BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025213
MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK
STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG
GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN
GYAEGNTTDQYFVPVVHLVAGMVVKSAFARCFCLLSQKFSLLRILFLIVLKNCQLSPETA
LVVFVWLNVLCHACSF

High Scoring Gene Products

Symbol, full name Information P value
aph-1
anterior pharynx defective 1
protein from Drosophila melanogaster 4.2e-06
aph1
gamma-secretase subunit Aph-1
gene from Dictyostelium discoideum 6.7e-05
APH1A
Uncharacterized protein
protein from Gallus gallus 0.00055

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025213
        (256 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2061265 - symbol:AT2G31440 species:3702 "Arabi...   647  2.0e-63   1
FB|FBgn0031458 - symbol:aph-1 "anterior pharynx defective...   124  4.2e-06   1
DICTYBASE|DDB_G0267976 - symbol:aph1 "gamma-secretase sub...   103  6.7e-05   2
UNIPROTKB|E1C2N9 - symbol:APH1A "Uncharacterized protein"...   106  0.00055   1


>TAIR|locus:2061265 [details] [associations]
            symbol:AT2G31440 species:3702 "Arabidopsis thaliana"
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
            "protein processing" evidence=IEA] [GO:0043085 "positive regulation
            of catalytic activity" evidence=IEA] InterPro:IPR009294
            Pfam:PF06105 GO:GO:0016021 GO:GO:0043085 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0007219 EMBL:AC007169 GO:GO:0016485
            eggNOG:NOG300477 OMA:FIAFGPP PANTHER:PTHR12889 EMBL:AY064157
            EMBL:AY097412 EMBL:AY088444 IPI:IPI00521984 PIR:G84720
            RefSeq:NP_565724.1 UniGene:At.20784 IntAct:Q8L9G7 PaxDb:Q8L9G7
            PRIDE:Q8L9G7 EnsemblPlants:AT2G31440.1 GeneID:817702
            KEGG:ath:AT2G31440 TAIR:At2g31440 HOGENOM:HOG000006375
            InParanoid:Q8L9G7 PhylomeDB:Q8L9G7 ProtClustDB:CLSN2688601
            Genevestigator:Q8L9G7 GermOnline:AT2G31440 Uniprot:Q8L9G7
        Length = 250

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 131/233 (56%), Positives = 153/233 (65%)

Query:     1 MTVXXXXXXXXXXXXPSLSLFVAVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPLK 60
             MTV            PSLSLFV+VIS+KPF                       R FLPLK
Sbjct:     1 MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60

Query:    61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIXXXX 120
             +  WWP+ALL+I+SV FQEGLR LFWKVYKRLED LD+FADR+ +PRLFLTDK+QI    
Sbjct:    61 ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120

Query:   121 XXXXXXXXXXFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
                       FFCLSLLTPAFGPATFYV+RC ++PFFLISAIIALAFVTIHTFSMVIAF 
Sbjct:   121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180

Query:   181 GYAEGNTTDQYFVPVVHLVAGMVVKSAFARCFCLLSQKFSLLRILFLIVLKNC 233
             GYA+GN  DQ  VPV+HL AGM+    FA   C++     LL ++  + L +C
Sbjct:   181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIG--VPLLYLVASLTLVHC 231


>FB|FBgn0031458 [details] [associations]
            symbol:aph-1 "anterior pharynx defective 1" species:7227
            "Drosophila melanogaster" [GO:0005886 "plasma membrane"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=IMP]
            [GO:0004175 "endopeptidase activity" evidence=IMP] [GO:0005887
            "integral to plasma membrane" evidence=NAS] [GO:0016485 "protein
            processing" evidence=IEA] [GO:0043085 "positive regulation of
            catalytic activity" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR009294 Pfam:PF06105
            GO:GO:0043085 GO:GO:0005887 EMBL:AE014134 GO:GO:0007219
            GO:GO:0004175 GO:GO:0016485 eggNOG:NOG300477 KO:K06172 OMA:FIAFGPP
            PANTHER:PTHR12889 GeneTree:ENSGT00390000002049 CTD:33467
            EMBL:AF508786 EMBL:AY051658 RefSeq:NP_608710.1 UniGene:Dm.19771
            ProteinModelPortal:Q9VQG2 MINT:MINT-827568 STRING:Q9VQG2
            PaxDb:Q9VQG2 PRIDE:Q9VQG2 EnsemblMetazoa:FBtr0077716 GeneID:33467
            KEGG:dme:Dmel_CG2855 FlyBase:FBgn0031458 InParanoid:Q9VQG2
            OrthoDB:EOG4DZ0BC PhylomeDB:Q9VQG2 GenomeRNAi:33467 NextBio:783710
            Bgee:Q9VQG2 GermOnline:CG2855 Uniprot:Q9VQG2
        Length = 238

