Ii~npP~~~  127 (256)
                      +.+|+++.|.....
T Consensus        79 g~idilinnAG~~~   92 (244)
T d1nffa_          79 GGLHVLVNNAGILN   92 (244)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCeEEEECCcccC
Confidence            67999999876543


No 213
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}
Probab=72.93  E-value=15  Score=27.03  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=50.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h----h--cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K----R--LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~----~--~~  113 (256)
                      .++++|=.|++.| ++.++++.+.++  +++|+..+.+.+.++...+   ..+-+..++..|+.+...  .    .  .-
T Consensus         4 ~gK~alItGas~G-IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           4 SGKTILVTGAASG-IGRAALDLFARE--GASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTCEEEEESTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            5788888887754 566677776643  6799999999886654433   334444667788754421  1    0  11


Q ss_pred             CCccEEEECCC
Q 025211          114 GLVDVMVVNPP  124 (256)
Q Consensus       114 ~~fD~Ii~npP  124 (256)
                      +++|++|.|-.
T Consensus        78 g~iDiLinnAg   88 (241)
T d2a4ka1          78 GRLHGVAHFAG   88 (241)
T ss_dssp             SCCCEEEEGGG
T ss_pred             CCccEeccccc
Confidence            67999999753


No 214
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=70.42  E-value=12  Score=24.66  Aligned_cols=54  Identities=7%  Similarity=0.019  Sum_probs=38.1

Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211           70 GVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP  123 (256)
Q Consensus        70 ~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np  123 (256)
                      ..+|..+|-++...+..++.+...|...-....|..+...-....+||+|+++.
T Consensus         6 ~~kILiVDD~~~~~~~l~~~L~~~g~~~v~~a~~~~~al~~l~~~~~dlii~D~   59 (129)
T d1p6qa_           6 KIKVLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMKIMAQNPHHLVISDF   59 (129)
T ss_dssp             CCCEEEECSSHHHHHHHHHHHHTTTCSCEECCSSHHHHHHHHHTSCCSEEEECS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhCCCCeEEeee
Confidence            357999999999999988888877764212234555554444457899999963


No 215
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}
Probab=70.28  E-value=5.1  Score=25.89  Aligned_cols=69  Identities=14%  Similarity=0.122  Sum_probs=37.4

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEe--CCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCcc
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATD--INPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVD  117 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD--~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD  117 (256)
                      .-.+++||=+|.|.=.  ...++.+.+.  ++.|+.++  .+++....+.+    .  ..+++...+.+..  +  ..++
T Consensus         9 ~l~~k~vlVvG~G~va--~~ka~~ll~~--ga~v~v~~~~~~~~~~~~~~~----~--~i~~~~~~~~~~d--l--~~~~   74 (113)
T d1pjqa1           9 QLRDRDCLIVGGGDVA--ERKARLLLEA--GARLTVNALTFIPQFTVWANE----G--MLTLVEGPFDETL--L--DSCW   74 (113)
T ss_dssp             CCBTCEEEEECCSHHH--HHHHHHHHHT--TBEEEEEESSCCHHHHHHHTT----T--SCEEEESSCCGGG--G--TTCS
T ss_pred             EeCCCEEEEECCCHHH--HHHHHHHHHC--CCeEEEEeccCChHHHHHHhc----C--CceeeccCCCHHH--h--CCCc
Confidence            3478999999887643  3445555433  45555554  55554443321    1  2255554443321  1  4678


Q ss_pred             EEEEC
Q 025211          118 VMVVN  122 (256)
Q Consensus       118 ~Ii~n  122 (256)
                      +|++.
T Consensus        75 lv~~a   79 (113)
T d1pjqa1          75 LAIAA   79 (113)
T ss_dssp             EEEEC
T ss_pred             EEeec
Confidence            88874


No 216
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}
Probab=70.14  E-value=2.9  Score=30.18  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=33.9

Q ss_pred             CCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211           41 HHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT   89 (256)
Q Consensus        41 ~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~   89 (256)
                      -++.+|+=+|+|.- ..++..|..+     ++.|+++|+++..++..+..
T Consensus        27 V~pa~VvViGaGvaG~~Aa~~A~~l-----GA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          27 VPPARVLVFGVGVAGLQAIATAKRL-----GAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             ECCCEEEEECCSHHHHHHHHHHHHT-----TCEEEEECSCSTTHHHHHHT
T ss_pred             cCCcEEEEEcCcHHHHHHHHHHHHc-----CCEEEEEeccHHHHHHHHHh
Confidence            36789999999964 5555555543     57999999999988877654


No 217
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}
Probab=68.90  E-value=5.1  Score=30.21  Aligned_cols=80  Identities=16%  Similarity=0.088  Sum_probs=53.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++++|=-|.+.| ++.++++.+.++  +++|+.+|.+++.++...+.   .+-...++..|+.+...  ..      .-
T Consensus         4 ~gK~alVTGas~G-IG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           4 SGKTVIITGGARG-LGAEAARQAVAA--GARVVLADVLDEEGAATARE---LGDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCSEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHT---TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHH---hCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            6788888888766 566677777654  67999999998876654433   23234777888764421  10      12


Q ss_pred             CCccEEEECCCCCC
Q 025211          114 GLVDVMVVNPPYVP  127 (256)
Q Consensus       114 ~~fD~Ii~npP~~~  127 (256)
                      +++|++|.|--...
T Consensus        78 g~iDilVnnAg~~~   91 (254)
T d1hdca_          78 GSVDGLVNNAGIST   91 (254)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCccEEEecCcccc
Confidence            68999998875443


No 218
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=68.45  E-value=2.9  Score=29.77  Aligned_cols=89  Identities=10%  Similarity=0.128  Sum_probs=47.0

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC-Cc----c-eEE-EcchhhchhhhcCCCccEEEECCC
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN-VH----A-DLI-NTDIASGLEKRLAGLVDVMVVNPP  124 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~-~~----~-~~~-~~d~~~~~~~~~~~~fD~Ii~npP  124 (256)
                      |.|.++.+++..|...+.+..+++-+.+++.++...++- .+. ..    . .+. ..|+.+.     -...|+|+.--|
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~-----~~~ad~Ii~avp   80 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGR-EHPRLGVKLNGVEIFWPEQLEKC-----LENAEVVLLGVS   80 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTC-CBTTTTBCCCSEEEECGGGHHHH-----HTTCSEEEECSC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhh-hhhhhcchhccccccccccHHHH-----Hhccchhhcccc
Confidence            445666667777665454455566566776655443221 111 11    1 111 1122221     145799987544


Q ss_pred             CCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEE
Q 025211          125 YVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLY  170 (256)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  170 (256)
                      -                        .....+++++...++++-+++
T Consensus        81 s------------------------~~~~~~~~~l~~~l~~~~ii~  102 (180)
T d1txga2          81 T------------------------DGVLPVMSRILPYLKDQYIVL  102 (180)
T ss_dssp             G------------------------GGHHHHHHHHTTTCCSCEEEE
T ss_pred             h------------------------hhhHHHHHhhccccccceecc
Confidence            2                        115788888888887764444


No 219
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=67.55  E-value=4.6  Score=26.56  Aligned_cols=51  Identities=16%  Similarity=0.242  Sum_probs=38.5

Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           71 VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        71 ~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      .+|..+|-++...+..+..+...|.... ...+..+.+.......||+|+++
T Consensus         2 irILiVdDd~~~~~~l~~~L~~~g~~v~-~a~~~~~al~~l~~~~~dlillD   52 (122)
T d1kgsa2           2 VRVLVVEDERDLADLITEALKKEMFTVD-VCYDGEEGMYMALNEPFDVVILD   52 (122)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEEE
T ss_pred             CEEEEEeCCHHHHHHHHHHHHHCCCEEE-EEcchHHHHHHHHhhCccccccc
Confidence            4788999999999999999888777643 34555555544445789999996


No 220
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}
Probab=67.02  E-value=16  Score=24.82  Aligned_cols=114  Identities=13%  Similarity=0.166  Sum_probs=56.4

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHH-HHHHHHH--cCCcceEEEcchhhchhhhcCCCccEE
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEV-TRKTLEA--HNVHADLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~-a~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      ..+|.=+|+  |.++..++..+..+.-...++.+|++++..+. +.+.-..  .........+|..+.      ...|+|
T Consensus         5 ~~KI~IIGa--G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~------~~adiv   76 (146)
T d1ez4a1           5 HQKVVLVGD--GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDC------KDADLV   76 (146)
T ss_dssp             BCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGG------TTCSEE
T ss_pred             CCEEEEECC--CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHh------ccccEE
Confidence            456777886  55666666665544434589999999875432 2211110  111125556665443      457999


Q ss_pred             EECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEE
Q 025211          120 VVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVT  173 (256)
Q Consensus       120 i~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (256)
                      +..-.....+...  +.+...      ........+...+.+ -.|++++++++
T Consensus        77 vitag~~~~~g~~--r~~l~~------~N~~i~~~~~~~i~~-~~p~aivivvt  121 (146)
T d1ez4a1          77 VITAGAPQKPGES--RLDLVN------KNLNILSSIVKPVVD-SGFDGIFLVAA  121 (146)
T ss_dssp             EECCCC------------CHH------HHHHHHHHHHHHHHH-TTCCSEEEECS
T ss_pred             EEecccccCCCCC--HHHHHH------HHHHHHHHHHHHHhh-cCCCcEEEEeC
Confidence            8843221111110  000000      001134455555554 47899988855


No 221
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}
Probab=66.85  E-value=8.1  Score=28.77  Aligned_cols=82  Identities=17%  Similarity=0.096  Sum_probs=54.0

Q ss_pred             CCCCEEEEeccccc-HHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------
Q 025211           41 HHPVLCMEVGCGSG-YVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G-~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------  111 (256)
                      -+++++|=-|++++ .++.++++.|.++  +++|+..+.++...+.+.+.....+ ...++..|+.+...  ..      
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHhhhccC-cccccccccCCHHHHHHHHHHHHH
Confidence            46899999997653 3677777777654  6789999998877776665544433 33566777654321  00      


Q ss_pred             cCCCccEEEECCCC
Q 025211          112 LAGLVDVMVVNPPY  125 (256)
Q Consensus       112 ~~~~fD~Ii~npP~  125 (256)
                      .-++.|++|.|--+
T Consensus        83 ~~g~iDilVnnag~   96 (256)
T d1ulua_          83 AFGGLDYLVHAIAF   96 (256)
T ss_dssp             HHSSEEEEEECCCC
T ss_pred             hcCCceEEEecccc
Confidence            12679999987544


No 222
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}
Probab=66.85  E-value=7.6  Score=28.96  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=52.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      +++.+|=-|.+ +.++.++++.+.++  +++|+..|.++.  +.+...++..+-+...+..|+.+...  ..      .-
T Consensus         4 ~gKvalVTGas-~GIG~aia~~la~~--Ga~V~~~~~~~~--~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           4 KDKLAVITGGA-NGIGRAIAERFAVE--GADIAIADLVPA--PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCch--HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            57888877755 45567777777654  678999998764  23344455556555777888765421  10      12


Q ss_pred             CCccEEEECCCCCC
Q 025211          114 GLVDVMVVNPPYVP  127 (256)
Q Consensus       114 ~~fD~Ii~npP~~~  127 (256)
                      +++|++|.|--...
T Consensus        79 G~iDilVnnAG~~~   92 (247)
T d2ew8a1          79 GRCDILVNNAGIYP   92 (247)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            68999999865543


No 223
>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.07  E-value=1.5  Score=33.21  Aligned_cols=80  Identities=19%  Similarity=0.189  Sum_probs=49.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhc--hhh--hcCCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASG--LEK--RLAGLVD  117 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~--~~~--~~~~~fD  117 (256)
                      +++++|=.|++ +.++.++++.+.++  +++|+.+|.+++.++...+.     ........|+...  ...  ..-+..|
T Consensus         5 ~gK~alITGas-~GIG~aia~~la~~--G~~Vi~~~r~~~~l~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~id   76 (245)
T d2ag5a1           5 DGKVIILTAAA-QGIGQAAALAFARE--GAKVIATDINESKLQELEKY-----PGIQTRVLDVTKKKQIDQFANEVERLD   76 (245)
T ss_dssp             TTCEEEESSTT-SHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGS-----TTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCC-CHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc-----cCCceeeeeccccccccccccccccce
Confidence            67888888854 55677778877654  67999999998776543321     1223444443221  111  1136799


Q ss_pred             EEEECCCCCCCC
Q 025211          118 VMVVNPPYVPTP  129 (256)
Q Consensus       118 ~Ii~npP~~~~~  129 (256)
                      .+|.|..+....
T Consensus        77 ~lVn~ag~~~~~   88 (245)
T d2ag5a1          77 VLFNVAGFVHHG   88 (245)
T ss_dssp             EEEECCCCCCCB
T ss_pred             eEEecccccCCC
Confidence            999987665443


No 224
>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}
Probab=65.93  E-value=13  Score=23.46  Aligned_cols=44  Identities=9%  Similarity=-0.110  Sum_probs=34.8

Q ss_pred             HHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEec
Q 025211          156 LPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQR  199 (256)
Q Consensus       156 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  199 (256)
                      +....+-|++|.++.+..........+.+++...|+.+..+...
T Consensus        43 ~kkal~~l~~Ge~L~V~~dd~~a~~dI~~~~~~~g~~i~~~~~~   86 (98)
T d1jdqa_          43 TKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEV   86 (98)
T ss_dssp             HHHHHHTCCTTCEEEEEESSCTHHHHHHHHHHHSSCCEEEEEEC
T ss_pred             HHHHHHcCCCCCEEEEEeCCcchHHHHHHHHHHcCCEEEEEEEc
Confidence            45566779999998887777777789999999999987665544


No 225
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=64.29  E-value=16  Score=24.22  Aligned_cols=51  Identities=16%  Similarity=0.169  Sum_probs=37.5

Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           71 VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        71 ~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      ++|..+|-++...+..+..+...|... ....+..+.+.......+|+|+++
T Consensus         2 arILiVDD~~~~~~~l~~~L~~~g~~v-~~a~~~~eal~~~~~~~~dlil~D   52 (139)
T d1w25a1           2 ARILVVDDIEANVRLLEAKLTAEYYEV-STAMDGPTALAMAARDLPDIILLD   52 (139)
T ss_dssp             CEEEEECSSTTHHHHHHHHHHHTTCEE-EEESSHHHHHHHHHHHCCSEEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEE-EEEccchhhhhhhhcccceeeeee
Confidence            478899999999999999888877653 344555555543334679999996


No 226
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}
Probab=64.03  E-value=17  Score=25.29  Aligned_cols=75  Identities=9%  Similarity=0.016  Sum_probs=45.1

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      .++++|+=+|+|.-.-++..+.  .+ . ..+++-+.-+.+..+...+++...+   .+......+.    ....+|+||
T Consensus        16 ~~~k~vlIlGaGGaarai~~aL--~~-~-~~~i~I~nR~~~~a~~l~~~~~~~~---~~~~~~~~~~----~~~~~diiI   84 (171)
T d1p77a1          16 RPNQHVLILGAGGATKGVLLPL--LQ-A-QQNIVLANRTFSKTKELAERFQPYG---NIQAVSMDSI----PLQTYDLVI   84 (171)
T ss_dssp             CTTCEEEEECCSHHHHTTHHHH--HH-T-TCEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGGGC----CCSCCSEEE
T ss_pred             CCCCEEEEECCcHHHHHHHHHH--cc-c-CceeeeccchHHHHHHHHHHHhhcc---ccchhhhccc----cccccceee
Confidence            4788999999987665443332  22 2 3488888888877776666654322   2222222121    135799999


Q ss_pred             ECCCCC
Q 025211          121 VNPPYV  126 (256)
Q Consensus       121 ~npP~~  126 (256)
                      ..-|..
T Consensus        85 N~tp~g   90 (171)
T d1p77a1          85 NATSAG   90 (171)
T ss_dssp             ECCCC-
T ss_pred             eccccc
Confidence            877654


No 227
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=64.01  E-value=11  Score=28.98  Aligned_cols=82  Identities=18%  Similarity=0.290  Sum_probs=46.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH---------HHHHHHHHHHHHcCCcceEEEcchhhc---hh
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP---------YAVEVTRKTLEAHNVHADLINTDIASG---LE  109 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~---------~~i~~a~~~~~~~~~~~~~~~~d~~~~---~~  109 (256)
                      +++++|=-|++.| ++.++++.|.++  +++|+..|.+.         ..++...+.+...+........|..+.   ..
T Consensus         6 ~gKvalITGas~G-IG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGG-LGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSH-HHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            6788888888877 466677777654  67899888653         334444444443333222222222111   11


Q ss_pred             h--hcCCCccEEEECCCCC
Q 025211          110 K--RLAGLVDVMVVNPPYV  126 (256)
Q Consensus       110 ~--~~~~~fD~Ii~npP~~  126 (256)
                      .  ..-+++|++|.|--..
T Consensus        83 ~~~~~~G~iDiLVnNAGi~  101 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGIL  101 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCccC
Confidence            1  0137899999986544


No 228
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}
Probab=63.94  E-value=3.6  Score=29.04  Aligned_cols=126  Identities=15%  Similarity=0.083  Sum_probs=64.7

Q ss_pred             HHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchh
Q 025211           26 ALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIA  105 (256)
Q Consensus        26 ~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~  105 (256)
                      -+++.+...-.-+  -.+++|+=+|-|.-  +.-+|+.++  .-+++|+.+|++|-.  ..+...  .    -+....+.
T Consensus         8 S~~d~i~r~t~~~--laGk~vvV~GYG~v--GrG~A~~~r--g~Ga~V~V~E~DPi~--alqA~m--d----Gf~v~~~~   73 (163)
T d1v8ba1           8 SLPDGLMRATDFL--ISGKIVVICGYGDV--GKGCASSMK--GLGARVYITEIDPIC--AIQAVM--E----GFNVVTLD   73 (163)
T ss_dssp             HHHHHHHHHHCCC--CTTSEEEEECCSHH--HHHHHHHHH--HHTCEEEEECSCHHH--HHHHHT--T----TCEECCHH
T ss_pred             hHHHHHHHHhCce--ecCCEEEEeccccc--chhHHHHHH--hCCCEEEEEecCchh--hHHHHh--c----CCccCchh
Confidence            3445444433221  36788888776543  333444443  236799999999944  333322  1    23334444


Q ss_pred             hchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHH
Q 025211          106 SGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQ  185 (256)
Q Consensus       106 ~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~  185 (256)
                      +..     ..-|++++--.-                          ..-+-.+..+.+|+|.++.-+.+ ++.+.++...
T Consensus        74 ~a~-----~~aDi~vTaTGn--------------------------~~vI~~~h~~~MKdgaIl~N~GH-fd~EIdv~~L  121 (163)
T d1v8ba1          74 EIV-----DKGDFFITCTGN--------------------------VDVIKLEHLLKMKNNAVVGNIGH-FDDEIQVNEL  121 (163)
T ss_dssp             HHT-----TTCSEEEECCSS--------------------------SSSBCHHHHTTCCTTCEEEECSS-TTTSBCHHHH
T ss_pred             Hcc-----ccCcEEEEcCCC--------------------------CccccHHHHHHhhCCeEEEeccc-cchhhhhHHH
Confidence            442     457999983211                          01112334567899988886433 3333333333


Q ss_pred             HHHcCCcEEEEE
Q 025211          186 MMEKGYAARIVV  197 (256)
Q Consensus       186 ~~~~g~~~~~~~  197 (256)
                      ......+...+.
T Consensus       122 ~~~~~~~~~~vr  133 (163)
T d1v8ba1         122 FNYKGIHIENVK  133 (163)
T ss_dssp             HTSTTCEEEEEE
T ss_pred             HhCcCcceeeec
Confidence            333344443333


No 229
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}
Probab=63.77  E-value=12  Score=28.38  Aligned_cols=78  Identities=15%  Similarity=0.051  Sum_probs=51.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--hh------cC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--KR------LA  113 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~~------~~  113 (256)
                      ++++||=-|++. .++.++++.+.++  +++|+.+|.+++.++...+..   +.+...+..|+.+...  ..      .-
T Consensus         4 ~gK~alITGas~-GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           4 KGEAVLITGGAS-GLGRALVDRFVAE--GAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TTCEEEEETTTS-HHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC-HHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            578888888655 4677778877754  679999999998776655433   3334666777654321  00      12


Q ss_pred             CCccEEEECCCC
Q 025211          114 GLVDVMVVNPPY  125 (256)
Q Consensus       114 ~~fD~Ii~npP~  125 (256)
                      +++|+++.|--.
T Consensus        78 g~idilvnnAG~   89 (276)
T d1bdba_          78 GKIDTLIPNAGI   89 (276)
T ss_dssp             SCCCEEECCCCC
T ss_pred             CCcccccccccc
Confidence            679999987543


