Query 025215
Match_columns 256
No_of_seqs 162 out of 831
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:41:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025215.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025215hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 100.0 5.6E-40 1.2E-44 292.0 23.2 202 1-204 123-326 (345)
2 PF04142 Nuc_sug_transp: Nucle 100.0 2.6E-36 5.7E-41 262.9 18.2 187 1-191 48-244 (244)
3 TIGR00803 nst UDP-galactose tr 99.9 5E-23 1.1E-27 176.9 16.1 190 3-198 31-222 (222)
4 PF06027 DUF914: Eukaryotic pr 99.8 7.9E-20 1.7E-24 165.3 19.0 197 1-205 110-310 (334)
5 PF08449 UAA: UAA transporter 99.8 2.8E-17 6E-22 147.6 19.2 200 2-204 96-301 (303)
6 PRK11453 O-acetylserine/cystei 99.7 3.4E-16 7.4E-21 140.2 22.3 192 2-202 92-289 (299)
7 PLN00411 nodulin MtN21 family 99.7 1.6E-15 3.5E-20 139.2 21.8 194 2-201 110-329 (358)
8 PTZ00343 triose or hexose phos 99.7 1.4E-15 3.1E-20 139.3 20.5 186 4-201 148-349 (350)
9 TIGR00817 tpt Tpt phosphate/ph 99.7 4.4E-16 9.5E-21 139.5 14.9 187 2-201 97-294 (302)
10 KOG3912 Predicted integral mem 99.7 1.3E-15 2.9E-20 132.0 15.2 200 1-201 117-335 (372)
11 TIGR00950 2A78 Carboxylate/Ami 99.7 9.6E-15 2.1E-19 127.4 19.4 176 2-195 79-259 (260)
12 PRK11689 aromatic amino acid e 99.6 3.5E-14 7.6E-19 127.0 19.0 184 4-201 99-288 (295)
13 PRK11272 putative DMT superfam 99.6 9.6E-14 2.1E-18 124.0 19.1 179 3-201 103-286 (292)
14 TIGR03340 phn_DUF6 phosphonate 99.5 1.5E-13 3.2E-18 122.0 14.7 179 3-197 96-280 (281)
15 KOG1583 UDP-N-acetylglucosamin 99.5 1.1E-13 2.4E-18 119.9 13.0 199 5-208 100-322 (330)
16 PRK15430 putative chlorampheni 99.5 2.8E-12 6.2E-17 114.7 17.8 178 2-201 105-286 (296)
17 KOG1580 UDP-galactose transpor 99.4 1.9E-12 4.1E-17 110.1 11.4 190 5-203 120-316 (337)
18 PRK10532 threonine and homoser 99.4 3.9E-11 8.4E-16 107.3 19.6 172 5-201 106-282 (293)
19 COG0697 RhaT Permeases of the 99.4 1E-10 2.2E-15 102.4 20.0 180 3-201 103-288 (292)
20 KOG1581 UDP-galactose transpor 99.3 1.3E-10 2.8E-15 102.2 14.8 191 5-200 118-313 (327)
21 KOG1441 Glucose-6-phosphate/ph 99.2 3.3E-12 7.1E-17 114.7 1.6 188 5-204 118-311 (316)
22 PF03151 TPT: Triose-phosphate 99.1 2.8E-09 6E-14 85.7 15.1 138 60-200 1-153 (153)
23 KOG1582 UDP-galactose transpor 99.1 5.1E-09 1.1E-13 91.0 14.7 187 5-201 141-333 (367)
24 COG2962 RarD Predicted permeas 99.0 4.2E-08 9.2E-13 86.2 17.2 175 5-202 107-285 (293)
25 KOG2766 Predicted membrane pro 99.0 1.2E-10 2.7E-15 100.2 0.3 184 7-209 115-305 (336)
26 KOG2765 Predicted membrane pro 98.9 5.7E-08 1.2E-12 87.9 16.4 193 2-202 191-392 (416)
27 KOG1443 Predicted integral mem 98.9 7.2E-08 1.6E-12 85.2 15.4 195 2-209 116-324 (349)
28 TIGR00688 rarD rarD protein. T 98.8 2.3E-07 4.9E-12 81.1 16.4 150 2-175 102-255 (256)
29 TIGR00776 RhaT RhaT L-rhamnose 98.8 2.9E-07 6.3E-12 82.4 15.9 179 5-199 95-287 (290)
30 KOG1442 GDP-fucose transporter 98.7 6.7E-09 1.5E-13 90.4 2.4 189 4-203 136-330 (347)
31 KOG1444 Nucleotide-sugar trans 98.6 7.2E-07 1.6E-11 79.4 12.7 188 2-205 109-305 (314)
32 KOG4510 Permease of the drug/m 98.6 7.4E-08 1.6E-12 83.8 5.6 185 5-198 132-323 (346)
33 PF00892 EamA: EamA-like trans 98.4 4.4E-06 9.4E-11 63.9 10.9 123 69-199 1-125 (126)
34 PRK02971 4-amino-4-deoxy-L-ara 98.2 0.00011 2.4E-09 58.0 15.4 122 59-203 2-125 (129)
35 COG5070 VRG4 Nucleotide-sugar 98.1 3.7E-05 7.9E-10 65.6 9.8 192 3-201 101-297 (309)
36 PF06800 Sugar_transport: Suga 98.0 0.00049 1.1E-08 60.8 16.5 180 4-197 80-268 (269)
37 COG2510 Predicted membrane pro 97.9 8.9E-05 1.9E-09 57.9 9.4 127 61-198 5-137 (140)
38 KOG4314 Predicted carbohydrate 97.9 0.00013 2.9E-09 61.2 11.0 183 6-202 89-278 (290)
39 TIGR03340 phn_DUF6 phosphonate 97.9 0.00057 1.2E-08 60.6 15.0 130 61-201 3-136 (281)
40 PF13536 EmrE: Multidrug resis 97.7 5.2E-05 1.1E-09 58.2 4.6 45 2-46 66-110 (113)
41 PRK15430 putative chlorampheni 97.6 0.0031 6.7E-08 56.4 15.7 134 59-200 8-145 (296)
42 TIGR00688 rarD rarD protein. T 97.6 0.0043 9.3E-08 54.1 15.7 132 60-199 3-141 (256)
43 PF05653 Mg_trans_NIPA: Magnes 97.4 0.00048 1E-08 62.0 6.8 40 4-43 84-123 (300)
44 COG5006 rhtA Threonine/homoser 97.4 0.029 6.3E-07 49.0 17.2 164 15-199 112-281 (292)
45 PF08449 UAA: UAA transporter 97.3 0.013 2.9E-07 52.5 15.2 122 74-202 15-138 (303)
46 PF13536 EmrE: Multidrug resis 97.2 0.0055 1.2E-07 46.8 10.3 65 136-201 43-107 (113)
47 PRK10452 multidrug efflux syst 97.2 0.0056 1.2E-07 47.7 10.1 66 136-201 38-104 (120)
48 PRK09541 emrE multidrug efflux 97.1 0.0077 1.7E-07 46.2 10.4 41 161-201 64-104 (110)
49 PRK15051 4-amino-4-deoxy-L-ara 97.0 0.0067 1.5E-07 46.5 9.2 57 142-199 51-108 (111)
50 TIGR00950 2A78 Carboxylate/Ami 97.0 0.017 3.7E-07 50.0 12.8 120 71-201 1-120 (260)
51 PRK15051 4-amino-4-deoxy-L-ara 97.0 0.0012 2.6E-08 50.7 4.8 39 4-42 71-109 (111)
52 PRK11689 aromatic amino acid e 97.0 0.036 7.9E-07 49.4 14.8 129 60-201 5-138 (295)
53 PRK11272 putative DMT superfam 96.9 0.041 8.9E-07 49.0 14.9 130 61-201 10-142 (292)
54 PLN00411 nodulin MtN21 family 96.9 0.066 1.4E-06 49.4 15.9 132 60-199 14-155 (358)
55 PRK11453 O-acetylserine/cystei 96.8 0.076 1.7E-06 47.4 15.5 126 62-201 7-133 (299)
56 PF00892 EamA: EamA-like trans 96.7 0.0026 5.6E-08 48.2 4.6 40 2-41 86-125 (126)
57 PF05653 Mg_trans_NIPA: Magnes 96.7 0.03 6.5E-07 50.5 11.9 118 57-200 5-122 (300)
58 TIGR00817 tpt Tpt phosphate/ph 96.6 0.12 2.5E-06 46.2 15.2 61 139-199 76-136 (302)
59 PF06027 DUF914: Eukaryotic pr 96.6 0.16 3.4E-06 46.5 15.9 63 140-202 91-153 (334)
60 COG2076 EmrE Membrane transpor 96.5 0.038 8.2E-07 42.0 9.3 62 140-201 42-104 (106)
61 COG0697 RhaT Permeases of the 96.3 0.41 8.8E-06 41.4 16.8 138 59-202 7-145 (292)
62 TIGR00776 RhaT RhaT L-rhamnose 96.3 0.18 4E-06 45.0 14.5 127 60-201 2-137 (290)
63 PRK10650 multidrug efflux syst 96.2 0.07 1.5E-06 40.8 9.6 57 142-198 49-106 (109)
64 PTZ00343 triose or hexose phos 96.2 0.27 5.8E-06 45.2 15.2 54 147-200 133-186 (350)
65 PRK11431 multidrug efflux syst 96.1 0.078 1.7E-06 40.3 9.6 42 159-200 61-102 (105)
66 PF04657 DUF606: Protein of un 96.1 0.55 1.2E-05 37.4 15.3 127 61-197 3-138 (138)
67 PF07857 DUF1632: CEO family ( 95.9 0.16 3.4E-06 44.7 11.7 63 139-201 66-135 (254)
68 PRK13499 rhamnose-proton sympo 95.9 0.22 4.7E-06 45.8 13.0 136 58-201 6-154 (345)
69 PRK11431 multidrug efflux syst 95.9 0.021 4.5E-07 43.5 5.3 39 5-43 65-103 (105)
70 COG2076 EmrE Membrane transpor 95.8 0.021 4.6E-07 43.4 5.1 39 5-43 66-104 (106)
71 PRK09541 emrE multidrug efflux 95.7 0.026 5.7E-07 43.2 5.5 40 5-44 66-105 (110)
72 PRK10452 multidrug efflux syst 95.7 0.026 5.6E-07 44.0 5.5 40 5-44 66-105 (120)
73 PF10639 UPF0546: Uncharacteri 95.7 0.026 5.6E-07 43.5 5.2 67 131-197 44-111 (113)
74 PF00893 Multi_Drug_Res: Small 95.5 0.081 1.7E-06 39.1 7.2 50 142-191 43-93 (93)
75 PRK10650 multidrug efflux syst 95.4 0.036 7.9E-07 42.4 5.1 37 5-41 71-107 (109)
76 PRK02971 4-amino-4-deoxy-L-ara 95.2 0.049 1.1E-06 42.9 5.7 38 8-45 86-125 (129)
77 PF04142 Nuc_sug_transp: Nucle 94.8 0.29 6.2E-06 42.8 9.9 66 137-202 26-91 (244)
78 KOG2922 Uncharacterized conser 94.0 0.2 4.3E-06 45.3 7.1 45 2-46 96-140 (335)
79 COG3238 Uncharacterized protei 93.6 3.3 7.1E-05 33.5 15.1 134 59-200 5-146 (150)
80 KOG4510 Permease of the drug/m 92.5 0.13 2.8E-06 45.4 3.4 44 159-202 128-171 (346)
81 COG2962 RarD Predicted permeas 92.0 4.8 0.0001 36.0 12.6 131 60-199 8-143 (293)
82 KOG2922 Uncharacterized conser 90.6 0.16 3.5E-06 45.8 2.1 74 128-201 64-137 (335)
83 PF04342 DUF486: Protein of un 90.2 0.65 1.4E-05 35.1 4.7 47 152-198 60-106 (108)
84 TIGR00803 nst UDP-galactose tr 90.1 4.2 9E-05 34.5 10.4 43 2-44 10-52 (222)
85 PF06379 RhaT: L-rhamnose-prot 89.9 8.6 0.00019 35.3 12.5 135 58-201 6-154 (344)
86 KOG1581 UDP-galactose transpor 88.8 10 0.00022 34.3 11.8 71 132-202 87-157 (327)
87 PRK13499 rhamnose-proton sympo 88.4 20 0.00044 33.0 21.2 71 5-75 109-190 (345)
88 PF00893 Multi_Drug_Res: Small 88.3 0.61 1.3E-05 34.4 3.4 29 5-33 65-93 (93)
89 COG3169 Uncharacterized protei 87.4 3 6.6E-05 31.2 6.5 49 151-199 66-114 (116)
90 PF10639 UPF0546: Uncharacteri 87.1 0.68 1.5E-05 35.6 3.1 37 4-40 76-112 (113)
91 KOG2765 Predicted membrane pro 87.1 1.6 3.5E-05 40.4 6.0 53 157-209 188-240 (416)
92 PF06800 Sugar_transport: Suga 84.0 11 0.00024 33.4 9.7 62 141-202 58-124 (269)
93 KOG1580 UDP-galactose transpor 81.8 2.6 5.7E-05 36.8 4.7 39 4-42 275-313 (337)
94 KOG4831 Unnamed protein [Funct 78.4 2.3 5E-05 32.3 2.9 65 134-198 58-123 (125)
95 COG4975 GlcU Putative glucose 73.4 0.18 4E-06 44.0 -4.7 176 5-198 95-283 (288)
96 PRK10532 threonine and homoser 72.4 68 0.0015 28.3 15.1 125 58-200 11-137 (293)
97 COG3169 Uncharacterized protei 71.1 12 0.00025 28.1 4.9 32 9-40 82-113 (116)
98 PF04342 DUF486: Protein of un 70.2 6.7 0.00015 29.7 3.6 31 9-39 75-105 (108)
99 KOG3912 Predicted integral mem 69.4 88 0.0019 28.3 13.9 64 138-201 96-159 (372)
100 PRK11715 inner membrane protei 62.9 87 0.0019 29.9 10.3 56 19-85 326-383 (436)
101 PF06123 CreD: Inner membrane 61.5 88 0.0019 29.8 10.1 58 17-85 318-377 (430)
102 KOG1444 Nucleotide-sugar trans 61.3 1.3E+02 0.0028 27.4 12.4 136 60-201 13-150 (314)
103 KOG2234 Predicted UDP-galactos 55.8 47 0.001 30.6 7.0 59 141-199 105-163 (345)
104 PF09656 PGPGW: Putative trans 50.2 72 0.0016 21.1 5.4 45 26-84 5-49 (53)
105 PRK02237 hypothetical protein; 47.5 43 0.00093 25.5 4.5 38 7-44 70-107 (109)
106 COG4975 GlcU Putative glucose 44.3 17 0.00036 32.1 2.1 47 155-201 87-137 (288)
107 PF05454 DAG1: Dystroglycan (D 41.5 8.7 0.00019 34.5 0.0 9 247-255 215-223 (290)
108 PF02694 UPF0060: Uncharacteri 40.4 56 0.0012 24.8 4.2 39 6-44 67-105 (107)
109 PF05297 Herpes_LMP1: Herpesvi 32.8 15 0.00031 33.0 0.0 27 14-40 68-95 (381)
110 COG2855 Predicted membrane pro 30.8 4.3E+02 0.0093 24.3 9.8 71 14-85 75-149 (334)
111 PF05961 Chordopox_A13L: Chord 30.1 41 0.00089 23.3 1.8 21 182-202 4-24 (68)
112 PF11022 DUF2611: Protein of u 30.0 23 0.00051 24.9 0.7 25 174-198 6-31 (71)
113 PF15471 TMEM171: Transmembran 29.8 68 0.0015 28.6 3.6 28 180-207 159-186 (319)
114 KOG1479 Nucleoside transporter 29.2 5E+02 0.011 24.6 12.2 57 143-199 141-201 (406)
115 PF03348 Serinc: Serine incorp 28.7 5.1E+02 0.011 24.6 11.0 21 180-201 283-303 (429)
116 KOG1583 UDP-N-acetylglucosamin 27.2 70 0.0015 28.8 3.3 40 163-202 100-139 (330)
117 PRK14778 lipoprotein signal pe 26.6 3.8E+02 0.0083 22.4 11.1 19 182-200 121-139 (186)
118 PRK14796 lipoprotein signal pe 25.8 3.3E+02 0.0072 22.0 6.9 56 21-76 88-152 (161)
119 PRK02935 hypothetical protein; 25.2 2.7E+02 0.0059 21.1 5.6 22 180-201 40-61 (110)
120 COG4720 Predicted membrane pro 24.9 2.3E+02 0.0049 23.6 5.6 30 123-152 69-98 (177)
121 KOG1443 Predicted integral mem 24.2 1.3E+02 0.0028 27.5 4.4 38 4-41 277-314 (349)
122 PHA03049 IMV membrane protein; 24.1 93 0.002 21.5 2.7 20 182-201 4-23 (68)
123 PRK00376 lspA lipoprotein sign 23.2 3.4E+02 0.0074 21.9 6.5 57 20-76 90-155 (160)
124 PRK12324 phosphoribose diphosp 23.1 5.5E+02 0.012 23.0 17.2 47 141-188 127-173 (295)
125 COG4711 Predicted membrane pro 23.1 4.5E+02 0.0098 22.5 7.2 24 17-40 116-139 (217)
126 PF03845 Spore_permease: Spore 22.8 4E+02 0.0086 23.6 7.5 64 21-91 1-65 (320)
127 PF04304 DUF454: Protein of un 22.7 2.5E+02 0.0055 19.0 5.5 35 164-198 35-69 (71)
128 KOG0569 Permease of the major 22.5 5E+02 0.011 25.2 8.4 18 175-192 176-193 (485)
129 PF07168 Ureide_permease: Urei 22.1 13 0.00029 33.6 -2.2 15 183-197 129-143 (336)
130 TIGR00077 lspA lipoprotein sig 22.1 4.3E+02 0.0094 21.4 7.1 57 20-76 92-157 (166)
131 PF02694 UPF0060: Uncharacteri 21.9 3.6E+02 0.0079 20.5 9.8 63 136-201 40-104 (107)
132 PRK03427 cell division protein 21.4 2.1E+02 0.0045 26.3 5.3 28 180-207 5-33 (333)
133 COG1742 Uncharacterized conser 21.0 1.3E+02 0.0028 22.8 3.2 38 7-44 69-106 (109)
134 PF11023 DUF2614: Protein of u 21.0 3.2E+02 0.0069 21.0 5.4 23 20-42 6-28 (114)
135 PRK13108 prolipoprotein diacyl 20.4 7.8E+02 0.017 23.7 9.6 21 180-200 254-274 (460)
136 PF06502 Equine_IAV_S2: Equine 20.3 53 0.0012 22.4 0.9 15 241-255 12-28 (67)
137 KOG1631 Translocon-associated 20.2 87 0.0019 27.2 2.4 42 176-217 181-222 (261)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-40 Score=291.97 Aligned_cols=202 Identities=32% Similarity=0.487 Sum_probs=176.0
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCC-C-CCCCChhhhHHHHHHHHHHHHHHHHHHH
Q 025215 1 MLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGT-S-ALGLPVATGAYLYTLIFVTVPSLASVFN 78 (256)
Q Consensus 1 ~l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~-~-~~~~~~~~~G~l~~l~a~~~sala~V~~ 78 (256)
+++|+||++||++++++|+||++++||.+++++++|+.++|.+..+..+ . .........|...++.+|++|++++||+
T Consensus 123 Vt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYf 202 (345)
T KOG2234|consen 123 VTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYF 202 (345)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999944322211 1 1111234579999999999999999999
Q ss_pred HHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 025215 79 EYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKK 158 (256)
Q Consensus 79 e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~ky~~~i~k~ 158 (256)
||++|+. +.+.|+||+++|++|.++++..++....-.+. ..++|+||++.+|.+++.+++||+++++++||+|||+|.
