Query 025228
Match_columns 256
No_of_seqs 202 out of 2017
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 06:12:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025228.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025228hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ve3_A Putative cytochrome P45 100.0 2.2E-28 7.7E-33 200.8 18.1 209 28-248 7-217 (444)
2 3ld6_A Lanosterol 14-alpha dem 100.0 1.5E-27 5E-32 196.9 17.3 208 33-250 11-228 (461)
3 3i3k_A Lanosterol 14-alpha dem 99.9 2.4E-26 8.2E-31 189.6 17.4 211 28-249 6-227 (461)
4 3s79_A Cytochrome P450 19A1; o 99.9 4.1E-26 1.4E-30 190.2 18.7 158 31-192 43-210 (503)
5 3nxu_A Cytochrome P450 3A4; al 99.9 4.2E-27 1.4E-31 195.3 12.6 155 31-192 12-173 (485)
6 3k9v_A 1,25-dihydroxyvitamin D 99.9 3E-26 1E-30 189.9 17.0 179 26-206 17-215 (482)
7 3e6i_A CYPIIE1, P450-J, cytoch 99.9 4.8E-26 1.6E-30 188.5 17.6 159 27-191 4-169 (476)
8 3gw9_A Sterol 14alpha-demethyl 99.9 1.4E-25 4.9E-30 184.4 17.9 205 32-247 2-222 (450)
9 3qz1_A Steroid 21-hydroxylase; 99.9 1.2E-26 3.9E-31 193.2 11.0 206 28-248 24-246 (496)
10 2fdv_A Cytochrome P450 2A6; CY 99.9 1.2E-25 4.1E-30 186.2 15.9 157 30-191 7-170 (476)
11 3dbg_A Putative cytochrome P45 99.9 8.5E-26 2.9E-30 186.6 14.2 205 32-249 22-238 (467)
12 3swz_A Steroid 17-alpha-hydrox 99.9 1.1E-25 3.7E-30 187.3 14.8 158 30-191 5-171 (494)
13 1po5_A Cytochrome P450 2B4; ox 99.9 3.9E-25 1.3E-29 183.1 16.7 156 31-191 8-170 (476)
14 3czh_A Cytochrome P450 2R1; vi 99.9 1.4E-24 4.9E-29 179.9 19.4 210 30-248 9-241 (481)
15 1r9o_A Cytochrome P450 2C9; mo 99.9 3.8E-25 1.3E-29 183.2 15.7 172 29-205 7-188 (477)
16 2cib_A Cytochrome P450 51; hem 99.9 4.9E-25 1.7E-29 181.5 15.6 205 33-249 4-216 (455)
17 2hi4_A Cytochrome P450 1A2; CY 99.9 8.9E-25 3.1E-29 181.8 16.6 210 29-248 12-250 (495)
18 3tbg_A Cytochrome P450 2D6; mo 99.9 6.1E-25 2.1E-29 182.0 15.4 163 26-192 3-175 (479)
19 3pm0_A Cypib1, cytochrome P450 99.9 8.6E-25 2.9E-29 182.4 16.3 157 29-191 5-175 (507)
20 3v8d_A Cholesterol 7-alpha-mon 99.9 8.2E-26 2.8E-30 187.9 9.6 213 27-249 7-236 (491)
21 3n9y_A Cholesterol SIDE-chain 99.9 1.8E-23 6.3E-28 173.5 19.2 176 28-206 4-202 (487)
22 2ij2_A Cytochrome P450 BM3; mo 99.9 1E-23 3.6E-28 174.2 16.3 151 33-191 3-163 (470)
23 2cd8_A Cytochrome P450 monooxy 99.9 7.5E-23 2.6E-27 167.4 19.1 194 32-249 25-229 (436)
24 1izo_A P450bsbeta, cytochrome 99.9 1.5E-22 5.1E-27 164.9 19.1 190 41-248 8-204 (417)
25 1n97_A CYP175A1; electron tran 99.9 1.8E-23 6E-28 168.8 11.8 155 37-204 3-160 (389)
26 3awm_A Fatty acid alpha-hydrox 99.9 3.9E-22 1.3E-26 162.3 19.1 193 35-248 4-203 (415)
27 1ued_A P450 OXYC, P450 monooxy 99.9 1.5E-20 5.1E-25 152.5 15.8 190 31-249 8-214 (406)