No 230
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}
Probab=63.47  E-value=18  Score=26.62  Aligned_cols=61  Identities=13%  Similarity=0.212  Sum_probs=38.2

Q ss_pred             CCCEEEEecc-cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhh
Q 025211           42 HPVLCMEVGC-GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIAS  106 (256)
Q Consensus        42 ~~~~VLDlGc-G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~  106 (256)
                      ++++||=.|+ |+-.++.++++.+.++  +++|+.++.+.+..  +++..+..+.....+..|+.+
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~--~~~~~~~~~~~~~~~~~dv~~   66 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRL--IQRITDRLPAKAPLLELDVQN   66 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHH--HHHHHTTSSSCCCEEECCTTC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHH--HHHHHHHcCCceeeEeeeccc
Confidence            6789999996 5545666677776644  67899998876543  222223334344566666654


No 231
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=63.46  E-value=16  Score=23.79  Aligned_cols=53  Identities=15%  Similarity=0.146  Sum_probs=39.1

Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           70 GVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        70 ~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +.+|..+|-++...+..+..+...|...-....+..+.........||+|+++
T Consensus         4 ~lriLvVDD~~~~r~~i~~~L~~~g~~~v~~a~~g~~a~~~~~~~~~dlii~D   56 (128)
T d1jbea_           4 ELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISD   56 (128)
T ss_dssp             TCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHTTCCCCEEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHhcCCCCEEEEe
Confidence            46899999999999999998888776432234555555444445789999995


No 232
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.91  E-value=8.4  Score=27.59  Aligned_cols=102  Identities=17%  Similarity=0.163  Sum_probs=64.1

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc-------CCcc--------------eE-EE
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH-------NVHA--------------DL-IN  101 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~-------~~~~--------------~~-~~  101 (256)
                      ++|.=+|+|+  ++..++..+..  .|..|+.+|.+++.++.+++++...       +...              ++ ..
T Consensus         5 kkvaViGaG~--mG~~iA~~~a~--~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~   80 (192)
T d1f0ya2           5 KHVTVIGGGL--MGAGIAQVAAA--TGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS   80 (192)
T ss_dssp             CEEEEECCSH--HHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred             EEEEEECcCH--HHHHHHHHHHh--CCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence            5677788754  44444554442  3679999999999999888876532       1100              01 11


Q ss_pred             cchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC
Q 025211          102 TDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA  176 (256)
Q Consensus       102 ~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  176 (256)
                      .|..+.     -...|+|+-.-|                      .......+++.++.+.++++-++.-.+.+.
T Consensus        81 ~d~~~a-----~~~ad~ViEav~----------------------E~l~~K~~v~~~l~~~~~~~~ilasnTS~l  128 (192)
T d1f0ya2          81 TDAASV-----VHSTDLVVEAIV----------------------ENLKVKNELFKRLDKFAAEHTIFASNTSSL  128 (192)
T ss_dssp             SCHHHH-----TTSCSEEEECCC----------------------SCHHHHHHHHHHHTTTSCTTCEEEECCSSS
T ss_pred             chhHhh-----hcccceehhhcc----------------------cchhHHHHHHHHHhhhcccCceeeccCccc
Confidence            122221     145789987543                      224557889999999999998887654433


No 233
>d1yf3a1 c.66.1.28 (A:1-259) DNA methylase T4DAM {Bacteriophage T4 [TaxId: 10665]}
Probab=61.87  E-value=1.5  Score=33.08  Aligned_cols=48  Identities=19%  Similarity=0.158  Sum_probs=34.6

Q ss_pred             HHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH
Q 025211           25 FALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT   86 (256)
Q Consensus        25 ~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a   86 (256)
                      ..++++|.+.++     +..+.+|+.||+|.+.+.    +     ...++.-|+++..+..-
T Consensus        12 ~~l~~~i~~~~p-----~~~~yvEPF~Gggav~~~----~-----~~~~v~ND~n~~lin~~   59 (259)
T d1yf3a1          12 QSLLPELKSHFP-----KYNRFVDLFCGGLSVSLN----V-----NGPVLANDIQEPIIEMY   59 (259)
T ss_dssp             TTTHHHHHHTCC-----CCSEEEETTCTTCTTGGG----S-----CSSEEEECSCHHHHHHH
T ss_pred             HHHHHHHHHhCC-----CCCeEEeecccHHHHHhc----c-----CCCEEEecCCHHHHHHH
Confidence            346777888764     468999999999997532    1     12578999999877543


No 234
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.25  E-value=25  Score=25.94  Aligned_cols=65  Identities=18%  Similarity=0.275  Sum_probs=44.4

Q ss_pred             CCCEEEEecccccHHHHHHHHHhccc-CCCceEEEEeCCHHHHHHHHHHHHHcCC--cceEEEcchhhc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQE-VPGVQYIATDINPYAVEVTRKTLEAHNV--HADLINTDIASG  107 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~-~~~~~v~giD~~~~~i~~a~~~~~~~~~--~~~~~~~d~~~~  107 (256)
                      .++.+|=-|++.| ++.++++.+.+. ..+++|+.++.+++.++.+.+.+...+.  +...+.+|+.+.
T Consensus         5 ~gKvalITGas~G-IG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~   72 (259)
T d1oaaa_           5 GCAVCVLTGASRG-FGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE   72 (259)
T ss_dssp             BSEEEEESSCSSH-HHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCH
Confidence            3455555566654 467777776542 2478999999999999888887765433  347778887654


No 235
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=60.84  E-value=15  Score=25.88  Aligned_cols=107  Identities=13%  Similarity=0.033  Sum_probs=61.8

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .++++.=+|+|..  +..+++.+.  .-+.+|++.|.....-.....         .+...++.+.+     ...|+|+.
T Consensus        43 ~~k~vgiiG~G~I--G~~va~~~~--~fg~~v~~~d~~~~~~~~~~~---------~~~~~~l~ell-----~~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRI--GQLVAQRIA--AFGAYVVAYDPYVSPARAAQL---------GIELLSLDDLL-----ARADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHH--HHHHHHHHH--TTTCEEEEECTTSCHHHHHHH---------TCEECCHHHHH-----HHCSEEEE
T ss_pred             cceeeeeccccch--hHHHHHHhh--hccceEEeecCCCChhHHhhc---------CceeccHHHHH-----hhCCEEEE
Confidence            5678887776644  444566554  346799999976432221111         22233444443     24799999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHH-HHHhhccccCeEEEEEEeCCC-CHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKIL-PSADKLLSKRGWLYLVTLTAN-DPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~  189 (256)
                      ..|+......                       ++ ....+.+|+|.+++=+..+.- ..+.+.+.+.+.
T Consensus       105 ~~Plt~~T~~-----------------------lin~~~l~~mk~~a~lIN~sRG~iVde~aL~~aL~~~  151 (184)
T d1ygya1         105 HLPKTPETAG-----------------------LIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGG  151 (184)
T ss_dssp             CCCCSTTTTT-----------------------CBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTS
T ss_pred             cCCCCchhhh-----------------------hhhHHHHhhhCCCceEEEecchhhhhhHHHHHHHhcC
Confidence            9887643321                       11 234467899888776544332 455666667654


No 236
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=60.61  E-value=6.6  Score=26.99  Aligned_cols=42  Identities=12%  Similarity=0.147  Sum_probs=31.0

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      .++||=+|+  |.++..+++.|.+.  +..|+.+|.+.+..+...+
T Consensus         2 ~K~IliiGa--G~~G~~~a~~L~~~--g~~V~v~dr~~~~a~~l~~   43 (182)
T d1e5qa1           2 TKSVLMLGS--GFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSA   43 (182)
T ss_dssp             CCEEEEECC--STTHHHHHHHHHTT--TCEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEECC--CHHHHHHHHHHHhC--CCEEEEEECChHHHHHHHh
Confidence            477888877  56666678877754  5689999999987665443


No 237
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}
Probab=60.47  E-value=9  Score=28.67  Aligned_cols=81  Identities=11%  Similarity=0.037  Sum_probs=45.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEE-eCCHHHHHHHHHHHHHcC-CcceEEEcchhhch---hhh-----
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIAT-DINPYAVEVTRKTLEAHN-VHADLINTDIASGL---EKR-----  111 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~gi-D~~~~~i~~a~~~~~~~~-~~~~~~~~d~~~~~---~~~-----  111 (256)
                      +++.||=-|++.|. +.++++.+.++  +++++.+ +..+. .+.+.+.....+ ....++..|.....   ...     
T Consensus         4 ~gK~vlITGgs~GI-G~~~A~~la~~--G~~vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           4 TNKNVIFVAALGGI-GLDTSRELVKR--NLKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             TTCEEEEETTTSHH-HHHHHHHHHHT--CCSEEEEEESSCC-HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHH-HHHHHHHHHHC--CCEEEEEECCccc-HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            57888888887765 77777777654  4565555 44333 222222222222 23366777764221   110     


Q ss_pred             -cCCCccEEEECCCCC
Q 025211          112 -LAGLVDVMVVNPPYV  126 (256)
Q Consensus       112 -~~~~fD~Ii~npP~~  126 (256)
                       .-+++|++|.|.-..
T Consensus        80 ~~~g~iDilvnnAG~~   95 (254)
T d1sbya1          80 DQLKTVDILINGAGIL   95 (254)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEeCCCCC
Confidence             126899999986543


No 238
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=59.78  E-value=8.9  Score=28.50  Aligned_cols=87  Identities=11%  Similarity=0.045  Sum_probs=51.6

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEE---eCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIAT---DINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR  111 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~gi---D~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~  111 (256)
                      +|+++||=.| |+|.++.++++.|.+++.. .|+.+   +.+.+..+...+.+...+....++..|+.+...      ..
T Consensus         7 ~p~gt~lVTG-gs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           7 KPTGTVLVTG-GTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCSEEEEET-TTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCcCEEEEEC-CCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4678888888 6777888888888765432 45544   222233333344445556666788888765421      11


Q ss_pred             -cCCCccEEEECCCCCCCC
Q 025211          112 -LAGLVDVMVVNPPYVPTP  129 (256)
Q Consensus       112 -~~~~fD~Ii~npP~~~~~  129 (256)
                       .....|.|+.|.......
T Consensus        85 ~~~~~i~~vv~~ag~~~~~  103 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATLDDG  103 (259)
T ss_dssp             CTTSCEEEEEECCCCCCCC
T ss_pred             ccccccccccccccccccc
Confidence             124588888876554433


No 239
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}
Probab=59.46  E-value=11  Score=24.36  Aligned_cols=52  Identities=15%  Similarity=0.264  Sum_probs=36.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC--------CHHHHHHHHHHHHHcCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI--------NPYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~--------~~~~i~~a~~~~~~~~~~~   97 (256)
                      .+++|+=+|.|  .+++++|..+.+  .+.+|+.++-        ++++.+.+++.+...|++.
T Consensus        21 ~p~~v~IiGgG--~iG~E~A~~l~~--~g~~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~gV~i   80 (117)
T d1onfa2          21 ESKKIGIVGSG--YIAVELINVIKR--LGIDSYIFARGNRILRKFDESVINVLENDMKKNNINI   80 (117)
T ss_dssp             CCSEEEEECCS--HHHHHHHHHHHT--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             CCCEEEEECCc--hHHHHHHHHHHh--ccccceeeehhccccccccHHHHHHHHHHHHhCCCEE
Confidence            46888877665  555667777663  3678888885        5667788888888877653


No 240
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.95  E-value=6.3  Score=29.24  Aligned_cols=46  Identities=20%  Similarity=0.159  Sum_probs=34.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHH
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKT   89 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~   89 (256)
                      -+|+.+|=-|++.| ++.++++.+.++  +++|+.+|.+++.++...+.
T Consensus         3 lkGKvalITGas~G-IG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~   48 (248)
T d2o23a1           3 VKGLVAVITGGASG-LGLATAERLVGQ--GASAVLLDLPNSGGEAQAKK   48 (248)
T ss_dssp             CTTCEEEEETTTSH-HHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHH
T ss_pred             CCCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHH
Confidence            47888888888866 677788877754  67999999998776655443


No 241
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.17  E-value=25  Score=24.18  Aligned_cols=41  Identities=15%  Similarity=0.032  Sum_probs=28.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHH
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVE   84 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~   84 (256)
                      ...+|.=+|+  |.++..++..+....-...+.-+|++++..+
T Consensus        18 ~~~KI~IIGa--G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~   58 (159)
T d2ldxa1          18 SRCKITVVGV--GDVGMACAISILLKGLADELALVDADTDKLR   58 (159)
T ss_dssp             CCCEEEEECC--SHHHHHHHHHHHTTTSCSEEEEECSCHHHHH
T ss_pred             CCCeEEEECC--CHHHHHHHHHHHhcCCCCEEEEEeCCchhhh
Confidence            3457888885  6677777776655444457999999986643


No 242
>d1h05a_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=57.36  E-value=1.9  Score=29.85  Aligned_cols=60  Identities=15%  Similarity=0.177  Sum_probs=38.7

Q ss_pred             HhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh---cCCCccEEEECCC
Q 025211           63 MLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR---LAGLVDVMVVNPP  124 (256)
Q Consensus        63 ~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~fD~Ii~npP  124 (256)
                      +|++|.|  .++|.+.-++..+.+++.....++..++.+.+.+..+..+   ..+.+|.||.||-
T Consensus        13 lLG~Rep--~iYG~~TL~~i~~~~~~~a~~~g~~l~~~QSN~EgelI~~I~~~~~~~dgiIiNPg   75 (144)
T d1h05a_          13 RLGRREP--AVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAG   75 (144)
T ss_dssp             GTTTC--------CCCHHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHHHHHTCCEEEECG
T ss_pred             hcCCCCC--ccCCcCCHHHHHHHHHHHHHHhCceEeehhhhHHHHHHHHHHHHhhccCcceeccc
Confidence            4565555  6999887677778888888888888888888765544322   1245899999984


No 243
>d1yf3a1 c.66.1.28 (A:1-259) DNA methylase T4DAM {Bacteriophage T4 [TaxId: 10665]}
Probab=57.10  E-value=8.5  Score=28.58  Aligned_cols=81  Identities=15%  Similarity=0.050  Sum_probs=42.7

Q ss_pred             eEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeC--
Q 025211           98 DLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLT--  175 (256)
Q Consensus        98 ~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--  175 (256)
                      .+...|..+..    ...=|+|.++|||......-       ..    ..+.....++.+.+..+-+.+|.++++...  
T Consensus       151 ~i~~~d~~~~~----~~~~~fvYlDPPY~~~~~~y-------~~----~~~~~d~~~l~~~l~~l~~~~~~~~lSn~~~~  215 (259)
T d1yf3a1         151 IFSSLHFKDVK----ILDGDFVYVDPPYLITVADY-------NK----FWSEDEEKDLLNLLDSLNDRGIKFGLSNVLEH  215 (259)
T ss_dssp             EEECCCGGGCC----CCTTEEEEECCCCTTSCCGG-------GG----GCCHHHHHHHHHHHHHHHTTTCEEEEEEESEE
T ss_pred             eeeehhhhhhc----cCcceEEEeCCccccccccc-------cC----CCcHHHHHHHHHHHHHHHccCCeEEEECCccc
Confidence            55566655542    34568999999998643321       00    012223445555555555667777775221  


Q ss_pred             -CCCHHHHHHHHHHcCCcEEE
Q 025211          176 -ANDPSQICLQMMEKGYAARI  195 (256)
Q Consensus       176 -~~~~~~~~~~~~~~g~~~~~  195 (256)
                       ......+.++..  +|....
T Consensus       216 ~~~~~~~i~~lyk--~~~~~~  234 (259)
T d1yf3a1         216 HGKENTLLKEWSK--KYNVKH  234 (259)
T ss_dssp             TTEECHHHHHHHT--TSEEEE
T ss_pred             cCCCCHHHHHHhc--CCcEEE
Confidence             122335555553  455433


No 244
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=54.24  E-value=25  Score=23.04  Aligned_cols=53  Identities=15%  Similarity=0.137  Sum_probs=39.3

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           68 VPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        68 ~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +.+.+|..+|-++...+..++.+...|.... ...+..+.+.. ....||+|+++
T Consensus         5 ~~g~rILvVDD~~~~~~~l~~~L~~~G~~v~-~a~~g~eal~~-l~~~~dlillD   57 (134)
T d1dcfa_           5 FTGLKVLVMDENGVSRMVTKGLLVHLGCEVT-TVSSNEECLRV-VSHEHKVVFMD   57 (134)
T ss_dssp             CTTCEEEEECSCHHHHHHHHHHHHHTTCEEE-EESSHHHHHHH-CCTTCSEEEEE
T ss_pred             CCCCEEEEEeCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHH-hhcCCCeEEEE
Confidence            3467899999999999999998888887542 34455555433 35679999995


No 245
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.12  E-value=14  Score=28.34  Aligned_cols=77  Identities=14%  Similarity=0.150  Sum_probs=45.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC----CHHHHHHHHHHHHHcC-CcceEEEcchhhchhh-hcCCC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI----NPYAVEVTRKTLEAHN-VHADLINTDIASGLEK-RLAGL  115 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~----~~~~i~~a~~~~~~~~-~~~~~~~~d~~~~~~~-~~~~~  115 (256)
                      .+++||=. -|||.++-.+...|.++  +..|+++|.    +...++..+....... ...+++.+|..+.... .....
T Consensus        15 ~~k~iLVT-G~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~   91 (341)
T d1sb8a_          15 QPKVWLIT-GVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG   91 (341)
T ss_dssp             SCCEEEEE-TTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred             CCCEEEEe-cCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc
Confidence            56777766 48999999998888754  458999985    2333333332221111 1237888888766432 12245


Q ss_pred             ccEEEE
Q 025211          116 VDVMVV  121 (256)
Q Consensus       116 fD~Ii~  121 (256)
                      .|.|+.
T Consensus        92 ~~~v~~   97 (341)
T d1sb8a_          92 VDYVLH   97 (341)
T ss_dssp             CSEEEE
T ss_pred             cccccc
Confidence            566654


No 246
>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=52.92  E-value=29  Score=23.32  Aligned_cols=100  Identities=13%  Similarity=0.140  Sum_probs=52.1

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCc
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPED  131 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~  131 (256)
                      |.|..+..+++.|.+.+  ..++..|..+...+.+.+ .   +.    ..... +..     ...|+++.+.|..     
T Consensus         7 GlG~MG~~ma~~L~~~g--~~~~~~~~~~~~~~~~~~-~---~~----~~~~~-~~~-----~~~~~~i~~~~~~-----   65 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRF--PTLVWNRTFEKALRHQEE-F---GS----EAVPL-ERV-----AEARVIFTCLPTT-----   65 (156)
T ss_dssp             CCSTTHHHHHHHHHTTS--CEEEECSSTHHHHHHHHH-H---CC----EECCG-GGG-----GGCSEEEECCSSH-----
T ss_pred             eHHHHHHHHHHHHHhCC--CEEEEeCCHHHHHHHHHH-c---CC----ccccc-ccc-----cceeEEEecccch-----
Confidence            55777777888876543  356666666665444332 2   11    11111 111     2357777765521     


Q ss_pred             ccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH---HHHHHHHHHcCCc
Q 025211          132 EVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP---SQICLQMMEKGYA  192 (256)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~~~~g~~  192 (256)
                                        .........+...++++..++-  .+....   .++.+.+.+.|..
T Consensus        66 ------------------~~v~~~~~~l~~~~~~~~~iid--~sT~~p~~~~~~~~~~~~~gi~  109 (156)
T d2cvza2          66 ------------------REVYEVAEALYPYLREGTYWVD--ATSGEPEASRRLAERLREKGVT  109 (156)
T ss_dssp             ------------------HHHHHHHHHHTTTCCTTEEEEE--CSCCCHHHHHHHHHHHHTTTEE
T ss_pred             ------------------hhhhhhhccccccccccccccc--cccCCHHHHHHHHHHHHHcCCe
Confidence                              1133455667777777776654  223323   3555666666544


No 247
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=52.80  E-value=15  Score=23.97  Aligned_cols=50  Identities=16%  Similarity=0.066  Sum_probs=37.6

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|... ....+..+.+.......||+|+++
T Consensus         4 ~ILiVDDd~~~~~~l~~~L~~~g~~v-~~a~~~~~al~~~~~~~~dliilD   53 (128)
T d1yioa2           4 TVFVVDDDMSVREGLRNLLRSAGFEV-ETFDCASTFLEHRRPEQHGCLVLD   53 (128)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTTTCEE-EEESSHHHHHHHCCTTSCEEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHcCCCc-cccccHHHHHHHHHhcCCCEeehh
Confidence            79999999999999999888777654 233455555544446789999996


