Your job contains 1 sequence.
>025226
MATRLFSRSKIPILASIVLQNLTKNPSKNFSFLAFKPKSPIVDFVAHEPILGLRQYHDGR
PRGSLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQE
ETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTY
TEVIRGFLKDGSPADAMNIYEDMIKSPDPPEELPFRILLKGLLPHPLLRSKVKKDFEELF
PEKHAYDPPEEIFGKL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025226
(256 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102832 - symbol:AT3G46870 species:3702 "Arabi... 891 2.8e-89 1
TAIR|locus:2027149 - symbol:AT1G62350 "AT1G62350" species... 419 2.9e-39 1
TAIR|locus:2184727 - symbol:VPS9B "AT5G09320" species:370... 167 3.9e-10 1
TAIR|locus:2081041 - symbol:PPR2 "pentatricopeptide repea... 142 3.0e-07 1
TAIR|locus:2121529 - symbol:EMB3131 "EMBRYO DEFECTIVE 313... 137 2.1e-06 1
TAIR|locus:2089154 - symbol:EMB3123 "EMBRYO DEFECTIVE 312... 126 3.7e-06 1
TAIR|locus:2017754 - symbol:AT1G22960 species:3702 "Arabi... 134 4.7e-06 1
TAIR|locus:2026172 - symbol:NG1 "novel gene 1" species:37... 131 6.0e-06 1
TAIR|locus:2093472 - symbol:AT3G16010 species:3702 "Arabi... 132 7.0e-06 1
TAIR|locus:2012883 - symbol:AT1G20300 species:3702 "Arabi... 129 1.2e-05 1
TAIR|locus:2122561 - symbol:EMB2453 "EMBRYO DEFECTIVE 245... 127 2.2e-05 1
TAIR|locus:2132937 - symbol:RPF5 "AT4G28010" species:3702... 128 2.3e-05 1
TAIR|locus:2156213 - symbol:AT5G65820 species:3702 "Arabi... 127 2.6e-05 1
TAIR|locus:2031825 - symbol:AT1G13040 species:3702 "Arabi... 125 3.3e-05 1
TAIR|locus:2038451 - symbol:AT1G63230 species:3702 "Arabi... 121 4.2e-05 1
TAIR|locus:2170907 - symbol:AT5G43820 species:3702 "Arabi... 124 4.6e-05 1
TAIR|locus:2150024 - symbol:AT5G01110 species:3702 "Arabi... 125 5.3e-05 1
TAIR|locus:2206385 - symbol:EMB2217 "embryo defective 221... 119 5.6e-05 2
TAIR|locus:2163218 - symbol:AT5G61400 "AT5G61400" species... 124 5.9e-05 1
TAIR|locus:2170538 - symbol:AT5G40400 "AT5G40400" species... 122 9.2e-05 1
TAIR|locus:2203916 - symbol:AT1G62590 species:3702 "Arabi... 122 9.7e-05 1
TAIR|locus:2174165 - symbol:AT5G16640 species:3702 "Arabi... 120 0.00012 1
TAIR|locus:2164910 - symbol:EMB2745 "EMBRYO DEFECTIVE 274... 122 0.00012 1
TAIR|locus:2175443 - symbol:AT5G04810 species:3702 "Arabi... 123 0.00013 1
TAIR|locus:2171352 - symbol:AT5G16420 "AT5G16420" species... 120 0.00013 1
TAIR|locus:2095309 - symbol:AT3G09060 "AT3G09060" species... 121 0.00014 1
TAIR|locus:2151281 - symbol:AT5G02860 species:3702 "Arabi... 121 0.00017 1
TAIR|locus:2083976 - symbol:MEE40 "maternal effect embryo... 120 0.00021 1
TAIR|locus:2163041 - symbol:AT5G41170 species:3702 "Arabi... 118 0.00022 1
TAIR|locus:2161408 - symbol:AT5G46100 "AT5G46100" species... 117 0.00024 1
TAIR|locus:2116772 - symbol:PGR3 "AT4G31850" species:3702... 121 0.00025 1
TAIR|locus:2015218 - symbol:AT1G63070 species:3702 "Arabi... 118 0.00025 1
TAIR|locus:2035206 - symbol:AT1G52640 species:3702 "Arabi... 116 0.00036 1
TAIR|locus:2133352 - symbol:AT4G01570 species:3702 "Arabi... 108 0.00038 2
TAIR|locus:2119747 - symbol:EMB1025 "embryo defective 102... 117 0.00038 1
TAIR|locus:2014759 - symbol:FAC19 "AT1G13800" species:370... 118 0.00043 1
TAIR|locus:2144915 - symbol:AT5G18950 "AT5G18950" species... 114 0.00054 1
TAIR|locus:2204913 - symbol:AT1G02420 "AT1G02420" species... 114 0.00056 1
TAIR|locus:2015494 - symbol:RPF3 "RNA processing factor 3... 115 0.00061 1
TAIR|locus:2024537 - symbol:AT1G64100 species:3702 "Arabi... 115 0.00065 1
TAIR|locus:2098495 - symbol:AT3G07290 "AT3G07290" species... 116 0.00071 1
TAIR|locus:2039415 - symbol:AT2G16880 "AT2G16880" species... 115 0.00075 1
TAIR|locus:2015228 - symbol:AT1G63080 species:3702 "Arabi... 114 0.00076 1
TAIR|locus:2015208 - symbol:AT1G63130 species:3702 "Arabi... 114 0.00079 1
TAIR|locus:2097395 - symbol:AT3G49730 species:3702 "Arabi... 114 0.00080 1
TAIR|locus:2026207 - symbol:AT1G62680 species:3702 "Arabi... 113 0.00084 1
TAIR|locus:2198005 - symbol:AT1G26460 "AT1G26460" species... 100 0.00086 2
TAIR|locus:2009620 - symbol:AT1G53330 species:3702 "Arabi... 112 0.00089 1
TAIR|locus:2077637 - symbol:AT3G06920 "AT3G06920" species... 115 0.00092 1
TAIR|locus:2024296 - symbol:AT1G09900 "AT1G09900" species... 113 0.00095 1
TAIR|locus:2084978 - symbol:AT3G04760 species:3702 "Arabi... 113 0.00096 1
TAIR|locus:2089388 - symbol:AT3G16710 species:3702 "Arabi... 112 0.00099 1
>TAIR|locus:2102832 [details] [associations]
symbol:AT3G46870 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 PROSITE:PS51375
TIGRFAMs:TIGR00756 EMBL:AL096859 Pfam:PF13041 EMBL:AK117833
EMBL:BT005267 IPI:IPI00542606 PIR:T12961 RefSeq:NP_190271.1
UniGene:At.35875 ProteinModelPortal:Q9STF9 PaxDb:Q9STF9
PRIDE:Q9STF9 EnsemblPlants:AT3G46870.1 GeneID:823840
KEGG:ath:AT3G46870 TAIR:At3g46870 eggNOG:NOG239626
HOGENOM:HOG000244234 InParanoid:Q9STF9 OMA:FHDGRPR PhylomeDB:Q9STF9
ProtClustDB:CLSN2685138 Genevestigator:Q9STF9 Uniprot:Q9STF9
Length = 257
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 169/256 (66%), Positives = 210/256 (82%)
Query: 2 ATRLFSRSKIPILASIVLQNLTKNPS-KNFSFLAFKPKSPIVDFVAHEPI-LGLRQYHDG 59
A R+ SR K P ASI QN+T+NPS SF KPK+ ++ + +P + + ++HDG
Sbjct: 3 AIRVCSR-KFPTFASIFFQNITRNPSIHRISFSNLKPKT-LLHPIPPKPFTVFVSRFHDG 60
Query: 60 RPRGSLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQ 119
RPRG LWRGKKLIGKEALFVILGLKR K+D+EKL KFIKTHV RLLK+D++AV+ ELERQ
Sbjct: 61 RPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQ 120
Query: 120 EETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQT 179
EET LA+K+F++I+KQ+WYQPD ++YKDLI++LA++ +M+EAM +WE M+KE+LFPDSQT
Sbjct: 121 EETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQT 180
Query: 180 YTEVIRGFLKDGSPADAMNIYEDMIKSPDPPEELPFRIXXXXXXXXXXXRSKVKKDFEEL 239
YTEVIRGFL+DG PADAMN+YEDM+KSPDPPEELPFR+ R+KVKKDFEEL
Sbjct: 181 YTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEEL 240
Query: 240 FPEKHAYDPPEEIFGK 255
FPEKHAYDPPEEIFG+
Sbjct: 241 FPEKHAYDPPEEIFGR 256
>TAIR|locus:2027149 [details] [associations]
symbol:AT1G62350 "AT1G62350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003113 PROSITE:PS51375
Pfam:PF01535 HOGENOM:HOG000244234 EMBL:DQ446386 EMBL:DQ652908
IPI:IPI00852319 PIR:T01445 RefSeq:NP_176425.2 UniGene:At.52322
ProteinModelPortal:Q1PFH7 EnsemblPlants:AT1G62350.1 GeneID:842533
KEGG:ath:AT1G62350 TAIR:At1g62350 eggNOG:NOG251096
InParanoid:Q1PFH7 OMA:LMMLARN PhylomeDB:Q1PFH7
ProtClustDB:CLSN2699147 Genevestigator:Q1PFH7 Uniprot:Q1PFH7
Length = 196
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 76/181 (41%), Positives = 117/181 (64%)
Query: 72 IGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQEETILAVKIFDI 131
+ KE L LKR + +L +FI +HV RLLK D+V+VL E +RQ + L +K++++
Sbjct: 1 MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60
Query: 132 IRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDG 191
+R++ WY+PD + Y+D+++ LAR K++E +VWE ++KE++ D T+ +++RGFL +
Sbjct: 61 VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120
Query: 192 SPADAMNIYEDMIKSPDPPEELPFRIXXXXXXXXXXXRSKVKKDFEELFPEKHAYDPPEE 251
P +AM +Y +M +SPD P LPFR+ R KVK DF ELFP YDPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180
Query: 252 I 252
I
Sbjct: 181 I 181
>TAIR|locus:2184727 [details] [associations]
symbol:VPS9B "AT5G09320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006810 "transport" evidence=ISS]
Pfam:PF02204 EMBL:CP002688 EMBL:AL391712 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 IPI:IPI00543083
RefSeq:NP_196494.1 UniGene:At.32529 ProteinModelPortal:Q9FY83
SMR:Q9FY83 EnsemblPlants:AT5G09320.1 GeneID:830791
KEGG:ath:AT5G09320 TAIR:At5g09320 HOGENOM:HOG000152589
InParanoid:Q9FY83 OMA:FASNTED PhylomeDB:Q9FY83
ProtClustDB:CLSN2916871 ArrayExpress:Q9FY83 Genevestigator:Q9FY83
