BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025223
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48620|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum
GN=FAD7 PE=2 SV=1
Length = 447
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/242 (70%), Positives = 186/242 (76%), Gaps = 23/242 (9%)
Query: 1 MASWVLSECGLKPLPHIFPRPRTG-----INPSKARFLHSKKSITDLKLPSVKC-SGDFS 54
MASWVLSECGL+PLP ++P+PRTG NP+K RF S TDL S C S
Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRF-----SRTDLGNGSSFCLSSGIL 55
Query: 55 RDRNWGLKVSAPLRVAPLEGEDEEERINGV-NGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
R++NW L+VSAPLRV +E E+E + V NG G EFDPGAPPPFKL+D
Sbjct: 56 REKNWALRVSAPLRVLQVEEEEENKEGERVING-----------GEEFDPGAPPPFKLSD 104
Query: 114 IRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFV 173
IR AIPKHCWVKDPW+SM YVVRDV VVFGLAA AAY NNWVVWPLYW AQ TMFWALFV
Sbjct: 105 IREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFV 164
Query: 174 LGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSN 233
LGHDCGHGSFSND KLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+S
Sbjct: 165 LGHDCGHGSFSNDPKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE 224
Query: 234 SL 235
+
Sbjct: 225 KI 226
>sp|P48619|FAD3C_RICCO Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis
GN=FAD7A-1 PE=2 SV=1
Length = 460
Score = 317 bits (813), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/239 (68%), Positives = 181/239 (75%), Gaps = 10/239 (4%)
Query: 2 ASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLK----LPSVKCSG-DFSRD 56
A WVLSECGL+PLP I+ RPR G SK L + + D K S K S S+
Sbjct: 3 AGWVLSECGLRPLPRIYSRPRIGFT-SKTTNLLKLRELPDSKSYNLCSSFKVSSWSNSKQ 61
Query: 57 RNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
NW L V+ P+ V+ + GED+ ER NGI N V+E +G FD GAPPPF LADIRA
Sbjct: 62 SNWALNVAVPVNVSTVSGEDDRER-EEFNGIVN---VDEGKGEFFDAGAPPPFTLADIRA 117
Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 176
AIPKHCWVK+PW+SMSYV+RDVVVVFGLAA AAY NNWV WPLYW QGTMFWALFVLGH
Sbjct: 118 AIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGH 177
Query: 177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
DCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+S +
Sbjct: 178 DCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI 236
>sp|P48621|FAD3C_SOYBN Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7
PE=2 SV=1
Length = 453
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/238 (70%), Positives = 191/238 (80%), Gaps = 11/238 (4%)
Query: 1 MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSITDLKLPSVKCSGDFSRDR 57
MA+W +CGLKPL + PRPRTG + S+ FL + K + K ++C+ R+R
Sbjct: 1 MATWYHQKCGLKPLAPVIPRPRTGAALSSTSRVEFLDTNKVVAGPKFQPLRCN---LRER 57
Query: 58 NWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAA 117
NWGLKVSAPLRVA +E +E++ ++ NG GVE E+ EFDPGAPPPF LADIRAA
Sbjct: 58 NWGLKVSAPLRVASIE--EEQKSVDLTNG---TNGVEHEKLPEFDPGAPPPFNLADIRAA 112
Query: 118 IPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHD 177
IPKHCWVKDPW+SMSYVVRDV+ VFGLAAAAAYLNNW+VWPLYWAAQGTMFWALFVLGHD
Sbjct: 113 IPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHD 172
Query: 178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
CGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQ+HGH ENDESWHP+ L
Sbjct: 173 CGHGSFSNNSKLNSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKL 230
>sp|P46310|FAD3C_ARATH Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis
thaliana GN=FAD7 PE=1 SV=1
Length = 446
Score = 299 bits (765), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/238 (64%), Positives = 170/238 (71%), Gaps = 19/238 (7%)
Query: 1 MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRD---R 57
MA+ VLSECG++PLP I+ PR+ + +F S S + S G SRD R
Sbjct: 1 MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPLSFGLNSRDGFTR 60
Query: 58 NWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAA 117
NW L VS PL E +EE+ FDPGAPPPF LADIRAA