No 248
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}
Probab=52.79  E-value=3.7  Score=32.07  Aligned_cols=70  Identities=23%  Similarity=0.311  Sum_probs=42.3

Q ss_pred             EEEecccccHHHHHHHHHhcccCCCceEEEEeCC----HHHHHHHHHHHHHcCCcceEEEcchhhchh--h-hcCCCccE
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN----PYAVEVTRKTLEAHNVHADLINTDIASGLE--K-RLAGLVDV  118 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~----~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~-~~~~~fD~  118 (256)
                      ||=.| |+|.++..++..|.++  +..|+++|..    .......+. .  ......++++|+.+...  . +....+|+
T Consensus         3 iLItG-~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~-~--~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~   76 (338)
T d1udca_           3 VLVTG-GSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIER-L--GGKHPTFVEGDIRNEALMTEILHDHAIDT   76 (338)
T ss_dssp             EEEET-TTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHH-H--HTSCCEEEECCTTCHHHHHHHHHHTTCSE
T ss_pred             EEEEC-CCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHh-h--cCCCCEEEEeecCCHHHHHHHHhccCCCE
Confidence            44343 7899999999888765  4589999852    222222111 1  12234888999876532  1 22357899


Q ss_pred             EEE
Q 025211          119 MVV  121 (256)
Q Consensus       119 Ii~  121 (256)
                      |+-
T Consensus        77 ViH   79 (338)
T d1udca_          77 VIH   79 (338)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            874


No 249
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=52.62  E-value=1.4  Score=30.55  Aligned_cols=98  Identities=11%  Similarity=0.053  Sum_probs=53.9

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcc----eEEEcchhhchhhhcCCCccEEE
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHA----DLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      +|+=+|+|.  ++..++..|.+.  +..|+.++.+++..+..    ...+.+.    .....+..+.     ...+|+|+
T Consensus         2 kI~IiGaG~--iG~~~a~~L~~~--G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~~~~D~ii   68 (167)
T d1ks9a2           2 KITVLGCGA--LGQLWLTALCKQ--GHEVQGWLRVPQPYCSV----NLVETDGSIFNESLTANDPDF-----LATSDLLL   68 (167)
T ss_dssp             EEEEECCSH--HHHHHHHHHHHT--TCEEEEECSSCCSEEEE----EEECTTSCEEEEEEEESCHHH-----HHTCSEEE
T ss_pred             EEEEECcCH--HHHHHHHHHHHC--CCceEEEEcCHHHhhhh----ccccCCccccccccccchhhh-----hcccceEE
Confidence            567777754  333355555432  55899998876532211    0011111    1111111111     24689999


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCH
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDP  179 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~  179 (256)
                      ..-+-+                        ..+..++.+...+.++..++....+....
T Consensus        69 i~vka~------------------------~~~~~~~~l~~~~~~~~~Iv~~qNG~~~~  103 (167)
T d1ks9a2          69 VTLKAW------------------------QVSDAVKSLASTLPVTTPILLIHNGMGTI  103 (167)
T ss_dssp             ECSCGG------------------------GHHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             Eeeccc------------------------chHHHHHhhccccCcccEEeeccCcccHH
Confidence            743211                        15778899999999998888766555433


No 250
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=52.46  E-value=9.2  Score=24.90  Aligned_cols=50  Identities=16%  Similarity=0.205  Sum_probs=36.7

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|... ....|..+.+.-.....||+|+++
T Consensus         3 rILiVDD~~~~~~~l~~~L~~~g~~v-~~a~~~~~al~~~~~~~~dlil~D   52 (123)
T d1mb3a_           3 KVLIVEDNELNMKLFHDLLEAQGYET-LQTREGLSALSIARENKPDLILMD   52 (123)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEE-EEESCHHHHHHHHHHHCCSEEEEE
T ss_pred             eEEEEECCHHHHHHHHHHHHHCCCEE-EEECCHHHHHHHHHhCCCCEEEEE
Confidence            68899999999999999988887754 234455555443334679999996


No 251
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=52.38  E-value=30  Score=23.29  Aligned_cols=117  Identities=15%  Similarity=0.139  Sum_probs=57.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHH-HHHHHHHcCC---cceEEEcchhhchhhhcCCCc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEV-TRKTLEAHNV---HADLINTDIASGLEKRLAGLV  116 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~-a~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~f  116 (256)
                      ..+.+|-=+|+  |.++..++..+....-..++..+|++++..+- +.+.-.....   ...+...|..+.      ...
T Consensus         4 ~~~~KI~IiGa--G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l------~da   75 (148)
T d1ldna1           4 NGGARVVVIGA--GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDC------RDA   75 (148)
T ss_dssp             TTSCEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGT------TTC
T ss_pred             CCCCeEEEECc--CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHh------ccc
Confidence            35678888886  55555555554433333479999999886542 2221111111   114445554332      346


Q ss_pred             cEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          117 DVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       117 D~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      |+|+..--....+...  +.+....      -......+.+.+.+. .|+|++++++.
T Consensus        76 Dvvvitag~~~~~~~~--R~dl~~~------N~~i~~~i~~~i~~~-~p~a~~ivvtN  124 (148)
T d1ldna1          76 DLVVICAGANQKPGET--RLDLVDK------NIAIFRSIVESVMAS-GFQGLFLVATN  124 (148)
T ss_dssp             SEEEECCSCCCCTTTC--SGGGHHH------HHHHHHHHHHHHHHH-TCCSEEEECSS
T ss_pred             eeEEEecccccccCcc--hhHHHHH------HHHHHHHHHHHHHhh-CCCceEEEecC
Confidence            9998742221111110  0000000      012344555555544 68998888543


No 252
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}
Probab=52.08  E-value=32  Score=23.67  Aligned_cols=70  Identities=21%  Similarity=0.117  Sum_probs=35.8

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEE-EeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIA-TDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~g-iD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      .+|.=+|||.-.-.. ....+.+......++| .|.+++..+...+..   +.  .....|+.+.+.   +..+|+|+..
T Consensus         4 irigiIG~G~~g~~~-h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~---~~--~~~~~~~~ell~---~~~id~v~I~   74 (181)
T d1zh8a1           4 IRLGIVGCGIAAREL-HLPALKNLSHLFEITAVTSRTRSHAEEFAKMV---GN--PAVFDSYEELLE---SGLVDAVDLT   74 (181)
T ss_dssp             EEEEEECCSHHHHHT-HHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH---SS--CEEESCHHHHHH---SSCCSEEEEC
T ss_pred             cEEEEEcCCHHHHHH-HHHHHHhCCCCeEEEEEEeccHhhhhhhhccc---cc--cceeeeeecccc---ccccceeecc
Confidence            467778887422111 1222222122346775 488887665544332   22  233456655543   3578988753


No 253
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=51.87  E-value=12  Score=24.41  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=37.2

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+...+.+...|.... ...+..+.+.......+|+|+++
T Consensus         3 kILiVDD~~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~~~~dlvl~D   52 (121)
T d1ys7a2           3 RVLVVDDDSDVLASLERGLRLSGFEVA-TAVDGAEALRSATENRPDAIVLD   52 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHhCCCCEEEEE
Confidence            688999999999999998888776532 34455555544445789999996


No 254
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=51.69  E-value=8.5  Score=25.01  Aligned_cols=50  Identities=12%  Similarity=0.217  Sum_probs=35.9

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|... ....+..+.+.......||+|+++
T Consensus         2 nILiVDDd~~~~~~l~~~L~~~g~~v-~~a~~~~eal~~l~~~~~dliilD   51 (119)
T d1zh2a1           2 NVLIVEDEQAIRRFLRTALEGDGMRV-FEAETLQRGLLEAATRKPDLIILD   51 (119)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTTTCEE-EEESSHHHHHHHHHHHCCSEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEE-EEeCCHHHHHHHHHhcCCCEEEec
Confidence            58889999999999998888766543 334455555443334689999996


No 255
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}
Probab=51.66  E-value=38  Score=24.31  Aligned_cols=73  Identities=10%  Similarity=0.005  Sum_probs=40.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEE-EeCCHHHHHHHHHHHHHcCCcc-eE-EEcchhhchhhhcCCCccE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIA-TDINPYAVEVTRKTLEAHNVHA-DL-INTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~g-iD~~~~~i~~a~~~~~~~~~~~-~~-~~~d~~~~~~~~~~~~fD~  118 (256)
                      +..+|-=+|||.-... .+...+. ..++..+++ +|.+++..+...+   ..+++. .+ ...|+.+.+.   +..+|+
T Consensus        32 ~~iriaiIG~G~~~~~-~~~~~~~-~~~~~~ivav~d~~~~~a~~~~~---~~~i~~~~~~~~~d~~ell~---~~~iD~  103 (221)
T d1h6da1          32 RRFGYAIVGLGKYALN-QILPGFA-GCQHSRIEALVSGNAEKAKIVAA---EYGVDPRKIYDYSNFDKIAK---DPKIDA  103 (221)
T ss_dssp             CCEEEEEECCSHHHHH-THHHHTT-TCSSEEEEEEECSCHHHHHHHHH---HTTCCGGGEECSSSGGGGGG---CTTCCE
T ss_pred             CCEEEEEEcCcHHHHH-HHHHHHH-hCCCceEEEEecCCHHHHHHHHH---hhccccccccccCchhhhcc---ccccee
Confidence            4568888898733211 1222332 245677774 5998877665443   345543 22 2345555432   357999


Q ss_pred             EEEC
Q 025211          119 MVVN  122 (256)
Q Consensus       119 Ii~n  122 (256)
                      |+..
T Consensus       104 V~I~  107 (221)
T d1h6da1         104 VYII  107 (221)
T ss_dssp             EEEC
T ss_pred             eeec
Confidence            9763


No 256
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=51.11  E-value=6.3  Score=26.94  Aligned_cols=36  Identities=19%  Similarity=0.221  Sum_probs=28.0

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      +++|+=+|+|...+  +++..|.+..++.+|+.+|.++
T Consensus         2 gkrivIvGgG~~G~--e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGGGTGGA--TAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECCSHHHH--HHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECccHHHH--HHHHHHHHcCCCCcEEEEECCC
Confidence            67899998887764  4666666667888999999776


No 257
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}
Probab=50.81  E-value=32  Score=24.06  Aligned_cols=110  Identities=16%  Similarity=0.135  Sum_probs=60.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+.+|.=+|+|.  ++..+++++..  -+.+|.+.|.....-.....    .+   -....++.+.+     ...|+|+.
T Consensus        43 ~~~~vgiiG~G~--IG~~va~~l~~--fg~~v~~~d~~~~~~~~~~~----~~---~~~~~~l~~~l-----~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGR--IGLAVLRRLAP--FDVHLHYTDRHRLPESVEKE----LN---LTWHATREDMY-----PVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSH--HHHHHHHHHGG--GTCEEEEECSSCCCHHHHHH----HT---CEECSSHHHHG-----GGCSEEEE
T ss_pred             cccceeeccccc--cchhhhhhhhc--cCceEEEEeecccccccccc----cc---ccccCCHHHHH-----Hhccchhh
Confidence            567888887763  33446666652  36789999975332221111    01   11222333332     46899999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-CHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-DPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~  189 (256)
                      ..|+......-                      +=.+....||+|.+++=+..+.- ..+.+.+.+++.
T Consensus       107 ~~plt~~T~~l----------------------i~~~~l~~mk~ga~lIN~aRG~ivd~~aL~~aL~~g  153 (188)
T d2naca1         107 NCPLHPETEHM----------------------INDETLKLFKRGAYIVNTARGKLCDRDAVARALESG  153 (188)
T ss_dssp             CSCCCTTTTTC----------------------BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred             cccccccchhh----------------------hHHHHHHhCCCCCEEEecCchhhhhHHHHHHHHhCC
Confidence            88876433211                      11334567888887776443222 455677777654


No 258
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=50.57  E-value=30  Score=22.83  Aligned_cols=50  Identities=12%  Similarity=0.110  Sum_probs=38.2

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++......+..+...|.... ...+..+.........+|+|+++
T Consensus         2 ~ILiVDDd~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~dlil~D   51 (140)
T d1qkka_           2 SVFLIDDDRDLRKAMQQTLELAGFTVS-SFASATEALAGLSADFAGIVISD   51 (140)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEE-EESCHHHHHHTCCTTCCSEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEE-EeCChHHHHHHHhccCcchHHHh
Confidence            588899999999999988888876543 33566666555556789999996


No 259
>d1a2oa1 c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=50.17  E-value=30  Score=22.75  Aligned_cols=52  Identities=10%  Similarity=0.103  Sum_probs=36.3

Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCcceE-EEcchhhchhhhcCCCccEEEEC
Q 025211           71 VQYIATDINPYAVEVTRKTLEAHNVHADL-INTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        71 ~~v~giD~~~~~i~~a~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      .+|..+|-++...+..+..+...+....+ ...|..+.+.......+|+|+++
T Consensus         4 irVLiVDD~~~~r~~l~~~L~~~g~~~~v~~a~~g~~al~~~~~~~pDlvllD   56 (140)
T d1a2oa1           4 IRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLD   56 (140)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHCCSEEEEE
T ss_pred             CEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHhcCCCEEEEc
Confidence            47999999999999988888766632223 23565555443334689999996


No 260
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=49.71  E-value=4.7  Score=28.73  Aligned_cols=49  Identities=14%  Similarity=0.185  Sum_probs=40.0

Q ss_pred             HHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecC
Q 025211          152 IDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRS  200 (256)
Q Consensus       152 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  200 (256)
                      .+++++.+.+..+.|...++.+.+....+++...|.+.|+....++...
T Consensus        17 v~dll~~i~~~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~   65 (174)
T d1c4oa2          17 ILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHEL   65 (174)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEeccc
Confidence            4678888888888998888877777778889999999999988777443


No 261
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=49.65  E-value=15  Score=25.97  Aligned_cols=105  Identities=13%  Similarity=0.077  Sum_probs=62.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|.=+|.|.  ++..+++++.  .-+.+|++.|.++..           + . .....++.+.+     ...|+|++
T Consensus        41 ~gk~vgIiG~G~--IG~~va~~l~--~~g~~v~~~d~~~~~-----------~-~-~~~~~~l~ell-----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGE--IGTRVGKILA--ALGAQVRGFSRTPKE-----------G-P-WRFTNSLEEAL-----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCST--HHHHHHHHHH--HTTCEEEEECSSCCC-----------S-S-SCCBSCSHHHH-----TTCSEEEE
T ss_pred             cCceEEEecccc--ccccceeeee--ccccccccccccccc-----------c-c-eeeeechhhhh-----hccchhhc
Confidence            567888777664  6666677665  236799999976421           0 1 11112333322     46799999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-CCHHHHHHHHHHcC
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-NDPSQICLQMMEKG  190 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~~~~g  190 (256)
                      ..|+......-                      +=....+.+|+|.+++-+..+. -..+.+.+.+++..
T Consensus        99 ~~pl~~~t~~l----------------------i~~~~l~~mk~~ailIN~~RG~ivd~~aL~~aL~~~~  146 (181)
T d1qp8a1          99 ALPLNKHTRGL----------------------VKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERP  146 (181)
T ss_dssp             CCCCSTTTTTC----------------------BCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCT
T ss_pred             ccccccccccc----------------------cccceeeeccccceEEeccccccccchhhhhhcccCc
Confidence            98875433211                      0133456789999888754322 24567777777654


No 262
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}
Probab=49.46  E-value=7.6  Score=25.39  Aligned_cols=50  Identities=18%  Similarity=0.207  Sum_probs=33.5

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-------HHHHHHHHHHHHHcCCc
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-------PYAVEVTRKTLEAHNVH   96 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-------~~~i~~a~~~~~~~~~~   96 (256)
                      +++|+=+  |.|..++++|..+.+.  +.+|+.++.+       +++.+.+.+.+...|++
T Consensus        32 ~~~vvIi--GgG~iG~E~A~~l~~~--g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~   88 (122)
T d1xhca2          32 SGEAIII--GGGFIGLELAGNLAEA--GYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVK   88 (122)
T ss_dssp             HSEEEEE--ECSHHHHHHHHHHHHT--TCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEE
T ss_pred             CCcEEEE--CCcHHHHHHHHHhhcc--cceEEEEeccccccCCCHHHHHHHHHHHHHCCcE
Confidence            3666654  6677777888887754  5678888865       44556667777776654


No 263
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=49.06  E-value=14  Score=26.33  Aligned_cols=110  Identities=12%  Similarity=-0.000  Sum_probs=62.1

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|.=+|.|  .++..+++++.  .-+..+.+.|............       ......++.+.+.     ..|+|+.
T Consensus        46 ~g~tvgIiG~G--~IG~~va~~l~--~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~ll~-----~sD~v~l  109 (191)
T d1gdha1          46 DNKTLGIYGFG--SIGQALAKRAQ--GFDMDIDYFDTHRASSSDEASY-------QATFHDSLDSLLS-----VSQFFSL  109 (191)
T ss_dssp             TTCEEEEECCS--HHHHHHHHHHH--TTTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHHH-----HCSEEEE
T ss_pred             cccceEEeecc--cchHHHHHHHH--hhccccccccccccccchhhcc-------cccccCCHHHHHh-----hCCeEEe
Confidence            35777777665  45555666665  3467999999754322211110       0222334444432     4699999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCC-CCHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTA-NDPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~~~~  189 (256)
                      ..|+......-                      +=+...+.+|+|.+++=+..+. -..+.+.+.+++.
T Consensus       110 ~~plt~~T~~l----------------------i~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~g  156 (191)
T d1gdha1         110 NAPSTPETRYF----------------------FNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAG  156 (191)
T ss_dssp             CCCCCTTTTTC----------------------BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             cCCCCchHhhe----------------------ecHHHhhCcCCccEEEecCCccchhhHHHHHHHHcC
Confidence            98876433211                      0123345789988887644322 2455677777664


No 264
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=48.83  E-value=34  Score=22.93  Aligned_cols=23  Identities=0%  Similarity=0.206  Sum_probs=16.9

Q ss_pred             HHHHHHHHHhhccccCeEEEEEEe
Q 025211          151 VIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       151 ~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      ....+.+.+.+. .|+|++++++.
T Consensus        96 i~~~i~~~i~~~-~p~~iiivvtN  118 (144)
T d1mlda1          96 IVATLTAACAQH-CPDAMICIISN  118 (144)
T ss_dssp             HHHHHHHHHHHH-CTTSEEEECSS
T ss_pred             HHHHHHHHHHhc-CCCeEEEEecC
Confidence            456667777766 89999998664


No 265
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=47.03  E-value=17  Score=23.29  Aligned_cols=51  Identities=10%  Similarity=0.071  Sum_probs=37.8

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP  123 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np  123 (256)
                      +|..+|-++...+.....+...|... ....+..+.........||+|+++.
T Consensus         3 rILiVDDd~~~~~~l~~~L~~~g~~v-~~a~~~~~a~~~~~~~~~dliilD~   53 (120)
T d1zgza1           3 HIVIVEDEPVTQARLQSYFTQEGYTV-SVTASGAGLREIMQNQSVDLILLDI   53 (120)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCEE-EEESSHHHHHHHHHHSCCSEEEEES
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEE-EEECCHHHHHHHHHhcCCCEEeeeh
Confidence            78999999999999999998887653 2344555554444457899999963


No 266
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Probab=46.37  E-value=44  Score=23.55  Aligned_cols=109  Identities=13%  Similarity=-0.040  Sum_probs=62.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|.=+|+|  .++..+++.+.  .-+++|.+.|.....-....     .+   -....++.+.+     ...|+|+.
T Consensus        48 ~gktvgIiG~G--~IG~~va~~l~--~fg~~v~~~d~~~~~~~~~~-----~~---~~~~~~l~~ll-----~~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLG--RVGQAVALRAK--AFGFNVLFYDPYLSDGVERA-----LG---LQRVSTLQDLL-----FHSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCS--HHHHHHHHHHH--TTTCEEEEECTTSCTTHHHH-----HT---CEECSSHHHHH-----HHCSEEEE
T ss_pred             eCceEEEeccc--cccccceeeee--ccccceeeccCcccccchhh-----hc---cccccchhhcc-----ccCCEEEE
Confidence            56788888665  56666777765  44789999997543211111     11   11222444433     24799999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-CHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-DPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~  189 (256)
                      ..|+......-                      +=......+|+|.+++=+..+.- ..+.+.+.+++.
T Consensus       111 ~~plt~~T~~l----------------------i~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~  157 (193)
T d1mx3a1         111 HCGLNEHNHHL----------------------INDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG  157 (193)
T ss_dssp             CCCCCTTCTTS----------------------BSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred             eecccccchhh----------------------hhHHHHhccCCCCeEEecCCceEEcHHHHHHHHHcC
Confidence            88875433311                      01233457899988876544332 456677777664