Uniprot:Q9FY83
Length = 712
Score = 167 (63.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 49/164 (29%), Positives = 78/164 (47%)
Query: 93 LQKFIKTHVLRLLKMDIVAVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIAL 152
L + I + RLLK D+VAVL EL RQ E LA+K+F+ IRK+ WY+P +Y D+I +
Sbjct: 541 LDRVIISKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVM 600
Query: 153 ARTGKMNEAMQVWESMRKED-LFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSPDPPE 211
A M E ++ +M+ E L + + + ++ L M+ Y M P+
Sbjct: 601 ADNSLMEEVNYLYSAMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPD 660
Query: 212 ELPFRIXXXXXXXXXXX--RSKVKKDFEELFPEKHAY-DPPEEI 252
FR+ + V++D E + E + + EEI
Sbjct: 661 RASFRVLVLGLESNGEMGLSAIVRQDAHEYYGESLEFIEEDEEI 704
>TAIR|locus:2081041 [details] [associations]
symbol:PPR2 "pentatricopeptide repeat 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0048868 "pollen tube development" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0019843 "rRNA binding" evidence=IDA] InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555
GO:GO:0009790 PROSITE:PS51375 EMBL:AC011623 GO:GO:0009553
GO:GO:0019843 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0048868 Pfam:PF13041 EMBL:AY099616 EMBL:BT006618
IPI:IPI00541784 RefSeq:NP_187294.1 UniGene:At.40524
ProteinModelPortal:Q9SQU6 SMR:Q9SQU6 IntAct:Q9SQU6 PaxDb:Q9SQU6
PRIDE:Q9SQU6 EnsemblPlants:AT3G06430.1 GeneID:819817
KEGG:ath:AT3G06430 TAIR:At3g06430 eggNOG:NOG263130
HOGENOM:HOG000239665 InParanoid:Q9SQU6 OMA:KAGEFPG PhylomeDB:Q9SQU6
ProtClustDB:CLSN2684658 Genevestigator:Q9SQU6 Uniprot:Q9SQU6
Length = 486
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 27/99 (27%), Positives = 57/99 (57%)
Query: 109 IVAVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESM 168
+ L +L +++ + A+++FD++R+Q +YQP Y L++ L ++G+ N A ++++ M
Sbjct: 91 VTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEM 150
Query: 169 RKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSP 207
+E L P + YT ++ + + DA +I + M P
Sbjct: 151 LEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFP 189
>TAIR|locus:2121529 [details] [associations]
symbol:EMB3131 "EMBRYO DEFECTIVE 3131" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AL080254 EMBL:AL161553 Pfam:PF13041 IPI:IPI00525931 PIR:T10616
RefSeq:NP_193806.1 UniGene:At.54441 ProteinModelPortal:Q9SVH3
SMR:Q9SVH3 EnsemblPlants:AT4G20740.1 GeneID:827823
KEGG:ath:AT4G20740 TAIR:At4g20740 eggNOG:NOG247375
HOGENOM:HOG000242162 InParanoid:Q9SVH3 OMA:QFEILIR PhylomeDB:Q9SVH3
ProtClustDB:CLSN2685315 Genevestigator:Q9SVH3 Uniprot:Q9SVH3
Length = 727
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 38/141 (26%), Positives = 74/141 (52%)
Query: 71 LIGKEALFVIL--GLKRFKDDEEKLQKFIKTHVLRLLKMDIVA--VLIELERQEETILA- 125
L+ + F+IL GL + EE L+ ++ L K D+ A +I+ E + A
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLE-ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS 317
Query: 126 VKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIR 185
++++D +R+ D +PD Y L++ L + G++ +++ M+ + + D + Y +I
Sbjct: 318 LRVWDEMRR-DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 186 GFLKDGSPADAMNIYEDMIKS 206
GF+ DG A N++ED++ S
Sbjct: 377 GFVADGKVRSACNLWEDLVDS 397
>TAIR|locus:2089154 [details] [associations]
symbol:EMB3123 "EMBRYO DEFECTIVE 3123" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0000373 "Group II intron splicing" evidence=IMP] [GO:0003723
"RNA binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009658 GO:GO:0003723 EMBL:AB018114 GO:GO:0000373
UniGene:At.27365 UniGene:At.70371 EMBL:AY600581 EMBL:AY924778
IPI:IPI00529937 RefSeq:NP_189412.1 ProteinModelPortal:Q9LVW6
PaxDb:Q9LVW6 PRIDE:Q9LVW6 EnsemblPlants:AT3G27750.1 GeneID:822397
KEGG:ath:AT3G27750 TAIR:At3g27750 eggNOG:NOG304608
HOGENOM:HOG000237520 InParanoid:Q9LVW6 OMA:RCGPRDN PhylomeDB:Q9LVW6
ProtClustDB:CLSN2685032 ArrayExpress:Q9LVW6 Genevestigator:Q9LVW6
Uniprot:Q9LVW6
Length = 222
Score = 126 (49.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 62 RGSLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQEE 121
RG L +G+ ++ EA+ I LKR L ++ + RL+K D+++VL EL RQ+
Sbjct: 39 RGPLLKGR-ILSTEAIQSIQSLKRAHRTGVSLSLTLRP-LRRLIKSDLISVLRELLRQDY 96
Query: 122 TILAVKIFDIIRKQDWYQP-DAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTY 180
LAV + +R + Y P D +Y D++ AL R + +E ++ + D D +
Sbjct: 97 CTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQRSDDKAL 154
Query: 181 TEVIRGFLKDGSPADAMNIYEDMIKS 206
++IR + + +Y M +S
Sbjct: 155 AKLIRAVVGAERRESVVRVYTLMRES 180
>TAIR|locus:2017754 [details] [associations]
symbol:AT1G22960 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AF000657 Pfam:PF13041 IPI:IPI00538383
PIR:F86363 RefSeq:NP_173709.1 UniGene:At.65923
ProteinModelPortal:P0C7Q9 SMR:P0C7Q9 EnsemblPlants:AT1G22960.1
GeneID:838903 KEGG:ath:AT1G22960 GeneFarm:4850 TAIR:At1g22960
eggNOG:NOG269870 HOGENOM:HOG000243968 OMA:HESREVE PhylomeDB:P0C7Q9
ProtClustDB:CLSN2914414 Genevestigator:P0C7Q9 Uniprot:P0C7Q9
Length = 718
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 128 IFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGF 187
+FD +R D + P Y LI L +G + A ++ E M + +FPD TYT +++GF
Sbjct: 396 LFDDLRAGDIH-PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 188 LKDGSPADAMNIYEDMIKSPDPPE 211
+K+G+ + A +Y++M++ P+
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPD 478
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A ++ + + D + PD IY I L + G + +A++ + + L PD TYT VI
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 185 RGFLKDGSPADAMNIYEDMIK 205
RG+L++G A N+Y++M++
Sbjct: 558 RGYLENGQFKMARNLYDEMLR 578
>TAIR|locus:2026172 [details] [associations]
symbol:NG1 "novel gene 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0009845
"seed germination" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009845 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007190 TIGRFAMs:TIGR00756 HOGENOM:HOG000015176 Pfam:PF12854
Pfam:PF13041 EMBL:AK221583 EMBL:BT012561 IPI:IPI00546636
RefSeq:NP_176459.2 UniGene:At.36229 UniGene:At.71290
ProteinModelPortal:Q9SI78 SMR:Q9SI78 EnsemblPlants:AT1G62720.1
GeneID:842570 KEGG:ath:AT1G62720 GeneFarm:4357 TAIR:At1g62720
eggNOG:NOG286746 InParanoid:Q9SI78 OMA:YNIVINC PhylomeDB:Q9SI78
ProtClustDB:CLSN2920243 Genevestigator:Q9SI78 Uniprot:Q9SI78
Length = 485
Score = 131 (51.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
AV++FD + + D + DA Y L+ L +G+ ++A ++ M D+ P+ T+T VI
Sbjct: 193 AVELFDRMER-DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 185 RGFLKDGSPADAMNIYEDMIKS-PDP 209
F+K+G ++AM +YE+M + DP
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDP 277
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 22/88 (25%), Positives = 46/88 (52%)
Query: 130 DIIRKQD--WYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGF 187
D++ K + ++PD IY +I + G +N+A+++++ M ++ + D+ TY ++ G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 188 LKDGSPADAMNIYEDMIKSPDPPEELPF 215
G +DA + DM+ P + F
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITF 247
>TAIR|locus:2093472 [details] [associations]
symbol:AT3G16010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AB012247 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:BT004272 IPI:IPI00528889
RefSeq:NP_188222.1 UniGene:At.38958 ProteinModelPortal:Q9LW84
SMR:Q9LW84 PRIDE:Q9LW84 EnsemblPlants:AT3G16010.1 GeneID:820846
KEGG:ath:AT3G16010 TAIR:At3g16010 eggNOG:NOG289128
HOGENOM:HOG000238971 InParanoid:Q9LW84 OMA:CKTNRVE PhylomeDB:Q9LW84
ProtClustDB:CLSN2685290 Genevestigator:Q9LW84 Uniprot:Q9LW84
Length = 642
Score = 132 (51.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 30/101 (29%), Positives = 54/101 (53%)