Sbjct: 61 NWALNVSTPLTTPIFE----------------ESPLEEDNKQRFDPGAPPPFNLADIRAA 104
Query: 118 IPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHD 177
IPKHCWVK+PWKS+SYVVRDV +VF LAA AAYLNNW+VWPLYW AQGTMFWALFVLGHD
Sbjct: 105 IPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHD 164
Query: 178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
CGHGSFSND KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+S +
Sbjct: 165 CGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKI 222
>sp|P48622|FAD3D_ARATH Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic
OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1
Length = 435
Score = 293 bits (749), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/240 (63%), Positives = 169/240 (70%), Gaps = 30/240 (12%)
Query: 1 MASWVLSECGLKPLPHIFPRPRTGI--NPSKARFLHSKKSITDLKLPSVKCS---GDFSR 55
MAS VLSECG +PLP +P+ T NP K F K LK PS + G +S+
Sbjct: 1 MASSVLSECGFRPLPRFYPKHTTSFASNP-KPTF----KFNPPLKPPSSLLNSRYGFYSK 55
Query: 56 DRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIR 115
RNW L V+ PL E++ ER FDPGAPPPF LADIR
Sbjct: 56 TRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIR 95
Query: 116 AAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLG 175
AAIPKHCWVK+PW SMSYVVRDV +VFGLAA AAY NNW++WPLYW AQGTMFWALFVLG
Sbjct: 96 AAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLG 155
Query: 176 HDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
HDCGHGSFSND +LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+ S+
Sbjct: 156 HDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESI 215
>sp|P48618|FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica
napus GN=FAD7 PE=2 SV=1
Length = 404
Score = 269 bits (688), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 140/179 (78%), Gaps = 15/179 (8%)
Query: 57 RNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
RNW L V+ PL V EE E + FDPGAPPPF LADIRA
Sbjct: 17 RNWALNVTTPLTVDSSSSPPIEE---------------EPKTQRFDPGAPPPFNLADIRA 61
Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 176
AIPKHCWVK+PWKSMSYVVR++ +VF LAA AAYLNNW+VWPLYW AQGTMFWALFVLGH
Sbjct: 62 AIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGH 121
Query: 177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
DCGHGSFSND +LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+S +
Sbjct: 122 DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKI 180
>sp|P32291|FAD3E_VIGRR Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Vigna
radiata var. radiata GN=ARG1 PE=2 SV=1
Length = 380
Score = 228 bits (580), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/144 (73%), Positives = 119/144 (82%)
Query: 92 GVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYL 151
G E + S FDPGAPPPFK+ADIRAAIPKHCW K +S+SYV+RDV+VV LAA+A
Sbjct: 13 GAREGDQSYFDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISF 72
Query: 152 NNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRIS 211
N+W WPLYW AQGTMFWALFVLGHDCGHGSFSN KLNS VGH+LHS ILVPY+GWRIS
Sbjct: 73 NSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRIS 132
Query: 212 HRTHHQNHGHVENDESWHPVSNSL 235
HRTHHQNHGHVE DESW P++ +
Sbjct: 133 HRTHHQNHGHVEKDESWVPLTEKV 156
>sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana
tabacum GN=FAD3 PE=2 SV=1
Length = 379
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 122/153 (79%), Gaps = 1/153 (0%)
Query: 83 GVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVF 142
G++ I + E E EFDP APPPF+LA+IR IPKHCWVKDP +S+SYVVRDV+ V
Sbjct: 5 GISEIYDKNSFNEME-FEFDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVA 63
Query: 143 GLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSIL 202
L A +L++W+ +PLYWA QGTMFWA+FVLGHDCGHGSFS+ LN+VVGH+LHS+IL
Sbjct: 64 TLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAIL 123
Query: 203 VPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
VPYHGWRISH+THHQNHG+VE DESW P+ L
Sbjct: 124 VPYHGWRISHKTHHQNHGNVETDESWVPMPEKL 156