T Consensus 203 EkiLK~s-~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~ 280 (345)
T KOG2234|consen 203 EKILKGS-NVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKG 280 (345)
T ss_pred HHHHhcC-CchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHH
Confidence 9999996 68999999999999999999777643222222 468999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCC
Q 025215 159 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSK 204 (256)
Q Consensus 159 ~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~ 204 (256)
++++++++++.++|+++||.++|..+++|..+|+.++++|+..+++
T Consensus 281 f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 281 FSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 9999999999999999999999999999999999999999966544
No 2
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=100.00 E-value=2.6e-36 Score=262.90 Aligned_cols=187 Identities=32% Similarity=0.510 Sum_probs=164.8
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCC--CCC------CChhhhHHHHHHHHHHHHH
Q 025215 1 MLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS--ALG------LPVATGAYLYTLIFVTVPS 72 (256)
Q Consensus 1 ~l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~--~~~------~~~~~~G~l~~l~a~~~sa 72 (256)
|++|+|+++||++++++||||++++||.|++++++|+++++.++....+. ..+ ......|++++++++++||
T Consensus 48 vl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~ 127 (244)
T PF04142_consen 48 VLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSG 127 (244)
T ss_pred HHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999887554211 111 1234579999999999999
Q ss_pred HHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcchhhcCCchhHHHHHHHHhhhhHHHHHHHH
Q 025215 73 LASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP--SSFDILQGHSKATMLLICNNAAQGILSSFFFK 150 (256)
Q Consensus 73 la~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~--~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~k 150 (256)
+++||+||++|++ +.|+|.||+|+|++|++++++.... .++. ...++|+||++++|..++.++++|+++++++|
T Consensus 128 ~agVy~E~~lK~~-~~s~~~~N~qL~~~gi~~~~~~~~~---~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~K 203 (244)
T PF04142_consen 128 FAGVYFEKLLKRS-NVSLWIQNMQLYLFGILFNLLALLL---SDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLK 203 (244)
T ss_pred HHHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHhc---ccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHH
Confidence 9999999999996 5899999999999999998876542 2332 34679999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Q 025215 151 YADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV 191 (256)
Q Consensus 151 y~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lV 191 (256)
|+|||+|.++++++++++.++|+.+||.+++..+++|..+|
T Consensus 204 yadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 204 YADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 99999999999999999999999999999999999998765
No 3
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.90 E-value=5e-23 Score=176.86 Aligned_cols=190 Identities=25% Similarity=0.359 Sum_probs=161.7
Q ss_pred cchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 025215 3 SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYAL 82 (256)
Q Consensus 3 ~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~l 82 (256)
.|.|++.++++.+..++++++..||.++..+..|+..++.++..++....| ....|..+++.++++++++++|.|+..
T Consensus 31 ~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g--~~~~g~~~~l~a~~~~~~~~~y~e~~~ 108 (222)
T TIGR00803 31 TQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG--NPVVGLSAVLSALLSSGFAGVYFEKIL 108 (222)
T ss_pred ehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc--cHHHHHHHHHHHHHHHhhhHHHHHHcc
Confidence 399999999999999999999999999999999999888766432111112 344688899999999999999999997
Q ss_pred hccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcchhhcCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 025215 83 KSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP--SSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYS 160 (256)
Q Consensus 83 k~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~--~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~ky~~~i~k~~a 160 (256)
|++ +.+++.+|+++++++.+.+...... .+++ ...++++|++...|..++.++++++++++++||.|+++|+++
T Consensus 109 k~~-~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~ 184 (222)
T TIGR00803 109 KDG-DTMFWSRNLQLPLFGLFSTFSVLLW---SDGTLISNFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFV 184 (222)
T ss_pred cCC-CCchHHHHHHHHHHHHHHHHHHHhh---cccchhhccCcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHH
Confidence 775 5789999999999998865543321 1221 134567889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 161 STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 161 ~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
++.+++++.++|+++||++++..+++|..+|+.|+++|
T Consensus 185 ~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 185 TALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 99999999999999999999999999999999999887
No 4
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.85 E-value=7.9e-20 Score=165.32 Aligned_cols=197 Identities=13% Similarity=0.174 Sum_probs=149.9
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHH
Q 025215 1 MLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEY 80 (256)
Q Consensus 1 ~l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~ 80 (256)
+|.++.+++++++++++||+|+++.||.|+++.++|+.++...|...++...+.+....|++++++++++.|+++|++|+
T Consensus 110 lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~ 189 (334)
T PF06027_consen 110 LLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEK 189 (334)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999988877543322222234457999999999999999999999
Q ss_pred HhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHH----HHHhhhhHHHHHHHHHHHHHH
Q 025215 81 ALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI----CNNAAQGILSSFFFKYADTIL 156 (256)
Q Consensus 81 ~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i----~~~a~~g~~v~~v~ky~~~i~ 156 (256)
..|+. +......+++++|.+++.+.+. ++|... .+.+ .+++..+... +.....-.++..++|+.++..
T Consensus 190 ~v~~~---~~~~~lg~~Glfg~ii~~iq~~---ile~~~-i~~~-~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~ 261 (334)
T PF06027_consen 190 LVKKA---PRVEFLGMLGLFGFIISGIQLA---ILERSG-IESI-HWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATF 261 (334)
T ss_pred hcccC---CHHHHHHHHHHHHHHHHHHHHH---heehhh-hhcc-CCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccce
Confidence 99874 5566677888999988776543 234321 1111 1233222221 122223445567788888887
Q ss_pred HHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCCC
Q 025215 157 KKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 205 (256)
Q Consensus 157 k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~~ 205 (256)
-+.....+.+.+.+.++++||+++++.+++|.++|++|..+|+..+++.
T Consensus 262 ~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 262 FNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred eehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 7777777889999999999999999999999999999999999875443
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.77 E-value=2.8e-17 Score=147.63 Aligned_cols=200 Identities=17% Similarity=0.266 Sum_probs=149.0
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCC-ChhhhHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGL-PVATGAYLYTLIFVTVPSLASVFNEY 80 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~-~~~~~G~l~~l~a~~~sala~V~~e~ 80 (256)
+...|++.+++++++++|||++++||.+++++++|+.+....+..++...... .....|+.+++++.++.|+.++++||
T Consensus 96 ~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~ 175 (303)
T PF08449_consen 96 FKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEK 175 (303)
T ss_pred HhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999887765432211111 11123999999999999999999999
Q ss_pred HhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cchhhcCCchh---HHHHHHHHhhhhHHHHHHHHHHHHH
Q 025215 81 ALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQGHSKA---TMLLICNNAAQGILSSFFFKYADTI 155 (256)
Q Consensus 81 ~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~--~~~~~~g~~~~---~~~~i~~~a~~g~~v~~v~ky~~~i 155 (256)
+++++ +.+.+..-....+++.++.++....- ..++. ...+...++.. .....+.++++...+....|..++.
T Consensus 176 ~~~~~-~~~~~~~mfy~n~~~~~~~~~~~~~l--~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al 252 (303)
T PF08449_consen 176 LFKKY-GKSPWELMFYTNLFSLPFLLILLFLL--PTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSAL 252 (303)
T ss_pred HHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHH--HhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 99886 45555555556677777655444320 02221 11222222222 2222345566777777778899999
Q ss_pred HHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCC
Q 025215 156 LKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSK 204 (256)
Q Consensus 156 ~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~ 204 (256)
+.+..++++.++++++|+++||+++++.+++|..+|+.|..+|+...+|
T Consensus 253 ~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k 301 (303)
T PF08449_consen 253 TTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK 301 (303)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999987433
No 6
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.75 E-value=3.4e-16 Score=140.21 Aligned_cols=192 Identities=17% Similarity=0.119 Sum_probs=133.5
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
+.++.++++.+++++++|||++++||.++++.++|+.++..++.+. .+....|+++.++++++++.++++.||.
T Consensus 92 l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 92 VLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred HHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999999999998877543211 1122359999999999999999999997
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-chhhcCCchhHHHHHHHHhhhhHHHHHHH-----HHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS-FDILQGHSKATMLLICNNAAQGILSSFFF-----KYADTI 155 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~-~~~~~g~~~~~~~~i~~~a~~g~~v~~v~-----ky~~~i 155 (256)
.++.+.......+.+....+.+ +........+++.. ...+..+++..|..+++.++.+..+++.+ |+.++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~ 242 (299)
T PRK11453 166 MSHSTRPAVMSLVVWSALIPII---PFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETW 242 (299)
T ss_pred hcccCccchhHHHHHHHHHHHH---HHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 6553212222222222222222 22222222333211 11223445566777777777666666554 445555
Q ss_pred HHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 156 LKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 156 ~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
..+....+.++++.+++++++||+++..+++|+++++.|+++-..+.
T Consensus 243 ~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 243 RVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 66666778889999999999999999999999999999998876653
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.71 E-value=1.6e-15 Score=139.18 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=128.4
Q ss_pred CcchHHHHHHHHHHHH------hCCCCCHHHHHHHHHHHHHHhHhccCCCCCC----------------CCCCCCChhhh
Q 025215 2 LSNLKVFVIALLLKII------MKRRFSIIQWEALALLLIGISVNQLRSLPEG----------------TSALGLPVATG 59 (256)
Q Consensus 2 l~q~kil~talls~l~------Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~----------------~~~~~~~~~~~ 59 (256)
+.++.+++++++++++ +|||++++||.|+++.++|+.++...+.... ....+......
T Consensus 110 l~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 189 (358)
T PLN00411 110 ISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLI 189 (358)
T ss_pred HHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHH
Confidence 4678899999999999 6999999999999999999988765332110 00001112245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHh
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNA 139 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a 139 (256)
|.+++++++++||++.++.++..++++ +....+.+...++.+ +........++.........++... ..+++.+
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~~~~~--~~~~~t~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~ 263 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIMSEYP--AAFTVSFLYTVCVSI---VTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMA 263 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC--cHhHHHHHHHHHHHH---HHHHHHHHHccCCcccceeccchHH-HHHHHHH
Confidence 999999999999999999999887752 222333333333322 2222222233221111122233322 2344554
Q ss_pred hhh----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 140 AQG----ILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 140 ~~g----~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.. .+..+..|+.++...+....+.++++.+++++++||++++.+++|+++|+.|+++..+.
T Consensus 264 i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 264 IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 432 22223455666666666667888999999999999999999999999999999998764
No 8
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.71 E-value=1.4e-15 Score=139.28 Aligned_cols=186 Identities=13% Similarity=0.234 Sum_probs=132.9
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 83 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk 83 (256)
-+.++++++++++++|||+++++|.++++.++|+.+...++. +.+..|+++.+++++++++++++.||.++
T Consensus 148 a~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~ 218 (350)
T PTZ00343 148 AAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFWCAMLSNLGSSLRSIFAKKTMK 218 (350)
T ss_pred HhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999999875332 12346999999999999999999999987
Q ss_pred ccCCC--ChhHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcchh-------hcCCch-hHHHHHHHHhhhhHHHH----H
Q 025215 84 SQYDT--SIYHQNLFL--YGYGAIFNFLGIVITAMFKGPSSFDI-------LQGHSK-ATMLLICNNAAQGILSS----F 147 (256)
Q Consensus 84 ~~~~~--s~~~~~~~l--~~~g~i~~~~~~~~~~~~~g~~~~~~-------~~g~~~-~~~~~i~~~a~~g~~v~----~ 147 (256)
+++.. +....|.+. ..+|.++.+|..+. .|+...... +..+.+ ..+..++..++...+.. .
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~ 295 (350)
T PTZ00343 219 NKSEIGENLTASNIYMLLTLIASLISLPLVLF---FEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFY 295 (350)
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 64211 122233332 45666666665432 232110111 111111 11112223333333333 3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 148 FFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 148 v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
.+++.++++.+.+..+.+++++++|++++||+++..+++|.++++.|+++|+..
T Consensus 296 ~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 296 CLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 677788999999999999999999999999999999999999999999999864
No 9
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.69 E-value=4.4e-16 Score=139.49 Aligned_cols=187 Identities=11% Similarity=0.179 Sum_probs=130.1
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
+..+.++++++++++++|||+++++|.++++.++|+.+...++. +....|+++.++++++++++.++.||.
T Consensus 97 i~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~~k~~ 167 (302)
T TIGR00817 97 IKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL---------SFNWAGFLSAMISNITFVSRNIFSKKA 167 (302)
T ss_pred HHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc---------cccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999987642221 123469999999999999999999998
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cchhhcC---Cch-hHHHHHHHHhh-----hhHHHHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQG---HSK-ATMLLICNNAA-----QGILSSFFFK 150 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~--~~~~~~g---~~~-~~~~~i~~~a~-----~g~~v~~v~k 150 (256)
.+++ +.+......+....+.++.+|... ..++.. ..+..+. ... ..|..++..++ .+.......|
T Consensus 168 ~~~~-~~~~~~~~~~~~~~~~~~l~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 243 (302)
T TIGR00817 168 MTIK-SLDKTNLYAYISIMSLFLLSPPAF---ITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLG 243 (302)
T ss_pred hccC-CCCcccHHHHHHHHHHHHHHHHHH---HHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7732 123344444445556555444432 233321 0011110 111 12221222221 1122224577
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 151 YADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 151 y~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.++.+.+....+.++++++++++++||+++..+++|.++++.|+++|++.
T Consensus 244 ~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 244 RVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV 294 (302)
T ss_pred cCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999999999875
No 10
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.68 E-value=1.3e-15 Score=131.99 Aligned_cols=200 Identities=16% Similarity=0.170 Sum_probs=146.8
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCC-CCChhhhHHHHHHHHHHHHHHHHHHHH
Q 025215 1 MLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL-GLPVATGAYLYTLIFVTVPSLASVFNE 79 (256)
Q Consensus 1 ~l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~-~~~~~~~G~l~~l~a~~~sala~V~~e 79 (256)
|+....++|+++|+..+|+|+++.+||+++....+|++++...+....+... +.+....|+++++.+.++-|++-|++|
T Consensus 117 MlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Ee 196 (372)
T KOG3912|consen 117 MLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEE 196 (372)
T ss_pred HhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999876532211111 122344699999999999999999999
Q ss_pred HHhhccCCCChhHHHHHHHHHH-HHHHHHHHHHHHHhcCCC----cchhhcCC----------chhHH-H--HHHHHhhh
Q 025215 80 YALKSQYDTSIYHQNLFLYGYG-AIFNFLGIVITAMFKGPS----SFDILQGH----------SKATM-L--LICNNAAQ 141 (256)
Q Consensus 80 ~~lk~~~~~s~~~~~~~l~~~g-~i~~~~~~~~~~~~~g~~----~~~~~~g~----------~~~~~-~--~i~~~a~~ 141 (256)
|.+|+. ++++..---+-++|| .++++.+.....+..|.. +.+.++.| +.... + .+...|+.
T Consensus 197 k~l~~~-nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAff 275 (372)
T KOG3912|consen 197 KQLKKS-NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFF 275 (372)
T ss_pred hhhhhc-cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeee
Confidence 999986 566665555668888 455554444333334421 11222211 11111 1 11223333
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 142 GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 142 g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+..--.+.|+.++.++.....+++.+.++++..+++|.+...|+.|+.+.+.|+.+|+..
T Consensus 276 NfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~i 335 (372)
T KOG3912|consen 276 NFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQI 335 (372)
T ss_pred eehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444446789999999999999999999999999999999999999999999999999874
No 11
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.66 E-value=9.6e-15 Score=127.38 Aligned_cols=176 Identities=16% Similarity=0.125 Sum_probs=126.2
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
+.++.++++++++.+++|||++++||.++++.++|+.++..++.. .....|+.+.++++++++.++++.||.
T Consensus 79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~~~~~G~~~~l~a~~~~a~~~~~~k~~ 150 (260)
T TIGR00950 79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------SINPAGLLLGLGSGISFALGTVLYKRL 150 (260)
T ss_pred HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------cccHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 356889999999999999999999999999999999988654311 122359999999999999999999998
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHH-----HHHHhhhhHHHHHHHHHHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLL-----ICNNAAQGILSSFFFKYADTIL 156 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~-----i~~~a~~g~~v~~v~ky~~~i~ 156 (256)
.++. +.+....+.+.+.++.++..+... ..++.. .. +...|.. ++...++..+.....|+.+...
T Consensus 151 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 220 (260)
T TIGR00950 151 VKKE-GPELLQFTGWVLLLGALLLLPFAW----FLGPNP--QA---LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSA 220 (260)
T ss_pred hhcC-CchHHHHHHHHHHHHHHHHHHHHH----hcCCCC--Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 7653 222222332334455444333322 222211 11 2223322 3334445555556678888877
Q ss_pred HHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHH
Q 025215 157 KKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISM 195 (256)
Q Consensus 157 k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv 195 (256)
......+.++++.+++++++||+++..+++|..+++.|+
T Consensus 221 ~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 221 ASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 888888999999999999999999999999999999986
No 12
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.62 E-value=3.5e-14 Score=127.00 Aligned_cols=184 Identities=13% Similarity=0.060 Sum_probs=124.1
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCC-CC-CCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEG-TS-ALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~-~~-~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
.+.++++++++++++|||++++||.++++.++|+.++..++.+.+ .+ ..+......|+++.+++++++|+++++.||.
T Consensus 99 ~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~ 178 (295)
T PRK11689 99 YLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKY 178 (295)
T ss_pred HHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhc
Confidence 466999999999999999999999999999999988775542110 00 0011112359999999999999999999998
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhh----hhHHHHHHHHHHHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAA----QGILSSFFFKYADTILK 157 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~----~g~~v~~v~ky~~~i~k 157 (256)
.++. .+. . ... ..+.++..+. ...++.. ....++..|..+++.++ +..+....+|+.++...
T Consensus 179 ~~~~--~~~-~--~~~-~~~~~~l~~~----~~~~~~~----~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~ 244 (295)
T PRK11689 179 ARGK--NGI-T--LFF-ILTALALWIK----YFLSPQP----AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLL 244 (295)
T ss_pred cCCC--Cch-h--HHH-HHHHHHHHHH----HHHhcCc----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 5553 122 1 111 1222211111 1122221 11233344444444443 23334455777777777
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+....+.|+++.+++++++||+++..+++|.++++.|+++....