Query: 111 AVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRK 170
A++ E+ A+++FD + K + QP IY L+ + GK+ +A+ ++E M++
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEM-KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSPDPPE 211
P TYTE+I+G K G +A Y+DM++ P+
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
>TAIR|locus:2012883 [details] [associations]
symbol:AT1G20300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC026234 Pfam:PF12854 Pfam:PF13041
EMBL:AF446865 EMBL:AY052274 IPI:IPI00526119 PIR:F86336
RefSeq:NP_564110.1 UniGene:At.26508 ProteinModelPortal:Q9LN22
PRIDE:Q9LN22 EnsemblPlants:AT1G20300.1 GeneID:838618
KEGG:ath:AT1G20300 GeneFarm:4848 TAIR:At1g20300 eggNOG:NOG269752
HOGENOM:HOG000243285 InParanoid:Q9LN22 OMA:FRRMEEY PhylomeDB:Q9LN22
ProtClustDB:CLSN2687879 Genevestigator:Q9LN22 Uniprot:Q9LN22
Length = 537
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/110 (27%), Positives = 57/110 (51%)
Query: 106 KMDIVAVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVW 165
K+ V+ L R+ A FD ++ D ++PD +Y +L+ R G+++EA +V+
Sbjct: 221 KIAFSIVISNLSRKRRASEAQSFFDSLK--DRFEPDVIVYTNLVRGWCRAGEISEAEKVF 278
Query: 166 ESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSPDPPEELPF 215
+ M+ + P+ TY+ VI + G + A +++ DM+ S P + F
Sbjct: 279 KEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
>TAIR|locus:2122561 [details] [associations]
symbol:EMB2453 "EMBRYO DEFECTIVE 2453" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009793
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161595 EMBL:AL078620
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AY864349
EMBL:BX826642 IPI:IPI00531445 PIR:T09378 RefSeq:NP_195672.1
UniGene:At.50413 ProteinModelPortal:Q9SV96 SMR:Q9SV96 PRIDE:Q9SV96
EnsemblPlants:AT4G39620.1 GeneID:830116 KEGG:ath:AT4G39620
TAIR:At4g39620 eggNOG:NOG239211 HOGENOM:HOG000239491
InParanoid:Q9SV96 OMA:RMAMWLF PhylomeDB:Q9SV96
ProtClustDB:CLSN2685705 ArrayExpress:Q9SV96 Genevestigator:Q9SV96
Uniprot:Q9SV96
Length = 563
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 47/186 (25%), Positives = 85/186 (45%)
Query: 22 LTKNPSKNFS-FLAFKPKSPIVDFVAHEPILGLRQYHDGRPR---GSLWRGKKLIGKEAL 77
LT S FS F++ PK ++ LG + R R G++ +KL +E+
Sbjct: 5 LTSPSSLRFSDFISSIPKETDHKWLRFSVNLGDAR-RSTRTRITCGAISSRRKLAERESA 63
Query: 78 -----FVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIE-LERQEETILAVKIFDI 131
++ L D E L K + +V ++++ D +L E L + ++ + +++F
Sbjct: 64 ERENRVLVRSLMSRISDREPLVKTLDKYV-KVVRCDHCFLLFEELGKSDKWLQCLEVFRW 122
Query: 132 IRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDG 191
++KQ WY PD +Y LI + + G+ AM ++ M+ PD+ Y +I L
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 192 SPADAM 197
A A+
Sbjct: 183 DKAKAL 188
>TAIR|locus:2132937 [details] [associations]
symbol:RPF5 "AT4G28010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 EMBL:AL161572 PROSITE:PS51375 EMBL:AL035524
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
EMBL:AY128275 IPI:IPI00521111 PIR:T02902 RefSeq:NP_194530.1
UniGene:At.32055 ProteinModelPortal:Q9SUD8 SMR:Q9SUD8 PaxDb:Q9SUD8
PRIDE:Q9SUD8 EnsemblPlants:AT4G28010.1 GeneID:828915
KEGG:ath:AT4G28010 TAIR:At4g28010 eggNOG:NOG330874
HOGENOM:HOG000115639 InParanoid:Q9SUD8 OMA:LKGLCRN PhylomeDB:Q9SUD8
ProtClustDB:CLSN2685540 Genevestigator:Q9SUD8 Uniprot:Q9SUD8
Length = 704
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A +IF+ + ++ +P+ Y Y LI L GK EA+Q+ M ++D P++ TY +I
Sbjct: 301 ASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 185 RGFLKDGSPADAMNIYEDMIKSPDPPEELPFRI 217
KDG ADA+ I E M K P+ + + I
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
>TAIR|locus:2156213 [details] [associations]
symbol:AT5G65820 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB020743 EMBL:AL021684 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 eggNOG:NOG325313
HOGENOM:HOG000240213 ProtClustDB:CLSN2686644 IPI:IPI00541720
PIR:T05888 RefSeq:NP_201383.1 UniGene:At.28891 UniGene:At.66672
ProteinModelPortal:Q9FH87 SMR:Q9FH87 PRIDE:Q9FH87
EnsemblPlants:AT5G65820.1 GeneID:836711 KEGG:ath:AT5G65820
TAIR:At5g65820 InParanoid:Q9FH87 OMA:KMYKRRG PhylomeDB:Q9FH87
Genevestigator:Q9FH87 Uniprot:Q9FH87
Length = 637
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 129 FDIIR--KQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRG 186
+D++R ++ ++P+A Y LI AL + +M EAM+V+ M + + D TYT ++ G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 187 FLKDGSPADAMNIYEDMIKSPDPPEELPF 215
F K G + +DMIK P EL +
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTY 395
>TAIR|locus:2031825 [details] [associations]
symbol:AT1G13040 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005774
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC007357 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 IPI:IPI00517168
PIR:D86264 RefSeq:NP_172763.1 UniGene:At.51593
ProteinModelPortal:Q9SAD9 SMR:Q9SAD9 EnsemblPlants:AT1G13040.1
GeneID:837861 KEGG:ath:AT1G13040 GeneFarm:4838 TAIR:At1g13040
eggNOG:NOG326012 HOGENOM:HOG000005801 InParanoid:Q9SAD9 OMA:YNRFIGV
PhylomeDB:Q9SAD9 ProtClustDB:CLSN2682487 Genevestigator:Q9SAD9
Uniprot:Q9SAD9
Length = 517
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 35/133 (26%), Positives = 68/133 (51%)
Query: 84 KRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQEETILAVKIFDIIRKQDWYQPDAY 143
K ++ EE QK + +V+ + I A L R+ + +A K+ D + + PD
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSL-IKAFL----REGNSSVAKKLLDQMTELG-LSPDRI 396
Query: 144 IYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDM 203
Y ++ L ++G +++A V+ M + ++ PD+ +Y +I G + G +A+ ++EDM
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 204 IKSPDPPEELPFR 216
P+EL F+
Sbjct: 457 KGKECCPDELTFK 469
>TAIR|locus:2038451 [details] [associations]
symbol:AT1G63230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
UniGene:At.24672 EMBL:BT028924 IPI:IPI00536908 RefSeq:NP_176512.2
UniGene:At.49484 ProteinModelPortal:Q0IGJ6 SMR:Q0IGJ6 PRIDE:Q0IGJ6
EnsemblPlants:AT1G63230.1 GeneID:842628 KEGG:ath:AT1G63230
TAIR:At1g63230 eggNOG:NOG284567 InParanoid:Q0IGJ6 OMA:FTEMHDK
PhylomeDB:Q0IGJ6 ProtClustDB:CLSN2682583 Genevestigator:Q0IGJ6
Uniprot:Q0IGJ6
Length = 323
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 79 VILGLKRFKDDEEKLQ---KFIKTHVLRLLKMDIV---AVLIELERQEETILAVKIFDII 132
+I GL + D E L K +TH+ K +V A++ L + I A +F +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHI----KAHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102
Query: 133 RKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGS 192
+ + PD Y +I + R+G+ +A Q+ M + + PD T++ +I +K+G
Sbjct: 103 HDKGIF-PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 193 PADAMNIYEDMIK 205
++A IY DM++
Sbjct: 162 VSEAEEIYGDMLR 174
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 130 DIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLK 189
D+I +Q PD + LI AL + GK++EA +++ M + +FP + TY +I GF K
Sbjct: 136 DMIERQ--INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK 193
Query: 190 DGSPADAMNIYEDMIKSPDPPEELPF 215
DA + + M P+ + F
Sbjct: 194 QDRLNDAKRMLDSMASKSCSPDVVTF 219
>TAIR|locus:2170907 [details] [associations]
symbol:AT5G43820 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB026651 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00539499 RefSeq:NP_199195.4
UniGene:At.74492 ProteinModelPortal:P0C8R0 SMR:P0C8R0 PRIDE:P0C8R0
EnsemblPlants:AT5G43820.1 GeneID:834404 KEGG:ath:AT5G43820
TAIR:At5g43820 eggNOG:NOG329636 HOGENOM:HOG000083165 OMA:IWEEMQE
PhylomeDB:P0C8R0 ProtClustDB:CLSN2692668 Genevestigator:P0C8R0
Uniprot:P0C8R0
Length = 546
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 79 VILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAV--LIE-LERQEETILAVKIFDIIRKQ 135