No 267
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=45.32  E-value=25  Score=23.78  Aligned_cols=41  Identities=20%  Similarity=0.184  Sum_probs=31.6

Q ss_pred             ccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHc
Q 025211           51 CGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAH   93 (256)
Q Consensus        51 cG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~   93 (256)
                      -|+|.++..+++.+.+.  +.+|+..+-+++.++...+.+...
T Consensus         7 gGaG~iG~alA~~la~~--G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           7 GGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             TTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             eCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhc
Confidence            35678999999998754  568999999998887776666544


No 268
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}
Probab=43.70  E-value=17  Score=27.52  Aligned_cols=74  Identities=15%  Similarity=0.152  Sum_probs=42.5

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEe-CCHHHHHHHHHHHHHcCCcceEEEcchhhch--hh-hcCCCccEEE
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATD-INPYAVEVTRKTLEAHNVHADLINTDIASGL--EK-RLAGLVDVMV  120 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD-~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~-~~~~~fD~Ii  120 (256)
                      +|| |=-|+|.++-.+.+.|.++  +.+|+++| ++..........+. ..-..+++.+|+.+..  .. +...++|.|+
T Consensus         2 KIL-VTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLL-ITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEE-EETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEE-EECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence            566 3346799998888887654  56899998 33322211111111 1123388999987542  11 1123579998


Q ss_pred             EC
Q 025211          121 VN  122 (256)
Q Consensus       121 ~n  122 (256)
                      -.
T Consensus        78 h~   79 (338)
T d1orra_          78 HL   79 (338)
T ss_dssp             EC
T ss_pred             ee
Confidence            64


No 269
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=43.66  E-value=17  Score=23.25  Aligned_cols=53  Identities=17%  Similarity=0.233  Sum_probs=35.8

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH--------HHHHHHHHHHHHcCCcc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP--------YAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~--------~~i~~a~~~~~~~~~~~   97 (256)
                      ..+++|+=+|.|  .+++++|..+.+.  +.+|+.++-.+        ++.+.+.+.+...|++.
T Consensus        20 ~~p~~v~IiGgG--~ig~E~A~~l~~~--G~~Vtlve~~~~il~~~d~~~~~~l~~~l~~~GI~i   80 (117)
T d1ebda2          20 EVPKSLVVIGGG--YIGIELGTAYANF--GTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEV   80 (117)
T ss_dssp             SCCSEEEEECCS--HHHHHHHHHHHHT--TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             hcCCeEEEECCC--ccceeeeeeeccc--ccEEEEEEecceecccccchhHHHHHHHHHhcCCEE
Confidence            345788888654  5666677776644  56888888554        45667777777777653


No 270
>d1je3a_ d.68.3.3 (A:) hypothetical protein YedF (EC005) {Escherichia coli [TaxId: 562]}
Probab=43.61  E-value=33  Score=21.31  Aligned_cols=44  Identities=23%  Similarity=0.150  Sum_probs=34.4

Q ss_pred             HHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEec
Q 025211          156 LPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQR  199 (256)
Q Consensus       156 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  199 (256)
                      +....+-|++|..+.+.........++.+++...|++...+...
T Consensus        44 ~k~~l~~l~~Ge~L~V~~dd~~a~~di~~~~~~~g~~v~~~~~~   87 (97)
T d1je3a_          44 TLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQD   87 (97)
T ss_dssp             HHHHTTTCCSSCEEEEEEBCSSSSCHHHHHHHHHTCSEEEEEEC
T ss_pred             HHHHHHcCCCCCEEEEEeCCccHHHHHHHHHHHcCCEEEEEEEe
Confidence            44445678999988887776777789999999999998766554


No 271
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}
Probab=43.56  E-value=62  Score=24.45  Aligned_cols=79  Identities=13%  Similarity=0.068  Sum_probs=50.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCc-c-eEEEcchhhchhh-hcCCCcc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVH-A-DLINTDIASGLEK-RLAGLVD  117 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~-~-~~~~~d~~~~~~~-~~~~~fD  117 (256)
                      .++++||=.|.. |.++..+++.|.++  +..|+|+.-+....+..+......... . .++.+|+.+...- ..-...|
T Consensus         9 ~~gk~VlVTG~s-GfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (342)
T d1y1pa1           9 PEGSLVLVTGAN-GFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             CTTCEEEEETTT-SHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCcCEEEEECCC-CHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence            368899988855 99998888877654  568999887776655554444333222 2 5677787654221 0114578


Q ss_pred             EEEEC
Q 025211          118 VMVVN  122 (256)
Q Consensus       118 ~Ii~n  122 (256)
                      .|+..
T Consensus        86 ~v~~~   90 (342)
T d1y1pa1          86 GVAHI   90 (342)
T ss_dssp             EEEEC
T ss_pred             hhhhh
Confidence            88764


No 272
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=43.55  E-value=23  Score=25.94  Aligned_cols=82  Identities=15%  Similarity=0.123  Sum_probs=52.2

Q ss_pred             CEEEEecccccHHHHHHHHHhccc-CCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh----c
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQE-VPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR----L  112 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~-~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~----~  112 (256)
                      ++||=-|+++| ++.++++.+.+. ..++.|+..+-+++.++.+++... .+-+..++..|+.+...      ..    .
T Consensus         3 KtilITGas~G-IG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRG-LGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-NHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSH-HHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCH-HHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh-cCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            57887776655 677777765321 246789999998877766654333 33345777888755321      11    1


Q ss_pred             CCCccEEEECCCCCC
Q 025211          113 AGLVDVMVVNPPYVP  127 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~  127 (256)
                      .+++|++|.|.-+..
T Consensus        81 ~~~iDiLvnNAg~~~   95 (248)
T d1snya_          81 DQGLNVLFNNAGIAP   95 (248)
T ss_dssp             GGCCSEEEECCCCCC
T ss_pred             cCCcceEEeeccccc
Confidence            367999999875533


No 273
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=43.40  E-value=35  Score=21.59  Aligned_cols=51  Identities=10%  Similarity=0.100  Sum_probs=37.3

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP  123 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np  123 (256)
                      +|..+|-++...+..+..+...|.... ...|..+.+......+||+|+++.
T Consensus         2 rILiVdDd~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~~~~dlillD~   52 (117)
T d2a9pa1           2 KILIVDDEKPISDIIKFNMTKEGYEVV-TAFNGREALEQFEAEQPDIIILDL   52 (117)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHHCCSEEEECS
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHhcCCCEEEecc
Confidence            578899999999999998888777542 345555554443446899999973


No 274
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=43.29  E-value=24  Score=22.76  Aligned_cols=53  Identities=15%  Similarity=0.308  Sum_probs=37.5

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC--------CHHHHHHHHHHHHHcCCcc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI--------NPYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~--------~~~~i~~a~~~~~~~~~~~   97 (256)
                      ..+++++=+|  .|.+++++|..+.+.  +.+|+.++-        ++++.+.+.+.+...|++.
T Consensus        23 ~~p~~~viiG--~G~iglE~A~~~~~~--G~~Vtvi~~~~~~l~~~d~~~~~~l~~~l~~~GI~i   83 (123)
T d1dxla2          23 EIPKKLVVIG--AGYIGLEMGSVWGRI--GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKF   83 (123)
T ss_dssp             SCCSEEEESC--CSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCE
T ss_pred             ccCCeEEEEc--cchHHHHHHHHHHhc--CCeEEEEEEccccCchhhhcchhhhhhhhhcccceE
Confidence            3567888775  567888888887654  467888764        4566677777888887754


No 275
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=42.79  E-value=42  Score=22.23  Aligned_cols=70  Identities=21%  Similarity=0.133  Sum_probs=36.4

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHH-HHHHHHcCC--cceEEEcchhhchhhhcCCCccEEEE
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVT-RKTLEAHNV--HADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a-~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      +|-=+|+  |.++..++..+..+.-...+..+|++++..+.- .+.......  ...+..+|..+.      ...|+|+.
T Consensus         2 KI~IIGa--G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~------~~adivvi   73 (140)
T d1a5za1           2 KIGIVGL--GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADL------KGSDVVIV   73 (140)
T ss_dssp             EEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGG------TTCSEEEE
T ss_pred             EEEEECc--CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHh------cCCCEEEE
Confidence            3445675  455555555443333345899999998765432 221111111  114444454332      34698887


Q ss_pred             C
Q 025211          122 N  122 (256)
Q Consensus       122 n  122 (256)
                      .
T Consensus        74 t   74 (140)
T d1a5za1          74 A   74 (140)
T ss_dssp             C
T ss_pred             e
Confidence            4


No 276
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=42.29  E-value=38  Score=21.61  Aligned_cols=51  Identities=10%  Similarity=0.004  Sum_probs=38.0

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP  123 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np  123 (256)
                      +|..+|-++...+.....+...|.... ...+..+.+.......||+|+++.
T Consensus         4 ~ILiVDDd~~~~~~l~~~L~~~g~~v~-~a~~~~~al~~l~~~~~dlii~D~   54 (121)
T d1xhfa1           4 HILIVEDELVTRNTLKSIFEAEGYDVF-EATDGAEMHQILSEYDINLVIMDI   54 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTTTCEEE-EESSHHHHHHHHHHSCCSEEEECS
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEE-EECChHHHHHHHHhcCCCEEEeec
Confidence            789999999999999998888776532 334555555444457899999973


No 277
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.74  E-value=14  Score=25.76  Aligned_cols=111  Identities=14%  Similarity=0.097  Sum_probs=60.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      -.+++|.=+|-|  .++..+|+.++  .-+++|+.+|++|..  .++...  .    -+....+.+.     ....|+++
T Consensus        22 l~Gk~v~V~GyG--~iG~g~A~~~r--g~G~~V~v~e~dp~~--al~A~~--d----G~~v~~~~~a-----~~~adivv   84 (163)
T d1li4a1          22 IAGKVAVVAGYG--DVGKGCAQALR--GFGARVIITEIDPIN--ALQAAM--E----GYEVTTMDEA-----CQEGNIFV   84 (163)
T ss_dssp             CTTCEEEEECCS--HHHHHHHHHHH--HTTCEEEEECSCHHH--HHHHHH--T----TCEECCHHHH-----TTTCSEEE
T ss_pred             ecCCEEEEeccc--cccHHHHHHHH--hCCCeeEeeecccch--hHHhhc--C----ceEeeehhhh-----hhhccEEE
Confidence            367888776554  66666777766  457899999999954  222221  1    2223333333     24579998


Q ss_pred             ECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEE
Q 025211          121 VNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIV  196 (256)
Q Consensus       121 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~  196 (256)
                      +.+.-.+                          -+-.+-.+.||+|-++.-+.. ++.+-++ ..+.+.......+
T Consensus        85 taTGn~~--------------------------vI~~eh~~~MKdgaIL~N~Gh-fd~EId~-~~L~~~~~~~~~v  132 (163)
T d1li4a1          85 TTTGCID--------------------------IILGRHFEQMKDDAIVCNIGH-FDVEIDV-KWLNENAVEKVNI  132 (163)
T ss_dssp             ECSSCSC--------------------------SBCHHHHTTCCTTEEEEECSS-STTSBCH-HHHHHHCSEEEEE
T ss_pred             ecCCCcc--------------------------chhHHHHHhccCCeEEEEecc-ccceecH-HHHhhccceeeee
Confidence            8543111                          112334557888888776433 3333333 3344444444333


No 278
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}
Probab=41.73  E-value=26  Score=25.08  Aligned_cols=43  Identities=23%  Similarity=0.263  Sum_probs=32.2

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHH
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTR   87 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~   87 (256)
                      -.+++|+=-|+|.  ++..+++.|.+.  +++|++.|+++..+..+.
T Consensus        25 L~gk~v~IqG~G~--VG~~~A~~L~~~--Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          25 LDGLTVLVQGLGA--VGGSLASLAAEA--GAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             STTCEEEEECCSH--HHHHHHHHHHHT--TCEEEEECSCHHHHHHHH
T ss_pred             CCCCEEEEECCCH--HHHHHHHHHHHC--CCEEEEecchHHHHHHHH
Confidence            5789999777664  555577777653  679999999998877544


No 279
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=41.73  E-value=47  Score=22.55  Aligned_cols=75  Identities=11%  Similarity=0.006  Sum_probs=43.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      .++++||=+|||.-.-++..+.  .+.  +++++.+.-+.+..+...+.+...+   .+...+..+.    ....+|+||
T Consensus        16 ~~~k~vlIlGaGGaarai~~al--~~~--g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~~~~~~----~~~~~dliI   84 (170)
T d1nyta1          16 RPGLRILLIGAGGASRGVLLPL--LSL--DCAVTITNRTVSRAEELAKLFAHTG---SIQALSMDEL----EGHEFDLII   84 (170)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHH--HHT--TCEEEEECSSHHHHHHHHHHTGGGS---SEEECCSGGG----TTCCCSEEE
T ss_pred             CCCCEEEEECCcHHHHHHHHHh--ccc--ceEEEeccchHHHHHHHHHHHhhcc---cccccccccc----cccccceee
Confidence            4789999999986665444433  222  4578888877766555444433222   2222332222    235789999


Q ss_pred             ECCCCC
Q 025211          121 VNPPYV  126 (256)
Q Consensus       121 ~npP~~  126 (256)
                      -.-|..
T Consensus        85 N~Tp~G   90 (170)
T d1nyta1          85 NATSSG   90 (170)
T ss_dssp             ECCSCG
T ss_pred             cccccC
Confidence            766554


No 280
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=41.02  E-value=39  Score=21.44  Aligned_cols=51  Identities=18%  Similarity=0.171  Sum_probs=37.3

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNP  123 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~np  123 (256)
                      +|..+|-++...+..+..+...|.... ...+..+.+......+||+|+++.
T Consensus         4 rILiVDDd~~~~~~l~~~L~~~g~~v~-~a~~~~~al~~l~~~~~dlillD~   54 (121)
T d1mvoa_           4 KILVVDDEESIVTLLQYNLERSGYDVI-TASDGEEALKKAETEKPDLIVLDV   54 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHHHCCSEEEEES
T ss_pred             CEEEEECCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHhcccccEEEecc
Confidence            689999999999999999988877542 334555544433346899999963


No 281
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=40.07  E-value=41  Score=21.37  Aligned_cols=50  Identities=12%  Similarity=0.155  Sum_probs=37.7

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|.-+|-++...+..+..+...|... ....+..+.+.......||+|+++
T Consensus         2 kILiVDD~~~~~~~l~~~L~~~g~~v-~~a~~~~~al~~l~~~~~dlil~D   51 (121)
T d1zesa1           2 RILVVEDEAPIREMVCFVLEQNGFQP-VEAEDYDSAVNQLNEPWPDLILLD   51 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEE-EEECSHHHHHHHSSSSCCSEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEE-EEECChHHHHHHHHccCCCEEEee
Confidence            57889999999999999888887753 234466665554456789999996


No 282
>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=40.07  E-value=45  Score=23.87  Aligned_cols=34  Identities=18%  Similarity=0.001  Sum_probs=21.1

Q ss_pred             CCCEEEEeccccc---HHHHHHHHHhcccCCCceEEEEeC
Q 025211           42 HPVLCMEVGCGSG---YVITSLALMLGQEVPGVQYIATDI   78 (256)
Q Consensus        42 ~~~~VLDlGcG~G---~~~~~l~~~l~~~~~~~~v~giD~   78 (256)
                      .+.+|+ +-||.|   .-++.+++.|.++  +.+|..+-.
T Consensus        39 ~~~~vl-vl~G~GNNGGDGl~~Ar~L~~~--g~~V~v~~~   75 (211)
T d2ax3a2          39 SDYRFL-VLCGGGNNGGDGFVVARNLLGV--VKDVLVVFL   75 (211)
T ss_dssp             TTCEEE-EEECSSHHHHHHHHHHHHHTTT--SSEEEEEEC
T ss_pred             cCCcEE-EEECCCCCchhHHHHHHHHHhc--CCeeEEEec
Confidence            455666 666655   5677788888765  445555444


No 283
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}
Probab=39.60  E-value=8.1  Score=29.86  Aligned_cols=70  Identities=19%  Similarity=0.182  Sum_probs=42.7

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhch--hhhcCCCccEEEE
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGL--EKRLAGLVDVMVV  121 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~fD~Ii~  121 (256)
                      +||=.|. +|.++..+++.|.+++ ...|+++|..........     .....+++.+|+.+..  .......+|.|+-
T Consensus         2 KILITG~-tGfiG~~l~~~Ll~~g-~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih   73 (342)
T d2blla1           2 RVLILGV-NGFIGNHLTERLLRED-HYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (342)
T ss_dssp             EEEEETC-SSHHHHHHHHHHHHST-TCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             EEEEECC-CcHHHHHHHHHHHHCC-CCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence            4666665 9999988888765432 458999998644322111     1122389999986532  1111246899886


No 284
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=38.94  E-value=49  Score=21.96  Aligned_cols=38  Identities=18%  Similarity=-0.021  Sum_probs=23.8

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHH
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVE   84 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~   84 (256)
                      +|-=+|+  |.++..++..+..+.--..+..+|++++..+
T Consensus         2 KI~IIGa--G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~   39 (142)
T d1ojua1           2 KLGFVGA--GRVGSTSAFTCLLNLDVDEIALVDIAEDLAV   39 (142)
T ss_dssp             EEEEECC--SHHHHHHHHHHHHHSCCSEEEEECSSHHHHH
T ss_pred             EEEEECc--CHHHHHHHHHHHhcCcCceEEEEecccchhh
Confidence            3444665  6666666665443333347999999998754


No 285
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=38.91  E-value=55  Score=22.48  Aligned_cols=82  Identities=10%  Similarity=-0.007  Sum_probs=42.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcC--CcceEEEcchhhc--hhhhcCCCc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHN--VHADLINTDIASG--LEKRLAGLV  116 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~--~~~~~~~~d~~~~--~~~~~~~~f  116 (256)
                      ..+++||=+|||.-.-+  ++..+..... ..++.++-+++.++.+....+..+  ........++.+.  ... .-..+
T Consensus        16 l~~k~vlIlGaGGaara--i~~al~~~g~-~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   91 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTA--IGAQGAIEGL-KEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASA   91 (182)
T ss_dssp             CTTCEEEEECCSHHHHH--HHHHHHHTTC-SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHTC
T ss_pred             cCCCEEEEECCcHHHHH--HHHHHhhcCC-ceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhh-hhccc
Confidence            46799999999844433  3333333233 378888877666655544333221  1112222332221  111 01468


Q ss_pred             cEEEECCCCC
Q 025211          117 DVMVVNPPYV  126 (256)
Q Consensus       117 D~Ii~npP~~  126 (256)
                      |+||-.-|-.
T Consensus        92 diiIN~Tp~G  101 (182)
T d1vi2a1          92 DILTNGTKVG  101 (182)
T ss_dssp             SEEEECSSTT
T ss_pred             ceeccccCCc
Confidence            9999765544


No 286
>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}
Probab=38.66  E-value=67  Score=23.41  Aligned_cols=40  Identities=23%  Similarity=0.115  Sum_probs=24.8

Q ss_pred             cccccHHHHHHHHHhcccCCCceEEEEeC-CHHHHHHHHHHHHH
Q 025211           50 GCGSGYVITSLALMLGQEVPGVQYIATDI-NPYAVEVTRKTLEA   92 (256)
Q Consensus        50 GcG~G~~~~~l~~~l~~~~~~~~v~giD~-~~~~i~~a~~~~~~   92 (256)
                      |++ +.++.++++.|.++  +++|+..+. +++..+...+.+..
T Consensus         9 Gas-~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~l~~   49 (284)
T d1e7wa_           9 GAA-KRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNA   49 (284)
T ss_dssp             TCS-SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCC-CHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHHHh
Confidence            444 45677777777654  678887765 45555655555543


No 287
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=38.31  E-value=49  Score=21.77  Aligned_cols=55  Identities=9%  Similarity=0.129  Sum_probs=36.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHcCCcceEE-Ecchhhchhhh-------cCCCccEEEECC
Q 025211           69 PGVQYIATDINPYAVEVTRKTLEAHNVHADLI-NTDIASGLEKR-------LAGLVDVMVVNP  123 (256)
Q Consensus        69 ~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~-~~d~~~~~~~~-------~~~~fD~Ii~np  123 (256)
                      |-.+|..+|-++...+..+..+...+...++. ..|..+.+.-.       ....+|+|+++.
T Consensus         2 ppk~ILiVdD~~~~~~~l~~~L~~~g~~~~v~~a~~g~~Al~~l~~~~~~~~~~~pdlIllD~   64 (144)
T d1i3ca_           2 PPKVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDL   64 (144)
T ss_dssp             CCEEEEEECCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECS
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHhchhhhccCCCCEEEEEC
Confidence            33479999999999999999888777765443 33444333211       124699999963