>sp|P48624|FAD3E_BRANA Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica
napus GN=FAD3 PE=2 SV=1
Length = 383
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/160 (67%), Positives = 123/160 (76%), Gaps = 8/160 (5%)
Query: 76 DEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVV 135
D+ +NG + G +EEG FDP A PPFK+ DIRAAIPKHCWVK P +SMSYV
Sbjct: 6 DQRSNVNG------DSGARKEEG--FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVT 57
Query: 136 RDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGH 195
RD+ V LA AA Y ++W +WPLYW AQGT+FWA+FVLGHDCGHGSFS+ LNSVVGH
Sbjct: 58 RDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGH 117
Query: 196 LLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSL 235
+LHS ILVPYHGWRISHRTHHQNHGHVENDESW P+ L
Sbjct: 118 ILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKL 157
>sp|P48623|FAD3E_ARATH Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis
thaliana GN=FAD3 PE=2 SV=1
Length = 386
Score = 216 bits (550), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/156 (69%), Positives = 125/156 (80%), Gaps = 5/156 (3%)
Query: 76 DEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVV 135
D+ +NG G G+ K E FDP A PPFK+ DIRAAIPKHCWVK P +SMSYVV
Sbjct: 6 DQRTNVNGDPGAGDRKKEER-----FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVV 60
Query: 136 RDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGH 195
RD++ V LA AA Y+++W +WPLYWAAQGT+FWA+FVLGHDCGHGSFS+ LNSVVGH
Sbjct: 61 RDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGH 120
Query: 196 LLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 231
+LHS ILVPYHGWRISHRTHHQNHGHVENDESW P+
Sbjct: 121 ILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPL 156
>sp|P48625|FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max
GN=FAD3 PE=2 SV=1
Length = 380
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 123/148 (83%)
Query: 88 GNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAA 147
NN ++ +FDP APPPFK+A+IRA+IPKHCWVK+PW+S+SYV+RDV+V+ L AA
Sbjct: 12 ANNGYQQKGSSFDFDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAA 71
Query: 148 AAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHG 207
A + +NW++W +Y QGTMFWALFVLGHDCGHGSFS+ LNS+VGH+LHSSILVPYHG
Sbjct: 72 AIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHG 131
Query: 208 WRISHRTHHQNHGHVENDESWHPVSNSL 235
WRISHRTHHQNHGH+E DESW P++ +
Sbjct: 132 WRISHRTHHQNHGHIEKDESWVPLTEKI 159
>sp|P46313|FAD6E_ARATH Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis
thaliana GN=FAD2 PE=2 SV=1
Length = 383
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 94 EEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAA-YLN 152
E + ++ P PPF + D++ AIP HC+ + +S SY++ D+++ A Y +
Sbjct: 16 SETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFS 75
Query: 153 ------NWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYH 206
+++ WPLYWA QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY
Sbjct: 76 LLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYF 135
Query: 207 GWRISHRTHHQNHGHVENDESWHPVSNSLCLW---YLCSDLCCITLFSVLFIL 256
W+ SHR HH N G +E DE + P S W YL + L I + +V F+L
Sbjct: 136 SWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVL 188
>sp|P48630|FD6E1_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1
OS=Glycine max GN=FAD2-1 PE=2 SV=1
Length = 387
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 78 EERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRD 137
+E G G V+ ++ P PPF + ++ AIP HC+ + S SYVV D
Sbjct: 5 KETTMGGRGRVAKVEVQGKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYD 64
Query: 138 VVVVFGLAAAAAYLN------NWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNS 191
+ F A Y + + + WP+YW QG + ++V+ H+CGH +FS ++
Sbjct: 65 LSFAFIFYIATTYFHLLPQPFSLIAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDD 124
Query: 192 VVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNSLCLWY 239