+I G + + EE ++K +K V D ++ LIE L R +V+IFD I K
Sbjct: 261 MISGWSKLGEVEE-MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI-KH 318
Query: 136 DWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPAD 195
PDA +Y +I +E+M+ + M E+ P+ +TY++++ G +K +D
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 196 AMNIYEDMI 204
A+ I+E+M+
Sbjct: 379 ALEIFEEML 387
>TAIR|locus:2150024 [details] [associations]
symbol:AT5G01110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AL137189 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
EMBL:BT005783 EMBL:AK228473 IPI:IPI00547252 PIR:T45951
RefSeq:NP_195731.1 UniGene:At.33961 ProteinModelPortal:Q9LFC5
SMR:Q9LFC5 PaxDb:Q9LFC5 PRIDE:Q9LFC5 EnsemblPlants:AT5G01110.1
GeneID:831824 KEGG:ath:AT5G01110 TAIR:At5g01110
HOGENOM:HOG000115640 InParanoid:Q9LFC5 OMA:DLLIRTY PhylomeDB:Q9LFC5
ProtClustDB:CLSN2687095 Genevestigator:Q9LFC5 Uniprot:Q9LFC5
Length = 729
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 24/95 (25%), Positives = 56/95 (58%)
Query: 111 AVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRK 170
++L+E ++ + + K+F +R +D PD + ++ R+G +++A+ + S+++
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRD-VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIK 205
L PD+ YT +I+G+ + G + AMN+ +M++
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 127 KIFDIIRKQDWYQ----PDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTE 182
K F +++K + Q PD + Y ++ R +M EA V M + + PD TYT
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 183 VIRGFLKDGSPADAMNIYEDMIK---SPD 208
+I GF+ + +A I+++M++ SPD
Sbjct: 698 MINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>TAIR|locus:2206385 [details] [associations]
symbol:EMB2217 "embryo defective 2217" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC007202 Pfam:PF01535 TIGRFAMs:TIGR00756
SMART:SM00463 PROSITE:PS50828 Pfam:PF13041 EMBL:BX817051
IPI:IPI00547073 PIR:B96826 RefSeq:NP_178067.1 UniGene:At.50050
ProteinModelPortal:Q9SAK0 SMR:Q9SAK0 PaxDb:Q9SAK0 PRIDE:Q9SAK0
EnsemblPlants:AT1G79490.1 GeneID:844287 KEGG:ath:AT1G79490
GeneFarm:4808 TAIR:At1g79490 eggNOG:NOG239594 HOGENOM:HOG000241021
InParanoid:Q9SAK0 OMA:DQHIAWS PhylomeDB:Q9SAK0
ProtClustDB:CLSN2679841 Genevestigator:Q9SAK0 Uniprot:Q9SAK0
Length = 836
Score = 119 (46.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 138 YQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAM 197
++P A ++ LI + A+ GK++ A+++W+ M+K P+ YT +I K G AM
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 198 NIYEDMIKS 206
+++DM K+
Sbjct: 439 TVFKDMEKA 447
Score = 48 (22.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 108 DIVAVLIELERQEETILAVKIFDIIRKQDWYQPDAYIY 145
++V + L+ +E A+ +F +KQ WY P Y
Sbjct: 171 NMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECY 208
>TAIR|locus:2163218 [details] [associations]
symbol:AT5G61400 "AT5G61400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB010073 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
IPI:IPI00527760 RefSeq:NP_200948.1 UniGene:At.55661
ProteinModelPortal:Q9FLJ4 PRIDE:Q9FLJ4 EnsemblPlants:AT5G61400.1
GeneID:836261 KEGG:ath:AT5G61400 TAIR:At5g61400 eggNOG:NOG281238
HOGENOM:HOG000115648 InParanoid:Q9FLJ4 OMA:NTLINAC PhylomeDB:Q9FLJ4
ProtClustDB:CLSN2916547 Genevestigator:Q9FLJ4 Uniprot:Q9FLJ4
Length = 654
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 139 QPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMN 198
+P+ YIY I+ L R KM EA +++E M+K + P+ TY+ +I G+ K G+ A
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 199 IYEDMIKSPDPPEELPF 215
+Y++++ + P + F
Sbjct: 291 LYKEILVAELLPNVVVF 307
>TAIR|locus:2170538 [details] [associations]
symbol:AT5G40400 "AT5G40400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF12854
Pfam:PF13041 EMBL:AK227121 IPI:IPI00539547 RefSeq:NP_198856.2
UniGene:At.30286 ProteinModelPortal:Q9FND8 SMR:Q9FND8 PaxDb:Q9FND8
PRIDE:Q9FND8 EnsemblPlants:AT5G40400.1 GeneID:834038
KEGG:ath:AT5G40400 TAIR:At5g40400 eggNOG:NOG310965
HOGENOM:HOG000237947 InParanoid:Q9FND8 OMA:YCRKGRL PhylomeDB:Q9FND8
ProtClustDB:CLSN2702257 Genevestigator:Q9FND8 Uniprot:Q9FND8
Length = 610
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 127 KIFDIIRK--QDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
++ D + K ++ ++PD Y L+ + R G++ EA +++ M + + PD TYT +I
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 185 RGFLKDGSPADAMNIYEDMIKSPDPPE 211
+G KDG +A + M+ P+
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPD 340
>TAIR|locus:2203916 [details] [associations]
symbol:AT1G62590 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC005698 eggNOG:NOG320495 HOGENOM:HOG000015176
ProtClustDB:CLSN2682329 Pfam:PF12854 Pfam:PF13041 EMBL:AY136399
EMBL:AK221654 IPI:IPI00532416 PIR:F96651 RefSeq:NP_176447.1
UniGene:At.36146 ProteinModelPortal:Q9SXD8 SMR:Q9SXD8
EnsemblPlants:AT1G62590.1 GeneID:842556 KEGG:ath:AT1G62590
GeneFarm:4354 TAIR:At1g62590 InParanoid:Q9SXD8 OMA:QHITAST
PhylomeDB:Q9SXD8 Genevestigator:Q9SXD8 Uniprot:Q9SXD8
Length = 634
Score = 122 (48.0 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 85 RFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQEETILAVKIFDIIRKQDWYQPDAYI 144
R+ D + L I+ + L + A++ ++ + + A K++D + K+ PD +
Sbjct: 310 RWSDASQLLSDMIEKKINPNL-VTFNALIDAFVKEGKFVEAEKLYDDMIKRS-IDPDIFT 367
Query: 145 YKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDM 203
Y L+ ++++A Q++E M +D FPD TY +I+GF K D ++ +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A ++F+ + +D + PD Y LI ++ ++ + +++ M L D+ TYT +I
Sbjct: 384 AKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 185 RGFLKDGSPADAMNIYEDMIKSPDPPEELPFRI 217
+G DG +A +++ M+ PP+ + + I
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
>TAIR|locus:2174165 [details] [associations]
symbol:AT5G16640 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB008270 TIGRFAMs:TIGR00756 HOGENOM:HOG000015176 Pfam:PF12854
Pfam:PF13041 EMBL:AK228701 IPI:IPI00545439 RefSeq:NP_197167.1
UniGene:At.31655 ProteinModelPortal:Q9FMD3 SMR:Q9FMD3 PRIDE:Q9FMD3
EnsemblPlants:AT5G16640.1 GeneID:831526 KEGG:ath:AT5G16640
TAIR:At5g16640 eggNOG:NOG283736 InParanoid:Q9FMD3 OMA:CKAGEVA
PhylomeDB:Q9FMD3 ProtClustDB:CLSN2916229 Genevestigator:Q9FMD3
Uniprot:Q9FMD3
Length = 504
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 134 KQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSP 193
++D PD Y LI L +G+ ++A ++ M K +++PD T+ +I +K+G
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 194 ADAMNIYEDMIK-SPDP 209
++A YE+MI+ S DP
Sbjct: 273 SEAEEFYEEMIRRSLDP 289
>TAIR|locus:2164910 [details] [associations]
symbol:EMB2745 "EMBRYO DEFECTIVE 2745" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB016876 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB012243 eggNOG:NOG292283 Pfam:PF12854
Pfam:PF13041 IPI:IPI00544231 RefSeq:NP_198787.1 UniGene:At.55259
ProteinModelPortal:Q9FIX3 SMR:Q9FIX3 PaxDb:Q9FIX3 PRIDE:Q9FIX3
EnsemblPlants:AT5G39710.1 GeneID:833967 KEGG:ath:AT5G39710
TAIR:At5g39710 HOGENOM:HOG000084219 InParanoid:Q9FIX3 OMA:YSSLIQG
PhylomeDB:Q9FIX3 ProtClustDB:CLSN2687499 Genevestigator:Q9FIX3
Uniprot:Q9FIX3
Length = 747
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 23/82 (28%), Positives = 47/82 (57%)
Query: 134 KQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSP 193
K+ PD Y ++ R+ ++EA++V M ++ + PD+ TY+ +I+GF +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 194 ADAMNIYEDMIKSPDPPEELPF 215
+A ++YE+M++ PP+E +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTY 523
>TAIR|locus:2175443 [details] [associations]
symbol:AT5G04810 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] InterPro:IPR000504 InterPro:IPR011990
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL162972 EMBL:AB008271