No 288
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=38.30  E-value=22  Score=25.41  Aligned_cols=106  Identities=15%  Similarity=0.100  Sum_probs=59.0

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|.=+|+|.  ++..+++++.  .-+++|++.|..+..           .....+...++.+..     ...|+|+.
T Consensus        44 ~~ktvgIiG~G~--IG~~va~~l~--~fg~~v~~~d~~~~~-----------~~~~~~~~~~l~~l~-----~~~D~v~~  103 (199)
T d1dxya1          44 GQQTVGVMGTGH--IGQVAIKLFK--GFGAKVIAYDPYPMK-----------GDHPDFDYVSLEDLF-----KQSDVIDL  103 (199)
T ss_dssp             GGSEEEEECCSH--HHHHHHHHHH--HTTCEEEEECSSCCS-----------SCCTTCEECCHHHHH-----HHCSEEEE
T ss_pred             cceeeeeeeccc--cccccccccc--ccceeeeccCCccch-----------hhhcchhHHHHHHHH-----Hhccccee
Confidence            457888887664  4455666654  347899999975321           111122333444433     24799999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-CHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-DPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~  189 (256)
                      ..|+......-                      +=....+.||+|.+++=+..+.- ..+.+.+.+++.
T Consensus       104 ~~plt~~T~~l----------------------i~~~~l~~mk~~a~lIN~aRG~vvde~aL~~aL~~g  150 (199)
T d1dxya1         104 HVPGIEQNTHI----------------------INEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSG  150 (199)
T ss_dssp             CCCCCGGGTTS----------------------BCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred             eeccccccccc----------------------ccHHHhhccCCceEEEecccHhhhhhHHHHHHHhcC
Confidence            88865322210                      01233456788887776443332 345666666654


No 289
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}
Probab=38.26  E-value=29  Score=22.04  Aligned_cols=52  Identities=19%  Similarity=0.288  Sum_probs=35.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC--------CHHHHHHHHHHHHHcCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI--------NPYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~--------~~~~i~~a~~~~~~~~~~~   97 (256)
                      -+++|+=+  |.|..+++++..+.+.  +.+|+-++.        +++..+.+.+.++..|++.
T Consensus        20 ~p~~vvIi--GgG~ig~E~A~~l~~~--G~~Vtlve~~~~~l~~~d~~~~~~~~~~l~~~GV~~   79 (116)
T d1gesa2          20 LPERVAVV--GAGYIGVELGGVINGL--GAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQL   79 (116)
T ss_dssp             CCSEEEEE--CCSHHHHHHHHHHHHT--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEE--CCChhhHHHHHHhhcc--ccEEEEEeecchhhhhcchhhHHHHHHHHHHCCCEE
Confidence            35677765  5566677788877654  568888886        4556677778888887653


No 290
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=38.04  E-value=4.8  Score=27.61  Aligned_cols=60  Identities=15%  Similarity=0.140  Sum_probs=40.1

Q ss_pred             HhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh---cCCCccEEEECCC
Q 025211           63 MLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR---LAGLVDVMVVNPP  124 (256)
Q Consensus        63 ~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~fD~Ii~npP  124 (256)
                      +|+.|.|  .++|.+.-++.-+.+++.....++..++++.+.+..+..+   ..+.+|-|+.||-
T Consensus        13 lLG~Rep--~iYG~~TL~~i~~~~~~~a~~~~i~l~~~QSN~EgelI~~I~~~~~~~dgiIiNPg   75 (141)
T d1gqoa_          13 RLGSREP--EVFGRQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPG   75 (141)
T ss_dssp             GTTSSCH--HHHCSCCHHHHHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHHTTTCSEEEEECG
T ss_pred             ccCCCCC--CcCCccCHHHHHHHHHHHHHHcCCeeeeehhhHHHHHHHHHHHhhhccceeeecch
Confidence            4554444  5777665566666677777777888888887765443221   3567999999984


No 291
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=37.78  E-value=11  Score=27.07  Aligned_cols=106  Identities=13%  Similarity=0.088  Sum_probs=59.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|.=+|+|  .++..+++++.  .-+++|++.|........      ..+    +...++.+.+     ...|+|+.
T Consensus        42 ~gk~vgIiG~G--~IG~~va~~l~--~fg~~V~~~d~~~~~~~~------~~~----~~~~~l~~~l-----~~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTG--HIGQVFMQIME--GFGAKVITYDIFRNPELE------KKG----YYVDSLDDLY-----KQADVISL  102 (197)
T ss_dssp             GGSEEEEECCS--HHHHHHHHHHH--HTTCEEEEECSSCCHHHH------HTT----CBCSCHHHHH-----HHCSEEEE
T ss_pred             cCCeEEEeccc--ccchhHHHhHh--hhcccccccCcccccccc------cce----eeeccccccc-----cccccccc
Confidence            46777777665  56666777765  346799999976432111      111    1122333333     24799999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHH-HHHhhccccCeEEEEEEeCCC-CHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKIL-PSADKLLSKRGWLYLVTLTAN-DPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~  189 (256)
                      ..|+......                       ++ .+..+.+|+|.+++=+..+.- ..+.+.+.+.+.
T Consensus       103 ~~plt~~T~~-----------------------li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~  149 (197)
T d1j4aa1         103 HVPDVPANVH-----------------------MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG  149 (197)
T ss_dssp             CSCCCGGGTT-----------------------CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             cCCccccccc-----------------------cccHHHHhhhCCccEEEecCchhhhhhHHHHHHHhcc
Confidence            8887532211                       11 222356788877775443222 455667777664


No 292
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=37.57  E-value=45  Score=21.13  Aligned_cols=50  Identities=6%  Similarity=0.062  Sum_probs=36.4

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..++.+...|... ....+..+.+......+||+|+++
T Consensus         3 rILvVDD~~~~~~~l~~~L~~~g~~v-~~a~~g~eal~~~~~~~~dlillD   52 (119)
T d1peya_           3 KILIVDDQSGIRILLNEVFNKEGYQT-FQAANGLQALDIVTKERPDLVLLD   52 (119)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEE-EEESSHHHHHHHHHHHCCSEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHHHHcCCEE-EEeCCHHHHHHHHHhCCCCEEEEe
Confidence            68899999999999999888877653 234455554443334689999996


No 293
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.17  E-value=32  Score=22.17  Aligned_cols=52  Identities=21%  Similarity=0.227  Sum_probs=36.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC--------HHHHHHHHHHHHHcCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN--------PYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~--------~~~i~~a~~~~~~~~~~~   97 (256)
                      .+++|+=+|.|  .++++++..+.+.  +.+|+.++-+        ++..+.+.+.+...|++.
T Consensus        21 ~pk~vvIvGgG--~iG~E~A~~l~~~--G~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~Gv~i   80 (125)
T d3grsa2          21 LPGRSVIVGAG--YIAVEMAGILSAL--GSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEV   80 (125)
T ss_dssp             CCSEEEEECCS--HHHHHHHHHHHHT--TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             cCCEEEEEcCC--ccHHHHHHHHhcC--CcEEEEEeeccccccchhhHHHHHHHHHHHHCCCEE
Confidence            35788777655  5777888877654  5678888864        556677777777777754


No 294
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=37.15  E-value=61  Score=22.49  Aligned_cols=106  Identities=15%  Similarity=0.128  Sum_probs=59.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|.=+|+|  .++..+++++.  ..+++|++.|.....           .........++.+.+     ...|+|++
T Consensus        43 ~~~~vgiiG~G--~IG~~va~~l~--~fg~~v~~~d~~~~~-----------~~~~~~~~~~l~ell-----~~sDii~i  102 (188)
T d1sc6a1          43 RGKKLGIIGYG--HIGTQLGILAE--SLGMYVYFYDIENKL-----------PLGNATQVQHLSDLL-----NMSDVVSL  102 (188)
T ss_dssp             TTCEEEEECCS--HHHHHHHHHHH--HTTCEEEEECSSCCC-----------CCTTCEECSCHHHHH-----HHCSEEEE
T ss_pred             cceEEEEeecc--cchhhhhhhcc--cccceEeeccccccc-----------hhhhhhhhhhHHHHH-----hhccceee
Confidence            56788777665  44445666654  347899999965421           011122222344433     24699999


Q ss_pred             CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC-CHHHHHHHHHHc
Q 025211          122 NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN-DPSQICLQMMEK  189 (256)
Q Consensus       122 npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~  189 (256)
                      ..|+......-                      +=++..+.+|+|.+++=+..+.- ..+.+.+.+.+.
T Consensus       103 ~~plt~~T~~l----------------------i~~~~l~~mk~~a~lIN~aRG~lvde~aL~~aL~~~  149 (188)
T d1sc6a1         103 HVPENPSTKNM----------------------MGAKEISLMKPGSLLINASRGTVVDIPALADALASK  149 (188)
T ss_dssp             CCCSSTTTTTC----------------------BCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTT
T ss_pred             cccCCcchhhh----------------------ccHHHHhhCCCCCEEEEcCcHHhhhhHHHHHHHHcC
Confidence            88876433211                      01233456888888876544332 455677777654


No 295
>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.77  E-value=45  Score=24.52  Aligned_cols=25  Identities=12%  Similarity=-0.295  Sum_probs=16.4

Q ss_pred             ccHHHHHHHHHhcccCCCceEEEEe
Q 025211           53 SGYVITSLALMLGQEVPGVQYIATD   77 (256)
Q Consensus        53 ~G~~~~~l~~~l~~~~~~~~v~giD   77 (256)
                      +|.-++.+++.|.+++....++.+.
T Consensus        67 NGGDGl~~Ar~L~~~G~~V~v~~~~   91 (243)
T d1jzta_          67 NGGDGLVCARHLKLFGYNPVVFYPK   91 (243)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred             ccHHHHHHHHHHHhcCCeeEEEEeC
Confidence            4556778888887765555555544


No 296
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=36.66  E-value=57  Score=22.03  Aligned_cols=70  Identities=13%  Similarity=0.046  Sum_probs=38.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEE
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMV  120 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii  120 (256)
                      ..+++||=+|.  |..+..+++.|...+.. .++.+--+.+-.+...+.   .+.  .+  .++.+.....  ..+|+||
T Consensus        22 l~~~~ilviGa--G~~g~~v~~~L~~~g~~-~i~v~nRt~~ka~~l~~~---~~~--~~--~~~~~~~~~l--~~~Divi   89 (159)
T d1gpja2          22 LHDKTVLVVGA--GEMGKTVAKSLVDRGVR-AVLVANRTYERAVELARD---LGG--EA--VRFDELVDHL--ARSDVVV   89 (159)
T ss_dssp             CTTCEEEEESC--CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHH---HTC--EE--CCGGGHHHHH--HTCSEEE
T ss_pred             cccCeEEEECC--CHHHHHHHHHHHhcCCc-EEEEEcCcHHHHHHHHHh---hhc--cc--ccchhHHHHh--ccCCEEE
Confidence            36899999986  55555566666554332 677777664433322222   221  22  2222222111  4799999


Q ss_pred             EC
Q 025211          121 VN  122 (256)
Q Consensus       121 ~n  122 (256)
                      +.
T Consensus        90 ~a   91 (159)
T d1gpja2          90 SA   91 (159)
T ss_dssp             EC
T ss_pred             Ee
Confidence            84


No 297
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.20  E-value=21  Score=24.97  Aligned_cols=51  Identities=8%  Similarity=-0.027  Sum_probs=36.8

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|.-+|-++...+..+..+...|...--...+..+...-.....||+|+++
T Consensus         5 kILiVDD~~~~r~~l~~~L~~~g~~vv~~a~~g~eal~~~~~~~pDlvllD   55 (190)
T d1s8na_           5 RVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMD   55 (190)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhcCCCCEEEEe
Confidence            799999999999999988877665422234555555543345689999996


No 298
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=35.93  E-value=6.8  Score=26.99  Aligned_cols=60  Identities=18%  Similarity=0.279  Sum_probs=40.3

Q ss_pred             HhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh---cCCCccEEEECCC
Q 025211           63 MLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR---LAGLVDVMVVNPP  124 (256)
Q Consensus        63 ~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~fD~Ii~npP  124 (256)
                      +|+.|.|  .++|...-++..+.+++.....++...+.+.+.+..+..+   ..+.+|.|+.||-
T Consensus        14 lLG~Rep--~iYG~~TL~~i~~~~~~~~~~~g~~l~~~QSN~Egeli~~i~~a~~~~dgiIiNpg   76 (146)
T d1uqra_          14 MLGKREP--HIYGSQTLSDIEQHLQQSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIIINPG   76 (146)
T ss_dssp             GTTCSSG--GGTTCCCHHHHHHHHHHHHHHTTCEEEEEECSSHHHHHHHHHHTTTTCCEEEEECT
T ss_pred             ccCCCCC--CcCCccCHHHHHHHHHHHHHHcCCcchhhHHhHHHHHHHHHHHHhcCcceeEeccc
Confidence            4555544  5777765566667777777777887788887765443321   2457999999985


No 299
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]}
Probab=35.23  E-value=26  Score=26.56  Aligned_cols=39  Identities=18%  Similarity=0.353  Sum_probs=28.1

Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEe
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTL  174 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  174 (256)
                      .--++|.||||.-                     .+.+..++..+...|+++|--+.+..
T Consensus       228 GSGm~iiNPPw~l---------------------~~~l~~~L~~L~~~L~~~~~~~~les  266 (271)
T d2oo3a1         228 GCGLWIINPPYTF---------------------PSEIKLVLETLTTYFNPGSSSYMIES  266 (271)
T ss_dssp             EEEEEEESCCTTH---------------------HHHHHHHHHHHHHHSSTTTCEEEEEE
T ss_pred             eeEEEEECCCccH---------------------HHHHHHHHHHHHHHhCCCCCceeecc
Confidence            4689999999852                     22366778888899998876655443


No 300
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=35.10  E-value=12  Score=22.99  Aligned_cols=71  Identities=14%  Similarity=0.056  Sum_probs=39.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      .+++|+=+|-|--  ++.+++.|.+.  ++.|++.|..+.....  +.+   .....++.+...+...    ..+|+|+.
T Consensus         4 ~~K~v~ViGlG~s--G~s~a~~L~~~--g~~v~~~D~~~~~~~~--~~~---~~~~~~~~~~~~~~~~----~~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGLGLT--GLSCVDFFLAR--GVTPRVMDTRMTPPGL--DKL---PEAVERHTGSLNDEWL----MAADLIVA   70 (93)
T ss_dssp             TTCCEEEECCSHH--HHHHHHHHHHT--TCCCEEEESSSSCTTG--GGS---CTTSCEEESBCCHHHH----HHCSEEEE
T ss_pred             CCCEEEEEeECHH--HHHHHHHHHHC--CCEEEEeeCCcCchhH--HHH---hhccceeecccchhhh----ccCCEEEE
Confidence            5788888877643  33456666643  6789999985542111  111   1112444444322211    36899999


Q ss_pred             CCCC
Q 025211          122 NPPY  125 (256)
Q Consensus       122 npP~  125 (256)
                      .|-.
T Consensus        71 SPGi   74 (93)
T d2jfga1          71 SPGI   74 (93)
T ss_dssp             CTTS
T ss_pred             CCCC
Confidence            8854


No 301
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=35.08  E-value=53  Score=21.23  Aligned_cols=53  Identities=11%  Similarity=0.172  Sum_probs=38.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           69 PGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        69 ~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      .+.+|..+|-++...+..+..+...|.... ...+..+...-.....||+|+++
T Consensus         7 ~~~~ILiVDD~~~~~~~l~~~L~~~g~~v~-~a~~g~ea~~~~~~~~~dlillD   59 (133)
T d2ayxa1           7 DDMMILVVDDHPINRRLLADQLGSLGYQCK-TANDGVDALNVLSKNHIDIVLSD   59 (133)
T ss_dssp             CCCEEEEEESSHHHHHHHHHHHHHHTSEEE-EECCSHHHHHHHHHSCCSEEEEE
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHcCCEEE-EECcHHHHHHHHhccCceEEEEe
Confidence            356899999999999999999888887542 33444444433334689999996


No 302
>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}
Probab=34.32  E-value=30  Score=22.94  Aligned_cols=59  Identities=12%  Similarity=0.008  Sum_probs=29.0

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCC
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPP  124 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP  124 (256)
                      |+|.++..+++.|.+.+.-.  ...+-+++..+...+.   .+..    ..+..+.     ....|+|+..-|
T Consensus         6 G~G~mg~~l~~~L~~~~~~~--~v~~R~~~~~~~l~~~---~~~~----~~~~~~~-----~~~~DiVil~v~   64 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIG--YILSRSIDRARNLAEV---YGGK----AATLEKH-----PELNGVVFVIVP   64 (153)
T ss_dssp             SCCHHHHHHHHTTC----CC--CEECSSHHHHHHHHHH---TCCC----CCSSCCC-----CC---CEEECSC
T ss_pred             eCcHHHHHHHHHHHhCCCEE--EEEeCChhhhcchhhc---cccc----ccchhhh-----hccCcEEEEecc
Confidence            78888888888876543322  2356666666555443   2211    1122222     245799998655


No 303
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=32.62  E-value=26  Score=23.42  Aligned_cols=54  Identities=15%  Similarity=0.056  Sum_probs=38.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHH--------HHHHHHHHHcCCc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAV--------EVTRKTLEAHNVH   96 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i--------~~a~~~~~~~~~~   96 (256)
                      .++..|+=++-|.|.+++++|..+.+.  +++|+-++.++...        ....+.+...++.
T Consensus        37 ~~~~~vvi~d~ggg~ig~e~A~~la~~--G~~Vtlv~~~~~~~~~~~~~~~~~~~~~l~~~GV~   98 (156)
T d1djqa2          37 KIGKRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVE   98 (156)
T ss_dssp             CCCSEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSCTTTHHHHTTCHHHHHHHHHHTTCE
T ss_pred             ccCCceEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCccccccchhHHHHHHHHHhhccce
Confidence            467888877788899999999998865  56899998765433        2334455555654


No 304
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.62  E-value=25  Score=23.46  Aligned_cols=46  Identities=13%  Similarity=0.052  Sum_probs=30.4

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      -.+++||=+|+|.  ++..-+..+.+.+.+..|++-|.+++....+.+
T Consensus        11 l~gkrvLViGgG~--va~~ka~~Ll~~GA~VtVvap~~~~~l~~~~~~   56 (150)
T d1kyqa1          11 LKDKRILLIGGGE--VGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGK   56 (150)
T ss_dssp             CTTCEEEEEEESH--HHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCG
T ss_pred             eCCCEEEEECCCH--HHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHh
Confidence            5789999999876  555556666554444445555778877665543


No 305
>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}
Probab=32.22  E-value=33  Score=20.32  Aligned_cols=43  Identities=21%  Similarity=0.174  Sum_probs=30.5

Q ss_pred             CCCCEEEEecc--cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           41 HHPVLCMEVGC--GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        41 ~~~~~VLDlGc--G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      +++.+||=.|.  |.|.+.+.+++.+     +++|+++--+++..+.+++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~-----G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKL-----GYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHT-----TCCEEEEESCGGGHHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHc-----CCeEEEEECCHHHHHHHHH
Confidence            46677877765  3455666666653     5689999989888887765


No 306
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}
Probab=32.13  E-value=70  Score=21.72  Aligned_cols=40  Identities=15%  Similarity=0.021  Sum_probs=26.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHH
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAV   83 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i   83 (256)
                      +..+|-=+|+  |.++..++..+....--..+.-+|++++..
T Consensus        19 ~~~KV~IIGa--G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          19 PNNKITVVGV--GQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CSSEEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCeEEEECC--CHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            4568888887  445555555554434445799999997665


No 307
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.91  E-value=14  Score=26.16  Aligned_cols=71  Identities=15%  Similarity=0.014  Sum_probs=43.3

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh-cCCCccEEEEC
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR-LAGLVDVMVVN  122 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~fD~Ii~n  122 (256)
                      .+||=.| |+|.++..+.+.|.+++....++++.-++.....       .....+++.+|..+...-. .-..+|.|+..
T Consensus         4 ~tVlVtG-atG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           4 PTVLVTG-ASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             CEEEEES-TTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEEC-CccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeeccccccccccccceeeEEE
Confidence            4666655 5677777788877666655667777767654322       2223478888876653211 11458988864