T Consensus 245 s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 245 ATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 77788899999999999999999999999999999999776553
No 13
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.60 E-value=9.6e-14 Score=123.96 Aligned_cols=179 Identities=12% Similarity=0.065 Sum_probs=123.5
Q ss_pred cchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 025215 3 SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYAL 82 (256)
Q Consensus 3 ~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~l 82 (256)
..+.++++++++++ +|||++++||.|+++.++|+.++..++.. +....|+++.+++++++|+++++.||..
T Consensus 103 ~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~~~~G~l~~l~a~~~~a~~~~~~~~~~ 173 (292)
T PRK11272 103 VATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SGNPWGAILILIASASWAFGSVWSSRLP 173 (292)
T ss_pred HHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------ccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45789999999985 79999999999999999999888644211 1223599999999999999999998864
Q ss_pred hccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhH-----HHHHHHHHHHHHHH
Q 025215 83 KSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI-----LSSFFFKYADTILK 157 (256)
Q Consensus 83 k~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~-----~v~~v~ky~~~i~k 157 (256)
++ .+......+ ...+.+...+.. ...++. .....+...|..+++.++.+. +.....|+.+....
T Consensus 174 ~~---~~~~~~~~~-~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~ 242 (292)
T PRK11272 174 LP---VGMMAGAAE-MLAAGVVLLIAS---LLSGER----LTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALA 242 (292)
T ss_pred CC---cchHHHHHH-HHHHHHHHHHHH---HHcCCc----ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 33 133322222 333333222221 111211 001113344555555555444 44444566666666
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+......++++.+++++++||+++..+++|+++++.|+++.+..
T Consensus 243 s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 243 TSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 66677889999999999999999999999999999999887664
No 14
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.54 E-value=1.5e-13 Score=122.03 Aligned_cols=179 Identities=12% Similarity=0.154 Sum_probs=110.5
Q ss_pred cchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 025215 3 SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYAL 82 (256)
Q Consensus 3 ~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~l 82 (256)
..+.++++++++++++|||++++||.|+++.++|+.++..++... ....|+.+.++++++++++.++.|+..
T Consensus 96 ~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~--------~~~~g~~~~l~aal~~a~~~i~~k~~~ 167 (281)
T TIGR03340 96 ARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ--------HRRKAYAWALAAALGTAIYSLSDKAAA 167 (281)
T ss_pred HhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc--------cchhHHHHHHHHHHHHHHhhhhccccc
Confidence 456799999999999999999999999999999998876543211 112377788999999999999887764
Q ss_pred hccCCCChhHHHHHHHHHHHHHH-HHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHh-----hhhHHHHHHHHHHHHHH
Q 025215 83 KSQYDTSIYHQNLFLYGYGAIFN-FLGIVITAMFKGPSSFDILQGHSKATMLLICNNA-----AQGILSSFFFKYADTIL 156 (256)
Q Consensus 83 k~~~~~s~~~~~~~l~~~g~i~~-~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a-----~~g~~v~~v~ky~~~i~ 156 (256)
++. +......+...++.++. .+........++. ... .....+..+.+.+ ++..+....+|+.+...
T Consensus 168 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~ 239 (281)
T TIGR03340 168 LGV---PAFYSALGYLGIGFLAMGWPFLLLYLKRHGR-SMF----PYARQILPSATLGGLMIGGAYALVLWAMTRLPVAT 239 (281)
T ss_pred cch---hcccccHHHHHHHHHHHHHHHHHHHHHHhcc-chh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence 332 11111111112222221 2222211111211 100 0111122222222 23333333344444333
Q ss_pred HHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHh
Q 025215 157 KKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ 197 (256)
Q Consensus 157 k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~l 197 (256)
......+.++++.+++++++||+++..+++|.++++.|+++
T Consensus 240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 33334567899999999999999999999999999999875
No 15
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.54 E-value=1.1e-13 Score=119.90 Aligned_cols=199 Identities=17% Similarity=0.209 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCC----------CCCCChhhhHHHHHHHHHHHHHHH
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS----------ALGLPVATGAYLYTLIFVTVPSLA 74 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~----------~~~~~~~~~G~l~~l~a~~~sala 74 (256)
-.++.+++++++++|||++.+|+.+++++++|+++..+....+... ......-.+|+.++..+.+.+|..
T Consensus 100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m 179 (330)
T KOG1583|consen 100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM 179 (330)
T ss_pred CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999987655433211 111223347999999999999999
Q ss_pred HHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHH--H-------hcCCCcchhhcCC-chhHHHHHHHH-hhhhH
Q 025215 75 SVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITA--M-------FKGPSSFDILQGH-SKATMLLICNN-AAQGI 143 (256)
Q Consensus 75 ~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~--~-------~~g~~~~~~~~g~-~~~~~~~i~~~-a~~g~ 143 (256)
++|+|..+|++.+. |..+++ +...+++|+++... + +..++-.-...|. -+..|..++.+ ..+..
T Consensus 180 giyqE~~Y~kyGKh--~~EalF---ytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~ 254 (330)
T KOG1583|consen 180 GIYQETTYQKYGKH--WKEALF---YTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYF 254 (330)
T ss_pred HHHHHHHHHHhcCC--hHHHHH---HHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHH
Confidence 99999999997433 344444 55666777765311 0 0010000001111 13344444444 44566
Q ss_pred HHHHHHHHH---HHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 025215 144 LSSFFFKYA---DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDE 208 (256)
Q Consensus 144 ~v~~v~ky~---~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~~~~~ 208 (256)
|+..|+-.. ++.+.+...+++-.++.++|+.+|.++++++..+|+++|++|+.+|.....++|+.
T Consensus 255 CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~~~ 322 (330)
T KOG1583|consen 255 CIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPKAT 322 (330)
T ss_pred HHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 666653211 11222222345557899999999999999999999999999999998866666643
No 16
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.48 E-value=2.8e-12 Score=114.75 Aligned_cols=178 Identities=12% Similarity=0.125 Sum_probs=118.8
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
+..+.++++++++++++|||++++||.++++.++|+.++..++. + . .+..+++++++|++.++.||.
T Consensus 105 l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---~----~------~~~~l~aa~~~a~~~i~~r~~ 171 (296)
T PRK15430 105 GYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG---S----L------PIIALGLAFSFAFYGLVRKKI 171 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---C----c------cHHHHHHHHHHHHHHHHHHhc
Confidence 34678999999999999999999999999999999988764321 0 1 134677889999999998886
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHH----HHHHhhhhHHHHHHHHHHHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLL----ICNNAAQGILSSFFFKYADTILK 157 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~----i~~~a~~g~~v~~v~ky~~~i~k 157 (256)
.++. .......+.+...++.+ ..+. ..... .......++..+.. .+..+++..+....+|+.++...
T Consensus 172 ~~~~-~~~~~~~~~~~~~~~~~----~~~~--~~~~~--~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~ 242 (296)
T PRK15430 172 AVEA-QTGMLIETMWLLPVAAI----YLFA--IADSS--TSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTL 242 (296)
T ss_pred CCCC-chhHHHHHHHHHHHHHH----HHHH--HccCC--cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 3321 11222333333223222 1110 01111 00111111111111 12344556677777888888888
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+....+.++++.+.+++++||+++..+++|+++++.|+.++...
T Consensus 243 s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 243 GFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999998887666543
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.41 E-value=1.9e-12 Score=110.13 Aligned_cols=190 Identities=14% Similarity=0.152 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
.|++-..++.+++.+++++|+++++++++++||++.-.++...++.+ ......|-++++++-..-++.++..|++.+.
T Consensus 120 cKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e--~~t~g~GElLL~lSL~mDGlTg~~Qdrira~ 197 (337)
T KOG1580|consen 120 CKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAE--DKTFGFGELLLILSLAMDGLTGSIQDRIRAS 197 (337)
T ss_pred CCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCc--ccccchHHHHHHHHHHhcccchhHHHHHHHh
Confidence 57788899999999999999999999999999999988764332110 0112258899999999999999999998766
Q ss_pred cCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhh---cCCch--hHH-HHHHHHhhhhHHHHHHHHHHHHHHH
Q 025215 85 QYDTS-IYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDIL---QGHSK--ATM-LLICNNAAQGILSSFFFKYADTILK 157 (256)
Q Consensus 85 ~~~~s-~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~---~g~~~--~~~-~~i~~~a~~g~~v~~v~ky~~~i~k 157 (256)
+...+ -++.+. -+|+.+.....++ +.|+ .++++ +.++. +.. +..+..+.|++++....-+.+..++
T Consensus 198 yq~~g~~MM~~~--NlwStL~Lg~g~l----fTGE-lweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtC 270 (337)
T KOG1580|consen 198 YQRTGTSMMFYT--NLWSTLYLGAGLL----FTGE-LWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTC 270 (337)
T ss_pred hccCchhhHHHH--HHHHHHHhhhhhe----ehhh-HHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeE
Confidence 42211 222222 2456554333333 4454 22222 23332 222 2235566688888877778888888
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCC
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 203 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~ 203 (256)
+..++.+-.+|++.|+++|++|++..|++|..+|+.+...-....+
T Consensus 271 SivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 271 SIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK 316 (337)
T ss_pred EEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence 9999999999999999999999999999999999999977655433
No 18
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.40 E-value=3.9e-11 Score=107.27 Aligned_cols=172 Identities=12% Similarity=-0.007 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
+.++++++++ +||.++.+| +.+.++|+.++...+.+.+ + ....|+++.+++++++|++.++.||..++
T Consensus 106 t~Pi~~~ll~----~~~~~~~~~--~~i~~~Gv~li~~~~~~~~----~--~~~~G~ll~l~aa~~~a~~~v~~r~~~~~ 173 (293)
T PRK10532 106 TGPLAVALFS----SRRPVDFVW--VVLAVLGLWFLLPLGQDVS----H--VDLTGAALALGAGACWAIYILSGQRAGAE 173 (293)
T ss_pred HHHHHHHHHh----cCChHHHHH--HHHHHHHHheeeecCCCcc----c--CChHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455555544 366555554 5667899887654332111 1 12359999999999999999999998665
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHH-----HHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 025215 85 QYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATM-----LLICNNAAQGILSSFFFKYADTILKKY 159 (256)
Q Consensus 85 ~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~-----~~i~~~a~~g~~v~~v~ky~~~i~k~~ 159 (256)
. +......+ ..++.++..+... ..+.. ..+++..| +.++...++..+..+.+|+.++...+.
T Consensus 174 ~---~~~~~~~~-~~~~~~~l~~~~~----~~~~~-----~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 174 H---GPATVAIG-SLIAALIFVPIGA----LQAGE-----ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred C---CchHHHHH-HHHHHHHHHHHHH----HccCc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 3 22223222 3444443333221 22210 01223233 333334444445555677777777777
Q ss_pred HhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 160 SSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 160 a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
...+.++++.+++++++||+++..+++|.++++.|+..+...
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 888899999999999999999999999999999999888765
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.37 E-value=1e-10 Score=102.44 Aligned_cols=180 Identities=18% Similarity=0.157 Sum_probs=119.8
Q ss_pred cchHHHHHHHHHH-HHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 3 SNLKVFVIALLLK-IIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 3 ~q~kil~talls~-l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
..+.+++++++++ +++|||+++++|.++++.++|+.++..++..... . ...|+++.++++++++++.++.|+.
T Consensus 103 ~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-----~-~~~g~~~~l~a~~~~a~~~~~~~~~ 176 (292)
T COG0697 103 IGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-----L-SLLGLLLALAAALLWALYTALVKRL 176 (292)
T ss_pred HHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----H-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577899999997 7779999999999999999999999887753311 0 3469999999999999999999988
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhh-----hhHHHHHHHHHHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAA-----QGILSSFFFKYADTIL 156 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~-----~g~~v~~v~ky~~~i~ 156 (256)
. +. .+......+... +. ............ + ...+...|..+.+.++ +..+....+++.+...
T Consensus 177 ~-~~--~~~~~~~~~~~~-~~----~~~~~~~~~~~~---~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 177 S-RL--GPVTLALLLQLL-LA----LLLLLLFFLSGF---G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred c-CC--ChHHHHHHHHHH-HH----HHHHHHHHhccc---c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 7 32 121111101111 11 111111111111 0 1112233333333333 3444444455555555
Q ss_pred HHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 157 KKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 157 k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
........++++.+.+++++||+++..+++|.++++.|+.+.+..
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 555556788888889999999999999999999999999888765
No 20
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.3e-10 Score=102.24 Aligned_cols=191 Identities=17% Similarity=0.230 Sum_probs=148.8
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
.|++-++++..++.|+|+++..+++..+...|+.+..+.+..++.+..|-+....|+.++...-+.-|+.+...++++|+
T Consensus 118 cKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~ 197 (327)
T KOG1581|consen 118 CKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK 197 (327)
T ss_pred hhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc
Confidence 58899999999999999999999999999999999877655443333344455689999999999999999999999996
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cchhhcCCchhHH---HHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 025215 85 QYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQGHSKATM---LLICNNAAQGILSSFFFKYADTILKKY 159 (256)
Q Consensus 85 ~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~--~~~~~~g~~~~~~---~~i~~~a~~g~~v~~v~ky~~~i~k~~ 159 (256)
. +.+.+.+-..+-+|+.+++...+. .+|.. ...+...++...+ +.-...++|+..+.+.+..-.+++-..
T Consensus 198 ~-k~s~~~mM~~vNLf~~i~~~~~li----~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~ 272 (327)
T KOG1581|consen 198 Y-KVSSLHMMFGVNLFSAILNGTYLI----LQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTT 272 (327)
T ss_pred C-CccHhHHHHHHHHHHHHHHHHhhh----cCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHH
Confidence 4 667666666666788887775533 34432 2223333333223 333556778888888888888998888
Q ss_pred HhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 160 SSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 160 a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
.++.+-++++++|.++||++++..|.+|..+|+.|.++=..
T Consensus 273 I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 273 IMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence 88889999999999999999999999999999999865443
No 21
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.21 E-value=3.3e-12 Score=114.73 Aligned_cols=188 Identities=15% Similarity=0.224 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
+.+++|.++++++.+|+.++.-|++++..+.||.+....+. ..+..|....+++.+..++++++.|+++++
T Consensus 118 ~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~ 188 (316)
T KOG1441|consen 118 LMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---------SFNLFGFISAMISNLAFALRNILSKKLLTS 188 (316)
T ss_pred hcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc---------cccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 45889999999999999999999999999999999887553 234579999999999999999999999964
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHH--HhcCCCcch-hhcCCchhHHHHHHHHhh---hhHHHHHHHHHHHHHHHH
Q 025215 85 QYDTSIYHQNLFLYGYGAIFNFLGIVITA--MFKGPSSFD-ILQGHSKATMLLICNNAA---QGILSSFFFKYADTILKK 158 (256)
Q Consensus 85 ~~~~s~~~~~~~l~~~g~i~~~~~~~~~~--~~~g~~~~~-~~~g~~~~~~~~i~~~a~---~g~~v~~v~ky~~~i~k~ 158 (256)
+ +.+ ..++++..+-.++++..++... ..++..-.+ ...+++...+..++++.+ .++....++...++++-.
T Consensus 189 ~-~~~--~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~ 265 (316)
T KOG1441|consen 189 K-GES--LNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYS 265 (316)
T ss_pred c-ccc--cCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhh
Confidence 3 123 2333433343444443333111 122221100 112333333333333322 345555666677777777
Q ss_pred HHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCC
Q 025215 159 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSK 204 (256)
Q Consensus 159 ~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~ 204 (256)
.+..+..++..+.|+++|++|+|+.+++|.++.+.|+++|++...+
T Consensus 266 V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~ 311 (316)
T KOG1441|consen 266 VAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK 311 (316)
T ss_pred hhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 8887888888899999999999999999999999999999986433
No 22
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.13 E-value=2.8e-09 Score=85.66 Aligned_cols=138 Identities=16% Similarity=0.189 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc----CCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch----hhc-CC--c
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQ----YDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFD----ILQ-GH--S 128 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~----~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~----~~~-g~--~ 128 (256)
|.++.++++++.|+..++.|+.+++. .+.+.+....+....+.++.+|..+ ..|+..... ... .. +
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~---~~e~~~~~~~~~~~~~~~~~~~ 77 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAF---LLEGPQLSSFFSEIFGEELSSD 77 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHH---HHhhhhhhhHHHHhhhhhhcch
Confidence 67889999999999999999999883 2344455545555666665554443 234432111 111 11 2
Q ss_pred hhHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 129 KATMLLICNNA----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 129 ~~~~~~i~~~a----~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
...+..++..+ ..++....+.|+.++++......++.+++.++|+++|||++|..+++|..+.+.|+++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 22333333333 3456666778999999999999999999999999999999999999999999999999974
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.07 E-value=5.1e-09 Score=91.02 Aligned_cols=187 Identities=14% Similarity=0.141 Sum_probs=131.9
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
+|++-..+.+.++-++|+.+..+.+-.++.+|+++..+.|..-++ +.+.+|+.++..|-++-|+-+-.+||.+|.
T Consensus 141 cKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP-----NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~ 215 (367)
T KOG1582|consen 141 CKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP-----NFNLIGVMMISGALLADAVIGNVQEKAMKM 215 (367)
T ss_pred hhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC-----CcceeeHHHHHHHHHHHHHhhHHHHHHHhh
Confidence 578888999999999999999999999999999999988854321 244579999999999999999999999998
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cchhhcCCchhHHHHHHHHhh-hhHHHH---HHHHHHHHHHHH
Q 025215 85 QYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQGHSKATMLLICNNAA-QGILSS---FFFKYADTILKK 158 (256)
Q Consensus 85 ~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~--~~~~~~g~~~~~~~~i~~~a~-~g~~v~---~v~ky~~~i~k~ 158 (256)
.+..+ .+.-+..|..|..+ +++.....|+- .+.+...+++.++...+..+. +-+.+. ...|-..+.+..
T Consensus 216 ~~~ss-~EmvfySy~iG~vf----lf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aa 290 (367)
T KOG1582|consen 216 NPASS-SEMVFYSYGIGFVF----LFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAA 290 (367)
T ss_pred CCCCc-ceEEEeeecccHHH----HHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHH
Confidence 64333 33333334444443 33322334431 122333334445544433333 222222 234555666666
Q ss_pred HHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 159 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 159 ~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
..++.+-.+|+++|+++|..|+|....-|..+|+.|+++-..+
T Consensus 291 tvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ys 333 (367)
T KOG1582|consen 291 TVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYS 333 (367)
T ss_pred HHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhccc
Confidence 6777788899999999999999999999999999999886554
No 24
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.99 E-value=4.2e-08 Score=86.22 Aligned_cols=175 Identities=17% Similarity=0.232 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
.++++..+++.+++|||+++.||.|+++..+||..-.+... ++|+. .+.-|+..++++..-|++ |-
T Consensus 107 InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-------~lpwv------al~la~sf~~Ygl~RK~~-~v 172 (293)
T COG2962 107 INPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-------SLPWV------ALALALSFGLYGLLRKKL-KV 172 (293)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-------CCcHH------HHHHHHHHHHHHHHHHhc-CC
Confidence 46899999999999999999999999999999988766543 23442 234456777777765543 44
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchh-HHHHHHHHhhhh---HHHHHHHHHHHHHHHHHH
Q 025215 85 QYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA-TMLLICNNAAQG---ILSSFFFKYADTILKKYS 160 (256)
Q Consensus 85 ~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~-~~~~i~~~a~~g---~~v~~v~ky~~~i~k~~a 160 (256)
+...+.....+.+.-.+.+ .+ ...++. .+ +....+.. .+++++.-.+.. .+.+..-|...=.+-++.