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AF424618 EMBL:AK229672 IPI:IPI00537591 PIR:T48477
RefSeq:NP_568141.2 UniGene:At.20448 ProteinModelPortal:Q0WMY5
SMR:Q0WMY5 PaxDb:Q0WMY5 PRIDE:Q0WMY5 EnsemblPlants:AT5G04810.1
GeneID:830360 KEGG:ath:AT5G04810 TAIR:At5g04810 eggNOG:NOG243485
HOGENOM:HOG000241136 InParanoid:Q0WMY5 OMA:TLIKGWA PhylomeDB:Q0WMY5
ProtClustDB:CLSN2681028 Genevestigator:Q0WMY5 Uniprot:Q0WMY5
Length = 952
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 130 DIIR--KQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGF 187
D+I+ K++ +PD + Y I A ++ G MN A Q E M + P+ +TYT +I+G+
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 188 LKDGSPADAMNIYEDM 203
+ P A++ YE+M
Sbjct: 810 ARASLPEKALSCYEEM 825
>TAIR|locus:2171352 [details] [associations]
symbol:AT5G16420 "AT5G16420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005242
Gene3D:1.25.40.10 PROSITE:PS51375 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00547379 RefSeq:NP_197146.1 UniGene:At.54865
ProteinModelPortal:Q9FFE3 SMR:Q9FFE3 PRIDE:Q9FFE3
EnsemblPlants:AT5G16420.1 GeneID:831503 KEGG:ath:AT5G16420
TAIR:At5g16420 eggNOG:NOG250743 HOGENOM:HOG000241664
InParanoid:Q9FFE3 OMA:LIAGMCE PhylomeDB:Q9FFE3
ProtClustDB:CLSN2686156 Genevestigator:Q9FFE3 Uniprot:Q9FFE3
Length = 535
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A ++ + + + WY PDA Y L+ + G+ +EA V + M K ++ P+ TY +I
Sbjct: 245 AKRVLEEMLDRGWY-PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 185 RGFLKDGSPADAMNIYEDMIKSPDPPE 211
R K+ +A N++++M++ P+
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPD 330
>TAIR|locus:2095309 [details] [associations]
symbol:AT3G09060 "AT3G09060" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326 Pfam:PF12854
Pfam:PF13041 IPI:IPI00529232 RefSeq:NP_187518.1 UniGene:At.65072
ProteinModelPortal:Q9SS81 SMR:Q9SS81 PRIDE:Q9SS81
EnsemblPlants:AT3G09060.1 GeneID:820059 KEGG:ath:AT3G09060
TAIR:At3g09060 eggNOG:NOG274167 HOGENOM:HOG000238473
InParanoid:Q9SS81 OMA:PGIRSYN PhylomeDB:Q9SS81
ProtClustDB:CLSN2684970 Genevestigator:Q9SS81 Uniprot:Q9SS81
Length = 687
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 112 VLIELE-RQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRK 170
VLI++ +++E A D + K+ ++PD + Y +I LA+ GK+++A+++++ M +
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIK 205
+ PD Y +I GFLK+ AM +++ +++
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
>TAIR|locus:2151281 [details] [associations]
symbol:AT5G02860 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL162973 Pfam:PF01535
TIGRFAMs:TIGR00756 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000241317 ProtClustDB:CLSN2683067 IPI:IPI00538555
PIR:T48307 RefSeq:NP_195906.1 UniGene:At.54692
ProteinModelPortal:Q9LYZ9 SMR:Q9LYZ9 PaxDb:Q9LYZ9 PRIDE:Q9LYZ9
EnsemblPlants:AT5G02860.1 GeneID:831761 KEGG:ath:AT5G02860
TAIR:At5g02860 InParanoid:Q9LYZ9 OMA:NTLISCC PhylomeDB:Q9LYZ9
Genevestigator:Q9LYZ9 Uniprot:Q9LYZ9
Length = 819
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 138 YQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAM 197
+ P Y LI A AR G ++EAM++ M ++ PD TYT ++ GF + G AM
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 198 NIYEDM 203
+I+E+M
Sbjct: 405 SIFEEM 410
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 29/104 (27%), Positives = 56/104 (53%)
Query: 104 LLKMDIVAVLIELERQEETIL-AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAM 162
+L +VA++I + +E + A +F+ ++ +D + D Y Y LI A A +G+ EA+
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQ-EDGFSLDVYSYTSLISAFANSGRYREAV 228
Query: 163 QVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKS 206
V++ M ++ P TY ++ F K G+P + + + +KS
Sbjct: 229 NVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
>TAIR|locus:2083976 [details] [associations]
symbol:MEE40 "maternal effect embryo arrest 40"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA;IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132966 GO:GO:0009793
Gene3D:1.25.40.10 EMBL:AL132960 PROSITE:PS51375 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 EMBL:AY057573
IPI:IPI00517780 PIR:T45910 RefSeq:NP_190938.1 UniGene:At.20241
ProteinModelPortal:Q9LFF1 SMR:Q9LFF1 PaxDb:Q9LFF1 PRIDE:Q9LFF1
EnsemblPlants:AT3G53700.1 GeneID:824537 KEGG:ath:AT3G53700
TAIR:At3g53700 eggNOG:NOG327688 HOGENOM:HOG000240219
InParanoid:Q9LFF1 OMA:IVFRGLC PhylomeDB:Q9LFF1
ProtClustDB:CLSN2684936 Genevestigator:Q9LFF1 Uniprot:Q9LFF1
Length = 754
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A+ + QD + PD Y + L+ L + G + A+++ + M +E PD TY VI
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 185 RGFLKDGSPADAMNIYEDMIKSPDPPEELPF 215
G K G +A+ + + MI P + +
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Score = 115 (45.5 bits), Expect = 0.00077, P = 0.00077
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A++I D++ Q+ Y PD Y Y +I L + G++ EA++V + M D P++ TY +I
Sbjct: 314 AIEIMDVML-QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 185 RGFLKDGSPADAMNI 199
K+ +A +
Sbjct: 373 STLCKENQVEEATEL 387
>TAIR|locus:2163041 [details] [associations]
symbol:AT5G41170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
TIGRFAMs:TIGR00756 EMBL:AB010072 HOGENOM:HOG000015176 Pfam:PF12854
Pfam:PF13041 ProtClustDB:CLSN2686222 EMBL:BT023465 IPI:IPI00532071
RefSeq:NP_198933.1 UniGene:At.49775 ProteinModelPortal:Q9FLL3
SMR:Q9FLL3 PaxDb:Q9FLL3 PRIDE:Q9FLL3 EnsemblPlants:AT5G41170.1
GeneID:834119 KEGG:ath:AT5G41170 TAIR:At5g41170 eggNOG:NOG297645
InParanoid:Q9FLL3 OMA:VPPNIRT PhylomeDB:Q9FLL3
Genevestigator:Q9FLL3 Uniprot:Q9FLL3
Length = 527
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 91 EKLQKFIKTHVLRLLKMDIV---AVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKD 147
E+ + V +K D+V ++ L + A+ +FD + +PD +Y
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG-IRPDVVMYTS 217
Query: 148 LIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSP 207
L+ L +G+ +A + M K + PD T+ +I F+K+G DA +Y +MI+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 208 DPP 210
P
Sbjct: 278 IAP 280
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 125 AVKIFDIIRKQ--DWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTE 182
A+ IF+ ++K+ D P+ + Y L+ L GK+ +A+ V+E MRK ++ TYT
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 183 VIRGFLKDGSPADAMNIY 200
+I+G K G +A+N++
Sbjct: 466 IIQGMCKAGKVKNAVNLF 483
>TAIR|locus:2161408 [details] [associations]
symbol:AT5G46100 "AT5G46100" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB006698 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00523376 RefSeq:NP_199422.1 UniGene:At.65644
ProteinModelPortal:Q9FNL2 SMR:Q9FNL2 EnsemblPlants:AT5G46100.1
GeneID:834651 KEGG:ath:AT5G46100 TAIR:At5g46100 eggNOG:NOG314922
HOGENOM:HOG000006371 InParanoid:Q9FNL2 OMA:SYTYGTL PhylomeDB:Q9FNL2
ProtClustDB:CLSN2686165 Genevestigator:Q9FNL2 Uniprot:Q9FNL2
Length = 472
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 112 VLIE-LERQEETILA-VKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMR 169
VLI+ L R + T+ A +KIF + K+ PD+Y Y LI L R G+++EA +++ M
Sbjct: 161 VLIKALCRNDGTVDAGLKIFLEMPKRGC-DPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 170 KEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDM 203
++D P TYT +I G + +AM E+M
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
>TAIR|locus:2116772 [details] [associations]
symbol:PGR3 "AT4G31850" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0000272
"polysaccharide catabolic process" evidence=RCA] [GO:0005982
"starch metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0046777 "protein autophosphorylation" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161579 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL049607
