Query 025223
Match_columns 256
No_of_seqs 214 out of 1352
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 06:05:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025223.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025223hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2heka1 a.211.1.1 (A:1-369) Hy 19.5 21 0.0015 29.2 1.9 16 170-185 78-93 (369)
2 d2o6ia1 a.211.1.1 (A:1-453) Hy 16.0 25 0.0018 30.8 1.7 15 171-185 105-119 (453)
3 g1h8d.1 b.47.1.2 (L:,H:) Throm 14.4 23 0.0016 27.9 0.8 9 7-15 2-10 (289)
4 d1xuca1 d.92.1.11 (A:104-272) 5.0 54 0.004 23.5 -0.7 8 173-180 116-123 (169)
5 d1twfl_ g.41.9.2 (L:) RBP12 su 4.9 1.2E+02 0.0086 18.6 1.1 13 175-187 24-36 (46)
6 d1rm8a_ d.92.1.11 (A:) Matrix 4.9 56 0.0041 23.0 -0.7 9 173-181 120-128 (169)
7 d2i47a1 d.92.1.10 (A:220-473) 4.8 66 0.0048 24.9 -0.3 13 228-240 231-243 (254)
8 d1mmqa_ d.92.1.11 (A:) Matrily 4.7 59 0.0043 23.4 -0.7 9 173-181 117-125 (166)
9 d1k9xa_ d.92.1.5 (A:) Thermost 4.3 65 0.0048 28.7 -0.8 44 169-212 260-318 (497)
10 d1jjcb2 a.6.1.1 (B:400-474) Do 4.3 1.3E+02 0.0093 19.5 0.9 28 61-88 43-71 (75)
No 1
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}
Probab=19.46 E-value=21 Score=29.24 Aligned_cols=16 Identities=50% Similarity=0.596 Sum_probs=12.6
Q ss_pred HHHhhhcccCCCCccC
Q 025223 170 ALFVLGHDCGHGSFSN 185 (256)
Q Consensus 170 ~LfvL~HDcgHgS~fr 185 (256)
.+..|.||.||+-|+.
T Consensus 78 ~~A~LlHDiGh~PFsH 93 (369)
T d2heka1 78 KLAGLLHDLGHPPFSH 93 (369)
T ss_dssp HHHHHTTTTTCCSSSS
T ss_pred HHHHHHhhcccchhhh
Confidence 3446889999999973
No 2
>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]}
Probab=16.03 E-value=25 Score=30.81 Aligned_cols=15 Identities=47% Similarity=0.771 Sum_probs=12.0
Q ss_pred HHhhhcccCCCCccC
Q 025223 171 LFVLGHDCGHGSFSN 185 (256)
Q Consensus 171 LfvL~HDcgHgS~fr 185 (256)
+..|.||-||+-||.
T Consensus 105 ~AaLlHDiGHgPfSH 119 (453)
T d2o6ia1 105 CAALLHDVGHGPYSH 119 (453)
T ss_dssp HHHHHTTTTCCTTHH
T ss_pred HHHHHhccCcccccc
Confidence 345789999999973
No 3
>g1h8d.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.45 E-value=23 Score=27.90 Aligned_cols=9 Identities=56% Similarity=1.346 Sum_probs=7.0
Q ss_pred cccCCCCCC
Q 025223 7 SECGLKPLP 15 (256)
Q Consensus 7 ~~~~~~~~~ 15 (256)
+|||+||+-
T Consensus 2 ~~~~~~~~~ 10 (289)
T g1h8d.1 2 ADCGLRPLF 10 (289)
T ss_dssp CC-CCCTTT
T ss_pred CccccCccc
Confidence 799999985
No 4
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.99 E-value=54 Score=23.47 Aligned_cols=8 Identities=50% Similarity=0.966 Sum_probs=4.8
Q ss_pred hhhcccCC
Q 025223 173 VLGHDCGH 180 (256)
Q Consensus 173 vL~HDcgH 180 (256)
++.||.||
T Consensus 116 v~~HEiGH 123 (169)
T d1xuca1 116 VAAHEFGH 123 (169)
T ss_dssp HHHHHHHH
T ss_pred ehhhhhcc
Confidence 55677655
No 5
>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.92 E-value=1.2e+02 Score=18.62 Aligned_cols=13 Identities=31% Similarity=0.657 Sum_probs=9.7
Q ss_pred hcccCCCCccCCc
Q 025223 175 GHDCGHGSFSNDH 187 (256)
Q Consensus 175 ~HDcgHgS~frn~ 187 (256)
-.||||.-++|.+
T Consensus 24 CreCG~RIlYK~R 36 (46)
T d1twfl_ 24 CKDCGHRILLKAR 36 (46)
T ss_dssp CSSSCCCCCBCCC
T ss_pred eccCCcEEEEeec
Confidence 3688888888754
No 6
>d1rm8a_ d.92.1.11 (A:) Matrix metalloproteinase-16 (MMP-16) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.86 E-value=56 Score=23.02 Aligned_cols=9 Identities=44% Similarity=0.711 Sum_probs=5.1
Q ss_pred hhhcccCCC
Q 025223 173 VLGHDCGHG 181 (256)
Q Consensus 173 vL~HDcgHg 181 (256)
++.||.||.