T Consensus 173 ~a~~g~~lE~l~l~p~al~----yl---~~l~~~-~~-~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~l 243 (293)
T COG2962 173 DALTGLTLETLLLLPVALI----YL---LFLADS-GQ-FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFL 243 (293)
T ss_pred chHHhHHHHHHHHhHHHHH----HH---HHHhcC-ch-hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3223444444333222221 11 112222 11 22212222 222222222222 222223444444556777
Q ss_pred hHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 161 STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 161 ~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
+.+.+.+-.+++++++||+++..+++..+.+-.|+.+|....
T Consensus 244 qYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 244 QYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999998754
No 25
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.96 E-value=1.2e-10 Score=100.17 Aligned_cols=184 Identities=14% Similarity=0.223 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 025215 7 VFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQY 86 (256)
Q Consensus 7 il~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~~ 86 (256)
++...+++|++||-|+.+.|..|++.+..|+.++..+|...++...|. ....|+.++++++.+.|..++.+|.+.|+-
T Consensus 115 ip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggs-np~~GD~lvi~GATlYaVSNv~EEflvkn~- 192 (336)
T KOG2766|consen 115 IPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGS-NPVKGDFLVIAGATLYAVSNVSEEFLVKNA- 192 (336)
T ss_pred hHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCC-CCccCcEEEEecceeeeeccccHHHHHhcC-
Confidence 566788999999999999999999999999999887775444322222 233699999999999999999999999884
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHH-------HHHHHHHHHHH
Q 025215 87 DTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFF-------FKYADTILKKY 159 (256)
Q Consensus 87 ~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v-------~ky~~~i~k~~ 159 (256)
+....--++++||.+++.+-+. ++.... .. -.|++ -...+.. ..++.... +|-.++..-+.
T Consensus 193 --d~~elm~~lgLfGaIIsaIQ~i----~~~~~~-~t-l~w~~---~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nl 260 (336)
T KOG2766|consen 193 --DRVELMGFLGLFGAIISAIQFI----FERHHV-ST-LHWDS---AIFLYLR-FALTMFLLYSLAPILIKTNSATMFNL 260 (336)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHh----hhccce-ee-EeehH---HHHHHHH-HHHHHHHHHHhhHHheecCCceEEEh
Confidence 4445555678999987765422 332100 00 11222 2112222 11111111 22111111111
Q ss_pred HhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 025215 160 SSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEP 209 (256)
Q Consensus 160 a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~~~~~~ 209 (256)
....+=..+.+. ..||-+++|..++.++.+..|.++|.. |+|+++
T Consensus 261 slLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~---re~~~~ 305 (336)
T KOG2766|consen 261 SLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST---REKDEE 305 (336)
T ss_pred hHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec---cccCcH
Confidence 111122333333 678999999999999999999999943 555554
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.93 E-value=5.7e-08 Score=87.92 Aligned_cols=193 Identities=17% Similarity=0.226 Sum_probs=125.5
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
++.+.=+||-.++..+..||+++.+.+++++.+.|++++..++...++.. ......+|.++.+++++..|.+.+..+|-
T Consensus 191 lSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~-~a~~~llG~llaL~sA~~YavY~vllk~~ 269 (416)
T KOG2765|consen 191 LSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDL-PASRPLLGNLLALLSALLYAVYTVLLKRK 269 (416)
T ss_pred hhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccC-CccchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45556688999999999999999999999999999999998876442211 11123579999999999999999998876
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHH----HHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHHH-----HHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIV----ITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFF-----KYA 152 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~----~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~-----ky~ 152 (256)
..++. .-+-++. +.++.|. +++.++. +-..+ +.+..+.- .+...-.+++.+ +.|.+++=.+ -..
T Consensus 270 ~~~eg-~rvdi~l-ffGfvGL-fnllllwP~l~iL~~~-~~e~F~lP--~~~q~~~vv~~~-ligtvvSDylW~~a~~lT 342 (416)
T KOG2765|consen 270 IGDEG-ERVDIQL-FFGFVGL-FNLLLLWPPLIILDFF-GEERFELP--SSTQFSLVVFNN-LIGTVVSDYLWAKAVLLT 342 (416)
T ss_pred ccccc-ccccHHH-HHHHHHH-HHHHHHhHHHHHHHHh-ccCcccCC--CCceeEeeeHhh-HHHHHHHHHHHHHHHHhc
Confidence 55541 1222333 3344443 4443332 21222 32211111 111222223333 4444444222 123
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 153 DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 153 ~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
+..+.+.+.++++.+++++..++=|.++++.+++|.+.|+.|-++.|.++
T Consensus 343 s~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 343 SPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred cchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 34445555566778899999999999999999999999999998888764
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.90 E-value=7.2e-08 Score=85.19 Aligned_cols=195 Identities=16% Similarity=0.235 Sum_probs=125.4
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
.-...++|.-+|+..|-=||.++.-..-+.++.+|+.+...++.+ .+..|.++++++++++|+.-.+.+++
T Consensus 116 ~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq---------f~i~Gf~lv~~aS~~sGlRW~~tQ~l 186 (349)
T KOG1443|consen 116 TKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ---------FNIEGFFLVLAASLLSGLRWAFTQML 186 (349)
T ss_pred ccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc---------eeehhHHHHHHHHHhhhhhHHHHHHH
Confidence 345678999999998766999999999999999999998888753 23369999999999999999999999
Q ss_pred hhccC--CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---chhhcCCch-hHHHHHHHHhhhhHHHHHHHHHHHHH
Q 025215 82 LKSQY--DTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS---FDILQGHSK-ATMLLICNNAAQGILSSFFFKYADTI 155 (256)
Q Consensus 82 lk~~~--~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~---~~~~~g~~~-~~~~~i~~~a~~g~~v~~v~ky~~~i 155 (256)
+++++ ..++...-.++.-+ .....+++...+||... ...|..++. ..+.++...+.+|... +.+-...-+
T Consensus 187 l~~~~~~~~~P~~ti~~l~p~---M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~la-F~l~~sEfl 262 (349)
T KOG1443|consen 187 LRNQPSAKRNPIDTIFHLQPW---MSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLA-FLLEFSEFL 262 (349)
T ss_pred HhcCccccCCCeeeHHHhhhH---HHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 98852 11221111111111 11222344456788631 122322222 2333334444455433 333333333
Q ss_pred HHHHHh--------HHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 025215 156 LKKYSS--------TVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEP 209 (256)
Q Consensus 156 ~k~~a~--------~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~~~~~~ 209 (256)
++.-.+ -..-+.+.++++.+.+++++..-.+|..+++.|+.+|.+.++..|+++
T Consensus 263 Ll~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~~~~~~~~ 324 (349)
T KOG1443|consen 263 LLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEPQNFKRKP 324 (349)
T ss_pred eeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCccccccCC
Confidence 322222 223367889999999999999999999999999999955433444443
No 28
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.83 E-value=2.3e-07 Score=81.11 Aligned_cols=150 Identities=10% Similarity=0.013 Sum_probs=91.9
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
+.++.++++++++++++|||++++||.++++.++|+.++..++. + .. .+.++++++++.+.++.|+.
T Consensus 102 l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-~--------~~----~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 102 GYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-S--------LP----WEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-C--------ch----HHHHHHHHHHHHHHHHHhhc
Confidence 35678999999999999999999999999999999988754321 0 11 24677899999999999886
Q ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHH----HhhhhHHHHHHHHHHHHHHH
Q 025215 82 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICN----NAAQGILSSFFFKYADTILK 157 (256)
Q Consensus 82 lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~----~a~~g~~v~~v~ky~~~i~k 157 (256)
.+++ . .+.. .+.+...|.........+......... ...|..++. ..++..+....+|+.++-.-
T Consensus 169 ~~~~---~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~ 237 (256)
T TIGR00688 169 KNTD---L--AGFC----LETLSLMPVAIYYLLQTDFATVQQTNP--FPIWLLLVLAGLITGTPLLAFVIAANRLPLNLL 237 (256)
T ss_pred CCCC---c--chHH----HHHHHHHHHHHHHHHHhccCcccccCc--hhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHH
Confidence 4321 1 1111 111111222211111111111000111 112222222 34455666666888888888
Q ss_pred HHHhHHHHHHHHHHHHHH
Q 025215 158 KYSSTVATIFTGLASAAL 175 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~l 175 (256)
+....+.|+++.++++++
T Consensus 238 s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 238 GLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888888999999888764
No 29
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.79 E-value=2.9e-07 Score=82.35 Aligned_cols=179 Identities=15% Similarity=0.072 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHhCCCCCHHH----HHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHH
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQ----WEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEY 80 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~q----w~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~ 80 (256)
+.+++.++++.+++||+.++++ +.|+++.++|+.++...+.++. +..+......|+.+.+++.++.+++.+..|+
T Consensus 95 ~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~-~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~ 173 (290)
T TIGR00776 95 FQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA-GIKSEFNFKKGILLLLMSTIGYLVYVVVAKA 173 (290)
T ss_pred HHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc-ccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6677889999999999999999 9999999999988766542211 0000011235999999999999999999986
Q ss_pred HhhccCCCChhH---HHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchh--HHHHHHHHhhhhHHHHHHHH-HHHH
Q 025215 81 ALKSQYDTSIYH---QNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA--TMLLICNNAAQGILSSFFFK-YADT 154 (256)
Q Consensus 81 ~lk~~~~~s~~~---~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~i~~~a~~g~~v~~v~k-y~~~ 154 (256)
. + . .+... +..-+.+.+.+++.+. .+ .+ .+.....+ ....++ ..++..+...-.+ +...
T Consensus 174 ~-~-~--~~~~~~~~~~~g~~~~~~~~~~~~------~~-~~---~~~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~ 238 (290)
T TIGR00776 174 F-G-V--DGLSVLLPQAIGMVIGGIIFNLGH------IL-AK---PLKKYAILLNILPGLM-WGIGNFFYLFSAQPKVGV 238 (290)
T ss_pred c-C-C--CcceehhHHHHHHHHHHHHHHHHH------hc-cc---chHHHHHHHHHHHHHH-HHHHHHHHHHHcccccch
Confidence 5 2 2 12222 2222222333332211 01 00 11110111 111222 2333444333345 6666
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhCCcchHHHH----HHHHHHHHHHHhhc
Q 025215 155 ILKKYSSTVATIFTGLASAALFGHTLTMNFI----LGISIVFISMHQFF 199 (256)
Q Consensus 155 i~k~~a~~~s~v~t~lls~~lfge~lt~~~~----iG~~lVi~gv~ly~ 199 (256)
......++..++.+.+.+++++||+.+..++ +|.++++.|+.+-.
T Consensus 239 ~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 239 ATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 6666777788999999999999999999999 99999999997653
No 30
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=6.7e-09 Score=90.38 Aligned_cols=189 Identities=10% Similarity=0.141 Sum_probs=141.5
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 83 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk 83 (256)
.+..+||.++++++||+|-+..-..+..+++.|--+=.-.+.. .-+....|.++-+.++++-|+-++|.+|.+.
T Consensus 136 sLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~------~~~ls~~GvifGVlaSl~vAlnaiytkk~l~ 209 (347)
T KOG1442|consen 136 SLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS------TGTLSWIGVIFGVLASLAVALNAIYTKKVLP 209 (347)
T ss_pred chhhhHHHHhHHhhcccccccccceeehhheehheeccccccc------cCccchhhhHHHHHHHHHHHHHHHhhheecc
Confidence 3567899999999999999998888888777775332111110 1123457999999999999999999997664
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhhcCCchhHHHHHHHHhhhhHHHHHH----HHHHHHHHH
Q 025215 84 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS--FDILQGHSKATMLLICNNAAQGILSSFF----FKYADTILK 157 (256)
Q Consensus 84 ~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~--~~~~~g~~~~~~~~i~~~a~~g~~v~~v----~ky~~~i~k 157 (256)
.- +..+|.-.+..-.++.++.+|.+. ..|+-+ .++-+-++++.|.+....++.|..+.++ .|-.+.++.
T Consensus 210 ~v-~~~iw~lt~ynnv~a~lLflpll~----lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplTh 284 (347)
T KOG1442|consen 210 PV-GDCIWRLTAYNNVNALLLFLPLLI----LNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTH 284 (347)
T ss_pred cc-cCeehhhHHHHHHHHHHHHHHHHH----HcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEeccccee
Confidence 43 457888888888888887777765 344311 1111233677888888888888877777 566667777
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCC
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 203 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~ 203 (256)
+...+..-+.-.++++.+++|..+..-+.|-.+|+.|...|++..+
T Consensus 285 nISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 285 NISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred eecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence 7777777788889999999999999999999999999999998543
No 31
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.61 E-value=7.2e-07 Score=79.45 Aligned_cols=188 Identities=12% Similarity=0.180 Sum_probs=123.5
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 81 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~ 81 (256)
+.+..++.||+.-.+++|+|.++.-|.++....+|......++.. .+..|+.+++..++..+...++.||.
T Consensus 109 ~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s---------f~~~gY~w~~~n~~~~a~~~v~~kk~ 179 (314)
T KOG1444|consen 109 FKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS---------FNLRGYSWALANCLTTAAFVVYVKKS 179 (314)
T ss_pred HhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce---------ecchhHHHHHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999999998877766532 22249999999999999999999998
Q ss_pred hhccC--CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-c-hhhcCC-chhHHHHHHHHhhhhHHHHHHHHHH----
Q 025215 82 LKSQY--DTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS-F-DILQGH-SKATMLLICNNAAQGILSSFFFKYA---- 152 (256)
Q Consensus 82 lk~~~--~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~-~-~~~~g~-~~~~~~~i~~~a~~g~~v~~v~ky~---- 152 (256)
.+... +......| .++++|.+.+....-|+.. . ..+..+ +..+|..+....+.|..+++..-+.
T Consensus 180 vd~~~l~~~~lv~yN-------nl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~ 252 (314)
T KOG1444|consen 180 VDSANLNKFGLVFYN-------NLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVN 252 (314)
T ss_pred hccccccceeEEeeh-------hHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 76631 11111111 2222222222222223211 0 011111 2345666667777777666654332
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCCC
Q 025215 153 DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 205 (256)
Q Consensus 153 ~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~~ 205 (256)
++.+-...-......+.+....++|.++++.-++|..+-++|-.+|+....++
T Consensus 253 SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 253 SATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred cccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 33222222223335666777778899999999999999999999998864333
No 32
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.59 E-value=7.4e-08 Score=83.76 Aligned_cols=185 Identities=12% Similarity=0.052 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCC-----CCChhhhHHHHHHHHHHHHHHHHHHHH
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL-----GLPVATGAYLYTLIFVTVPSLASVFNE 79 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~-----~~~~~~~G~l~~l~a~~~sala~V~~e 79 (256)
..+++|+++++.+|||++|+..-++..+.+.||+++.-++.-.++.+. +..-...|.+..+.+++..|---++.+
T Consensus 132 ssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR 211 (346)
T KOG4510|consen 132 SSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILR 211 (346)
T ss_pred cChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHH
Confidence 357899999999999999999999999999999999877643322111 111112365555655555554445556
Q ss_pred HHhhccC-CCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHH-HHHhhhhHHHHHHHHHHHHHHH
Q 025215 80 YALKSQY-DTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI-CNNAAQGILSSFFFKYADTILK 157 (256)
Q Consensus 80 ~~lk~~~-~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i-~~~a~~g~~v~~v~ky~~~i~k 157 (256)
++=|+-+ ..+.+.. ...+.+.+++.... -|..+. ..-|-+++....+ +...+++++...-++.-.+=-.
T Consensus 212 ~iGk~~h~~msvsyf----~~i~lV~s~I~~~~----ig~~~l-P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpv 282 (346)
T KOG4510|consen 212 YIGKNAHAIMSVSYF----SLITLVVSLIGCAS----IGAVQL-PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPV 282 (346)
T ss_pred HhhccccEEEEehHH----HHHHHHHHHHHHhh----ccceec-CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCe
Confidence 6645521 1222222 23333333333211 121100 1112222211111 2223345555544433333233
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
+..++.-++++.+-.+++|||-+|++.+.|+.+|+.++..-
T Consensus 283 aim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 283 AIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred ehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 45556677889999999999999999999999999887543
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.40 E-value=4.4e-06 Score=63.87 Aligned_cols=123 Identities=17% Similarity=0.206 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcC--CchhHHHHHHHHhhhhHHHH
Q 025215 69 TVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQG--HSKATMLLICNNAAQGILSS 146 (256)
Q Consensus 69 ~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~i~~~a~~g~~v~ 146 (256)
++||...++.|+..|+. ++...+.+-+..+.+ .++.... .+.. ....... .-......++..+++..+..
T Consensus 1 ~~~a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI---SPLSITFWRFLIAGI-LLILLLI---LGRK-PFKNLSPRQWLWLLFLGLLGTALAYLLYF 72 (126)
T ss_pred ceeeeHHHHHHHHhccC---CHHHHHHHHHHHHHH-HHHHHHh---hccc-cccCCChhhhhhhhHhhccceehHHHHHH
Confidence 36788899999988873 455555555555554 2222221 1211 1001111 11122223344556667777
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 147 FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 147 ~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
..+|+.+...........++++.++++++++|+++..+++|..+++.|+++.+
T Consensus 73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 77888888888888889999999999999999999999999999999997653
No 34
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.23 E-value=0.00011 Score=58.00 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHH
Q 025215 59 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNN 138 (256)
Q Consensus 59 ~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~ 138 (256)
.|+++++.++++.+.+.+..|+-+++..+.+.... .+..+. .. .+. ..+.++.+...
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~--------~~~~~~-~~----~~p----------~~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD--------FIAALL-AF----GLA----------LRAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH--------HHHHHH-HH----hcc----------HHHHHHHHHHH
Confidence 37889999999999999999988776422221110 010000 00 010 01344444444
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH--HhCCcchHHHHHHHHHHHHHHHhhcCCCC
Q 025215 139 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAA--LFGHTLTMNFILGISIVFISMHQFFSPLS 203 (256)
Q Consensus 139 a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~--lfge~lt~~~~iG~~lVi~gv~ly~~~~~ 203 (256)
++...+..+.+|+.+.-...-..+...+++.++++. +|||++|+.+++|.++++.|+++.+++++
T Consensus 59 ~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 59 ALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 555555555566655333222223344556666664 89999999999999999999999877543
No 35
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.05 E-value=3.7e-05 Score=65.61 Aligned_cols=192 Identities=11% Similarity=0.142 Sum_probs=120.6
Q ss_pred cchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 025215 3 SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYAL 82 (256)
Q Consensus 3 ~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~l 82 (256)
-|+.|+..|..-++++|.|.+.....+.++.+.......++|....+ ........|++++..-|+.++..-...|+..