UniGene:At.24222 UniGene:At.66570 eggNOG:NOG320495 Pfam:PF12854
Pfam:PF13041 IPI:IPI00517379 PIR:T06307 RefSeq:NP_194913.1
ProteinModelPortal:Q9SZ52 SMR:Q9SZ52 STRING:Q9SZ52 PaxDb:Q9SZ52
PRIDE:Q9SZ52 EnsemblPlants:AT4G31850.1 GeneID:829314
KEGG:ath:AT4G31850 TAIR:At4g31850 HOGENOM:HOG000005824
InParanoid:Q9SZ52 OMA:TICIRVL PhylomeDB:Q9SZ52
ProtClustDB:CLSN2685984 Genevestigator:Q9SZ52 Uniprot:Q9SZ52
Length = 1112
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 109 IVAVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESM 168
I+ L + R EE ++ +F+ ++ PD Y Y LI+ L G + EA +++ +
Sbjct: 1002 IINGLGKSHRLEEALV---LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 169 RKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIK---SPDPP--EELPFR 216
++ L P+ T+ +IRG+ G P A +Y+ M+ SP+ E+LP R
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
>TAIR|locus:2015218 [details] [associations]
symbol:AT1G63070 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC010795 eggNOG:NOG320495
HOGENOM:HOG000015176 Pfam:PF12854 Pfam:PF13041 EMBL:DQ446390
IPI:IPI00533927 IPI:IPI00896804 PIR:A96656 RefSeq:NP_176495.1
UniGene:At.52333 ProteinModelPortal:Q9CAN6 SMR:Q9CAN6 ProMEX:Q9CAN6
EnsemblPlants:AT1G63070.1 GeneID:842610 KEGG:ath:AT1G63070
GeneFarm:4780 TAIR:At1g63070 InParanoid:Q9CAN6 OMA:WITKINT
PhylomeDB:Q9CAN6 Genevestigator:Q9CAN6 Uniprot:Q9CAN6
Length = 590
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 129 FDIIRKQDW--YQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRG 186
FD+ K + +PD + Y LI L G+ ++A ++ M ++++ PD + +I
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 187 FLKDGSPADAMNIYEDMIKS 206
F+K+G +A +Y++M+KS
Sbjct: 330 FVKEGKLVEAEKLYDEMVKS 349
>TAIR|locus:2035206 [details] [associations]
symbol:AT1G52640 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC008016 eggNOG:NOG292283 Pfam:PF12854
Pfam:PF13041 EMBL:AK221591 EMBL:BT012287 IPI:IPI00520826 PIR:C96567
RefSeq:NP_175673.1 UniGene:At.49489 ProteinModelPortal:Q9SSR6
SMR:Q9SSR6 PRIDE:Q9SSR6 EnsemblPlants:AT1G52640.1 GeneID:841696
KEGG:ath:AT1G52640 GeneFarm:4331 TAIR:At1g52640
HOGENOM:HOG000006344 InParanoid:Q9SSR6 OMA:VLKRCKN PhylomeDB:Q9SSR6
ProtClustDB:CLSN2679739 Genevestigator:Q9SSR6 Uniprot:Q9SSR6
Length = 523
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 140 PDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFL-KDGSPADAMN 198
PD + Y ++ L R G+ + A ++WE M + +P TYT +I G + K G +A
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 199 IYEDMIKSPDPP 210
+E MI PP
Sbjct: 441 YFEMMIDEGIPP 452
>TAIR|locus:2133352 [details] [associations]
symbol:AT4G01570 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AF096370 EMBL:AL161492
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AF104919 Pfam:PF13041
EMBL:AY065015 EMBL:BT001133 IPI:IPI00520540 PIR:D85020 PIR:T01937
RefSeq:NP_192066.2 UniGene:At.28284 UniGene:At.66612
ProteinModelPortal:Q8VZE4 SMR:Q8VZE4 PaxDb:Q8VZE4 PRIDE:Q8VZE4
EnsemblPlants:AT4G01570.1 GeneID:828133 KEGG:ath:AT4G01570
TAIR:At4g01570 eggNOG:NOG271483 HOGENOM:HOG000240365
InParanoid:Q8VZE4 OMA:DICTYNS PhylomeDB:Q8VZE4
ProtClustDB:CLSN2680942 Genevestigator:Q8VZE4 Uniprot:Q8VZE4
Length = 805
Score = 108 (43.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 138 YQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAM 197
+ PD Y LI L GK +A+ VW+ ++ PD+ TY +I+G K DAM
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 198 NIYEDM 203
IY +M
Sbjct: 345 RIYGEM 350
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 3 TRLFSRSKIPILASIVLQNLTKN---PSKNFSF 32
TR + IPI +VLQ L +N PSK F
Sbjct: 45 TRSLDANSIPISEPVVLQILRRNSIDPSKKLDF 77
>TAIR|locus:2119747 [details] [associations]
symbol:EMB1025 "embryo defective 1025" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021637 EMBL:AL161552
GO:GO:0009793 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AY864350 IPI:IPI00531732
PIR:H85227 PIR:T04893 RefSeq:NP_193742.1 UniGene:At.65409
ProteinModelPortal:O49436 SMR:O49436 EnsemblPlants:AT4G20090.1
GeneID:827754 KEGG:ath:AT4G20090 TAIR:At4g20090 eggNOG:NOG310719
HOGENOM:HOG000005779 InParanoid:O49436 OMA:MLAKYIV PhylomeDB:O49436
ProtClustDB:CLSN2685733 Genevestigator:O49436 Uniprot:O49436
Length = 660
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 116 LERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFP 175
L +Q AV++ + ++ Y + +IY LI L + GK EAM +W M ++ P
Sbjct: 337 LVKQRRATDAVRLLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 395
Query: 176 DSQTYTEVIRGFLKDGSPADAMNIYEDMIKS 206
+ Y+ ++ G ++G P +A I MI S
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 28/103 (27%), Positives = 57/103 (55%)
Query: 105 LKMDIVAVLIE-LERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQ 163
L I +VLI L ++ + A+ ++ + ++ +P+ +Y L+ L R GK NEA +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 164 VWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKS 206
+ M P++ TY+ +++GF K G +A+ ++++M K+
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
>TAIR|locus:2014759 [details] [associations]
symbol:FAC19 "AT1G13800" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009790 "embryo development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009790 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC068197
Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197 HOGENOM:HOG000090566
ProtClustDB:CLSN2913640 IPI:IPI00536847 RefSeq:NP_172835.1
UniGene:At.65910 ProteinModelPortal:Q9LMH5 SMR:Q9LMH5 PRIDE:Q9LMH5
EnsemblPlants:AT1G13800.1 GeneID:837941 KEGG:ath:AT1G13800
GeneFarm:4841 TAIR:At1g13800 InParanoid:Q9LMH5 OMA:YTIMINT
PhylomeDB:Q9LMH5 Genevestigator:Q9LMH5 Uniprot:Q9LMH5
Length = 883
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 35/130 (26%), Positives = 65/130 (50%)
Query: 88 DDEEKLQKFIKTHVLRLLKMDIVAVLIELERQEETILA--VKIFDIIRKQDWYQPDAYIY 145
+D +K+ K R + D+V + L+ + E L+ +K FD+ +PD + Y
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDV-------KPDVFYY 764
Query: 146 KDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIK 205
LI + G + EA ++++ M + + PD+ YT +I K G +A I++ MI+
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824
Query: 206 SPDPPEELPF 215
S P+ +P+
Sbjct: 825 SGVKPDVVPY 834
>TAIR|locus:2144915 [details] [associations]
symbol:AT5G18950 "AT5G18950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006259 "DNA metabolic process" evidence=RCA]
[GO:0007059 "chromosome segregation" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0007131
"reciprocal meiotic recombination" evidence=RCA] [GO:0009410
"response to xenobiotic stimulus" evidence=RCA] [GO:0010332
"response to gamma radiation" evidence=RCA] [GO:0032204 "regulation
of telomere maintenance" evidence=RCA] [GO:0032504 "multicellular
organism reproduction" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC068655
Pfam:PF13041 EMBL:AK117517 IPI:IPI00545889 RefSeq:NP_197396.1
UniGene:At.31356 ProteinModelPortal:Q8GYM2 PaxDb:Q8GYM2
PRIDE:Q8GYM2 EnsemblPlants:AT5G18950.1 GeneID:832013
KEGG:ath:AT5G18950 TAIR:At5g18950 eggNOG:NOG263043
HOGENOM:HOG000115642 OMA:KLISGFC PhylomeDB:Q8GYM2
ProtClustDB:CLSN2686746 Genevestigator:Q8GYM2 Uniprot:Q8GYM2
Length = 483
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 137 W-YQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPAD 195
W + P YIY+ +I L K EA ++++++ + PD YT +IRGF + G
Sbjct: 277 WNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGS 336
Query: 196 AMNIYEDMIKSPDPPEELPFRI 217
A ++ +MIK P E + +
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNV 358
>TAIR|locus:2204913 [details] [associations]
symbol:AT1G02420 "AT1G02420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR PROSITE:PS51375 EMBL:AC064879