No 308
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.84  E-value=29  Score=22.38  Aligned_cols=52  Identities=19%  Similarity=0.212  Sum_probs=34.9

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC-------HHHHHHHHHHHHHcCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN-------PYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~-------~~~i~~a~~~~~~~~~~~   97 (256)
                      .+++++=+  |.|.+++++|..+.+.  +.+|+-++-+       +++.+.+.+.++..|++.
T Consensus        19 ~P~~vvII--GgG~iG~E~A~~l~~l--G~~Vtii~~~~~l~~~D~~~~~~l~~~l~~~Gv~i   77 (122)
T d1h6va2          19 CPGKTLVV--GASYVALECAGFLAGI--GLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKF   77 (122)
T ss_dssp             CCCSEEEE--CCSHHHHHHHHHHHHT--TCCEEEEESSSSSTTSCHHHHHHHHHHHHHTTEEE
T ss_pred             CCCeEEEE--CCCccHHHHHHHHhhc--CCeEEEEEechhhccCCHHHHHHHHHHHHHCCCEE
Confidence            44667766  5567888888887765  3466666543       456677777888777653


No 309
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=31.64  E-value=43  Score=21.00  Aligned_cols=52  Identities=17%  Similarity=0.240  Sum_probs=34.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC--------HHHHHHHHHHHHHcCCcc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN--------PYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~--------~~~i~~a~~~~~~~~~~~   97 (256)
                      -+++++=+|  .|..++++|..+.+.  +.+|+.+|..        +++.+.+++.+..+|++.
T Consensus        20 ~p~~vvIiG--gG~~G~E~A~~l~~~--g~~Vtlve~~~~il~~~d~~~~~~l~~~l~~~gV~i   79 (115)
T d1lvla2          20 LPQHLVVVG--GGYIGLELGIAYRKL--GAQVSVVEARERILPTYDSELTAPVAESLKKLGIAL   79 (115)
T ss_dssp             CCSEEEEEC--CSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEE
T ss_pred             CCCeEEEEC--CCHHHHHHHHHHhhc--ccceEEEeeeccccccccchhHHHHHHHHHhhcceE
Confidence            457787775  556666777777654  4578888764        445567777777777653


No 310
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.27  E-value=61  Score=20.78  Aligned_cols=51  Identities=12%  Similarity=0.178  Sum_probs=35.1

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh-----cCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR-----LAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|...--...|..+.+...     ....||+|+++
T Consensus         3 rVLvVDD~~~~~~~l~~~L~~~g~~~v~~a~~g~eAl~~l~~~~~~~~~~dlillD   58 (128)
T d2r25b1           3 KILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMD   58 (128)
T ss_dssp             CEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHcCCeEEEEEcChHHHHHHHHhhhhccCCCCEEEEE
Confidence            6888999999999999998888765311234544433211     24689999996


No 311
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=30.79  E-value=27  Score=26.90  Aligned_cols=71  Identities=17%  Similarity=0.154  Sum_probs=44.1

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh-cCCCccEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR-LAGLVDVMV  120 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~fD~Ii  120 (256)
                      .+.+||=.| |+|.++..+...|.++  +..|+++|.....-      ........++..+|+.+...-. ....+|.|+
T Consensus        14 ~nMKILVTG-gsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vi   84 (363)
T d2c5aa1          14 ENLKISITG-AGGFIASHIARRLKHE--GHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVF   84 (363)
T ss_dssp             SCCEEEEET-TTSHHHHHHHHHHHHT--TCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEEC-CCCHHHHHHHHHHHHC--cCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhhcCCeEe
Confidence            578899777 9999999999988765  45899999543210      0000011267777866542211 124689887


Q ss_pred             E
Q 025211          121 V  121 (256)
Q Consensus       121 ~  121 (256)
                      -
T Consensus        85 h   85 (363)
T d2c5aa1          85 N   85 (363)
T ss_dssp             E
T ss_pred             e
Confidence            5


No 312
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Probab=30.56  E-value=21  Score=23.32  Aligned_cols=52  Identities=15%  Similarity=0.123  Sum_probs=35.0

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC--------HHHHHHHHHHHHHcCCc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN--------PYAVEVTRKTLEAHNVH   96 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~--------~~~i~~a~~~~~~~~~~   96 (256)
                      ..+++++=+|  .|.+++++|..+.+.  +.+|+-++..        +++.+.+.+.+...++.
T Consensus        24 ~~p~~vvIiG--gG~IG~E~A~~~~~~--G~~Vtive~~~~il~~~d~~~~~~l~~~l~~~gv~   83 (125)
T d1ojta2          24 EVPGKLLIIG--GGIIGLEMGTVYSTL--GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDN   83 (125)
T ss_dssp             CCCSEEEEES--CSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEE
T ss_pred             ccCCeEEEEC--CCHHHHHHHHHhhcC--CCEEEEEEeeccccccchhhHHHHHHHHHHHcCcc
Confidence            3467888775  567777888876644  5678888654        46666777777766653


No 313
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=30.48  E-value=55  Score=20.81  Aligned_cols=51  Identities=24%  Similarity=0.296  Sum_probs=32.3

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH---------HHHHHHHHHHHHcCC
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP---------YAVEVTRKTLEAHNV   95 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~---------~~i~~a~~~~~~~~~   95 (256)
                      .++++|+=+  |.|.+++++|..+.+.  +.+|+.+|.++         ++.+..++.+...|+
T Consensus        28 ~~~k~vvVi--GgG~iG~E~A~~l~~~--g~~Vtlie~~~~~l~~~~d~~~~~~~~~~l~~~gv   87 (123)
T d1nhpa2          28 PEVNNVVVI--GSGYIGIEAAEAFAKA--GKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNI   87 (123)
T ss_dssp             TTCCEEEEE--CCSHHHHHHHHHHHHT--TCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTE
T ss_pred             cCCCEEEEE--CChHHHHHHHHHhhcc--ceEEEEEEecCcccccccchhhHHHHHHHhhcCCe
Confidence            456788776  5667777888877654  56788887543         333444555555444


No 314
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=30.40  E-value=13  Score=26.28  Aligned_cols=50  Identities=14%  Similarity=0.178  Sum_probs=36.1

Q ss_pred             HHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEecCC
Q 025211          152 IDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQRST  201 (256)
Q Consensus       152 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  201 (256)
                      .+.++..+.+..+.++..++........+.+...+.+.|+....++....
T Consensus        17 vd~ll~~i~~~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~   66 (181)
T d1t5la2          17 IDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIK   66 (181)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred             HHHHHHHHHHHHhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCcc
Confidence            46778888877777777666555555567788888888998877775443


No 315
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}
Probab=30.37  E-value=77  Score=21.63  Aligned_cols=76  Identities=14%  Similarity=0.149  Sum_probs=43.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcc--cCCCceEEEEeCCHHHHHHH----HHHHHHcCCcce-EEEcchhhchhhhcCC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQ--EVPGVQYIATDINPYAVEVT----RKTLEAHNVHAD-LINTDIASGLEKRLAG  114 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~--~~~~~~v~giD~~~~~i~~a----~~~~~~~~~~~~-~~~~d~~~~~~~~~~~  114 (256)
                      +.-+|.=+|+|+...+..+...+..  ......++-+|++++.++..    +......+.+.. ....|..+.+     .
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal-----~   76 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAF-----T   76 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHH-----S
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhcc-----C
Confidence            3457788899986544333333321  12235899999999887532    333333454443 3344554433     3


Q ss_pred             CccEEEEC
Q 025211          115 LVDVMVVN  122 (256)
Q Consensus       115 ~fD~Ii~n  122 (256)
                      ..|+|+..
T Consensus        77 ~AD~Vvit   84 (167)
T d1u8xx1          77 DVDFVMAH   84 (167)
T ss_dssp             SCSEEEEC
T ss_pred             CCCEEEEC
Confidence            57999883


No 316
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=30.37  E-value=62  Score=20.54  Aligned_cols=97  Identities=12%  Similarity=-0.006  Sum_probs=58.8

Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcH
Q 025211           70 GVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGR  149 (256)
Q Consensus        70 ~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~  149 (256)
                      +.+|.-+|-++...+..+..+...|.... ...+..+.+......+||+|+++.-                  -.+.+|.
T Consensus         3 ~~~ILiVDDd~~~~~~l~~~L~~~g~~v~-~a~~~~~al~~~~~~~~dlvi~D~~------------------mp~~~G~   63 (123)
T d1dbwa_           3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVK-MHQSAEAFLAFAPDVRNGVLVTDLR------------------MPDMSGV   63 (123)
T ss_dssp             CCEEEEEESSHHHHHHHHHHHHHTTCEEE-EESCHHHHHHHGGGCCSEEEEEECC------------------STTSCHH
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHhhcCCcEEEEecc------------------Cccccch
Confidence            34899999999999999999888887542 3345555544444578999999631                  1123343


Q ss_pred             HHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCc
Q 025211          150 AVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYA  192 (256)
Q Consensus       150 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~  192 (256)
                          .+++.+.+ ..|.-.+++++. ....+...+.+ +.|..
T Consensus        64 ----e~~~~lr~-~~~~~~iI~lt~-~~~~~~~~~a~-~~Ga~   99 (123)
T d1dbwa_          64 ----ELLRNLGD-LKINIPSIVITG-HGDVPMAVEAM-KAGAV   99 (123)
T ss_dssp             ----HHHHHHHH-TTCCCCEEEEEC-TTCHHHHHHHH-HTTCS
T ss_pred             ----HHHHHHHh-cCCCCeEEEEEe-eCCHHHHHHHH-HCCCC
Confidence                34444444 345555655443 44444544444 55654


No 317
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}
Probab=30.32  E-value=42  Score=24.39  Aligned_cols=79  Identities=10%  Similarity=0.032  Sum_probs=49.0

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh----------hhc
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE----------KRL  112 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~----------~~~  112 (256)
                      +++||=-|++ +.++.++++.|.+++....|+++.-+++.++.+++   ..+-...++..|+.+...          .+.
T Consensus         3 ~KtilITGas-sGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           3 PGSVVVTGAN-RGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CSEEEESSCS-SHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCEEEEeCCC-CHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            4778877765 55677788887765544578888877765554332   222334778888765421          111


Q ss_pred             CCCccEEEECCCC
Q 025211          113 AGLVDVMVVNPPY  125 (256)
Q Consensus       113 ~~~fD~Ii~npP~  125 (256)
                      ....|+++.|.-.
T Consensus        79 ~~~idilinnAG~   91 (250)
T d1yo6a1          79 SDGLSLLINNAGV   91 (250)
T ss_dssp             GGCCCEEEECCCC
T ss_pred             CCCeEEEEEcCcc
Confidence            2358999998754


No 318
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}
Probab=29.33  E-value=43  Score=22.75  Aligned_cols=71  Identities=13%  Similarity=0.119  Sum_probs=34.9

Q ss_pred             CCEEEEecccccHHHHHH-HHHhcccCCCceEEEE-eCCHH--HHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccE
Q 025211           43 PVLCMEVGCGSGYVITSL-ALMLGQEVPGVQYIAT-DINPY--AVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDV  118 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l-~~~l~~~~~~~~v~gi-D~~~~--~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~  118 (256)
                      ..+|-=+|||  .++-.+ .+.+ +..|...++++ +.+++  .++.+++    .+.  .+....+.+.........+|+
T Consensus         4 kirvaIIGaG--~ig~~~~~~~l-~~~~~~el~avas~~~~~~~~~~a~~----~~i--~~~~~~~d~l~~~~~~~~iDi   74 (157)
T d1nvmb1           4 KLKVAIIGSG--NIGTDLMIKVL-RNAKYLEMGAMVGIDAASDGLARAQR----MGV--TTTYAGVEGLIKLPEFADIDF   74 (157)
T ss_dssp             CEEEEEECCS--HHHHHHHHHHH-HHCSSEEEEEEECSCTTCHHHHHHHH----TTC--CEESSHHHHHHHSGGGGGEEE
T ss_pred             CcEEEEEcCc--HHHHHHHHHHH-hhCCcceEEEEEecchhccchhhhhh----cCC--cccccceeeeeecccccccCE
Confidence            3567778866  333322 2333 33677788776 55543  3344432    333  333333333222211246899


Q ss_pred             EEEC
Q 025211          119 MVVN  122 (256)
Q Consensus       119 Ii~n  122 (256)
                      |+.-
T Consensus        75 Vf~A   78 (157)
T d1nvmb1          75 VFDA   78 (157)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9874


No 319
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}
Probab=29.27  E-value=73  Score=21.04  Aligned_cols=58  Identities=12%  Similarity=0.105  Sum_probs=33.3

Q ss_pred             cccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           52 GSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        52 G~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      |+|.++.+++..+.+.  +.+++..+-+++..+...+.   .+...   ..+..+..     ...|+|+..
T Consensus         7 G~G~mG~al~~~l~~~--~~~i~v~~r~~~~~~~l~~~---~g~~~---~~~~~~~~-----~~~dvIila   64 (152)
T d2ahra2           7 GVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQ---LALPY---AMSHQDLI-----DQVDLVILG   64 (152)
T ss_dssp             CCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHH---HTCCB---CSSHHHHH-----HTCSEEEEC
T ss_pred             eccHHHHHHHHHHHhC--CCeEEEEcChHHhHHhhccc---cceee---echhhhhh-----hccceeeee
Confidence            5556666677766543  45889999888766654332   23321   12333322     357999864


No 320
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}
Probab=29.22  E-value=51  Score=25.07  Aligned_cols=36  Identities=22%  Similarity=0.376  Sum_probs=26.3

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      +.|+ +++|+|....-++..+....++.+|+++|...
T Consensus       177 D~vv-~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~~~  212 (331)
T d1tdja1         177 DRVF-VPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED  212 (331)
T ss_dssp             CEEE-EECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred             CEEE-EeCChhHHHHHHHHHHHHhCCCcEEEEecccc
Confidence            4443 68888877666677666667889999999653


No 321
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=29.18  E-value=93  Score=22.21  Aligned_cols=75  Identities=24%  Similarity=0.205  Sum_probs=40.1

Q ss_pred             EEecccccHHHHHHHHHhcccCCCceEEEEeCCH-HHHHHHHHHHHH-cCCcceEEEcchhhc------hhhh------c
Q 025211           47 MEVGCGSGYVITSLALMLGQEVPGVQYIATDINP-YAVEVTRKTLEA-HNVHADLINTDIASG------LEKR------L  112 (256)
Q Consensus        47 LDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~-~~i~~a~~~~~~-~~~~~~~~~~d~~~~------~~~~------~  112 (256)
                      |=-|++ +.++.++++.|.++  +++|+..|.+. ...+.+.+.+.. .+........+....      ....      .
T Consensus         5 lVTGas-~GIG~aia~~la~~--G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           5 VITGGA-RRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EETTCS-SHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEeCCC-CHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            334544 45777788877754  67999999774 444444444433 333333333322111      1000      1


Q ss_pred             CCCccEEEECCC
Q 025211          113 AGLVDVMVVNPP  124 (256)
Q Consensus       113 ~~~fD~Ii~npP  124 (256)
                      -+++|+++.|--
T Consensus        82 ~g~iDilvnnAG   93 (266)
T d1mxha_          82 FGRCDVLVNNAS   93 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence            167999998753


No 322
>d1oy0a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.79  E-value=38  Score=25.40  Aligned_cols=63  Identities=11%  Similarity=0.097  Sum_probs=44.4

Q ss_pred             CccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEE
Q 025211          115 LVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAAR  194 (256)
Q Consensus       115 ~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~  194 (256)
                      +--+++++.||..+...                    .+..++.+.++++.+|.=.+-........++.+.+.+.|..+.
T Consensus        77 ~~~~iv~DmPf~s~~~s--------------------~~~a~~nA~r~~~~~ga~avkleg~~~~~~~I~~L~~~gIPV~  136 (262)
T d1oy0a_          77 PHALVVADLPFGSYEAG--------------------PTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVM  136 (262)
T ss_dssp             TTSEEEEECCTTSSTTC--------------------HHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHTCCEE
T ss_pred             ccceeEecchhhhcccc--------------------hHHHHHHHHHHHhccccceeeechhhhhHHHHHHHHhcCCceE
Confidence            44688899998655332                    3677888899999888755544445455678888889998765


Q ss_pred             EEE
Q 025211          195 IVV  197 (256)
Q Consensus       195 ~~~  197 (256)
                      -..
T Consensus       137 gHi  139 (262)
T d1oy0a_         137 AHI  139 (262)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            443


No 323
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=28.25  E-value=29  Score=22.18  Aligned_cols=51  Identities=14%  Similarity=0.190  Sum_probs=36.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC--------CHHHHHHHHHHHHHcCCc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI--------NPYAVEVTRKTLEAHNVH   96 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~--------~~~~i~~a~~~~~~~~~~   96 (256)
                      .+++|+=+  |.|.+++++|..+.+.  +..|+-++-        ++++.+.+++.+..+|+.
T Consensus        21 ~p~~i~Ii--G~G~ig~E~A~~l~~~--G~~Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv~   79 (119)
T d3lada2          21 VPGKLGVI--GAGVIGLELGSVWARL--GAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLK   79 (119)
T ss_dssp             CCSEEEEE--CCSHHHHHHHHHHHHT--TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred             CCCeEEEE--CCChHHHHHHHHHHHc--CCceEEEEeecccCCcccchhHHHHHHHHHhcCce
Confidence            45778777  5567888888887754  567777773        466677778888777764


No 324
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}
Probab=28.20  E-value=37  Score=24.88  Aligned_cols=44  Identities=27%  Similarity=0.343  Sum_probs=31.9

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      ..+++|+=-|.|.  ++..+++.|.+.  ++.++++|+++..++.+..
T Consensus        37 l~g~~v~IqG~Gn--VG~~~a~~L~~~--Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          37 LEGLAVSVQGLGN--VAKALCKKLNTE--GAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             CTTCEEEEECCSH--HHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH
T ss_pred             CCCCEEEEECCCH--HHHHHHHHHHHC--CCEEEeecccHHHHHHHHH
Confidence            4688999888774  333466666543  6899999999988876554


No 325
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.11  E-value=38  Score=24.46  Aligned_cols=36  Identities=8%  Similarity=-0.005  Sum_probs=26.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      ++++||=.|++ |.++.++++.+.++  +++|..+|.++
T Consensus         1 egK~vlITGas-~GIG~a~a~~l~~~--G~~V~~~~~~~   36 (236)
T d1dhra_           1 EARRVLVYGGR-GALGSRCVQAFRAR--NWWVASIDVVE   36 (236)
T ss_dssp             CCCEEEEETTT-SHHHHHHHHHHHTT--TCEEEEEESSC
T ss_pred             CCCEEEEECCC-CHHHHHHHHHHHHC--CCEEEEEeCCc
Confidence            36888888876 44567777877654  67999999765


No 326
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.09  E-value=82  Score=21.21  Aligned_cols=122  Identities=13%  Similarity=0.060  Sum_probs=66.6

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVV  121 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~  121 (256)
                      ++.++| +.|.+=...-.++..|...+..+..+--|.+....+.+-..+.. +...-++..|+..-....  ...|.||.
T Consensus        31 ~~~k~i-VF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~-~~~~ilv~Td~~~~Gid~--~~v~~VI~  106 (171)
T d1s2ma2          31 QINQAI-IFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQ-GKVRTLVCSDLLTRGIDI--QAVNVVIN  106 (171)
T ss_dssp             CCSEEE-EECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHT-TSSSEEEESSCSSSSCCC--TTEEEEEE
T ss_pred             CCCceE-EEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhccc-CccccccchhHhhhcccc--ceeEEEEe
Confidence            456777 88998877777777776554444444446776665555555542 322255566654443222  35676654


Q ss_pred             -CCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhcccc--CeEEEEEEeCCCCHHHHHHHHHHcCCcE
Q 025211          122 -NPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSK--RGWLYLVTLTANDPSQICLQMMEKGYAA  193 (256)
Q Consensus       122 -npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp--gG~l~~~~~~~~~~~~~~~~~~~~g~~~  193 (256)
                       ++|+.                         ...+++++-+.-+-  .|.++.. ........+....+..+.+.
T Consensus       107 ~d~p~~-------------------------~~~y~qr~GR~gR~g~~g~~i~~-v~~~e~~~~~~i~~~l~~~~  155 (171)
T d1s2ma2         107 FDFPKT-------------------------AETYLHRIGRSGRFGHLGLAINL-INWNDRFNLYKIEQELGTEI  155 (171)
T ss_dssp             SSCCSS-------------------------HHHHHHHHCBSSCTTCCEEEEEE-ECGGGHHHHHHHHHHHTCCC
T ss_pred             cCCcch-------------------------HHHHHHHhhhcccCCCccEEEEE-eCHHHHHHHHHHHHHHCCCC
Confidence             66643                         45677776555442  3555442 22333444444444445443