T Consensus 101 KNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~--~~~~~lN~GY~Wm~~NclssaafVL~mrkri 178 (309)
T COG5070 101 KNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASA--FKAQILNPGYLWMFTNCLSSAAFVLIMRKRI 178 (309)
T ss_pred ccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHH--HHhcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence 46788999999999999999999999999999988887777653321 1111112599999999988887777777665
Q ss_pred hccCCCChhHHHHHHHHHHHHHHHHHHHH-HHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHH----HHHHHHHHHHH
Q 025215 83 KSQYDTSIYHQNLFLYGYGAIFNFLGIVI-TAMFKGPSSFDILQGHSKATMLLICNNAAQGILSS----FFFKYADTILK 157 (256)
Q Consensus 83 k~~~~~s~~~~~~~l~~~g~i~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~----~v~ky~~~i~k 157 (256)
|-..... ...-.+.-++++|.++. +.++|+..+.+.-.+.+.-....++-.++....++ +..|-.++.+-
T Consensus 179 ~ltNf~d-----~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTty 253 (309)
T COG5070 179 KLTNFKD-----FDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTY 253 (309)
T ss_pred cccccch-----hhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHH
Confidence 5421111 11123445555665533 33456543433445554433222233333333333 33333333333
Q ss_pred HHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 158 KYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 158 ~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
...-++.-.-..+.+..+||+|.+...+....+=.++-.+|...
T Consensus 254 SMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 254 SMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred HHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 33334444567789999999999999999988888777788764
No 36
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.01 E-value=0.00049 Score=60.78 Aligned_cols=180 Identities=14% Similarity=0.118 Sum_probs=103.1
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHH----HHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHH
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWE----ALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNE 79 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~----al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e 79 (256)
.++++.+++.++++++|--+..+|. |++++++|+.+...++.+++....+ ....-|+..++++.+.+..+.+..+
T Consensus 80 g~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~-~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 80 GLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSK-SNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred hHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999988888876 8999999999988877654321111 1122488899999999988888865
Q ss_pred HHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 025215 80 YALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKY 159 (256)
Q Consensus 80 ~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~ky~~~i~k~~ 159 (256)
.. +-++..-+.-|.+-+.+.+.+++. ... ...++..++..++.=+.-+++++..-...+. ..+..+|
T Consensus 159 ~~-~~~~~~~~lPqaiGm~i~a~i~~~--------~~~---~~~~~k~~~~nil~G~~w~ignl~~~is~~~-~G~a~af 225 (269)
T PF06800_consen 159 AF-HVSGWSAFLPQAIGMLIGAFIFNL--------FSK---KPFFEKKSWKNILTGLIWGIGNLFYLISAQK-NGVATAF 225 (269)
T ss_pred hc-CCChhHhHHHHHHHHHHHHHHHhh--------ccc---ccccccchHHhhHHHHHHHHHHHHHHHhHHh-ccchhhh
Confidence 42 222111122222222222222111 111 1123322222222112223333332222221 1222222
Q ss_pred H-hHHHHHHHHHHHHHHhCCcchH----HHHHHHHHHHHHHHh
Q 025215 160 S-STVATIFTGLASAALFGHTLTM----NFILGISIVFISMHQ 197 (256)
Q Consensus 160 a-~~~s~v~t~lls~~lfge~lt~----~~~iG~~lVi~gv~l 197 (256)
. +-++++++.+-++++++|+=+. ..++|.++++.|..+
T Consensus 226 ~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 226 TLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 2 3467899999999999998664 467888888887643
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.95 E-value=8.9e-05 Score=57.91 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhh
Q 025215 61 YLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAA 140 (256)
Q Consensus 61 ~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~ 140 (256)
..+.+++++.+++..++.|--+++. ++...+.--.....++..... ...|..+.. ...+...|+.+..+++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v---dp~~At~IRtiVi~~~l~~v~----~~~g~~~~~--~~~~~k~~lflilSGl 75 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV---DPDFATTIRTIVILIFLLIVL----LVTGNWQAG--GEIGPKSWLFLILSGL 75 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc---CccHHHHHHHHHHHHHHHHHH----HhcCceecc--cccCcceehhhhHHHH
Confidence 4577889999999999888777753 222222221222222211111 234432211 1123444444444443
Q ss_pred hhHHHHHHHHHHHHHHHHH------HhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 141 QGILSSFFFKYADTILKKY------SSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 141 ~g~~v~~v~ky~~~i~k~~------a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
.+-..... |..++.+.- ....+++++.++|++++||++|..+.+|..++.+|..+-
T Consensus 76 a~glswl~--Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 76 AGGLSWLL--YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHH--HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 22211111 223333333 346788999999999999999999999999999998654
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.95 E-value=0.00013 Score=61.17 Aligned_cols=183 Identities=15% Similarity=0.148 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025215 6 KVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 85 (256)
Q Consensus 6 kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~ 85 (256)
+-.|.-++++..||.|+...+..+.++...|++++.+.+..- ....+|+.+.+.+++.+|++-|..|+...+-
T Consensus 89 NaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~-------a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA 161 (290)
T KOG4314|consen 89 NAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH-------ADEIIGIACAVGSAFMAALYKVLFKMFIGNA 161 (290)
T ss_pred hHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh-------hhhhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 346777899999999999999999999999999888665311 1345799999999999999999999887652
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHH---HhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHHHH----HHHHHHHH
Q 025215 86 YDTSIYHQNLFLYGYGAIFNFLGIVITA---MFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFK----YADTILKK 158 (256)
Q Consensus 86 ~~~s~~~~~~~l~~~g~i~~~~~~~~~~---~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~k----y~~~i~k~ 158 (256)
++-...-+++..|. +|+.....+. -+.|.+....|.. ..|.-....+.-.+...+..+ ..+.++-+
T Consensus 162 ---n~Gdaa~FmS~LGF-~NL~~~~~~~lIL~~T~VE~~qsFA~---~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilIS 234 (290)
T KOG4314|consen 162 ---NFGDAAHFMSCLGF-FNLCFISFPALILAFTGVEHLQSFAA---APWGCLCGAAGLSLAFNFLINFGIALLNPILIS 234 (290)
T ss_pred ---cchhHHHHHHHHHH-HHHHHHhhhHHHHHHhchHHHHHHhh---CCchhhhhHHHHHHHHhhheeehhhhhchhhhe
Confidence 22222222222221 2222211111 1333322222221 122222111111111111111 12233333
Q ss_pred HHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 159 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 159 ~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
.....++........++-+-.++..++.|.+++.+|-.+.-.|+
T Consensus 235 iG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 235 IGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred ehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 33333444556667666677899999999999999998877664
No 39
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.89 E-value=0.00057 Score=60.57 Aligned_cols=130 Identities=10% Similarity=-0.026 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHH----HH
Q 025215 61 YLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLL----IC 136 (256)
Q Consensus 61 ~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~----i~ 136 (256)
+++.+++++++|...+..|+..+++ +.. + .+.+..+.++.+|... ....+ ..+...+...|.. .+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~~-~-~~~~~~~~~~l~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE---PDF-L-WWALLAHSVLLTPYGL----WYLAQ--VGWSRLPATFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch---hHH-H-HHHHHHHHHHHHHHHH----Hhccc--CCCCCcchhhHHHHHHHHH
Confidence 4677889999999999998776663 221 2 2222333333333222 11100 0011111111211 22
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 137 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 137 ~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
..+.+..+....+++.+.-.........++++.+++.++++|+++..+++|.++++.|+.+-..+
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 33344455555567766665555566789999999999999999999999999999999876543
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.70 E-value=5.2e-05 Score=58.16 Aligned_cols=45 Identities=31% Similarity=0.471 Sum_probs=41.3
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCC
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLP 46 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~ 46 (256)
+.++.++++++++++++|||+++++|.++++.++|++++..++..
T Consensus 66 i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 66 IFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 457899999999999999999999999999999999999887753
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.64 E-value=0.0031 Score=56.38 Aligned_cols=134 Identities=8% Similarity=0.009 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--hhhcCCchhHH--HH
Q 025215 59 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSF--DILQGHSKATM--LL 134 (256)
Q Consensus 59 ~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~--~~~~g~~~~~~--~~ 134 (256)
.|++++++++++|+...++.|.. .+ .++.....+-.+++.++.++... ..++... ..+.......+ ..
T Consensus 8 ~g~~~~l~a~~~wg~~~~~~k~~-~~---~~~~~~~~~R~~~a~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 79 (296)
T PRK15430 8 QGVLLALAAYFIWGIAPAYFKLI-YY---VPADEILTHRVIWSFFFMVVLMS----ICRQWSYLKTLIQTPQKIFMLAVS 79 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cC---CCHHHHHHHHHHHHHHHHHHHHH----HHccHHHHHHHHcCHHHHHHHHHH
Confidence 59999999999999999999654 22 34444444434555543333222 1121100 01111111111 22
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 135 ICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 135 i~~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
.+..+....+..+..+|.............++++.+++.++++|+++..+++|.++.+.|+.+...
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 233444555566667777777777778889999999999999999999999999999999987653
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.60 E-value=0.0043 Score=54.06 Aligned_cols=132 Identities=7% Similarity=0.008 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhhcCCchh-HHHHH-
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS--FDILQGHSKA-TMLLI- 135 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~--~~~~~g~~~~-~~~~i- 135 (256)
|++++++++++|+..++..|.+ .+ .++.....+=.+++.++.++... ..+... ...+...+.. .+..+
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~~-~~---~~~~~i~~~R~~~a~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKLL-KP---LPATDILGHRMIWSFPFMLLSVT----LFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-cc---CCHHHHHHHHHHHHHHHHHHHHH----HHcchHHHHHHHhCcccchHHHHHH
Confidence 7889999999999999999863 22 34443333334444443222221 111100 0011111111 11111
Q ss_pred ---HHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 136 ---CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 136 ---~~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
+..+....+.....+|.+...........++++.+++.++++|+++..+++|.++.+.|+.+-.
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 1123334445555677666666677778999999999999999999999999999999987543
No 43
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.36 E-value=0.00048 Score=62.03 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=35.4
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccC
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR 43 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~ 43 (256)
-+.++++++++..++|||++++.|.|.++.++|+.++..-
T Consensus 84 ~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 84 ALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred hhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 3568899999999999999999999999999998876543
No 44
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.35 E-value=0.029 Score=49.01 Aligned_cols=164 Identities=15% Similarity=0.084 Sum_probs=89.1
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHH
Q 025215 15 KIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQN 94 (256)
Q Consensus 15 ~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~ 94 (256)
..+.-||..-.-|.++.+ .|+.+..-.+.. ..+....|..+.+.+..||+.+=+..+|.-+..+ . .+.
T Consensus 112 A~~~sRr~~d~vwvaLAv--lGi~lL~p~~~~------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~--g--~~g 179 (292)
T COG5006 112 ALLSSRRLRDFVWVALAV--LGIWLLLPLGQS------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH--G--TAG 179 (292)
T ss_pred HHHhccchhhHHHHHHHH--HHHHhheeccCC------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC--C--chH
Confidence 344557776666776655 454444322211 1123447999999999999999998888754321 1 122
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHH-----HHHHHHHHHHHHHhHHHHHHH
Q 025215 95 LFL-YGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSF-----FFKYADTILKKYSSTVATIFT 168 (256)
Q Consensus 95 ~~l-~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~-----v~ky~~~i~k~~a~~~s~v~t 168 (256)
.-. ..++.++.+|.-. ...| ..++ ++.....-+..++-+..+-| .++....-.-..-.++.+.+.
T Consensus 180 ~a~gm~vAaviv~Pig~---~~ag---~~l~---~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~a 250 (292)
T COG5006 180 VAVGMLVAALIVLPIGA---AQAG---PALF---SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALA 250 (292)
T ss_pred HHHHHHHHHHHHhhhhh---hhcc---hhhc---ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHH
Confidence 211 1222232222211 1111 1122 22222111222222222222 233333333333345677899
Q ss_pred HHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 169 GLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 169 ~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
.+.+.+++||.+|..|++|...|+.++-=..
T Consensus 251 Al~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 251 ALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999998884333
No 45
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.28 E-value=0.013 Score=52.46 Aligned_cols=122 Identities=15% Similarity=0.203 Sum_probs=79.5
Q ss_pred HHHHHHHHhhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHH-HHHHHHhhhhHHHHHHHHH
Q 025215 74 ASVFNEYALKSQYDT-SIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATM-LLICNNAAQGILSSFFFKY 151 (256)
Q Consensus 74 a~V~~e~~lk~~~~~-s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~-~~i~~~a~~g~~v~~v~ky 151 (256)
.+++.|++.++++.. ..+.-+....++..+++.+.... ..... ...-+...+ ...+...+...+....++|
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 87 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSL---FKFPK----SRKIPLKKYAILSFLFFLASVLSNAALKY 87 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHh---ccccC----CCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 458899999886444 23333333344444443332221 11010 011112222 2234455556666677888
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 152 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 152 ~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
.+--+....-+.+++.+++++.++++++.+..+.++.+++.+|+.++...+
T Consensus 88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~ 138 (303)
T PF08449_consen 88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD 138 (303)
T ss_pred CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence 887777777888999999999999999999999999999999999998764
No 46
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.21 E-value=0.0055 Score=46.82 Aligned_cols=65 Identities=22% Similarity=0.212 Sum_probs=51.4
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 136 CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 136 ~~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.......+..+..+|... .-.....+.++++.+++.++|+|+++..+++|.++++.|+.+-..+
T Consensus 43 ~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 43 LGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred HHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 3333455566666778875 4445556899999999999999999999999999999999877664
No 47
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.19 E-value=0.0056 Score=47.70 Aligned_cols=66 Identities=20% Similarity=0.192 Sum_probs=47.0
Q ss_pred HHHhhhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 136 CNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 136 ~~~a~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
...++.-.+.+..+|+.+ ++.-+.-+.+..+.+.+.++++|||++|+.+++|.++++.|+..-+..
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 333334444455555533 222233345788899999999999999999999999999999887654
No 48
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.14 E-value=0.0077 Score=46.20 Aligned_cols=41 Identities=22% Similarity=0.345 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 161 STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 161 ~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+....+.+.+.+.++|+|++++.+++|.++++.|+..-+..
T Consensus 64 ~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 64 SGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34678899999999999999999999999999999887664
No 49
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.04 E-value=0.0067 Score=46.53 Aligned_cols=57 Identities=11% Similarity=0.147 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 142 GILSSFFFKYADT-ILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 142 g~~v~~v~ky~~~-i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
..+....+|+.+- +.-... +..++.+.++|.++|||+++..+++|.++++.|+.+-.
T Consensus 51 ~~~~~~al~~iplg~Ay~~~-~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 51 MVLWLLVLQNVPVGIAYPML-SLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHhhCChHHHHHHH-HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3334444554432 222233 37889999999999999999999999999999997653
No 50
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.00 E-value=0.017 Score=49.96 Aligned_cols=120 Identities=11% Similarity=-0.002 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHHHH
Q 025215 71 PSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFK 150 (256)
Q Consensus 71 sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~k 150 (256)
||...+..|..++.. .+.+...+.-.+.+.++..+... .. . .. ..+........+.......+....++
T Consensus 1 Wg~~~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~----~~-~-~~---~~~~~~~~~~~~~~~l~~~~~~~a~~ 69 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLR----RR-P-PL---KRLLRLLLLGALQIGVFYVLYFVAVK 69 (260)
T ss_pred CcchHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHH----hc-c-CH---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666665552 45555555545555544332211 11 1 00 11111222223444455555666677
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 151 YADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 151 y~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
|.+.-.........++++.+++.++++|+++..+++|..+.++|+.+...+
T Consensus 70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD 120 (260)
T ss_pred hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence 877666677778899999999999999999999999999999999887654
No 51
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.99 E-value=0.0012 Score=50.67 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhcc
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL 42 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~ 42 (256)
++.++.+++++++++|||++++||.++.+.++|++++..
T Consensus 71 ~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 71 SLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 477899999999999999999999999999999987753
No 52
>PRK11689 aromatic amino acid exporter; Provisional
Probab=96.96 E-value=0.036 Score=49.43 Aligned_cols=129 Identities=15% Similarity=0.061 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchh-HHHHHHHH
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA-TMLLICNN 138 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~-~~~~i~~~ 138 (256)
++++.++++++|+..-+..|..++. .++......=+..+.++.++. ...+. .....+. .....+..
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~~---~~P~~~~~~R~~~a~l~l~~~------~~~~~----~~~~~~~~~~~~~l~~ 71 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSES---LGPVGGAAMIYSVSGLLLLLT------VGFPR----LRQFPKRYLLAGGLLF 71 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcc---CChHHHHHHHHHHHHHHHHHH------ccccc----cccccHHHHHHHhHHH
Confidence 5778899999999998888877655 344444443344444432211 11110 0111111 11111112
Q ss_pred hhhhHHHHHHHHH----HHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 139 AAQGILSSFFFKY----ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 139 a~~g~~v~~v~ky----~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
.....+...-.+| .++..........++++.+++.++++|+++..+++|.++.+.|+.+-..+
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 2222222222333 34444556677889999999999999999999999999999999877654
No 53
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=96.94 E-value=0.041 Score=48.98 Aligned_cols=130 Identities=11% Similarity=-0.017 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchh--HHHHHHHH
Q 025215 61 YLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA--TMLLICNN 138 (256)
Q Consensus 61 ~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~i~~~ 138 (256)
.+..+..+++||...+..|..+.. .++..-...=+.++.++.++... .++.... ...++. ....++..
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~---~~p~~~~~~R~~~a~l~ll~~~~----~~~~~~~---~~~~~~~~~~~g~~~~ 79 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVES---WPPLMMAGVRFLIAGILLLAFLL----LRGHPLP---TLRQWLNAALIGLLLL 79 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHH----HhCCCCC---cHHHHHHHHHHHHHHH
Confidence 456777889999999999876553 34444433334444443333221 2221110 000111 11112222
Q ss_pred hhhhHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 139 AAQGILSSFFF-KYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 139 a~~g~~v~~v~-ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.+..+..+.. ++.++-.........++++.+++.+ ++|+++..+++|..+.+.|+++-..+
T Consensus 80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~ 142 (292)
T PRK11272 80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG 142 (292)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence 22223333333 4444444555667789999999975 79999999999999999999877543
No 54
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.86 E-value=0.066 Score=49.43 Aligned_cols=132 Identities=14% Similarity=0.077 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHh
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNA 139 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a 139 (256)
-+..+++..++++-..+..+..+|.. .++......=...+.++.++... ..+..+. ....++..|..++..+
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G--~~~~~~~~~R~~iA~l~Ll~~~~---~~~~~~~---~~~~~~~~~~~l~l~g 85 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKG--LNIYPFLGYSYLLASLLLLPSLF---FTNRSRS---LPPLSVSILSKIGLLG 85 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCC--CCccHHHHHHHHHHHHHHHHHHH---HHHHhcc---cCcchHHHHHHHHHHH
Confidence 35667778888888889999998774 33333222223333333222222 1121110 0111122222222222
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH------hCCcchHHHHHHHHHHHHHHHhhc
Q 025215 140 ----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAAL------FGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 140 ----~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~l------fge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
....+...-++|.++...+...+..|+++.+++.++ ++|+++..+++|.++.+.|+.+-.