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00538844
PIR:F86154 RefSeq:NP_171744.1 UniGene:At.42602 UniGene:At.51456
ProteinModelPortal:Q9FZ19 SMR:Q9FZ19 EnsemblPlants:AT1G02420.1
GeneID:837779 KEGG:ath:AT1G02420 GeneFarm:4843 TAIR:At1g02420
eggNOG:NOG245066 HOGENOM:HOG000239841 InParanoid:Q9FZ19 OMA:SMSDARN
PhylomeDB:Q9FZ19 ProtClustDB:CLSN2679341 Genevestigator:Q9FZ19
Uniprot:Q9FZ19
Length = 491
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 78 FVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAV--LIELERQEETI-LAVKIFDIIRK 134
F IL L +K EE + F + + LK D+V LI++ ++ I A K+ D +R+
Sbjct: 217 FNIL-LSGWKSSEEA-EAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 274
Query: 135 QDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPA 194
++ PD Y +I L G+ ++A +V + M++ +PD Y IR F
Sbjct: 275 EE-ETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLG 333
Query: 195 DAMNIYEDMIKSPDPPEELPFRI 217
DA + ++M+K P + +
Sbjct: 334 DADKLVDEMVKKGLSPNATTYNL 356
>TAIR|locus:2015494 [details] [associations]
symbol:RPF3 "RNA processing factor 3" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006397 "mRNA processing" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507 EMBL:AC011000
GO:GO:0006397 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812
TIGRFAMs:TIGR00756 eggNOG:NOG320495 HOGENOM:HOG000015176
ProtClustDB:CLSN2682329 Pfam:PF12854 Pfam:PF13041 EMBL:AY056104
IPI:IPI00518937 PIR:H96653 RefSeq:NP_176481.2 UniGene:At.70258
ProteinModelPortal:Q9LQ14 SMR:Q9LQ14 EnsemblPlants:AT1G62930.1
GeneID:842594 KEGG:ath:AT1G62930 GeneFarm:4779 TAIR:At1g62930
InParanoid:Q9LQ14 OMA:YSMLINC PhylomeDB:Q9LQ14
Genevestigator:Q9LQ14 Uniprot:Q9LQ14
Length = 629
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 111 AVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRK 170
A++ ++ + + A K++D + K+ PD + Y LI +++EA ++E M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDM 203
+D FP+ TY +I+GF K + M ++ +M
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
>TAIR|locus:2024537 [details] [associations]
symbol:AT1G64100 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC007764 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000015176 Pfam:PF12854
Pfam:PF13041 EMBL:DQ446393 IPI:IPI00542030 IPI:IPI00896797
PIR:F96665 RefSeq:NP_564822.1 UniGene:At.36047
ProteinModelPortal:Q9SH60 SMR:Q9SH60 PaxDb:Q9SH60
EnsemblPlants:AT1G64100.1 GeneID:842714 KEGG:ath:AT1G64100
GeneFarm:4790 TAIR:At1g64100 eggNOG:KOG4197 InParanoid:Q9SH60
ProtClustDB:CLSN2689016 ArrayExpress:Q9SH60 Genevestigator:Q9SH60
Uniprot:Q9SH60
Length = 666
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 130 DIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLK 189
D+I ++ PD + LI A + GK+ EA ++ + M +FPD+ TY +I GF K
Sbjct: 356 DMIERE--INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 190 DGSPADAMNIYEDMIKSPD 208
DA +++ D++ SPD
Sbjct: 414 HNRFDDAKHMF-DLMASPD 431
>TAIR|locus:2098495 [details] [associations]
symbol:AT3G07290 "AT3G07290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
EMBL:AC012395 IPI:IPI00539964 RefSeq:NP_187385.1 UniGene:At.65069
ProteinModelPortal:Q9SFV9 SMR:Q9SFV9 PaxDb:Q9SFV9 PRIDE:Q9SFV9
EnsemblPlants:AT3G07290.1 GeneID:819917 KEGG:ath:AT3G07290
TAIR:At3g07290 HOGENOM:HOG000115627 InParanoid:Q9SFV9 OMA:NALCKNG
PhylomeDB:Q9SFV9 ProtClustDB:CLSN2684833 Genevestigator:Q9SFV9
Uniprot:Q9SFV9
Length = 880
Score = 116 (45.9 bits), Expect = 0.00071, P = 0.00071
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A+K+FD++ K+ P++ Y LI L G++ EA + + M ++ P ++TYT +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 185 RGFLKDGSPADAMNIYEDMI 204
+ G A N++++MI
Sbjct: 309 KALCDRGLIDKAFNLFDEMI 328
>TAIR|locus:2039415 [details] [associations]
symbol:AT2G16880 "AT2G16880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005167 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
EMBL:AY072079 EMBL:AY096663 IPI:IPI00543040 PIR:D84545
RefSeq:NP_179280.1 UniGene:At.40223 ProteinModelPortal:Q9ZVX5
SMR:Q9ZVX5 IntAct:Q9ZVX5 PaxDb:Q9ZVX5 PRIDE:Q9ZVX5
EnsemblPlants:AT2G16880.1 GeneID:816189 KEGG:ath:AT2G16880
TAIR:At2g16880 eggNOG:NOG304367 HOGENOM:HOG000239828
InParanoid:Q9ZVX5 OMA:DVVTCNT PhylomeDB:Q9ZVX5
ProtClustDB:CLSN2683765 Genevestigator:Q9ZVX5 Uniprot:Q9ZVX5
Length = 743
Score = 115 (45.5 bits), Expect = 0.00075, P = 0.00075
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 118 RQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDS 177
R+E+ A++++D ++K P + LI L GK AM+ ++ + + L PD
Sbjct: 498 REEKVEKALEMWDEMKKVK-ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 178 QTYTEVIRGFLKDGSPADAMNIYEDMIKSPDPPE 211
T+ +I G+ K+G A Y + IK P+
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
>TAIR|locus:2015228 [details] [associations]
symbol:AT1G63080 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 TIGRFAMs:TIGR00756
EMBL:AC010795 UniGene:At.64076 eggNOG:NOG320495
HOGENOM:HOG000015176 ProtClustDB:CLSN2682329 Pfam:PF12854
Pfam:PF13041 EMBL:AK226724 IPI:IPI00532406 PIR:B96656
RefSeq:NP_176496.1 ProteinModelPortal:Q9CAN5 SMR:Q9CAN5
PRIDE:Q9CAN5 EnsemblPlants:AT1G63080.1 GeneID:842611
KEGG:ath:AT1G63080 GeneFarm:4781 TAIR:At1g63080 InParanoid:Q9CAN5
OMA:DTICYSA PhylomeDB:Q9CAN5 Genevestigator:Q9CAN5 Uniprot:Q9CAN5
Length = 614
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 118 RQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDS 177
++ + I A K+FD + ++ P+ Y LI +++EA Q++ M +D PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 178 QTYTEVIRGFLKDGSPADAMNIYEDM 203
TY +I GF K D M ++ DM
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDM 406
>TAIR|locus:2015208 [details] [associations]
symbol:AT1G63130 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC010795 eggNOG:NOG320495
HOGENOM:HOG000015176 ProtClustDB:CLSN2682329 Pfam:PF12854
Pfam:PF13041 EMBL:AY128387 EMBL:BT000125 IPI:IPI00517647 PIR:G96656
RefSeq:NP_176501.1 UniGene:At.36174 ProteinModelPortal:Q9CAN0
SMR:Q9CAN0 IntAct:Q9CAN0 PaxDb:Q9CAN0 PRIDE:Q9CAN0
EnsemblPlants:AT1G63130.1 GeneID:842617 KEGG:ath:AT1G63130
GeneFarm:4782 TAIR:At1g63130 InParanoid:Q9CAN0 OMA:ARECDNA
PhylomeDB:Q9CAN0 Genevestigator:Q9CAN0 Uniprot:Q9CAN0
Length = 630
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 111 AVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRK 170
A++ ++ + + A K++D + K+ PD + Y LI +++EA ++E M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDM 203
+D FP+ TY +I+GF K + M ++ +M
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
>TAIR|locus:2097395 [details] [associations]
symbol:AT3G49730 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009691 "cytokinin
biosynthetic process" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132965 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 IPI:IPI00542384
PIR:T46039 RefSeq:NP_190542.4 UniGene:At.35574
ProteinModelPortal:P0C8A0 SMR:P0C8A0 EnsemblPlants:AT3G49730.1
GeneID:824135 KEGG:ath:AT3G49730 TAIR:At3g49730 eggNOG:NOG325313
HOGENOM:HOG000240213 PhylomeDB:P0C8A0 ProtClustDB:CLSN2686644
Genevestigator:P0C8A0 Uniprot:P0C8A0
Length = 638
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 24/94 (25%), Positives = 55/94 (58%)
Query: 112 VLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALA-RTGKMNEAMQVWESMRK 170
+++ E++E+ +++ + ++++ + PD IY +++I LA + G++ EA+++W M
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCH-PDLLIY-NVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMI 204
L P T+ +I GF G +A N +++M+
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 34/144 (23%), Positives = 75/144 (52%)
Query: 74 KEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIVAVLIELERQEETIL-AVKIFDII 132
K + ++ +++F +++ KT+ L++ ++ VL+ + AV++ D +