No 327
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=27.76  E-value=55  Score=21.80  Aligned_cols=39  Identities=15%  Similarity=0.072  Sum_probs=22.5

Q ss_pred             CCCEEEEecccccHH-HHHHHHHhcccCCCceEEEEeCCH
Q 025211           42 HPVLCMEVGCGSGYV-ITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~-~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      ..++||=|+.|+|.- .+.+++.+.++.....++-.--++
T Consensus         7 ~~~kvllIAgG~GitPl~sm~~~l~~~~~~v~l~~g~r~~   46 (160)
T d1ep3b2           7 STDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLGFASE   46 (160)
T ss_dssp             TTSEEEEEEEGGGSHHHHHHHHHHHHHTCEEEEEEEESSG
T ss_pred             CCCEEEEEEeeeeHHHHHHHHHHHHhccCceEEEEecCCH
Confidence            567899999999963 344455555443334433333333


No 328
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}
Probab=27.73  E-value=19  Score=27.98  Aligned_cols=75  Identities=13%  Similarity=0.037  Sum_probs=38.3

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHH-----HHHHHHHcCCcceEEEcchhhchh--h-hcCCCc
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEV-----TRKTLEAHNVHADLINTDIASGLE--K-RLAGLV  116 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~-----a~~~~~~~~~~~~~~~~d~~~~~~--~-~~~~~f  116 (256)
                      +||=.| |+|.++-.+...|.++  +..|+|+|..+.....     .............++.+|+.+...  . +....+
T Consensus         3 ~vLITG-atGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (357)
T d1db3a_           3 VALITG-VTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (357)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             EEEEeC-CCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence            444444 5688888888887654  5689999975433221     111111111123778888765431  1 112367


Q ss_pred             cEEEEC
Q 025211          117 DVMVVN  122 (256)
Q Consensus       117 D~Ii~n  122 (256)
                      |.|+--
T Consensus        80 d~v~h~   85 (357)
T d1db3a_          80 DEVYNL   85 (357)
T ss_dssp             SEEEEC
T ss_pred             CEEEEe
Confidence            988764


No 329
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}
Probab=27.71  E-value=85  Score=21.33  Aligned_cols=76  Identities=14%  Similarity=0.129  Sum_probs=42.5

Q ss_pred             CCCEEEEecccccHHHHHHHHHh--cccCCCceEEEEeCCHHHHHHHHHH----HHHcCCcceEE-EcchhhchhhhcCC
Q 025211           42 HPVLCMEVGCGSGYVITSLALML--GQEVPGVQYIATDINPYAVEVTRKT----LEAHNVHADLI-NTDIASGLEKRLAG  114 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l--~~~~~~~~v~giD~~~~~i~~a~~~----~~~~~~~~~~~-~~d~~~~~~~~~~~  114 (256)
                      |..+|-=+|+|+-.++..+...+  .......+++-+|++++.++.....    ....+.+.++. ..|..+.+     .
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL-----~   75 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVI-----I   75 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHH-----T
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcc-----c
Confidence            35678889998765554433222  2223345899999999877643322    22233333332 33444433     3


Q ss_pred             CccEEEEC
Q 025211          115 LVDVMVVN  122 (256)
Q Consensus       115 ~fD~Ii~n  122 (256)
                      ..|+|++.
T Consensus        76 dad~Vv~~   83 (171)
T d1obba1          76 DADFVINT   83 (171)
T ss_dssp             TCSEEEEC
T ss_pred             CCCeEeee
Confidence            47888874


No 330
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=27.33  E-value=39  Score=24.85  Aligned_cols=51  Identities=16%  Similarity=0.137  Sum_probs=29.9

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      .+.+.....+-+..  ...+++|+=||+|.+.++  +|..|.++  +.+|+.+|-++
T Consensus        13 ~~~~~~~~~~~~~~--~~~pkkV~IIGaG~aGLs--aA~~L~~~--G~~V~vlE~~~   63 (370)
T d2iida1          13 YEEFLEIARNGLKA--TSNPKHVVIVGAGMAGLS--AAYVLAGA--GHQVTVLEASE   63 (370)
T ss_dssp             HHHHHHHHHHCSCC--CSSCCEEEEECCBHHHHH--HHHHHHHH--TCEEEEECSSS
T ss_pred             HHHHHHHHhcCCCC--CCCCCeEEEECCCHHHHH--HHHHHHHC--CCCEEEEeCCC
Confidence            34444444443332  246789999999988765  34444443  34677776543


No 331
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=27.27  E-value=75  Score=20.51  Aligned_cols=50  Identities=4%  Similarity=0.040  Sum_probs=37.2

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|.... ...+..+...-.....||+|+++
T Consensus         2 kILiVDDd~~~~~~l~~~L~~~g~~v~-~a~~~~eAl~~l~~~~~dlvilD   51 (137)
T d1ny5a1           2 NVLVIEDDKVFRGLLEEYLSMKGIKVE-SAERGKEAYKLLSEKHFNVVLLD   51 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHHTCEEE-EESSHHHHHHHHHHSCCSEEEEE
T ss_pred             EEEEEecCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHhhccccccchHH
Confidence            578899999999999999988887543 34555555443344789999996


No 332
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=26.81  E-value=83  Score=20.85  Aligned_cols=39  Identities=8%  Similarity=-0.163  Sum_probs=20.9

Q ss_pred             EEEEecccc-cHH-HHHHHHHhcccCCCceEEE-EeCCHHHHHHHH
Q 025211           45 LCMEVGCGS-GYV-ITSLALMLGQEVPGVQYIA-TDINPYAVEVTR   87 (256)
Q Consensus        45 ~VLDlGcG~-G~~-~~~l~~~l~~~~~~~~v~g-iD~~~~~i~~a~   87 (256)
                      +|.=+|||. |.- -+.+...    .++..+++ .|.+++..+...
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~----~~~~~i~~v~d~~~~~~~~~~   44 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAA----ASDWTLQGAWSPTRAKALPIC   44 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHS----CSSEEEEEEECSSCTTHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHh----CCCcEEEEEEechhHhhhhhh
Confidence            567788875 321 1222222    46677665 477766554433


No 333
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}
Probab=26.69  E-value=24  Score=25.13  Aligned_cols=36  Identities=14%  Similarity=-0.049  Sum_probs=25.1

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY   81 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~   81 (256)
                      .+|.=||+|...++  +|..|.+...+..|+.+|-.+.
T Consensus         2 ~kv~iIGaGpaGl~--aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGSGPAGFY--TAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECCSHHHHH--HHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECccHHHHH--HHHHHHhcCCCCeEEEEeCCCC
Confidence            36777888887765  4554544456778999998764


No 334
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=26.64  E-value=32  Score=24.84  Aligned_cols=34  Identities=15%  Similarity=0.146  Sum_probs=23.5

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      +|+|+=||.|.+.++  +|..|.+.  +.+|+.+|-++
T Consensus         1 ~KkV~IIGaG~aGL~--aA~~La~~--G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLA--AAYKLKIH--GLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHH--HHHHHHTT--SCEEEEECSSS
T ss_pred             CCEEEEECcCHHHHH--HHHHHHhC--CCCEEEEeCCC
Confidence            478999999977655  45555543  56888888643


No 335
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=26.03  E-value=45  Score=21.19  Aligned_cols=47  Identities=11%  Similarity=0.016  Sum_probs=32.5

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|.  -....+..+.+..  ...||+|+++
T Consensus         4 kILiVDDd~~~~~~l~~~L~~~g~--v~~~~~~~~al~~--~~~~dlillD   50 (120)
T d1p2fa2           4 KIAVVDDDKNILKKVSEKLQQLGR--VKTFLTGEDFLND--EEAFHVVVLD   50 (120)
T ss_dssp             EEEEECSCHHHHHHHHHHHTTTEE--EEEESSHHHHHHC--CSCCSEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCE--EEEECCHHHHHhc--CCCCCEEEEe
Confidence            688999999999988888765552  2223344444332  4579999996


No 336
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.55  E-value=25  Score=26.83  Aligned_cols=72  Identities=14%  Similarity=0.107  Sum_probs=42.3

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCC----------HHHHHHHHHHHHHcCCcceEEEcchhhchh--h-
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN----------PYAVEVTRKTLEAHNVHADLINTDIASGLE--K-  110 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~----------~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~-  110 (256)
                      ++||=. -|+|.++-.+.+.|.+.  +..|+++|.-          +...+....   .......++.+|+.+...  . 
T Consensus         3 kKILIT-G~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~l~~~   76 (346)
T d1ek6a_           3 EKVLVT-GGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQE---LTGRSVEFEEMDILDQGALQRL   76 (346)
T ss_dssp             SEEEEE-TTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHH---HHTCCCEEEECCTTCHHHHHHH
T ss_pred             CeEEEE-CCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHH---hcCCCcEEEEeecccccccccc
Confidence            577744 57899999998887654  4589999831          122222211   122334889999875521  1 


Q ss_pred             hcCCCccEEEE
Q 025211          111 RLAGLVDVMVV  121 (256)
Q Consensus       111 ~~~~~fD~Ii~  121 (256)
                      ......|+|+.
T Consensus        77 ~~~~~~~~i~h   87 (346)
T d1ek6a_          77 FKKYSFMAVIH   87 (346)
T ss_dssp             HHHCCEEEEEE
T ss_pred             ccccccccccc
Confidence            22345666654


No 337
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.41  E-value=1.2e+02  Score=22.28  Aligned_cols=84  Identities=20%  Similarity=0.191  Sum_probs=42.7

Q ss_pred             CEEEEe-cccccHHHHHHHHHhcccCCC-ceEEEEeCCHHHHHHHHHHHHH---cCCcceEEEcchhhchh------hhc
Q 025211           44 VLCMEV-GCGSGYVITSLALMLGQEVPG-VQYIATDINPYAVEVTRKTLEA---HNVHADLINTDIASGLE------KRL  112 (256)
Q Consensus        44 ~~VLDl-GcG~G~~~~~l~~~l~~~~~~-~~v~giD~~~~~i~~a~~~~~~---~~~~~~~~~~d~~~~~~------~~~  112 (256)
                      ++|.=| |+++| ++.++++.+.+++.. ..+....-+.+..+...+....   .+.....+..|+.+...      ...
T Consensus         2 kkVvlITGassG-IG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSH-HHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCH-HHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            345444 65554 567777777654332 1233333333333333332222   23334677778765421      123


Q ss_pred             CCCccEEEECCCCCCC
Q 025211          113 AGLVDVMVVNPPYVPT  128 (256)
Q Consensus       113 ~~~fD~Ii~npP~~~~  128 (256)
                      .+..|+++.|--....
T Consensus        81 ~g~idilvnnag~~~~   96 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLL   96 (285)
T ss_dssp             TSCCSEEEECCCCCCC
T ss_pred             ccchhhhhhccccccc
Confidence            4789999988654443


No 338
>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}
Probab=25.38  E-value=62  Score=18.96  Aligned_cols=43  Identities=5%  Similarity=-0.157  Sum_probs=32.8

Q ss_pred             HHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEEEEe
Q 025211          156 LPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARIVVQ  198 (256)
Q Consensus       156 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  198 (256)
                      ++...+-+.+|..+.+.........++.+++...|+....+..
T Consensus        26 ~k~al~~~~~G~~l~v~~dd~~a~~di~~~~~~~g~~~~~~~~   68 (81)
T d1dcja_          26 VRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKET   68 (81)
T ss_dssp             HHHHHHHCCTTCCEEEEECSTTHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHHHHHhCCCCCEEEEEeCCCcHHHHHHHHHHHcCCEEEEEEE
Confidence            4445556889998888776677778899999999998766553


No 339
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}
Probab=25.34  E-value=18  Score=26.80  Aligned_cols=76  Identities=18%  Similarity=0.084  Sum_probs=39.5

Q ss_pred             EEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE-cchhhchhhh--cCCCccEEEEC
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN-TDIASGLEKR--LAGLVDVMVVN  122 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~-~d~~~~~~~~--~~~~fD~Ii~n  122 (256)
                      +|=-|++.| ++.++++.|.++  +++|+..|.+.+..+.++....... ..++.. .+..+.....  .-++.|++|.|
T Consensus         3 AlVTGas~G-iG~aiA~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~-~~dv~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           3 AIVTNVKHF-GGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYP-QLKPMSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEESSTTST-THHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCT-TSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEECCCCH-HHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhhhCcEE-EeccCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            343455444 344556666543  6799999988777766655433321 112111 1222211110  12689999987


Q ss_pred             CCC
Q 025211          123 PPY  125 (256)
Q Consensus       123 pP~  125 (256)
                      --+
T Consensus        79 Ag~   81 (252)
T d1zmta1          79 DIF   81 (252)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            543


No 340
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}
Probab=25.23  E-value=86  Score=20.54  Aligned_cols=37  Identities=19%  Similarity=0.123  Sum_probs=23.6

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHH
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVE   84 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~   84 (256)
                      +|-=+|+  |.++..++..+.... =+.+..+|++++..+
T Consensus         3 KI~IIGa--G~VG~~~A~~l~~~~-l~dl~l~D~~~~~~~   39 (142)
T d1uxja1           3 KISIIGA--GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQ   39 (142)
T ss_dssp             EEEEECC--SHHHHHHHHHHHHHT-CSEEEEECSSSSHHH
T ss_pred             eEEEECC--CHHHHHHHHHHHhCC-cceEEEEeeccccch
Confidence            5666775  656666665554332 248999999887544


No 341
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=25.19  E-value=77  Score=19.97  Aligned_cols=51  Identities=12%  Similarity=0.002  Sum_probs=38.5

Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           71 VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        71 ~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      ..|..+|-++...+..+..+...|.... ...+..+.........||+|+++
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~-~a~~~~~a~~~l~~~~~dlii~D   54 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCT-TFENGNEVLAALASKTPDVLLSD   54 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEE-EESSSHHHHHHHTTCCCSEEEEC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEE-EeCCHHHHHHHHHhCCCCEEEeh
Confidence            3799999999999999999988777543 34455555544456789999996


No 342
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}
Probab=25.18  E-value=74  Score=19.77  Aligned_cols=52  Identities=6%  Similarity=0.028  Sum_probs=34.1

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH--------HHHHHHHHHHHHcCCc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP--------YAVEVTRKTLEAHNVH   96 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~--------~~i~~a~~~~~~~~~~   96 (256)
                      .++++|+=+|+|  .+++++|..+.+.  +..++.++..+        ...+...+.+...+++
T Consensus        20 ~~~~~vvVvGgG--~ig~E~A~~l~~~--g~~vt~i~~~~~~l~~~d~~~~~~~~~~l~~~gI~   79 (121)
T d1mo9a2          20 EPGSTVVVVGGS--KTAVEYGCFFNAT--GRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGME   79 (121)
T ss_dssp             CCCSEEEEECCS--HHHHHHHHHHHHT--TCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCE
T ss_pred             CCCCEEEEECCC--HHHHHHHHHHHhc--chhheEeeccchhhcccccchhhhhhhhhhccccE
Confidence            467899877654  5666677776643  55788888554        3445566666666654


No 343
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=25.07  E-value=77  Score=19.92  Aligned_cols=51  Identities=10%  Similarity=0.175  Sum_probs=35.4

Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhc-CCCccEEEEC
Q 025211           71 VQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRL-AGLVDVMVVN  122 (256)
Q Consensus        71 ~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~fD~Ii~n  122 (256)
                      .+|..+|-++...+..+..+...|.... ...+..+.+.... ...||+|+++
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~~dliilD   54 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVT-VHPSGSAFFQHRSQLSTCDLLIVS   54 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEE-EESSHHHHHHTGGGGGSCSEEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeE-EECCHHHHHHHHHhcCCCCEEEEe
Confidence            4799999999999999999988877542 2234334332222 2469999996


No 344
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}
Probab=24.63  E-value=70  Score=23.81  Aligned_cols=34  Identities=29%  Similarity=0.468  Sum_probs=25.5

Q ss_pred             EEEecccccHHHHHHHHHhcccCCCceEEEEeCC
Q 025211           46 CMEVGCGSGYVITSLALMLGQEVPGVQYIATDIN   79 (256)
Q Consensus        46 VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~   79 (256)
                      .+=+.+|+|....-++..+....|..+++|++..
T Consensus       169 ~vv~~vG~Gg~~~Gi~~~~~~~~~~~~iigve~~  202 (302)
T d1ve1a1         169 AFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPA  202 (302)
T ss_dssp             EEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEG
T ss_pred             eEEEeecCcHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            4445677777666677777777889999999964


No 345
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.26  E-value=34  Score=25.20  Aligned_cols=37  Identities=14%  Similarity=0.111  Sum_probs=25.7

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      .++..+|+=||+|-+.++  +|..|.+.  +.+|+.+|-++
T Consensus         2 ~~~~~kViVIGaG~aGL~--aA~~L~~~--G~~V~VlEa~~   38 (449)
T d2dw4a2           2 TKKTGKVIIIGSGVSGLA--AARQLQSF--GMDVTLLEARD   38 (449)
T ss_dssp             SSCCCEEEEECCBHHHHH--HHHHHHHT--TCEEEEECSSS
T ss_pred             CCCCCcEEEECCCHHHHH--HHHHHHhC--CCCEEEEeCCC
Confidence            467788999999987765  45555543  45777777654


No 346
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}
Probab=24.06  E-value=1.6e+02  Score=23.12  Aligned_cols=123  Identities=16%  Similarity=0.231  Sum_probs=68.3

Q ss_pred             hHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEe-CCHHHHHHHHHHHHHcCCcceEEEc
Q 025211           24 SFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATD-INPYAVEVTRKTLEAHNVHADLINT  102 (256)
Q Consensus        24 ~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD-~~~~~i~~a~~~~~~~~~~~~~~~~  102 (256)
                      +...++..+..+.     .+...+=..+|-+.++..+...+   .++..|++.+ +-....+.++..+...|+...++..
T Consensus        60 T~~~LE~~la~LE-----g~~~a~~~~SGmaAi~~~l~~l~---~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~  131 (392)
T d1gc0a_          60 TLNLLEARMASLE-----GGEAGLALASGMGAITSTLWTLL---RPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM  131 (392)
T ss_dssp             HHHHHHHHHHHHH-----TCSEEEEESSHHHHHHHHHHHHC---CTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHh-----CCcceeehhhHHHHHHHHHHhhc---cCCCeeecccccchhhhhhhhhhhccCCcccccCCc
Confidence            5555565555553     34566656666666655544443   3455777666 5566677777777777776655432


Q ss_pred             -chhhchhhhcCCCccEEEECCCCCCCCCcccccccchhhhcCCCCcHHHHHHHHHHHhhccccCeEEEEEEeCCC
Q 025211          103 -DIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGREGIASAWAGGENGRAVIDKILPSADKLLSKRGWLYLVTLTAN  177 (256)
Q Consensus       103 -d~~~~~~~~~~~~fD~Ii~npP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~  177 (256)
                       |..+. .......-++|++--|-.+.-.-              .+        ++.+.++-+..|.++++..++.
T Consensus       132 ~d~~~~-~~ai~~~t~lv~~Esp~NP~l~v--------------~D--------i~~i~~ia~~~g~~~vvDnT~a  184 (392)
T d1gc0a_         132 ADLQAL-EAAMTPATRVIYFESPANPNMHM--------------AD--------IAGVAKIARKHGATVVVDNTYC  184 (392)
T ss_dssp             TCHHHH-HHHCCTTEEEEEEESSCTTTCCC--------------CC--------HHHHHHHHGGGTCEEEEECTTT
T ss_pred             cCHHHH-HHhCCCCCeEEEecccccceeee--------------cc--------hHHHHHHHHhcCCEEEEecCcc
Confidence             33332 22234567889884432221110              00        4444455566788888776553


No 347
>d1gtza_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Streptomyces coelicolor [TaxId: 1902]}
Probab=23.99  E-value=5.2  Score=27.70  Aligned_cols=60  Identities=22%  Similarity=0.216  Sum_probs=39.4

Q ss_pred             HhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhh---cCCCccEEEECCC
Q 025211           63 MLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKR---LAGLVDVMVVNPP  124 (256)
Q Consensus        63 ~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~fD~Ii~npP  124 (256)
                      +|+.|.|  .++|.+.-++.-+.+++.....++..++++.+.+..+..+   ....+|.|+.||-
T Consensus        18 lLG~Rep--~iYG~~tL~~i~~~~~~~a~~~~~~v~~~QSN~EgelId~I~~~~~~~~giIINpg   80 (149)
T d1gtza_          18 LLGQAQP--EIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPA   80 (149)
T ss_dssp             GTTTSCH--HHHCSCCHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHHHHHCSEEEEECT
T ss_pred             ccCCCCC--ccCCccCHHHHHHHHHHHHHHcCCeEEeehhhhHHHHHHHHHHHhhccceeEeccH
Confidence            4555544  5777665455556677777777887788888765444321   1246899999984