VVG LHS++LVPY W+ISHR HH N G ++ DE + P S W+
Sbjct: 125 VVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWF 172
>sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2
OS=Glycine max GN=FAD2-2 PE=2 SV=1
Length = 383
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 103 PGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPL--- 159
P P F L+ I+ AIP HC+ + +S SYVV D+ + F L A + + + PL
Sbjct: 25 PFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPLSFR 84
Query: 160 ----YWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTH 215
YWA QG + ++V+ H+CGH +FS+ L+ +VG +LHS++LVPY W+ SHR H
Sbjct: 85 GMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRH 144
Query: 216 HQNHGHVENDESWHPVSNSLCLWY 239
H N G +E DE + P S WY
Sbjct: 145 HSNTGSLERDEVFVPKQKSCIKWY 168
>sp|Q39287|FAD6E_BRAJU Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica
juncea PE=2 SV=1
Length = 384
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 103 PGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLA-AAAAYLN------NWV 155
P PPF + +++ AIP HC+ + +S SY++ D++V A Y ++V
Sbjct: 25 PCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPLSYV 84
Query: 156 VWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTH 215
WPLYWA QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY W+ SHR H
Sbjct: 85 AWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 144
Query: 216 HQNHGHVENDESWHPVSNSLCLW---YLCSDLCCITLFSVLFIL 256
H N G +E DE + P S W YL + L + +V F L
Sbjct: 145 HSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTL 188
>sp|O81931|FAD12_CREAL Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2
Length = 375
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 16/164 (9%)
Query: 88 GNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFG---- 143
G +G ++ PPF ++D++ AIP HC+ + +S Y+V D ++ +
Sbjct: 3 GGGRGRTSQKPLMERVSVDPPFTVSDLKQAIPPHCFKRSVIRSSYYIVHDAIIAYIFYFL 62
Query: 144 -------LAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHL 196
L A AYL WPLYW Q ++ L+V+GH+CGH +FS+ ++ VG +
Sbjct: 63 ADKYIPILPAPLAYL----AWPLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFI 118
Query: 197 LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVSNS-LCLWY 239
LHS ++ PY W+ SHR HH N ++NDE + P S + + L+Y
Sbjct: 119 LHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYY 162
>sp|P59668|FAD12_MORIS Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1
Length = 400
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 107 PPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNN-------WVVWPL 159
P F + +IR IP HC+ + + + +V D+ L AA ++ ++ WP
Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLFLAATQIDKFENPLIRYLAWPA 95
Query: 160 YWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNH 219
YW QG + ++VL H+CGH SFS LN+ VG +LHS +LVPYH WRISH HH+
Sbjct: 96 YWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKAT 155
Query: 220 GHVENDESWHPVSNS 234
GH+ D+ + P + S
Sbjct: 156 GHMTKDQVFVPKTRS 170
>sp|Q9Y8H5|FAD12_MORAP Delta(12) fatty acid desaturase OS=Mortierella alpina PE=1 SV=2
Length = 400
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 107 PPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNN-------WVVWPL 159
P F + +IR IP HC+ + + + +V D+ L AA ++ ++ WP
Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLFLAATQIDKFENPLIRYLAWPA 95
Query: 160 YWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNH 219
YW QG + ++VL H+CGH SFS LN+ VG +LHS +LVPYH WRISH HH+
Sbjct: 96 YWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKAT 155
Query: 220 GHVENDESWHPVSNS 234
GH+ D+ + P + S
Sbjct: 156 GHMTKDQVFVPKTRS 170
>sp|Q54794|DESA_SPIPL Fatty acid desaturase OS=Spirulina platensis GN=desA PE=3 SV=1
Length = 351
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 93 VEEEEGSEFDPGAPPPFKLA-DIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYL 151
V+ E+ S P L DI +P +V+D +K+ V+ +VV+V GL +
Sbjct: 6 VKSEDSSSRPSAVPSDLPLEEDIINTLPSGVFVQDRYKAWMTVIINVVMV-GLGWLGIAI 64