Sbjct: 135 KSMVMILSKMRQFGAVWGLIEEMRKTNP-ELIEPELFVVLMRRFASANMVKKAVEVLDEM 193
Query: 133 RKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTY-TEVIRGFLKDG 191
K +PD Y++ L+ AL + G + EA +V+E MR++ FP + Y T ++ G+ ++G
Sbjct: 194 PKYG-LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK--FPPNLRYFTSLLYGWCREG 250
Query: 192 SPADAMNIYEDMIKSPDPPEELPF 215
+A + M ++ P+ + F
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVF 274
>TAIR|locus:2026207 [details] [associations]
symbol:AT1G62680 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC007190
TIGRFAMs:TIGR00756 HOGENOM:HOG000015176 Pfam:PF12854 Pfam:PF13041
EMBL:AK226633 IPI:IPI00517155 RefSeq:NP_176455.2 UniGene:At.66080
ProteinModelPortal:Q3ECK2 SMR:Q3ECK2 PRIDE:Q3ECK2
EnsemblPlants:AT1G62680.1 GeneID:842565 KEGG:ath:AT1G62680
GeneFarm:4356 TAIR:At1g62680 eggNOG:NOG324939 InParanoid:Q3ECK2
OMA:FNIVINC PhylomeDB:Q3ECK2 ProtClustDB:CLSN2920242
Genevestigator:Q3ECK2 Uniprot:Q3ECK2
Length = 548
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 138 YQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAM 197
Y+PD Y +I +L +T ++N+A ++ + ++ + P+ TYT ++ G +DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 198 NIYEDMIKSPDPPEELPF 215
+ DMIK P + +
Sbjct: 246 RLLSDMIKKKITPNVITY 263
>TAIR|locus:2198005 [details] [associations]
symbol:AT1G26460 "AT1G26460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 EMBL:AC013427
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 EMBL:AY081336 EMBL:AY128828 EMBL:AY084844
IPI:IPI00527048 PIR:D86391 RefSeq:NP_564247.1 UniGene:At.24945
ProteinModelPortal:Q9FZD1 SMR:Q9FZD1 IntAct:Q9FZD1 STRING:Q9FZD1
PaxDb:Q9FZD1 PRIDE:Q9FZD1 EnsemblPlants:AT1G26460.1 GeneID:839187
KEGG:ath:AT1G26460 GeneFarm:4852 TAIR:At1g26460 eggNOG:NOG319572
HOGENOM:HOG000115668 InParanoid:Q9FZD1 OMA:YNHYLRA PhylomeDB:Q9FZD1
ProtClustDB:CLSN2687975 Genevestigator:Q9FZD1 Uniprot:Q9FZD1
Length = 630
Score = 100 (40.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A + F+ I P+ Y L+ A + K EA V+E + + PDS+TY+ ++
Sbjct: 488 AYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSLLV 547
Query: 185 RGFLKDGSPADAMNIYEDMIKSP-DPPEE 212
L + P A+ + +DMIK+ +P E
Sbjct: 548 DAHLINRDPKSALTVVDDMIKAGFEPSRE 576
Score = 55 (24.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 1 MATRLFSRSKIPILASIVLQNLTK-NPSKNFSFLAFKPKSPIV--DFVAHEP 49
MA+ LF+RS+I +L ++ T +P + S F + P++ + H+P
Sbjct: 1 MASHLFTRSRISLLKTLKPNPFTSASPIRAISGTPFLSQDPLLATESTDHDP 52
>TAIR|locus:2009620 [details] [associations]
symbol:AT1G53330 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC008007 GO:GO:0048364 GO:GO:0009790 PROSITE:PS51375
GO:GO:0010154 GO:GO:0048367 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 Pfam:PF13041 IPI:IPI00523997 PIR:E96573
RefSeq:NP_175740.1 UniGene:At.66016 ProteinModelPortal:Q9MAG8
SMR:Q9MAG8 EnsemblPlants:AT1G53330.1 GeneID:841768
KEGG:ath:AT1G53330 GeneFarm:4332 TAIR:At1g53330 eggNOG:NOG254458
HOGENOM:HOG000070869 InParanoid:Q9MAG8 OMA:ACTYNIL PhylomeDB:Q9MAG8
ProtClustDB:CLSN2679807 Genevestigator:Q9MAG8 Uniprot:Q9MAG8
Length = 471
Score = 112 (44.5 bits), Expect = 0.00089, P = 0.00089
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 141 DAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNIY 200
DA IY LI +L + G+ NE + E M ++ PD+ TY +I GF + A +
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 201 EDMIKSPDPPEELPFRI 217
++M++ P+ + + +
Sbjct: 317 DEMVEKGLKPDVISYNM 333
>TAIR|locus:2077637 [details] [associations]
symbol:AT3G06920 "AT3G06920" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC016827 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
IPI:IPI00544113 RefSeq:NP_187348.1 UniGene:At.53208
ProteinModelPortal:Q9M907 SMR:Q9M907 PaxDb:Q9M907 PRIDE:Q9M907
EnsemblPlants:AT3G06920.1 GeneID:819877 KEGG:ath:AT3G06920
TAIR:At3g06920 eggNOG:NOG283339 HOGENOM:HOG000242227
InParanoid:Q9M907 OMA:TPNVYTW PhylomeDB:Q9M907
ProtClustDB:CLSN2684804 Genevestigator:Q9M907 Uniprot:Q9M907
Length = 871
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 140 PDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNI 199
PD + LI L + G++++A +V+E M D +S YT +I+ F G D I
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 200 YEDMIK---SPD 208
Y+DMI SPD
Sbjct: 505 YKDMINQNCSPD 516
>TAIR|locus:2024296 [details] [associations]
symbol:AT1G09900 "AT1G09900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016020 Gene3D:1.25.40.10
PROSITE:PS51375 TIGRFAMs:TIGR00756 EMBL:AC000132 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000238342 IPI:IPI00520780
RefSeq:NP_172461.1 UniGene:At.51542 ProteinModelPortal:Q3EDF8
SMR:Q3EDF8 PaxDb:Q3EDF8 PRIDE:Q3EDF8 EnsemblPlants:AT1G09900.1
GeneID:837522 KEGG:ath:AT1G09900 GeneFarm:4819 TAIR:At1g09900
eggNOG:NOG276873 InParanoid:Q3EDF8 OMA:INFLCRK PhylomeDB:Q3EDF8
ProtClustDB:CLSN2679516 Genevestigator:Q3EDF8 Uniprot:Q3EDF8
Length = 598
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 140 PDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNI 199
PD Y ++ +L +GK+ +AM+V + M + D +PD TYT +I +D AM +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 200 YEDMIKSPDPPEELPFRI 217
++M P+ + + +
Sbjct: 262 LDEMRDRGCTPDVVTYNV 279
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 112 VLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKE 171
V+ L + +T A+K+ D +R +D +PD Y L+ L+R GK++EA++ + +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKD-LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 172 DLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSPDPPEELPFRI 217
+ P++ T+ ++ G K A++ MI P E + I
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
>TAIR|locus:2084978 [details] [associations]
symbol:AT3G04760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AY056218 EMBL:AY133775 EMBL:AK221573
IPI:IPI00532561 RefSeq:NP_566237.1 UniGene:At.18557
ProteinModelPortal:Q9SR00 SMR:Q9SR00 STRING:Q9SR00 PaxDb:Q9SR00
PRIDE:Q9SR00 EnsemblPlants:AT3G04760.1 GeneID:819636
KEGG:ath:AT3G04760 TAIR:At3g04760 eggNOG:NOG279361
HOGENOM:HOG000238342 InParanoid:Q9SR00 OMA:NTMFSAL PhylomeDB:Q9SR00
ProtClustDB:CLSN2688070 Genevestigator:Q9SR00 Uniprot:Q9SR00
Length = 602
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 140 PDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVIRGFLKDGSPADAMNI 199
PD Y +I L R G ++EA ++ MR + P TY V+ GF K DA+N+
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 200 YEDMIKSPDPPEELPFRI 217
E M+ + P E + +
Sbjct: 531 LESMVGNGCRPNETTYTV 548
>TAIR|locus:2089388 [details] [associations]
symbol:AT3G16710 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB022217 Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000015176
Pfam:PF12854 Pfam:PF13041 IPI:IPI00525605 RefSeq:NP_188293.2
UniGene:At.53339 ProteinModelPortal:Q9LUR2 SMR:Q9LUR2 PRIDE:Q9LUR2
EnsemblPlants:AT3G16710.1 GeneID:820923 KEGG:ath:AT3G16710
TAIR:At3g16710 eggNOG:NOG319394 InParanoid:Q9LUR2 OMA:VANTITY
PhylomeDB:Q9LUR2 ProtClustDB:CLSN2686222 Genevestigator:Q9LUR2
Uniprot:Q9LUR2
Length = 507
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 125 AVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRKEDLFPDSQTYTEVI 184
A ++++++ + Y PD + Y LI L G ++EA Q++ M + +P+ YT +I
Sbjct: 277 AKELYNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 185 RGFLKDGSPADAMNIYEDM 203
GF K D M I+ +M
Sbjct: 336 HGFCKSKRVEDGMKIFYEM 354
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 256 245 0.00099 113 3 11 22 0.41 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 587 (62 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.49u 0.15s 22.64t Elapsed: 00:00:01
Total cpu time: 22.50u 0.15s 22.65t Elapsed: 00:00:01
Start: Thu May 9 22:09:39 2013 End: Thu May 9 22:09:40 2013