T Consensus 120 v~~HEiGHa 128 (169)
T d1rm8a_ 120 VAVHELGHA 128 (169)
T ss_dssp HHHHHHHHH
T ss_pred hhhhhhhhh
Confidence 455666553
No 7
>d2i47a1 d.92.1.10 (A:220-473) TNF-alpha converting enzyme, TACE, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.80 E-value=66 Score=24.92 Aligned_cols=13 Identities=8% Similarity=0.018 Sum_probs=8.2
Q ss_pred CCCCChHHHHHHH
Q 025223 228 WHPVSNSLCLWYL 240 (256)
Q Consensus 228 ~~P~~~~~~~~~l 240 (256)
|.|=+...+..++
T Consensus 231 fS~CS~~~~~~~l 243 (254)
T d2i47a1 231 FSQCSKQSIYKTI 243 (254)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHH
Confidence 6666666666654
No 8
>d1mmqa_ d.92.1.11 (A:) Matrilysin (MMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.71 E-value=59 Score=23.45 Aligned_cols=9 Identities=33% Similarity=0.667 Sum_probs=5.3
Q ss_pred hhhcccCCC
Q 025223 173 VLGHDCGHG 181 (256)
Q Consensus 173 vL~HDcgHg 181 (256)
++.||.||-
T Consensus 117 v~~HEiGHa 125 (166)
T d1mmqa_ 117 AATHELGHS 125 (166)
T ss_dssp HHHHHHHHH
T ss_pred hhhhhhccc
Confidence 556776653
No 9
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=4.30 E-value=65 Score=28.66 Aligned_cols=44 Identities=9% Similarity=0.065 Sum_probs=26.4
Q ss_pred HHHHhhhcccCCCCccCC--------ch-------HHHHHHHHHHhhcccChHHhHHHh
Q 025223 169 WALFVLGHDCGHGSFSND--------HK-------LNSVVGHLLHSSILVPYHGWRISH 212 (256)
Q Consensus 169 ~~LfvL~HDcgHgS~frn--------~~-------lN~vvG~l~~l~lg~p~~~WR~~H 212 (256)
.+++.+.||+||+....+ +. +=...+++.-..++-|...|+...
T Consensus 260 ~~l~s~iHE~GHalYEq~l~~~~~~~plg~~~s~giHESQSr~~En~vgrs~~F~~~~~ 318 (497)
T d1k9xa_ 260 RTILSTVHEFGHALYELQQDERFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIY 318 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGTTSTTSSCSCHHHHHHHHHHHHTTTTTSHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHhCCCHhHccCCccCCCCcccccHHHHHHHHHHhcCHHHHHHHh
Confidence 466677899999765422 11 223334444346788888888654
No 10
>d1jjcb2 a.6.1.1 (B:400-474) Domains B1 and B5 of PheRS-beta, PheT {Thermus thermophilus [TaxId: 274]}
Probab=4.28 E-value=1.3e+02 Score=19.50 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=16.4
Q ss_pred EEEeeccccCCCC-CchHHhhhhcccCCC
Q 025223 61 LKVSAPLRVAPLE-GEDEEERINGVNGIG 88 (256)
Q Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 88 (256)
+.|.+|.-..-+. ++|=-|.+++.||++
T Consensus 43 ~~V~vPs~R~Di~~~~DliEEi~R~~Gyd 71 (75)
T d1jjcb2 43 YRVTPPSHRLDLRLEEDLVEEVARIQGYE 71 (75)
T ss_dssp EEEECCTTCTTCCSHHHHHHHHHHHHCGG
T ss_pred EEEecchhccccCCcchHHHHHHHHhCcc
Confidence 5567787444443 333233478899995
Done!