Query: 152 NNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRIS 211
W + P+ W GT FV+GHDCGH SFS + +N VGH+L I+ P+H WRI
Sbjct: 65 APWFLLPVVWVFTGTALTGFFVIGHDCGHRSFSRNVWVNDWVGHILFLPIIYPFHSWRIG 124
Query: 212 HRTHHQNHGHVENDESWHP 230
H HH+ +E D +W P
Sbjct: 125 HNQHHKYTNRMELDNAWQP 143
>sp|P46312|FAD6C_ARATH Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis
thaliana GN=FAD6 PE=1 SV=2
Length = 448
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 79/187 (42%), Gaps = 14/187 (7%)
Query: 46 SVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGA 105
S +C R V+AP VAP + E+R G + E+
Sbjct: 53 SRRCVAPVKRRIGCIKAVAAP--VAPPSADSAEDREQLAESYGFRQIGED---------L 101
Query: 106 PPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVV-VVFGLAAAAAYLNNWVVWPLYWAAQ 164
P L DI +PK + D K++ V+ V GL A + W + PL WA
Sbjct: 102 PENVTLKDIMDTLPKEVFEIDDLKALKSVLISVTSYTLGLFMIAK--SPWYLLPLAWAWT 159
Query: 165 GTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVEN 224
GT FV+GHDC H SFS + + +VG L ++ PY WR H HH + +
Sbjct: 160 GTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVH 219
Query: 225 DESWHPV 231
D +W PV
Sbjct: 220 DTAWQPV 226
>sp|P48628|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2
SV=1
Length = 424
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 53 FSRDRNWGLK--------VSAPLRVAPLEGEDEEERIN---GVNGIGNNKGVEEEEGSEF 101
F R RN+ + V+ P++ AP+E + +++ G +G +
Sbjct: 46 FRRQRNFVTRNKVTVIHAVAIPVQPAPVESAEYRKQLAEDYGFRQVGEPLSDDVTLKDVI 105
Query: 102 DPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYW 161
+P F++ D++A WKS+ V + + + A W + PL W
Sbjct: 106 NPLPKEVFEIDDVKA-----------WKSVLISVTSYALGLFMISKAP----WYLLPLAW 150
Query: 162 AAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGH 221
GT FV+GHDC H SFS++ + +VG L ++ PY WR H HH
Sbjct: 151 VWTGTAITGFFVIGHDCAHRSFSSNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHAKTNM 210
Query: 222 VENDESWHPV 231
+ D +WHPV
Sbjct: 211 LREDTAWHPV 220
>sp|P48627|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2
SV=1
Length = 443
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 69 VAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKD-- 126
VAP ++ E+R G + ++ P L DI +PK + D
Sbjct: 69 VAPPSADNAEDREQLAESYGFKQIGQD---------LPDNVTLKDIMDTLPKEVFEIDDV 119
Query: 127 -PWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 185
WKS+ V + + A A W + PL WA GT FV+GHDC H SFS
Sbjct: 120 KAWKSVLISVTSYALGLFMIAKAP----WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSK 175
Query: 186 DHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 231
+ + +VG L ++ PY WR H HH + +D +W PV
Sbjct: 176 NKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPV 221
>sp|P48629|FAD6C_SPIOL Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea
GN=FAD6 PE=1 SV=1
Length = 447
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 91 KGVEEEEGSEFDPGAPPP--FKLADIRAAIPKHCWVKDPWKSMSYVVRDVVV----VFGL 144
K + E G + G P P + DI ++PK + + K+ V+ V +F +
Sbjct: 86 KQLAERYGFQ-QIGEPLPDDVTMRDIITSLPKQVFEINDTKAWGTVLISVTSYALGIFMI 144
Query: 145 AAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVP 204
A A W + PL WA GT FV+GHDC H SFS + + +VG L ++ P
Sbjct: 145 AKAP-----WYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYP 199
Query: 205 YHGWRISHRTHHQNHGHVENDESWHPV 231
Y WR H HH + D +W P+
Sbjct: 200 YEPWRFKHDQHHTKTNMLREDTAWLPI 226
>sp|P20388|DESA_SYNY3 Fatty acid desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=desA PE=3 SV=1
Length = 351
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 109 FKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLN----NWVVWPLYWAAQ 164
KL DI +PK C+ K K+ + V++ G A A YL W P+ W
Sbjct: 24 LKLQDIIKTLPKECFEKKASKAWA----SVLITLG-AIAVGYLGIIYLPWYCLPITWIWT 78
Query: 165 GTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVEN 224
GT FV+GHDCGH SF+ +N +VGH+ + ++ P+H WR+ H HH + +E
Sbjct: 79 GTALTGAFVVGHDCGHRSFAKKRWVNDLVGHIAFAPLIYPFHSWRLLHDHHHLHTNKIEV 138