 Score = 124 (48.7 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 47/189 (24%), Positives = 72/189 (38%)

Query:    16 PSLSLFVAVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRAFLPLKSTTWWPFALLIISSV 75
             P  +LFV  I+  P                         A +PLK       A  ++ SV
Sbjct:    16 PPFALFVFTIANDPVRIIILIAAAFFWLLSLLISSLWY-ALIPLKEF----LAFGVVFSV 70

Query:    76 GFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIXXXXXXXXXXXXXXFFCL- 134
              FQE  R + +++ +  E  L A A+        +TD   I               F L 
Sbjct:    71 CFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYVSGLGFGIISGMFALV 125

Query:   135 SLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVP 194
             ++L    GP T  +    ++ FF+ SA  AL+ + +HTF  VI FN +   N     +V 
Sbjct:   126 NVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFFNAFDTNNYIHIGYVV 184

Query:   195 VVHLVAGMV 203
               HL   ++
Sbjct:   185 FSHLFVSLI 193


>DICTYBASE|DDB_G0267976 [details] [associations]
            symbol:aph1 "gamma-secretase subunit Aph-1"
            species:44689 "Dictyostelium discoideum" [GO:0043085 "positive
            regulation of catalytic activity" evidence=IEA] [GO:0016485
            "protein processing" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA]
            InterPro:IPR009294 Pfam:PF06105 dictyBase:DDB_G0267976
            GO:GO:0016021 GO:GO:0043085 GenomeReviews:CM000150_GR GO:GO:0007219
            EMBL:AAFI02000003 GO:GO:0016485 eggNOG:NOG300477 PANTHER:PTHR12889
            RefSeq:XP_647460.1 EnsemblProtists:DDB0266683 GeneID:8616267
            KEGG:ddi:DDB_G0267976 OMA:SILWEST Uniprot:Q55FS3
        Length = 328

 Score = 103 (41.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query:   135 SLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVP 194
             S+L  + GP T +   CP +  F++S+II L    +H    V+AF GY         FV 
Sbjct:   216 SILWESTGPGTLFSPACPSVNLFMLSSIITLFMTLLHVVYNVLAFQGYRSKKYHLVAFVI 275

Query:   195 VVHLV 199
             + H V
Sbjct:   276 ITHFV 280

 Score = 51 (23.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query:    57 LPLKSTTWWPFALLIISSVGFQEGLRVLFWKVY 89
             +P     WW    +I  SV FQE  R +F+++Y
Sbjct:    56 IPPMREHWW---FIISFSVLFQEIFRYIFFRLY 85


>UNIPROTKB|E1C2N9 [details] [associations]
            symbol:APH1A "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016485 "protein processing" evidence=IEA] [GO:0043085
            "positive regulation of catalytic activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0030133
            "transport vesicle" evidence=IEA] InterPro:IPR009294 Pfam:PF06105
            GO:GO:0005783 GO:GO:0005794 GO:GO:0043085 GO:GO:0005887
            GO:GO:0042987 GO:GO:0004175 GO:GO:0006509 GO:GO:0007220
            GO:GO:0031293 GO:GO:0016485 OMA:FIAFGPP PANTHER:PTHR12889
            GeneTree:ENSGT00390000002049 EMBL:AADN02060550 EMBL:AADN02060551
            IPI:IPI00599869 Ensembl:ENSGALT00000004064 Uniprot:E1C2N9
        Length = 211

 Score = 106 (42.4 bits), Expect = 0.00055, P = 0.00055
 Identities = 34/132 (25%), Positives = 60/132 (45%)

Query:    71 IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIXXXXXXXXXXXXXX 130
             ++ SV  QE  R L++K+ ++  + L A ++    P        Q+              
Sbjct:    76 VMFSVLLQEAFRFLYYKLLRKAIEGLVALSEDGCSP----ISIQQMAYVAGVGFGLMSGA 131

Query:   131 FFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQ 190
             F  ++LL  A GP T  +    Q+ +FL SA + +  + +HTF  ++ F+G       + 
Sbjct:   132 FSMINLLADALGPGTVGIHGDSQL-YFLTSAFMTMVLIFLHTFWGILFFHGCENRRWWEI 190

Query:   191 YFVPVVHL-VAG 201
               V V+HL V+G
Sbjct:   191 VAVVVMHLAVSG 202


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.334   0.144   0.461    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      256       207   0.00099  111 3  11 21  0.46    31
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  170 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.26u 0.23s 16.49t   Elapsed:  00:00:00
  Total cpu time:  16.26u 0.23s 16.49t   Elapsed:  00:00:00
  Start:  Thu May  9 21:35:36 2013   End:  Thu May  9 21:35:36 2013

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