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 223344555788888888888999999999999999 699999999999999999997644
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=96.80 E-value=0.076 Score=47.41 Aligned_cols=126 Identities=14% Similarity=0.085 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhh
Q 025215 62 LYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ 141 (256)
Q Consensus 62 l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~ 141 (256)
++.++++++|+...+..|..+.+ .++......=+..+.+..++ + ....+. . ........++.....
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~---~~p~~~~~~R~~~a~~~l~~--~----~~~~~~-~----~~~~~~~g~~~~~~~ 72 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHN---MPPLMLAGLRFMLVAFPAIF--F----VARPKV-P----LNLLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHH--H----hcCCCC-c----hHHHHHHHHHHHHHH
Confidence 45788899999999999877654 34444333323333322111 1 111110 0 001111111111111
Q ss_pred hHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 142 GILSSFFFKYA-DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 142 g~~v~~v~ky~-~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
..+.....+|. .+-......+..++++.+++.++++|+++..+++|.++.+.|+.+-..+
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~ 133 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED 133 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence 11222233452 3333344566788999999999999999999999999999999776643
No 56
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=96.71 E-value=0.0026 Score=48.24 Aligned_cols=40 Identities=25% Similarity=0.275 Sum_probs=36.8
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhc
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ 41 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~ 41 (256)
+.++.++++.+++++++||+++++||.|+++.+.|+.++.
T Consensus 86 ~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 86 LQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999998764
No 57
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.68 E-value=0.03 Score=50.48 Aligned_cols=118 Identities=11% Similarity=0.028 Sum_probs=74.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHH
Q 025215 57 ATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLIC 136 (256)
Q Consensus 57 ~~~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~ 136 (256)
..+|..+.++++++.+.+.++.||-.++.++.+.... -. . .+.+. ++..|..++
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-~~------~-----------------~~~l~--~~~W~~G~~ 58 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-SG------G-----------------RSYLR--RPLWWIGLL 58 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ch------h-----------------hHHHh--hHHHHHHHH
Confidence 3479999999999999999999987766422111100 00 0 00000 122233333
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 137 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 137 ~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
..++|.++-...+.++...+-.-..+++++++.+++..+++|+++....+|.++++.|..+...
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 3344433322333355544444445689999999999999999999999999999999966543
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=96.61 E-value=0.12 Score=46.19 Aligned_cols=61 Identities=10% Similarity=0.095 Sum_probs=50.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 139 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 139 a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
+....+....++|.+.-......+..++++.+++.++++|+++..+++|.++++.|+.+..
T Consensus 76 ~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 76 TIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 3444455556778887777788888999999999999999999999999999999997654
No 59
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.58 E-value=0.16 Score=46.54 Aligned_cols=63 Identities=13% Similarity=0.151 Sum_probs=52.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 140 AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 140 ~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
.++.++...++|.+-.......+.++++++++|++++++++++.+++|..+++.|+.+-...+
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 466666677788876666677788999999999999999999999999999999997766553
No 60
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.46 E-value=0.038 Score=41.99 Aligned_cols=62 Identities=18% Similarity=0.220 Sum_probs=45.1
Q ss_pred hhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 140 AQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 140 ~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.-.+.+..+|+.+ ++.-+.=+.+.++.+.+.++++|+|+++..+++|..+++.|+..-+..
T Consensus 42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 33444445555533 232333356778899999999999999999999999999999776543
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.34 E-value=0.41 Score=41.43 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHH
Q 025215 59 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNN 138 (256)
Q Consensus 59 ~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~ 138 (256)
.+....+...+.++......+...+.. .+.......-...+.++.. ... ..+..........+-+......+..
T Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (292)
T COG0697 7 LGLLALLLWGLLWGLSFIALKLAVESL--DPFLFAAALRFLIAALLLL---PLL-LLEPRGLRPALRPWLLLLLLALLGL 80 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc--CChHHHHHHHHHHHHHHHH---HHH-HhhcccccccccchHHHHHHHHHHH
Confidence 466777778888888888877665441 3333333322333333211 111 0111000000111001222223333
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 139 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASA-ALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 139 a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~-~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
+....+.....+|...-.........++++.+++. ++++|+++..+++|..+.+.|+.+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~ 145 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGG 145 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCC
Confidence 44444444445556655556666788899999996 77799999999999999999999988864
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.29 E-value=0.18 Score=44.96 Aligned_cols=127 Identities=17% Similarity=0.055 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHH-HH---
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATML-LI--- 135 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~-~i--- 135 (256)
|+++.++++++|+..++..|++. +. .+.+.. . ...+.++..... ..+..+. ++ .+..+. .+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~--~~~~~~--~-~~~g~l~~~~~~---~~~~~~~----~~--~~~~~~~g~l~G 66 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GG--PYSQTL--G-TTFGALILSIAI---AIFVLPE----FW--ALSIFLVGLLSG 66 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CC--HHHHHH--H-HHHHHHHHHHHH---HHHhCCc----cc--ccHHHHHHHHHH
Confidence 67888999999999999998764 21 122221 1 122222211111 1122211 11 111111 12
Q ss_pred HHHhhhhHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHhCCcchHHH----HHHHHHHHHHHHhhcCC
Q 025215 136 CNNAAQGILSSFFFKYADTIL-KKYSSTVATIFTGLASAALFGHTLTMNF----ILGISIVFISMHQFFSP 201 (256)
Q Consensus 136 ~~~a~~g~~v~~v~ky~~~i~-k~~a~~~s~v~t~lls~~lfge~lt~~~----~iG~~lVi~gv~ly~~~ 201 (256)
+.-+++++......||...-+ -...+...++++.+.+.++|+|+.+..+ ++|.++++.|+++....
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 224455565556666654222 2233446778888999999999999999 99999999999887554
No 63
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.18 E-value=0.07 Score=40.83 Aligned_cols=57 Identities=19% Similarity=0.085 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 142 GILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 142 g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
..+.+..+|+.+ ++.-+.=+....+.+.+.+.++|+|++++.+++|.++++.|+..-
T Consensus 49 f~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 49 FSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 334444444432 222233345677889999999999999999999999999999764
No 64
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.16 E-value=0.27 Score=45.16 Aligned_cols=54 Identities=11% Similarity=0.092 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 147 FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 147 ~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
..+++.+.-......+.+|+++.+++.++++|+++..+++|.+++++|+.+-..
T Consensus 133 ~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 133 ISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 335566666666667789999999999999999999999999999999987653
No 65
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.14 E-value=0.078 Score=40.29 Aligned_cols=42 Identities=7% Similarity=0.191 Sum_probs=36.2
Q ss_pred HHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 159 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 159 ~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
.=+.+.++.+.+.++++|+|++++.+++|..+++.|+..-+.
T Consensus 61 vW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 61 VWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 334567788999999999999999999999999999977543
No 66
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.08 E-value=0.55 Score=37.37 Aligned_cols=127 Identities=19% Similarity=0.166 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhh
Q 025215 61 YLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAA 140 (256)
Q Consensus 61 ~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~ 140 (256)
+++.+++-.+-++++.+|-++-|+. .+++......+..|.++.....+. .++. ....+.+.+|+.|.. -.+
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~--gs~~~as~i~~~~G~i~~~i~~~~---~~~~-~~~~~~~~p~w~~lG---G~l 73 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKAL--GSPLVASFISFGVGFILLLIILLI---TGRP-SLASLSSVPWWAYLG---GLL 73 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHHHHHH---hccc-ccchhccCChHHhcc---HHH
Confidence 4566777788888999998887763 356777777777777765544332 2322 222334445555442 111
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHH-Hh---CCcchHHHHHHHHHHHHHHHh
Q 025215 141 QGILSSFFFKYADTILKKYSSTV-----ATIFTGLASAA-LF---GHTLTMNFILGISIVFISMHQ 197 (256)
Q Consensus 141 ~g~~v~~v~ky~~~i~k~~a~~~-----s~v~t~lls~~-lf---ge~lt~~~~iG~~lVi~gv~l 197 (256)
|...+.... +.-.......+.. .++.+.++..+ +| .+++++..++|.++++.|+++
T Consensus 74 G~~~V~~~~-~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 74 GVFFVLSNI-ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHH-HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 211111111 1111111111111 12233344443 33 368999999999999999864
No 67
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.89 E-value=0.16 Score=44.74 Aligned_cols=63 Identities=19% Similarity=0.101 Sum_probs=37.4
Q ss_pred hhhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHH-HhCCc-----chHHHHHHHHHHHHHHHhhcCC
Q 025215 139 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAA-LFGHT-----LTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 139 a~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~-lfge~-----lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.|++++-.++|... ++--..-++...+..+..+-+ +||.+ -.+.-.+|.+++++|..+|...
T Consensus 66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 445554444444332 222223334555666666644 77654 3456789999999999999764
No 68
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.87 E-value=0.22 Score=45.76 Aligned_cols=136 Identities=13% Similarity=0.079 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHH-HHHhcCCCcchhhcCCchhHHHHH-
Q 025215 58 TGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVI-TAMFKGPSSFDILQGHSKATMLLI- 135 (256)
Q Consensus 58 ~~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~-~~~~~g~~~~~~~~g~~~~~~~~i- 135 (256)
.+|+++.+++++|++.-.+-.|| .|+- -| +++|. ..++...+...+. ..+..+ .-.+.++..+...+...
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w----~w-E~~W~-v~gi~~wl~~~~~~g~~~~~-~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKKW----SW-ETMWS-VGGIFSWLILPWLIAALLLP-DFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCCC----ch-hHHHH-HHHHHHHHHHHHHHHHHHhh-hHHHHHHhcCHHHHHHHH
Confidence 36999999999999987777765 3432 12 33354 4443222211111 111111 11123333444333222
Q ss_pred ---HHHhhhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCc-------chHHHHHHHHHHHHHHHhhcCC
Q 025215 136 ---CNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHT-------LTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 136 ---~~~a~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~-------lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.-++|++.....+||.. +...+.++....+.+.+...+++||= -...-++|.+++++|+.+-...
T Consensus 78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334457777777777765 45556667778899999999999852 2245788999999999887774
No 69
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.85 E-value=0.021 Score=43.47 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccC
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR 43 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~ 43 (256)
.-++.+++.+++++||++++.|+.++.++++|++.....
T Consensus 65 iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 65 IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 456789999999999999999999999999999887644
No 70
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.80 E-value=0.021 Score=43.36 Aligned_cols=39 Identities=26% Similarity=0.355 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccC
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR 43 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~ 43 (256)
.-++.|++.+++++||+++..|+.++.++++|++.....
T Consensus 66 iG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 66 IGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 457889999999999999999999999999999887654
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=95.73 E-value=0.026 Score=43.24 Aligned_cols=40 Identities=23% Similarity=0.288 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCC
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS 44 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~ 44 (256)
+..+.+++.+++++||++++.|+.++.++++|++.+...+
T Consensus 66 lG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 66 VGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4577889999999999999999999999999999987644
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.71 E-value=0.026 Score=43.98 Aligned_cols=40 Identities=18% Similarity=0.402 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCC
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS 44 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~ 44 (256)
.-++.+++.+++++||++++.||.++.++++|++.+...+
T Consensus 66 iG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 66 IGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 4577889999999999999999999999999999887655
No 73
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.67 E-value=0.026 Score=43.48 Aligned_cols=67 Identities=16% Similarity=0.252 Sum_probs=52.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHh
Q 025215 131 TMLLICNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ 197 (256)
Q Consensus 131 ~~~~i~~~a~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~l 197 (256)
.+...+.+..|.+...+.+...| ++.-+.+++++-++|.+.+.++.+|..+...++|+.+++.|+.+
T Consensus 44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 33444556667776666666555 66677888999999999999888888899999999999999854
No 74
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.48 E-value=0.081 Score=39.14 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Q 025215 142 GILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV 191 (256)
Q Consensus 142 g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lV 191 (256)
-.+.+..+|+.+ ++.-+.-+...++.+.+++.++|||++|..+++|.+++
T Consensus 43 ~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 43 FYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 344444455543 22233345677889999999999999999999999875
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.37 E-value=0.036 Score=42.42 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhc
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ 41 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~ 41 (256)
.-.+.+++.+++++||++++.||.++.++++|++...
T Consensus 71 iG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 71 FGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4567889999999999999999999999999998764
No 76
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=95.25 E-value=0.049 Score=42.94 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=31.0
Q ss_pred HHHHHHHHH--HhCCCCCHHHHHHHHHHHHHHhHhccCCC
Q 025215 8 FVIALLLKI--IMKRRFSIIQWEALALLLIGISVNQLRSL 45 (256)
Q Consensus 8 l~talls~l--~Lk~rls~~qw~al~l~~~Gv~iv~~~~~ 45 (256)
..++++++. ++||++++.||.|+++.++|+.++..++.
T Consensus 86 ~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 86 ALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 345555553 89999999999999999999999886543
No 77
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=94.83 E-value=0.29 Score=42.77 Aligned_cols=66 Identities=20% Similarity=0.120 Sum_probs=56.9
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 137 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 137 ~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
.-++++.+....++|.|+.+-.......+++|++++.++++.+++..|+++..+...|+.+....+
T Consensus 26 lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 26 LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 345566666677889998888888889999999999999999999999999999999998877653
No 78
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.02 E-value=0.2 Score=45.26 Aligned_cols=45 Identities=18% Similarity=0.343 Sum_probs=38.8
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCC
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLP 46 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~ 46 (256)
|+-+.++++|+++..+||||++..-.+|.++.++|..++......
T Consensus 96 LGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~ 140 (335)
T KOG2922|consen 96 LGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPK 140 (335)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCc
Confidence 456789999999999999999999999999999998776655433
No 79
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.59 E-value=3.3 Score=33.52 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHH
Q 025215 59 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNN 138 (256)
Q Consensus 59 ~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~ 138 (256)
+.++..+++-.+..+++..|-++.|.. .++..-....+..|+.+.+.... +.++........+.+||.|.. -
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~--~spl~As~isf~vGt~~L~~l~l---~~~~~~~~a~~~~~pwW~~~G---G 76 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYL--GSPLLASLISFLVGTVLLLILLL---IKQGHPGLAAVASAPWWAWIG---G 76 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHH---HhcCCCchhhccCCchHHHHc---c
Confidence 356677788888899999999987664 24555555556666654333222 234332222223345555542 1
Q ss_pred hhhhHHHHHHH----HHHHHHHHHHHhHHHHHHHHHHHHH-HhC---CcchHHHHHHHHHHHHHHHhhcC
Q 025215 139 AAQGILSSFFF----KYADTILKKYSSTVATIFTGLASAA-LFG---HTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 139 a~~g~~v~~v~----ky~~~i~k~~a~~~s~v~t~lls~~-lfg---e~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
.+|.+.+..-. |...+.+.....+-.++...++..+ +|| .+++...++|.++++.|+++...
T Consensus 77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 22222111111 1111111111111122333344333 343 56999999999999999776654
No 80
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=92.49 E-value=0.13 Score=45.44 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=39.8
Q ss_pred HHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 159 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 159 ~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
..+-.+++++++++.++++|++|..-.+|..+-+.|+.+..+|+
T Consensus 128 vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 128 VITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred EEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 34456899999999999999999999999999999999998875
No 81
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=91.97 E-value=4.8 Score=35.99 Aligned_cols=131 Identities=8% Similarity=0.010 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhc-CCchhHHHHHHHH
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQ-GHSKATMLLICNN 138 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~i~~~ 138 (256)
|+++.+.|-++|++.-.|.+-+-+. +....-.+=-+++.++.+..... .+..+ +..+ .-++..+......
T Consensus 8 Gil~~l~Ay~lwG~lp~y~kll~~~----~~~eIlahRviwS~~~~l~ll~~---~r~~~--~~~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 8 GILLALLAYLLWGLLPLYFKLLEPL----PATEILAHRVIWSFPFMLALLFL---LRQWR--ELKQLLKQPKTLLMLALT 78 (293)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccC----CHHHHHHHHHHHHHHHHHHHHHH---HhhhH--HHHHHHhCcHHHHHHHHH
Confidence 8999999999999999988766333 32222222234555543332221 22111 1111 1133333332222
Q ss_pred hh---hhHHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 139 AA---QGILSS-FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 139 a~---~g~~v~-~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
+. .++.+. +..+....+-.+..=.+.+.+..+++.++++|+++..|.+..++...|+..-.
T Consensus 79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~ 143 (293)
T COG2962 79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT 143 (293)
T ss_pred HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 21 122111 11111122223344456789999999999999999999999999999985433
No 82
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.65 E-value=0.16 Score=45.81 Aligned_cols=74 Identities=11% Similarity=0.089 Sum_probs=61.9
Q ss_pred chhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 128 SKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 128 ~~~~~~~i~~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
.+..|..++..++|-+.-...+-++..++-+--.+++++.+++++..+++|.+++.-++|+.+++.|.++-..+
T Consensus 64 ~~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 64 EPLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred hHHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 35567777888888776666666778887777778999999999999999999999999999999999776554
No 83
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=90.19 E-value=0.65 Score=35.12 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=38.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 152 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 152 ~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
.-.-+|..-..++.++-...|+++++|+++++++.|+++++.+++.-
T Consensus 60 s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 60 SLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred CHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 33455667777777777788899999999999999999999998653
No 84
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=90.14 E-value=4.2 Score=34.45 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=38.4
Q ss_pred CcchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCC
Q 025215 2 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS 44 (256)
Q Consensus 2 l~q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~ 44 (256)
.-|.+++++++..+.+.+||++..|+.+.++++.|++...+.+
T Consensus 10 ~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~ 52 (222)
T TIGR00803 10 FKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGD 52 (222)
T ss_pred HHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhH
Confidence 3578999999999999999999999999999999998776654
No 85
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=89.93 E-value=8.6 Score=35.27 Aligned_cols=135 Identities=11% Similarity=0.099 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHH
Q 025215 58 TGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFL--YGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI 135 (256)
Q Consensus 58 ~~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l--~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i 135 (256)
.+|+++..++.++++...+=.||+ |+ --.++.|+ ++++.++ +|........++ ..+.+...+..++...