Query: 225 DESWHPVS 232
D +W P S
Sbjct: 139 DNAWDPWS 146
>sp|O34653|DES_BACSU Fatty acid desaturase OS=Bacillus subtilis (strain 168) GN=des PE=2
SV=1
Length = 352
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 171 LFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVEN 224
+F++ HDC H SF + N ++G L L PY W+ SH HH +++
Sbjct: 71 IFIIFHDCCHQSFFKQKRYNHILGFLTGVLTLFPYLQWQHSHSIHHATSSNLDK 124
>sp|P30372|ACM2_CHICK Muscarinic acetylcholine receptor M2 OS=Gallus gallus GN=CHRM2 PE=3
SV=1
Length = 466
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 129 KSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH-----DCGHGSF 183
K ++Y V+ + G+ AAA++ ++++W A +FW V G DC F
Sbjct: 130 KPLTYPVKRTTKMAGMMIAAAWVLSFILW-----APAILFWQFIVGGRTVPDKDCYIQFF 184
Query: 184 SNDH-KLNSVVGHLLHSSILVPYHGWRISHRTHHQ-NHGHVENDESWHPVSNSL 235
SN + + I++ W+IS + + G E ++ PVS SL
Sbjct: 185 SNPAVTFGTAIAAFYLPVIIMTVLYWQISRASKSRIKKGKKEAAQNQDPVSPSL 238
>sp|Q5RAG4|RNFT2_PONAB RING finger and transmembrane domain-containing protein 2 OS=Pongo
abelii GN=RNFT2 PE=2 SV=1
Length = 444
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 88 GNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVV-----------R 136
G+++G EE G E PG P P L++++A I CW++ K + +++
Sbjct: 132 GDHRGHSEEGGDE-QPGTPAP-ALSELKAVI---CWLQ---KGLPFILILLAKLCFQHKL 183
Query: 137 DVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHG-----SFSNDHKLNS 191
+ V G+A+ AY N+ + + + ++ L++L G+ +FS+ NS
Sbjct: 184 GIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQLYNS 243
Query: 192 VV 193
++
Sbjct: 244 LI 245
>sp|Q96EX2|RNFT2_HUMAN RING finger and transmembrane domain-containing protein 2 OS=Homo
sapiens GN=RNFT2 PE=2 SV=2
Length = 444
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 88 GNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVV-----------R 136
G+++G EE G E PG P P L++++A I CW++ K + +++
Sbjct: 132 GDHRGHSEEGGDE-QPGTPAP-ALSELKAVI---CWLQ---KGLPFILILLAKLCFQHKL 183
Query: 137 DVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHG-----SFSNDHKLNS 191
+ V G+A+ AY N+ + + + ++ L++L G+ +FS+ NS
Sbjct: 184 GIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQLYNS 243
Query: 192 VV 193
++
Sbjct: 244 LI 245
>sp|Q39982|CRTW_HAEPL Beta-carotene ketolase OS=Haematococcus pluvialis PE=2 SV=1
Length = 320
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 167 MFWALFVLGHDCGHGSFSNDHK-LNSVVGHLLHSSILVPYHGWRISHRTH---HQNHGHV 222
++ LF+ HD HG+ + H+ LN ++G++ S L + + + HR H H + G V
Sbjct: 121 LYTGLFITTHDAMHGTIALRHRQLNDLLGNICIS--LYAWFDYSMLHRKHWEHHNHTGEV 178
Query: 223 ENDESWHPVSNSLCLWY 239
D +H + L W+
Sbjct: 179 GKDPDFHKGNPGLVPWF 195
>sp|O87567|YIDC_BACPE Membrane protein insertase YidC OS=Bacillus pseudofirmus (strain
OF4) GN=yidC PE=3 SV=2
Length = 252
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 101 FDPGAPPPFKLADIRAAIPKHCWVK-------DPWKSMSYVVRDVVVVFGLAAAAAYLNN 153
FD G+P P + + A I VK D K + Y++ ++VV G+ +A
Sbjct: 165 FDLGSPDPLYILPVVAGITTFLQVKMTSFQLNDQMKVIIYIMPVMIVVAGVTLPSALSLY 224
Query: 154 WVVWPLYWAAQ 164
WVV L+ Q
Sbjct: 225 WVVGNLFMIIQ 235
>sp|Q8NKG9|SLD1_LACK1 Delta(8)-fatty-acid desaturase OS=Lachancea kluyveri (strain ATCC
58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 /
NCYC 543 / NRRL Y-12651) GN=SLD PE=1 SV=1
Length = 568
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 140 VVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHS 199
++F L+ Y + W + + G + L + HD GH S ++ ++L+++ G ++ S
Sbjct: 225 LLFALSYYLLYHRDQKFWSAF--SMGCAWQQLVFIAHDAGHISITHHYQLDNIFGMIIAS 282
Query: 200 SILVPYHG-WRISHRTHH 216
+ G W+ +H HH
Sbjct: 283 WVGGLSLGWWKRNHNVHH 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,856,471
Number of Sequences: 539616
Number of extensions: 4867208
Number of successful extensions: 11610
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 11561
Number of HSP's gapped (non-prelim): 43
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)