No 348
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}
Probab=23.24  E-value=75  Score=19.75  Aligned_cols=53  Identities=19%  Similarity=0.191  Sum_probs=33.1

Q ss_pred             CCCEEEEecccccHHHHHHHHHhccc-CCCceEEEEeCC--------HHHHHHHHHHHHHcCCc
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQE-VPGVQYIATDIN--------PYAVEVTRKTLEAHNVH   96 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~-~~~~~v~giD~~--------~~~i~~a~~~~~~~~~~   96 (256)
                      .+++|+=+|.|  .+++++|..+.+. ..+..|+.++-+        ++..+.+++.+..+|++
T Consensus        17 ~p~~v~IiGgG--~ig~E~A~~l~~~~~~g~~Vtli~~~~~il~~~d~~~~~~~~~~l~~~GI~   78 (117)
T d1feca2          17 APKRALCVGGG--YISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGIN   78 (117)
T ss_dssp             CCSEEEEECSS--HHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred             cCCeEEEECCC--hHHHHHHHHhHhhcccccccceecccccccccccchhhHHHHHHHhhCcEE
Confidence            45788877554  5555666543321 125678888754        45667777778777764


No 349
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=23.14  E-value=43  Score=25.36  Aligned_cols=76  Identities=13%  Similarity=0.000  Sum_probs=45.2

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh--h-hcCCCccE
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE--K-RLAGLVDV  118 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~-~~~~~fD~  118 (256)
                      .+++||=.| |+|.++..++..|.++  +..|+++|.++.......+.. ...-..+++.+|+.+...  . .....+|+
T Consensus         7 ~~KkILVTG-~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           7 QGKRVFVTG-HTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREFQPEI   82 (356)
T ss_dssp             TTCEEEEET-TTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEEC-CCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhchhhh
Confidence            578999886 4599998898888765  468999997654322211111 011123788888765421  1 11234677


Q ss_pred             EEE
Q 025211          119 MVV  121 (256)
Q Consensus       119 Ii~  121 (256)
                      |+.
T Consensus        83 v~~   85 (356)
T d1rkxa_          83 VFH   85 (356)
T ss_dssp             EEE
T ss_pred             hhh
Confidence            665


No 350
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Probab=22.99  E-value=99  Score=20.42  Aligned_cols=71  Identities=21%  Similarity=0.194  Sum_probs=38.6

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHH-H---cCCcceEEEcchhhchhhhcCCCccEE
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLE-A---HNVHADLINTDIASGLEKRLAGLVDVM  119 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~-~---~~~~~~~~~~d~~~~~~~~~~~~fD~I  119 (256)
                      ++|-=+|+  |.++..++..+..+.--..++.+|++++..+.-..-+. .   ...+..+...|..+.      ...|+|
T Consensus         2 kKI~IIGa--G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l------~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL--GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAAL------ADADVV   73 (146)
T ss_dssp             CEEEEECC--SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGG------TTCSEE
T ss_pred             CeEEEECc--CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHh------ccccEE
Confidence            45666775  45555555544333333489999999987543222122 1   122225555554443      356998


Q ss_pred             EEC
Q 025211          120 VVN  122 (256)
Q Consensus       120 i~n  122 (256)
                      +..
T Consensus        74 Vit   76 (146)
T d1hyha1          74 IST   76 (146)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            874


No 351
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}
Probab=22.79  E-value=98  Score=20.29  Aligned_cols=37  Identities=16%  Similarity=0.216  Sum_probs=20.4

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHH
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAV   83 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i   83 (256)
                      +|-=+|+  |.++..++..+..+.-...+.-+|++++..
T Consensus         3 KI~IIGa--G~VG~~~a~~l~~~~l~~el~L~D~~~~~~   39 (142)
T d1y6ja1           3 KVAIIGA--GFVGASAAFTMALRQTANELVLIDVFKEKA   39 (142)
T ss_dssp             CEEEECC--SHHHHHHHHHHHHTTCSSEEEEECCC---C
T ss_pred             eEEEECC--CHHHHHHHHHHHhcCCCCEEEEEeccCCcc
Confidence            4555676  555555555444333334799999998754


No 352
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.71  E-value=86  Score=19.62  Aligned_cols=50  Identities=8%  Similarity=0.014  Sum_probs=36.3

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..+..+...|... ....+..+.........||+|+++
T Consensus         2 rILvVDDd~~~~~~l~~~L~~~G~~v-~~a~~g~eal~~l~~~~~dliilD   51 (119)
T d2pl1a1           2 RVLVVEDNALLRHHLKVQIQDAGHQV-DDAEDAKEADYYLNEHIPDIAIVD   51 (119)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEE-EEESSHHHHHHHHHHSCCSEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEE-EEECCHHHHHHHHHhcccceeehh
Confidence            57889999999999999888877653 233444444443345789999996


No 353
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}
Probab=22.56  E-value=85  Score=19.53  Aligned_cols=55  Identities=20%  Similarity=0.221  Sum_probs=34.7

Q ss_pred             CCCCEEEEecccccHHHHHHHHHhcccCC-CceEEEEeC--------CHHHHHHHHHHHHHcCCcc
Q 025211           41 HHPVLCMEVGCGSGYVITSLALMLGQEVP-GVQYIATDI--------NPYAVEVTRKTLEAHNVHA   97 (256)
Q Consensus        41 ~~~~~VLDlGcG~G~~~~~l~~~l~~~~~-~~~v~giD~--------~~~~i~~a~~~~~~~~~~~   97 (256)
                      ..+++|+=+|.  |..++++|..+..... +.+|+.++-        ++.+.+...+.+...|++.
T Consensus        18 ~~p~~v~ivGg--G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL~~~d~~~~~~l~~~l~~~GV~v   81 (117)
T d1aoga2          18 EPPRRVLTVGG--GFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLTANGIQI   81 (117)
T ss_dssp             SCCSEEEEECS--SHHHHHHHHHHHHHCCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             hcCCeEEEECC--cHHHHHHHHHhhhcccCCcEEEEEeccchhhcccchHHHHHHHHHHHhcCcEE
Confidence            34678887766  5566666654332222 357888875        3556677778888877653


No 354
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}
Probab=22.19  E-value=1e+02  Score=23.17  Aligned_cols=57  Identities=11%  Similarity=0.007  Sum_probs=27.7

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEE---------cchhhchhhhcCCCccEEEECCCCCC
Q 025211           68 VPGVQYIATDINPYAVEVTRKTLEAHNVHADLIN---------TDIASGLEKRLAGLVDVMVVNPPYVP  127 (256)
Q Consensus        68 ~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~---------~d~~~~~~~~~~~~fD~Ii~npP~~~  127 (256)
                      .|+-.|...+.+-..+..+-+   ..+.....+.         .|..............+|+.+.|..+
T Consensus        80 ~~gd~Vlv~~P~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NP  145 (361)
T d1d2fa_          80 ETGEGVVIHTPAYDAFYKAIE---GNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNP  145 (361)
T ss_dssp             CTTCEEEEEESCCHHHHHHHH---HTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTT
T ss_pred             ccccccccccccccchhHHHH---hhcceEEeecccccccccccccccchhhcccCCceeEEecccccc
Confidence            356688888876555433322   3333321111         23322222223456778887666444


No 355
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}
Probab=21.95  E-value=1e+02  Score=20.08  Aligned_cols=39  Identities=15%  Similarity=0.117  Sum_probs=25.0

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHH
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEV   85 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~   85 (256)
                      +|.=+|.  |.++..++..+.....-.++..+|+++...+.
T Consensus         2 KI~IIGa--G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~   40 (142)
T d1guza1           2 KITVIGA--GNVGATTAFRLAEKQLARELVLLDVVEGIPQG   40 (142)
T ss_dssp             EEEEECC--SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHH
T ss_pred             EEEEECc--CHHHHHHHHHHHhCCCCceEEEeccccccchh
Confidence            3455664  66666666665443434589999999876543


No 356
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=21.46  E-value=57  Score=22.71  Aligned_cols=41  Identities=20%  Similarity=0.204  Sum_probs=27.2

Q ss_pred             CEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHH
Q 025211           44 VLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRK   88 (256)
Q Consensus        44 ~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~   88 (256)
                      .+|.=+|||.-  +.+++..|.+.  +..|+..+.+++.++...+
T Consensus         8 ~KI~ViGaG~w--GtAlA~~La~~--g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSGAF--GTALAMVLSKK--CREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCSHH--HHHHHHHHHTT--EEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECCCHH--HHHHHHHHHHc--CCeEEEEEecHHHHHHHhh
Confidence            46777877764  44466666532  3478888889888776544


No 357
>d2c4va1 c.23.13.1 (A:1-158) Type II 3-dehydroquinate dehydratase {Helicobacter pylori [TaxId: 210]}
Probab=21.12  E-value=14  Score=25.65  Aligned_cols=60  Identities=17%  Similarity=0.285  Sum_probs=34.8

Q ss_pred             HhcccCCCceEEEEeCCHHHHHHHHHHHHHcC--CcceEEEcchhhchhh----hcCCCccEEEECCC
Q 025211           63 MLGQEVPGVQYIATDINPYAVEVTRKTLEAHN--VHADLINTDIASGLEK----RLAGLVDVMVVNPP  124 (256)
Q Consensus        63 ~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~--~~~~~~~~d~~~~~~~----~~~~~fD~Ii~npP  124 (256)
                      +|+.|.|  .++|...-++..+.+++..+..+  +..++++.+.+..+..    .....+|-||.||-
T Consensus        13 lLG~Re~--~iYG~~TL~~i~~~~~~~a~~~~l~v~l~~~QSN~EgelId~I~~a~~~~~dgiIINPg   78 (158)
T d2c4va1          13 MLGHRDP--RLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPG   78 (158)
T ss_dssp             GTTSSCH--HHHTTCCHHHHHHHHHHHHHHHTCCCEEEEEECSCHHHHHHHHHHTTSTTEEEEEEECG
T ss_pred             ccCCCCC--ccCCccCHHHHHHHHHHHHHHcCCceehhhHHHhHHHHHHHHHHHHhCCCcceEEecch
Confidence            3444433  46665544455555666555544  4447778775544332    22346999999984


No 358
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.11  E-value=53  Score=23.74  Aligned_cols=72  Identities=18%  Similarity=0.148  Sum_probs=45.0

Q ss_pred             cCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHHHHHHHHHHHHHcCCcceEEEcchhhchh------hh--
Q 025211           40 EHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPYAVEVTRKTLEAHNVHADLINTDIASGLE------KR--  111 (256)
Q Consensus        40 ~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~------~~--  111 (256)
                      +..++++|=-|++.| ++.++++.+.++  +++|+.+|.+++..+           ....+..|+.+...      ..  
T Consensus         4 sl~gK~~lITGas~G-IG~aia~~la~~--Ga~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           4 PFVSRSVLVTGGNRG-IGLAIAQRLAAD--GHKVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCEEEETTTTSH-HHHHHHHHHHHT--TCEEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCH-HHHHHHHHHHHC--CCEEEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHHH
Confidence            347889988887654 566677777654  679999998754321           12455566554321      00  


Q ss_pred             cCCCccEEEECCCC
Q 025211          112 LAGLVDVMVVNPPY  125 (256)
Q Consensus       112 ~~~~fD~Ii~npP~  125 (256)
                      .-+++|++|.|--.
T Consensus        70 ~~g~iDiLVnnAG~   83 (237)
T d1uzma1          70 HQGPVEVLVSNAGL   83 (237)
T ss_dssp             HHSSCSEEEEECSC
T ss_pred             hcCCceEEEeeecc
Confidence            12679999987644


No 359
>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}
Probab=21.00  E-value=78  Score=19.69  Aligned_cols=35  Identities=20%  Similarity=0.104  Sum_probs=19.1

Q ss_pred             HHHHHcCCcceEEEcchhhchhhhcCCCccEEEECCC
Q 025211           88 KTLEAHNVHADLINTDIASGLEKRLAGLVDVMVVNPP  124 (256)
Q Consensus        88 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~Ii~npP  124 (256)
                      +.+..++++..+......+.....  ..+|+|+..|-
T Consensus        23 ~~a~~~~~~~~i~A~~~~~~~~~~--~~~DviLl~PQ   57 (103)
T d1iiba_          23 AQAEKYEVPVIIEAFPETLAGEKG--QNADVVLLGPQ   57 (103)
T ss_dssp             HHHHHTTCCEEEEEEEGGGHHHHH--TTCSEEEECGG
T ss_pred             HHHHHcCCCEEEEEechHHHhhhc--cCCCEEEECHH
Confidence            333445666555544444332222  46999999653


No 360
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.89  E-value=40  Score=25.66  Aligned_cols=71  Identities=15%  Similarity=0.179  Sum_probs=40.8

Q ss_pred             ecccccHHHHHHHHHhcccCCCceEEEEeCCHH-HHHHHHHHHHHcCCcceEEEcchhhchh--h-hcCCCccEEEE
Q 025211           49 VGCGSGYVITSLALMLGQEVPGVQYIATDINPY-AVEVTRKTLEAHNVHADLINTDIASGLE--K-RLAGLVDVMVV  121 (256)
Q Consensus        49 lGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~-~i~~a~~~~~~~~~~~~~~~~d~~~~~~--~-~~~~~fD~Ii~  121 (256)
                      |=-|+|.++-.+...|.++  +.+|+++|.... ..+.............+++.+|+.+...  . .....+|+|+-
T Consensus         6 VTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           6 VTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             EETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             EeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            4458899998888887654  468999984211 1111111111122234788899875532  1 12346899975


No 361
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=20.87  E-value=41  Score=25.49  Aligned_cols=37  Identities=16%  Similarity=-0.053  Sum_probs=25.8

Q ss_pred             CCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH
Q 025211           43 PVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY   81 (256)
Q Consensus        43 ~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~   81 (256)
                      -++|+=||+|.+.++  +|..|.++.....|+.+|-++.
T Consensus         4 ~KrVaIIGaG~sGl~--~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGAGPSGLV--TAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECCSHHHHH--HHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECcCHHHHH--HHHHHHHhCCCCCEEEEECCCC
Confidence            378999999988765  3444444344458999998753


No 362
>d1v93a_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Thermus thermophilus [TaxId: 274]}
Probab=20.51  E-value=1.6e+02  Score=21.81  Aligned_cols=50  Identities=8%  Similarity=-0.116  Sum_probs=34.0

Q ss_pred             HHHHHHHHHhcccCC--CceEEEEeCCHHHHHHHHHHHHHcCCcc-eEEEcch
Q 025211           55 YVITSLALMLGQEVP--GVQYIATDINPYAVEVTRKTLEAHNVHA-DLINTDI  104 (256)
Q Consensus        55 ~~~~~l~~~l~~~~~--~~~v~giD~~~~~i~~a~~~~~~~~~~~-~~~~~d~  104 (256)
                      .-++.++..+.+.+-  =.++++.|.+...++..-..+...|+.+ =++.||-
T Consensus        58 ~~tl~~a~~l~~~G~~~i~Hlt~r~~n~~~l~~~l~~~~~~GI~niLal~GD~  110 (292)
T d1v93a_          58 ERSVAWAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDP  110 (292)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             hhHHHHHHHHHhCCCCceeeeeecCchHHHHHHHHHHHHHhCcCeEeeccCCC
Confidence            445666666654322  2568888999888887777777888876 5566664


No 363
>d1ne9a1 d.108.1.4 (A:1-164) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]}
Probab=20.50  E-value=1.2e+02  Score=20.42  Aligned_cols=47  Identities=17%  Similarity=0.320  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHHhhccccCeEEEEEEeCCCCHHHHHHHHHHcCCcEEE
Q 025211          149 RAVIDKILPSADKLLSKRGWLYLVTLTANDPSQICLQMMEKGYAARI  195 (256)
Q Consensus       149 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~  195 (256)
                      ......++..+....+.++.++-+.|.......+...++..||....
T Consensus        84 ~~ll~~~~~~l~~a~k~~a~~lridP~v~~~~~l~~~l~~lGf~~~~  130 (164)
T d1ne9a1          84 VDLLDRLVDEAVKALDGRAYVLRFDPEVAYSDEFNTTLQDHGYVTRN  130 (164)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECCSCBCCHHHHHHHHHTTCEEES
T ss_pred             HHHHHHHHHHHHHHHHCCEEEEEECCCCccCHHHHHHHHHCCCcccc
Confidence            34566778887776677766666666656667889999999987543


No 364
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=20.44  E-value=37  Score=21.78  Aligned_cols=54  Identities=19%  Similarity=0.096  Sum_probs=33.4

Q ss_pred             ccccCCchHHHHHHHHHhhcccccCCCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeCCHH
Q 025211           17 VYEPCDDSFALVDALLADRINLVEHHPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINPY   81 (256)
Q Consensus        17 ~~~p~~~~~~l~~~l~~~~~~~~~~~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~~   81 (256)
                      +++-|+...  ++.+.+.+     .++++|+=+  |.|.+++++|..+.++  +.+|+-+|.++.
T Consensus        11 v~~lrtl~D--a~~l~~~~-----~~~~~vvII--GgG~iG~E~A~~l~~~--g~~Vtli~~~~~   64 (121)
T d1d7ya2          11 VHTLRTLED--ARRIQAGL-----RPQSRLLIV--GGGVIGLELAATARTA--GVHVSLVETQPR   64 (121)
T ss_dssp             EEECCSHHH--HHHHHHHC-----CTTCEEEEE--CCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred             EEEeCCHHH--HHHHHHhh-----hcCCeEEEE--CcchhHHHHHHHhhcc--cceEEEEeeccc
Confidence            454444222  24455554     356788666  5567778888887754  568888886654


No 365
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.44  E-value=79  Score=24.33  Aligned_cols=36  Identities=28%  Similarity=0.394  Sum_probs=26.8

Q ss_pred             EEEEecccccHHHHHHHHHhcccCCCceEEEEeCCH
Q 025211           45 LCMEVGCGSGYVITSLALMLGQEVPGVQYIATDINP   80 (256)
Q Consensus        45 ~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~~~   80 (256)
                      ..+=+++|+|....-++..+.+..++.+++++|...
T Consensus       207 d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep~g  242 (355)
T d1jbqa_         207 DMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEG  242 (355)
T ss_dssp             CEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred             CeeEecccCCchHHHHHHHHhhcCCcceEEeecccC
Confidence            344467788877777777777778889999999743


No 366
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.34  E-value=98  Score=19.40  Aligned_cols=51  Identities=10%  Similarity=0.042  Sum_probs=33.9

Q ss_pred             eEEEEeCCHHHHHHHHHHHHHcCCcceE-EEcchhhchhhhcCCCccEEEEC
Q 025211           72 QYIATDINPYAVEVTRKTLEAHNVHADL-INTDIASGLEKRLAGLVDVMVVN  122 (256)
Q Consensus        72 ~v~giD~~~~~i~~a~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~fD~Ii~n  122 (256)
                      +|..+|-++...+..++.+...+.-..+ ...|..+.+.......+|+|+++
T Consensus         3 rILivDD~~~~~~~l~~~L~~~~~~~~v~~a~~g~~al~~~~~~~~dlillD   54 (123)
T d1dz3a_           3 KVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLD   54 (123)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHCCSEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcCCCEEEEc
Confidence            6888999999989888887654421122 23455555443334679999996


No 367
>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=20.13  E-value=57  Score=22.57  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=25.7

Q ss_pred             CCCEEEEecccccHHHHHHHHHhcccCCCceEEEEeC
Q 025211           42 HPVLCMEVGCGSGYVITSLALMLGQEVPGVQYIATDI   78 (256)
Q Consensus        42 ~~~~VLDlGcG~G~~~~~l~~~l~~~~~~~~v~giD~   78 (256)
                      +..+|-=+| +||..+.++.++|.+ .|...+..+--
T Consensus         4 ~kikVaIlG-ATGyvG~elirLL~~-HP~~ei~~l~S   38 (183)
T d2cvoa1           4 EEVRIAVLG-ASGYTGAEIVRLLAN-HPQFRIKVMTA   38 (183)
T ss_dssp             SCEEEEEES-CSSHHHHHHHHHHTT-CSSEEEEEEEC
T ss_pred             CccEEEEEC-cccHHHHHHHHHHHh-CCCceEEEEec
Confidence            445566565 589999999998876 58878777753


Done!