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~-----WsWEs~Wlv~gi~swli-~P~~~a~l~ip~--~~~i~~~~~~~~l~~~ 76 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KG-----WSWESYWLVQGIFSWLI-VPWLWALLAIPD--FFSIYSATPASTLFWT 76 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CC-----ccHHHHHHHHHHHHHHH-HHHHHHHHhCCc--HHHHHHhCChhHHHHH
Confidence 469999999999999877777665 33 23455553 2333221 233221111111 1223333332222221
Q ss_pred ----HHHhhhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhC-------CcchHHHHHHHHHHHHHHHhhcCC
Q 025215 136 ----CNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFG-------HTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 136 ----~~~a~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfg-------e~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+.-.+||+..+..+||.. +.-.+.+.....++..++--++.| .+-....++|.+++++|+.+-.+.
T Consensus 77 ~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 77 FLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 344568898888899877 222233333333444444333322 333457899999999999888776
No 86
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=88.77 E-value=10 Score=34.30 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=61.8
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 132 MLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 132 ~~~i~~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
+..-+.+.+...+-.-.+||.+--+...+-+..++-+++.+.++.+.+.+....+-+++|-.|+-++...+
T Consensus 87 ~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~ 157 (327)
T KOG1581|consen 87 SLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFP 157 (327)
T ss_pred hHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEec
Confidence 33346677777777788999999899999999999999999999999999999999999999998887653
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=88.43 E-value=20 Score=32.98 Aligned_cols=71 Identities=13% Similarity=0.071 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHhCCCC---C----HHHHHHHHHHHHHHhHhcc----CCCCCCCCCCCCChhhhHHHHHHHHHHHHHH
Q 025215 5 LKVFVIALLLKIIMKRRF---S----IIQWEALALLLIGISVNQL----RSLPEGTSALGLPVATGAYLYTLIFVTVPSL 73 (256)
Q Consensus 5 ~kil~talls~l~Lk~rl---s----~~qw~al~l~~~Gv~iv~~----~~~~~~~~~~~~~~~~~G~l~~l~a~~~sal 73 (256)
+.++.++++..++++|-- + ..-..|++++++|+.+... ++..++....+-....-|+...+++.+.+++
T Consensus 109 l~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~ 188 (345)
T PRK13499 109 ITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSAC 188 (345)
T ss_pred HHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHH
Confidence 456778888888888532 3 3347788999999999887 4432211000111122489999999999988
Q ss_pred HH
Q 025215 74 AS 75 (256)
Q Consensus 74 a~ 75 (256)
.+
T Consensus 189 f~ 190 (345)
T PRK13499 189 FS 190 (345)
T ss_pred HH
Confidence 88
No 88
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=88.34 E-value=0.61 Score=34.39 Aligned_cols=29 Identities=17% Similarity=0.433 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQWEALALL 33 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~qw~al~l~ 33 (256)
+-.+.+++.+.+++||+++..||.++.++
T Consensus 65 ~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 65 LGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 45678999999999999999999998864
No 89
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.41 E-value=3 Score=31.20 Aligned_cols=49 Identities=14% Similarity=0.214 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 151 YADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 151 y~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
|..+-+|..-.-++..+-..+|+++++||+.+.++.|+.++..|++...
T Consensus 66 ~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 66 YSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 3344556666666666777899999999999999999999999997654
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=87.09 E-value=0.68 Score=35.65 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHh
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN 40 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv 40 (256)
-+..++|++.++++.+|..+++.|+|+.+.++|+.+.
T Consensus 76 sl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 76 SLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 4567899999988888888988999999999998754
No 91
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=87.09 E-value=1.6 Score=40.37 Aligned_cols=53 Identities=15% Similarity=0.113 Sum_probs=43.6
Q ss_pred HHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 025215 157 KKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEP 209 (256)
Q Consensus 157 k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~~~~~~~~ 209 (256)
.+..++.+-++|..++.++-+|++|+.++++.++.+.|+.+.+....++++..
T Consensus 188 ~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~ 240 (416)
T KOG2765|consen 188 TTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDL 240 (416)
T ss_pred hhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccC
Confidence 33445566689999999999999999999999999999999988766665544
No 92
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=84.02 E-value=11 Score=33.42 Aligned_cols=62 Identities=18% Similarity=0.079 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHH----HHHHHHHHHHHHhhcCCC
Q 025215 141 QGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNF----ILGISIVFISMHQFFSPL 202 (256)
Q Consensus 141 ~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~----~iG~~lVi~gv~ly~~~~ 202 (256)
|++.-...+|+.. +.+.+..+....+.+.+.++++|||--+..+ +++.+++++|+++-+..+
T Consensus 58 Gq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~ 124 (269)
T PF06800_consen 58 GQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD 124 (269)
T ss_pred HHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 4333333333333 4455666778889999999999999665443 446677889998877653
No 93
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=81.85 E-value=2.6 Score=36.75 Aligned_cols=39 Identities=15% Similarity=0.347 Sum_probs=33.5
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhcc
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL 42 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~ 42 (256)
-++=.||.+.|+++++..++.+||++-++.+.|...=..
T Consensus 275 TTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 275 TTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred ehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 356689999999999999999999999999998765433
No 94
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=78.44 E-value=2.3 Score=32.33 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=48.0
Q ss_pred HHHHHhhhhHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 134 LICNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 134 ~i~~~a~~g~~v~~v~ky~~-~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
..+.+-++.......+.+++ +....++++.+..++++.+..+-.|...-..++|..++.+|+++.
T Consensus 58 PFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 58 PFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 33445555555555444443 444567888899999999999888888889999999999998763
No 95
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=73.45 E-value=0.18 Score=43.98 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHhCCCCCHHH----HHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHH
Q 025215 5 LKVFVIALLLKIIMKRRFSIIQ----WEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEY 80 (256)
Q Consensus 5 ~kil~talls~l~Lk~rls~~q----w~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~ 80 (256)
++++-+.+++++.++|--+..| ..|+++++.|+.+..+++..+...+ +.+..--|+..++.+.+-.-.+.|..+.
T Consensus 95 ~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~-~~~n~kkgi~~L~iSt~GYv~yvvl~~~ 173 (288)
T COG4975 95 MQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE-NPSNLKKGIVILLISTLGYVGYVVLFQL 173 (288)
T ss_pred hhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc-ChHhhhhheeeeeeeccceeeeEeeecc
Confidence 5677888999999999888887 4688999999998888775332111 1111112555555455544444444433
Q ss_pred HhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 025215 81 ALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYS 160 (256)
Q Consensus 81 ~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~a~~g~~v~~v~ky~~~i~k~~a 160 (256)
.. -+.-.-+.-|.+-+...+.+++ ..+++ ..++.+.+.....=+.-++|++..-+. .. ....|
T Consensus 174 f~-v~g~saiLPqAiGMv~~ali~~--------~~~~~---~~~~K~t~~nii~G~~Wa~GNl~ml~a----~~-~~GvA 236 (288)
T COG4975 174 FD-VDGLSAILPQAIGMVIGALILG--------FFKME---KRFNKYTWLNIIPGLIWAIGNLFMLLA----AQ-KVGVA 236 (288)
T ss_pred cc-ccchhhhhHHHHHHHHHHHHHh--------hcccc---cchHHHHHHHHhhHHHHHhhHHHHHHh----hh-hhcee
Confidence 21 1100112222222211111110 12221 122222222111112334444432222 11 22233
Q ss_pred hH-----HHHHHHHHHHHHHhCCcchHHH----HHHHHHHHHHHHhh
Q 025215 161 ST-----VATIFTGLASAALFGHTLTMNF----ILGISIVFISMHQF 198 (256)
Q Consensus 161 ~~-----~s~v~t~lls~~lfge~lt~~~----~iG~~lVi~gv~ly 198 (256)
++ +..+++.+-++++++|+=|..+ ++|..+++.|..+-
T Consensus 237 t~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 237 TSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred eeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 32 4457888999999999877754 56777777776543
No 96
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=72.43 E-value=68 Score=28.26 Aligned_cols=125 Identities=6% Similarity=-0.059 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchh--HHHHH
Q 025215 58 TGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA--TMLLI 135 (256)
Q Consensus 58 ~~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~i 135 (256)
..|+.++++++++++..++..|..+.. .+++....+=++++.++.++... .... .+..-++. .+..+
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~---~~~~~~~~~R~~~a~l~l~~~~~----~~~~----~~~~~~~~~~~~~g~ 79 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPL---VGAPGVTALRLALGTLILIAIFK----PWRL----RFAKEQRLPLLFYGV 79 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHh----HHhc----cCCHHHHHHHHHHHH
Confidence 358999999999999999998887765 35444444434455443222211 1110 01000111 11111
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcC
Q 025215 136 CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 136 ~~~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~ 200 (256)
+ ......+..+..+|.+.-.........++++.+++ +|++.. ..+.++.+.|+++...
T Consensus 80 ~-~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~ 137 (293)
T PRK10532 80 S-LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLP 137 (293)
T ss_pred H-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeee
Confidence 1 22222333333455544443344445566665554 355543 4556677788876543
No 97
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.09 E-value=12 Score=28.14 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHh
Q 025215 9 VIALLLKIIMKRRFSIIQWEALALLLIGISVN 40 (256)
Q Consensus 9 ~talls~l~Lk~rls~~qw~al~l~~~Gv~iv 40 (256)
.-..+|.+.|||++++.+|.|-.++..|+..+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34568999999999999999988888887654
No 98
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=70.17 E-value=6.7 Score=29.74 Aligned_cols=31 Identities=13% Similarity=0.011 Sum_probs=25.6
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhH
Q 025215 9 VIALLLKIIMKRRFSIIQWEALALLLIGISV 39 (256)
Q Consensus 9 ~talls~l~Lk~rls~~qw~al~l~~~Gv~i 39 (256)
.-+.++.+++||++++.+..|-++++.++..
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 4467899999999999999998888777543
No 99
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=69.36 E-value=88 Score=28.29 Aligned_cols=64 Identities=22% Similarity=0.155 Sum_probs=44.3
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 138 NAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 138 ~a~~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
-..|..+...-+.+.++..--..-...++++.++|..+++.+++..+++|...|..|+.+....
T Consensus 96 Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 96 DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 3344444333343433332233334567899999999999999999999999999999776544
No 100
>PRK11715 inner membrane protein; Provisional
Probab=62.87 E-value=87 Score=29.88 Aligned_cols=56 Identities=21% Similarity=0.198 Sum_probs=42.7
Q ss_pred CCCCCHHHH--HHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025215 19 KRRFSIIQW--EALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 85 (256)
Q Consensus 19 k~rls~~qw--~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~ 85 (256)
|.|+.+.|+ .|+.+.+.=++++.++++-. .+..+++.|+.|.++-+.|...++|+.
T Consensus 326 ~~~iHpiQYlLVGlAl~lFYLLLLSlSEHig-----------F~~AYliAa~a~v~li~~Y~~~vl~~~ 383 (436)
T PRK11715 326 KLRIHPVQYLLVGLALVLFYLLLLSLSEHIG-----------FTLAYLIAALACVLLIGFYLSAVLRSW 383 (436)
T ss_pred CceecHHHHHHHHHHHHHHHHHHHHHHhhhc-----------hHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 579999995 45666666677778787632 256678888889999999999998874
No 101
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=61.48 E-value=88 Score=29.78 Aligned_cols=58 Identities=26% Similarity=0.229 Sum_probs=43.3
Q ss_pred HhCCCCCHHHHH--HHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025215 17 IMKRRFSIIQWE--ALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 85 (256)
Q Consensus 17 ~Lk~rls~~qw~--al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~ 85 (256)
+-|+|+.+.|++ |+.+.+.=++++.++++-. .+..+++.+..|.++-+.|...++|+.
T Consensus 318 ~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~-----------F~~AYliAa~a~i~Li~~Y~~~vl~~~ 377 (430)
T PF06123_consen 318 LSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIG-----------FNLAYLIAALACIGLISLYLSSVLKSW 377 (430)
T ss_pred HhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhc-----------hHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 346899999964 5556666677777777532 256677888888999999999999874
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=61.32 E-value=1.3e+02 Score=27.38 Aligned_cols=136 Identities=14% Similarity=0.105 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCC-CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcCCchhHHHHHHHH
Q 025215 60 AYLYTLIFVTVPSLASVFNEYALKSQYD-TSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNN 138 (256)
Q Consensus 60 G~l~~l~a~~~sala~V~~e~~lk~~~~-~s~~~~~~~l~~~g~i~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i~~~ 138 (256)
..+..+..|+.|.+..+.+|.++-.++. ..+...-.| ++.+++. ..... .-|--..+.++--....|..+-..
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q-~l~s~~~---v~~lk--~~~lv~~~~l~~~~~kk~~P~~~l 86 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQ-SLASVLV---VLVLK--RLGLVNFRPLDLRTAKKWFPVSLL 86 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH-HHHHHHH---HHHHH--HhceeecCCcChHHHHHHccHHHH
Confidence 4667788888899989999998877521 122222223 2333221 11110 111111111211123344443333
Q ss_pred hhhhHHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 139 AAQGILSS-FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 139 a~~g~~v~-~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
-.+.+..+ .-+||.+-=+-...-..+++++++....+|+-.++..........++|...+...
T Consensus 87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~ 150 (314)
T KOG1444|consen 87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT 150 (314)
T ss_pred HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc
Confidence 33333322 3356665333334445788999999999999999999999999988888887765
No 103
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=55.77 E-value=47 Score=30.56 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhc
Q 025215 141 QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 199 (256)
Q Consensus 141 ~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~ 199 (256)
.+-+......+.|+-+-....-..+.-|.++++++++++++..|+...++.+.|+.+-.
T Consensus 105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 33345555667887777777778999999999999999999999999999999997765
No 104
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=50.17 E-value=72 Score=21.05 Aligned_cols=45 Identities=13% Similarity=0.126 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025215 26 QWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 84 (256)
Q Consensus 26 qw~al~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~ 84 (256)
...+.++.++|+++..+++. |.+.++++-.+.|....+.++.++.
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp--------------G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP--------------GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC--------------cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 45778888999988887752 6666677777777767777666543
No 105
>PRK02237 hypothetical protein; Provisional
Probab=47.53 E-value=43 Score=25.55 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCC
Q 025215 7 VFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS 44 (256)
Q Consensus 7 il~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~ 44 (256)
|+.+-+-.+.+=|+|.++..|.+..+.++|+.++...+
T Consensus 70 I~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 70 VAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 45555667777889999999999999999998886654
No 106
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=44.27 E-value=17 Score=32.09 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=33.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhCCcchHHH-HH---HHHHHHHHHHhhcCC
Q 025215 155 ILKKYSSTVATIFTGLASAALFGHTLTMNF-IL---GISIVFISMHQFFSP 201 (256)
Q Consensus 155 i~k~~a~~~s~v~t~lls~~lfge~lt~~~-~i---G~~lVi~gv~ly~~~ 201 (256)
...+..+.+..+-+.+.+++.|||=.+..+ ++ ..++++.|.++-.+.
T Consensus 87 kamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~ 137 (288)
T COG4975 87 KAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQ 137 (288)
T ss_pred ccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeee
Confidence 344566677789999999999999777655 33 445666888776654
No 107
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=41.53 E-value=8.7 Score=34.49 Aligned_cols=9 Identities=67% Similarity=1.051 Sum_probs=0.0
Q ss_pred CCCCCCCCC
Q 025215 247 NEEKAPLLP 255 (256)
Q Consensus 247 ~~~~~~~~~ 255 (256)
.|||.||.|
T Consensus 215 keEkPPl~p 223 (290)
T PF05454_consen 215 KEEKPPLPP 223 (290)
T ss_dssp ---------
T ss_pred cccCCCCCC
Confidence 788888876
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.43 E-value=56 Score=24.85 Aligned_cols=39 Identities=15% Similarity=0.200 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCC
Q 025215 6 KVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS 44 (256)
Q Consensus 6 kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~ 44 (256)
-|+.+-+-.+.+=|+|..+..|.+..+.++|+.++.+.+
T Consensus 67 fI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 67 FIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 355666667777789999999999999999999887654
No 109
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=32.83 E-value=15 Score=33.02 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=0.0
Q ss_pred HHHHhCCCCCHH-HHHHHHHHHHHHhHh
Q 025215 14 LKIIMKRRFSII-QWEALALLLIGISVN 40 (256)
Q Consensus 14 s~l~Lk~rls~~-qw~al~l~~~Gv~iv 40 (256)
-.+++|||+-.. -.+|++++++-..++
T Consensus 68 IImlF~RrLLCPLGlLCiilimi~lLv~ 95 (381)
T PF05297_consen 68 IIMLFKRRLLCPLGLLCIILIMIVLLVS 95 (381)
T ss_dssp ----------------------------
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHH
Confidence 344455554433 355555555554443
No 110
>COG2855 Predicted membrane protein [Function unknown]
Probab=30.78 E-value=4.3e+02 Score=24.32 Aligned_cols=71 Identities=15% Similarity=-0.032 Sum_probs=33.9
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHHHhHhccCCCCC----CCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025215 14 LKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE----GTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 85 (256)
Q Consensus 14 s~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~~~~----~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~ 85 (256)
+..+++-|+|..|..++....+++........-- -....+.+.. ...+.-..++.|.+-+-.-.|-..|.+
T Consensus 75 gIvLlG~~ltl~~i~~~G~~~v~~~~~~l~~t~~~~~~lg~~lgld~~-~a~Lia~GssICGasAiaA~~pvika~ 149 (334)
T COG2855 75 GIVLLGFRLTLSDIADVGGSGVLIIAITLSSTFLFAYFLGKLLGLDKK-LALLIAAGSSICGASAIAATAPVIKAE 149 (334)
T ss_pred HHHHHcceeeHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHccchhhHHHHHHHhCCcCCCC
Confidence 4556677777777665544433332222111000 0011233332 244555555566666666667776654
No 111
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=30.08 E-value=41 Score=23.31 Aligned_cols=21 Identities=10% Similarity=-0.002 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 025215 182 MNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 182 ~~~~iG~~lVi~gv~ly~~~~ 202 (256)
-..+++.|++++|..+|.-..
T Consensus 4 d~iLi~ICVaii~lIlY~iYn 24 (68)
T PF05961_consen 4 DFILIIICVAIIGLILYGIYN 24 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 356789999999999998663
No 112
>PF11022 DUF2611: Protein of unknown function (DUF2611); InterPro: IPR021278 This family is conserved in the Dikarya of Fungi. The function is not known.
Probab=29.97 E-value=23 Score=24.86 Aligned_cols=25 Identities=8% Similarity=0.214 Sum_probs=12.0
Q ss_pred HHhCCcchHHH-HHHHHHHHHHHHhh
Q 025215 174 ALFGHTLTMNF-ILGISIVFISMHQF 198 (256)
Q Consensus 174 ~lfge~lt~~~-~iG~~lVi~gv~ly 198 (256)
-+||.++...+ .+|.+-.+++...|
T Consensus 6 ~I~Gr~V~~H~LAi~tLg~~~~~~~~ 31 (71)
T PF11022_consen 6 TIFGRQVQSHYLAIATLGTVFGGVYL 31 (71)
T ss_pred eecccccccchhHHHHHHHHHHHhee
Confidence 35565544433 44555555444333
No 113
>PF15471 TMEM171: Transmembrane protein family 171
Probab=29.79 E-value=68 Score=28.55 Aligned_cols=28 Identities=21% Similarity=0.289 Sum_probs=20.7
Q ss_pred chHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 025215 180 LTMNFILGISIVFISMHQFFSPLSKVKD 207 (256)
Q Consensus 180 lt~~~~iG~~lVi~gv~ly~~~~~~~~~ 207 (256)
+-..|++|-++|+.|.+.|.-.-.|.|+
T Consensus 159 FLslQImGPlIVl~GLCFFVVAHvKKr~ 186 (319)
T PF15471_consen 159 FLSLQIMGPLIVLVGLCFFVVAHVKKRN 186 (319)
T ss_pred eeehhhhhhHHHHHhhhhhheeeeeecc
Confidence 3357899999999999888765444443
No 114
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=29.20 E-value=5e+02 Score=24.58 Aligned_cols=57 Identities=16% Similarity=0.299 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHhCCcchH--HHHHHHHHHHHHHHhhc
Q 025215 143 ILSSFFFKYADTILKKYSS--TVATIFTGLASAALFGHTLTM--NFILGISIVFISMHQFF 199 (256)
Q Consensus 143 ~~v~~v~ky~~~i~k~~a~--~~s~v~t~lls~~lfge~lt~--~~~iG~~lVi~gv~ly~ 199 (256)
....+--||..+++.+-+. .+..++.++.-+.+-+++-+. .+.++.+++++.+.+|.
T Consensus 141 ~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 141 LAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILLLCFVLYL 201 (406)
T ss_pred hhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHHHHHHHH
Confidence 3333447788877754333 222233333444444555333 56777778888988888
No 115
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=28.75 E-value=5.1e+02 Score=24.58 Aligned_cols=21 Identities=29% Similarity=0.395 Sum_probs=15.1
Q ss_pred chHHHHHHHHHHHHHHHhhcCC
Q 025215 180 LTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 180 lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
-+...++|.++.++++ +|...
T Consensus 283 ~~~~~iig~i~~~~~v-~yss~ 303 (429)
T PF03348_consen 283 NTWQSIIGLIFTFVSV-LYSSF 303 (429)
T ss_pred chHHHHHHHHHHHHHH-HHhcc
Confidence 4566788888888877 66554
No 116
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=27.22 E-value=70 Score=28.78 Aligned_cols=40 Identities=8% Similarity=0.006 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCCC
Q 025215 163 VATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL 202 (256)
Q Consensus 163 ~s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~~ 202 (256)
-+++.++++++++.|.+-+..|.....++-+|+.+.+..+
T Consensus 100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s 139 (330)
T KOG1583|consen 100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFS 139 (330)
T ss_pred CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeec
Confidence 4567899999999999999999999999999999988764
No 117
>PRK14778 lipoprotein signal peptidase; Provisional
Probab=26.62 E-value=3.8e+02 Score=22.40 Aligned_cols=19 Identities=11% Similarity=0.181 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 025215 182 MNFILGISIVFISMHQFFS 200 (256)
Q Consensus 182 ~~~~iG~~lVi~gv~ly~~ 200 (256)
....+|.+++++..+....
T Consensus 121 i~I~iGv~llll~~~~~~~ 139 (186)
T PRK14778 121 VFIIVGGALMILGVFRGGD 139 (186)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 3557787777777654333
No 118
>PRK14796 lipoprotein signal peptidase; Provisional
Probab=25.78 E-value=3.3e+02 Score=22.02 Aligned_cols=56 Identities=20% Similarity=0.042 Sum_probs=30.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhccCCCCCCC---------CCCCCChhhhHHHHHHHHHHHHHHHHH
Q 025215 21 RFSIIQWEALALLLIGISVNQLRSLPEGT---------SALGLPVATGAYLYTLIFVTVPSLASV 76 (256)
Q Consensus 21 rls~~qw~al~l~~~Gv~iv~~~~~~~~~---------~~~~~~~~~~G~l~~l~a~~~sala~V 76 (256)
+-++.+..++.+++.|.+=...+-...+. .....|...+++.++.+++++-.+...
T Consensus 88 ~~~~~~~~~l~li~gGalGNliDR~~~G~VvDfi~~~~~~~~~pvFNvAD~~I~iGv~ll~~~~~ 152 (161)
T PRK14796 88 STTRLAAIALGLIIGGAIGNAIDRLAYGAVFDFVLLHAGTYSWYVFNLADAAIVAGVAGLLYDSL 152 (161)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHhhcCceEEEEEEccCCCCCceeeHHHHHHHHHHHHHHHHHH
Confidence 34666667888888887755443321110 011233333577777777666555443
No 119
>PRK02935 hypothetical protein; Provisional
Probab=25.17 E-value=2.7e+02 Score=21.14 Aligned_cols=22 Identities=27% Similarity=0.390 Sum_probs=18.4
Q ss_pred chHHHHHHHHHHHHHHHhhcCC
Q 025215 180 LTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 180 lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
.+...++|...++.++.+|.+.
T Consensus 40 m~ifm~~G~l~~l~S~vvYFwi 61 (110)
T PRK02935 40 MTIFMLLGFLAVIASTVVYFWI 61 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5567789999999999999875
No 120
>COG4720 Predicted membrane protein [Function unknown]
Probab=24.91 E-value=2.3e+02 Score=23.60 Aligned_cols=30 Identities=17% Similarity=0.307 Sum_probs=21.1
Q ss_pred hhcCCchhHHHHHHHHhhhhHHHHHHHHHH
Q 025215 123 ILQGHSKATMLLICNNAAQGILSSFFFKYA 152 (256)
Q Consensus 123 ~~~g~~~~~~~~i~~~a~~g~~v~~v~ky~ 152 (256)
.+.||+.|++..++.....|.+.+++.|+.
T Consensus 69 ll~gy~~W~~~tlv~~G~~g~i~g~~~k~~ 98 (177)
T COG4720 69 LLSGYPSWMFFTLVIHGLIGLIAGLFGKRE 98 (177)
T ss_pred HhcCCccHHHHHHHHhchhhhhhhhhhhhh
Confidence 556676666666677777788888876655
No 121
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=24.18 E-value=1.3e+02 Score=27.52 Aligned_cols=38 Identities=34% Similarity=0.569 Sum_probs=34.4
Q ss_pred chHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhc
Q 025215 4 NLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ 41 (256)
Q Consensus 4 q~kil~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~ 41 (256)
-.|-+-|-+++..+++++++-..|.++.+...|+.+-.
T Consensus 277 I~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 277 IVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 46778899999999999999999999999999998873
No 122
>PHA03049 IMV membrane protein; Provisional
Probab=24.15 E-value=93 Score=21.52 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 025215 182 MNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 182 ~~~~iG~~lVi~gv~ly~~~ 201 (256)
-..+++.|++++|..+|.-.
T Consensus 4 d~~l~iICVaIi~lIvYgiY 23 (68)
T PHA03049 4 DIILVIICVVIIGLIVYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999988765
No 123
>PRK00376 lspA lipoprotein signal peptidase; Reviewed
Probab=23.22 E-value=3.4e+02 Score=21.87 Aligned_cols=57 Identities=23% Similarity=0.117 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHHHHHHHhHhccCCCCCCC---------CCCCCChhhhHHHHHHHHHHHHHHHHH
Q 025215 20 RRFSIIQWEALALLLIGISVNQLRSLPEGT---------SALGLPVATGAYLYTLIFVTVPSLASV 76 (256)
Q Consensus 20 ~rls~~qw~al~l~~~Gv~iv~~~~~~~~~---------~~~~~~~~~~G~l~~l~a~~~sala~V 76 (256)
++.++.+-.++.+++.|.+-...+-...+. .....|...+++.++.+++++-.+...
T Consensus 90 ~~~~~~~~~~l~li~gGaiGNliDR~~~G~VvDfi~~~~~~~~~pvFNvAD~~I~~G~~lll~~~~ 155 (160)
T PRK00376 90 KALQKLNNIAYALILGGALGNLIDRLVHGFVVDFIDFYWGNWHFPAFNLADSAICIGAVLLILDSF 155 (160)
T ss_pred cccchHHHHHHHHHHHHHHHhHHHHhhcCCeeEEEEecccCCCCceEEHHHHHHHHHHHHHHHHHH
Confidence 455666667888888887765544321110 011233333577777777666555443
No 124
>PRK12324 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Provisional
Probab=23.13 E-value=5.5e+02 Score=23.00 Aligned_cols=47 Identities=17% Similarity=0.259 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCcchHHHHHHH
Q 025215 141 QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGI 188 (256)
Q Consensus 141 ~g~~v~~v~ky~~~i~k~~a~~~s~v~t~lls~~lfge~lt~~~~iG~ 188 (256)
.....++.+|.. .+.-.+..+..-.+..+.+....+-+++.+.++..
T Consensus 127 ~~~~Ys~~lK~~-~~~d~l~va~~~~lr~~~G~~a~~~~~s~wll~~~ 173 (295)
T PRK12324 127 LNLAYSFKLKHQ-PVLDVFCIASGFVLRAIAGGVAIGVPLSPWLLLCT 173 (295)
T ss_pred HHHHhhHHhcCC-chhhHHHHHHHHHHHHHHHHHHhCCCccHHHHHHH
Confidence 344455545532 22223333444455666777777888887776543
No 125
>COG4711 Predicted membrane protein [Function unknown]
Probab=23.07 E-value=4.5e+02 Score=22.49 Aligned_cols=24 Identities=25% Similarity=0.267 Sum_probs=13.9
Q ss_pred HhCCCCCHHHHHHHHHHHHHHhHh
Q 025215 17 IMKRRFSIIQWEALALLLIGISVN 40 (256)
Q Consensus 17 ~Lk~rls~~qw~al~l~~~Gv~iv 40 (256)
++-.|+++.+-+++++.+++++..
T Consensus 116 llA~~isp~h~lal~~~~l~I~y~ 139 (217)
T COG4711 116 LLAYRISPYHSLALVLVVLVIMYS 139 (217)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHH
Confidence 444566666666666666655543
No 126
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. Spore germination protein (amino acid permease) is involved in the response to the germinative mixture of L-asparagine, glucose, fructose and potassium ions (AFFK). These proteins could be amino acid transporters.; GO: 0009847 spore germination, 0016021 integral to membrane
Probab=22.79 E-value=4e+02 Score=23.59 Aligned_cols=64 Identities=22% Similarity=0.175 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHH-HHHhHhccCCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCChh
Q 025215 21 RFSIIQWEALALLL-IGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIY 91 (256)
Q Consensus 21 rls~~qw~al~l~~-~Gv~iv~~~~~~~~~~~~~~~~~~~G~l~~l~a~~~sala~V~~e~~lk~~~~~s~~ 91 (256)
|+|.+|...++... .|..+...+...... . + + |.+..+++..+..+.....-++.|+.++.++.
T Consensus 1 kIS~~Q~~~l~~~~~~g~~~l~~p~~l~~~-~-~--d---~Wi~~ll~~~~~l~~~~l~~~l~~~~p~~~l~ 65 (320)
T PF03845_consen 1 KISPRQLFFLLISSIIGTGILFLPAILAEQ-A-G--D---AWISVLLGGLIGLLLALLIYYLLKRFPGKTLV 65 (320)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-c-C--C---cHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 68999988888755 666666655431111 0 1 1 34455555555555555566666765455543
No 127
>PF04304 DUF454: Protein of unknown function (DUF454); InterPro: IPR007401 This is a predicted membrane protein.
Probab=22.68 E-value=2.5e+02 Score=18.96 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhh
Q 025215 164 ATIFTGLASAALFGHTLTMNFILGISIVFISMHQF 198 (256)
Q Consensus 164 s~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly 198 (256)
.+..+...+.+++.+++-...+++++.+....|+.
T Consensus 35 ~m~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~i~ 69 (71)
T PF04304_consen 35 MMWLSMGISAFFFVPNLWVRIVLAAILLIVAIYIL 69 (71)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHhe
Confidence 33444455556666665666666666655555543
No 128
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=22.55 E-value=5e+02 Score=25.16 Aligned_cols=18 Identities=17% Similarity=0.388 Sum_probs=13.5
Q ss_pred HhCCcchHHHHHHHHHHH
Q 025215 175 LFGHTLTMNFILGISIVF 192 (256)
Q Consensus 175 lfge~lt~~~~iG~~lVi 192 (256)
++|++-.|..+++..++.
T Consensus 176 ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 176 LLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred hcCCCcchHHHHHHHHHH
Confidence 678888887777776664
No 129
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=22.12 E-value=13 Score=33.62 Aligned_cols=15 Identities=13% Similarity=0.301 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHh
Q 025215 183 NFILGISIVFISMHQ 197 (256)
Q Consensus 183 ~~~iG~~lVi~gv~l 197 (256)
..+.|.+++++++.+
T Consensus 129 iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 129 ILFPGVACFLIAIIL 143 (336)
T ss_pred EEEccHHHHHHHHHH
Confidence 445566666666543
No 130
>TIGR00077 lspA lipoprotein signal peptidase. Alternate name: lipoprotein signal peptidase
Probab=22.08 E-value=4.3e+02 Score=21.43 Aligned_cols=57 Identities=21% Similarity=0.090 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHHHHHHhHhccCCCCCCC---------CCCCCChhhhHHHHHHHHHHHHHHHHH
Q 025215 20 RRFSIIQWEALALLLIGISVNQLRSLPEGT---------SALGLPVATGAYLYTLIFVTVPSLASV 76 (256)
Q Consensus 20 ~rls~~qw~al~l~~~Gv~iv~~~~~~~~~---------~~~~~~~~~~G~l~~l~a~~~sala~V 76 (256)
++.++.+..++.+++.|.+=...+-...+. .....|...+++.++.+++++--+...
T Consensus 92 ~~~~~~~~~~l~lIlgGalGNliDR~~~G~VvDfi~~~~~~~~~pvFNvAD~~I~iGv~lll~~~~ 157 (166)
T TIGR00077 92 KELFKITNIAFGLIFGGALGNFIDRLVRGGVVDFFDFYFGNYHFPIFNFADSSICIGVILLLLYFF 157 (166)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhcCceEEEEEeecCCCCCceeEHHHHHHHHHHHHHHHHHH
Confidence 455666667888888887655443321110 011233333577777777665555444
No 131
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=21.93 E-value=3.6e+02 Score=20.49 Aligned_cols=63 Identities=13% Similarity=0.038 Sum_probs=41.2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhhcCC
Q 025215 136 CNNAAQGILSSFFFKYADTILKKYSSTVA--TIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 201 (256)
Q Consensus 136 ~~~a~~g~~v~~v~ky~~~i~k~~a~~~s--~v~t~lls~~lfge~lt~~~~iG~~lVi~gv~ly~~~ 201 (256)
+..+..+++... +.++--|.++..=. ++.+.+-...+.+++|+..-++|.++++.|+.+....
T Consensus 40 ~~L~lfg~l~Tl---~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 40 LSLALFGWLLTL---QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHHHHHHhhc---CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 334444444443 33444455555333 3455566677779999999999999999999766543
No 132
>PRK03427 cell division protein ZipA; Provisional
Probab=21.44 E-value=2.1e+02 Score=26.31 Aligned_cols=28 Identities=18% Similarity=0.118 Sum_probs=17.9
Q ss_pred chHHHHHHHHHHHHHHHhhcC-CCCCCCC
Q 025215 180 LTMNFILGISIVFISMHQFFS-PLSKVKD 207 (256)
Q Consensus 180 lt~~~~iG~~lVi~gv~ly~~-~~~~~~~ 207 (256)
+-+..++-++|.|++++++.. .++|+|.
T Consensus 5 LrLiLivvGAIAIiAlL~HGlWtsRKers 33 (333)
T PRK03427 5 LRLILIIVGAIAIIALLVHGFWTSRKERS 33 (333)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 445566677788888888863 3345443
No 133
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=20.99 E-value=1.3e+02 Score=22.85 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhHhccCC
Q 025215 7 VFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS 44 (256)
Q Consensus 7 il~talls~l~Lk~rls~~qw~al~l~~~Gv~iv~~~~ 44 (256)
|+.+-+-.++.=|.|..+..|.+-.+.++|+.++...+
T Consensus 69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 44455555666678999999999999999988876654
No 134
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=20.99 E-value=3.2e+02 Score=21.00 Aligned_cols=23 Identities=30% Similarity=0.440 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcc
Q 025215 20 RRFSIIQWEALALLLIGISVNQL 42 (256)
Q Consensus 20 ~rls~~qw~al~l~~~Gv~iv~~ 42 (256)
-|+++.+-.|+.+.++|+.+...
T Consensus 6 ~KiN~~R~~al~lif~g~~vmy~ 28 (114)
T PF11023_consen 6 SKINKIRTFALSLIFIGMIVMYI 28 (114)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Confidence 47788899999999999877654
No 135
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.40 E-value=7.8e+02 Score=23.71 Aligned_cols=21 Identities=5% Similarity=0.025 Sum_probs=17.8
Q ss_pred chHHHHHHHHHHHHHHHhhcC
Q 025215 180 LTMNFILGISIVFISMHQFFS 200 (256)
Q Consensus 180 lt~~~~iG~~lVi~gv~ly~~ 200 (256)
++..|+++..++++|++++..
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~ 274 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIIL 274 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999866644
No 136
>PF06502 Equine_IAV_S2: Equine infectious anaemia virus S2 protein; InterPro: IPR009480 This family consists of several equine infectious anaemia virus S2 proteins. The function of this family is unknown.
Probab=20.27 E-value=53 Score=22.38 Aligned_cols=15 Identities=53% Similarity=0.733 Sum_probs=11.4
Q ss_pred cCCccc--CCCCCCCCC
Q 025215 241 ASHRAV--NEEKAPLLP 255 (256)
Q Consensus 241 ~~~~~~--~~~~~~~~~ 255 (256)
+.|-+| .-|++|+||
T Consensus 12 a~HSmG~sqGesqpLlP 28 (67)
T PF06502_consen 12 ASHSMGVSQGESQPLLP 28 (67)
T ss_pred eccccccccccccccCC
Confidence 456655 778999998
No 137
>KOG1631 consensus Translocon-associated complex TRAP, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.24 E-value=87 Score=27.17 Aligned_cols=42 Identities=14% Similarity=-0.022 Sum_probs=23.9
Q ss_pred hCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCccccc
Q 025215 176 FGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESV 217 (256)
Q Consensus 176 fge~lt~~~~iG~~lVi~gv~ly~~~~~~~~~~~~~~~~~~~ 217 (256)
-||..=+..++-+.+++..++.++.-++..|+.++..++|+.
T Consensus 181 ~GETvFL~~lligl~llllv~~~q~L~~~sKk~~~~~kVE~G 222 (261)
T KOG1631|consen 181 SGETVFLYILLIGLSLLLLVLSQQFLSKLSKKTKKRRKVEVG 222 (261)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccceEeec
Confidence 356655555555566666666666543333555556666644
Done!