28 3dsk_A Cytochrome P450 74A, ch 99.9 8E-21 2.7E-25 158.0 14.5 162 28-192 23-205 (495)
29 1jfb_A Nitric-oxide reductase 99.9 3.3E-20 1.1E-24 150.5 17.5 149 34-192 2-164 (404)
30 3dax_A Cytochrome P450 7A1; ch 99.8 2.7E-21 9.3E-26 160.6 10.6 158 27-191 7-176 (491)
31 1cpt_A Cytochrome P450-TERP; o 99.8 2.5E-20 8.4E-25 152.3 14.8 208 31-249 4-234 (428)
32 2jjn_A Cytochrome P450 113A1; 99.8 3.3E-20 1.1E-24 150.7 14.6 200 18-249 6-208 (411)
33 3ivy_A Cytochrome P450 CYP125; 99.8 1.6E-19 5.4E-24 147.7 17.2 198 32-249 17-235 (433)
34 3mdm_A Cholesterol 24-hydroxyl 99.8 2.4E-19 8.2E-24 147.6 18.2 185 57-247 10-215 (456)
35 1s1f_A Putative cytochrome P45 99.8 2.9E-19 1E-23 144.9 18.0 190 33-249 8-210 (406)
36 2zbx_A Cytochrome P450-SU1; be 99.8 2.6E-19 9E-24 145.4 17.0 192 33-249 5-211 (412)
37 3dan_A Cytochrome P450 74A2; A 99.8 1.7E-19 5.9E-24 149.1 15.2 161 29-192 5-187 (473)
38 2zwu_A Camphor 5-monooxygenase 99.8 1.5E-19 5.2E-24 146.9 14.3 200 28-249 6-216 (415)
39 3b6h_A Prostacyclin synthase; 99.8 2.1E-19 7.1E-24 149.6 14.7 154 27-190 12-175 (498)
40 3b98_A Prostaglandin I2 syntha 99.8 8.8E-20 3E-24 150.9 11.6 151 29-190 14-175 (475)
41 2xkr_A CYP142, putative cytoch 99.8 2.5E-18 8.4E-23 139.2 19.5 177 57-249 18-197 (398)
42 3ejb_B Biotin biosynthesis cyt 99.8 2E-18 6.9E-23 140.0 18.6 178 57-249 13-202 (404)
43 3r9b_A Cytochrome P450 164A2; 99.8 2.2E-18 7.7E-23 140.3 18.9 191 46-249 18-223 (418)
44 3oo3_A OXY protein; cytochrome 99.8 2.6E-18 8.8E-23 138.4 18.6 175 57-249 12-195 (384)
45 4fb2_A P450CIN; heme, monooxyg 99.8 4E-18 1.4E-22 137.9 19.2 174 57-249 19-199 (398)
46 2z3t_A Cytochrome P450; monoxy 99.8 2.4E-18 8.1E-23 140.3 17.9 180 57-248 20-220 (425)
47 1q5d_A P450 epoxidase; cytochr 99.8 5.2E-18 1.8E-22 138.1 19.3 179 57-249 26-220 (419)
48 3lxh_A Cytochrome P450; heme, 99.8 1.6E-18 5.6E-23 141.2 16.0 180 57-249 38-223 (421)
49 2dkk_A Cytochrome P450; CYP158 99.8 5.5E-18 1.9E-22 137.5 18.2 174 57-249 27-213 (411)
50 3nc3_A Cytochrome P450 CYPX; c 99.8 2.7E-18 9.2E-23 140.6 16.2 180 57-249 53-236 (441)
51 3mgx_A Putative P450 monooxyge 99.8 7.9E-18 2.7E-22 136.8 17.8 178 57-249 37-225 (415)
52 1z8o_A 6-deoxyerythronolide B 99.8 5.3E-18 1.8E-22 137.5 16.8 175 57-249 14-207 (404)
53 3a4g_A Vitamin D hydroxylase; 99.8 9.7E-18 3.3E-22 136.1 18.3 172 57-249 20-202 (411)
54 3aba_A Cytochrome P450; oxidor 99.8 6.3E-18 2.2E-22 136.9 16.9 174 57-249 19-204 (403)
55 3tkt_A Cytochrome P450; aromat 99.8 2.6E-18 8.7E-23 141.1 14.8 185 59-250 47-257 (450)
56 2y5n_A MYCG, P-450-like protei 99.8 7.9E-18 2.7E-22 136.9 17.4 175 57-249 37-221 (417)
57 2wm5_A CYP124, putative cytoch 99.8 1.3E-17 4.3E-22 136.4 17.9 179 58-249 45-241 (435)
58 3abb_A CYP105D6, cytochrome P4 99.8 1.6E-17 5.4E-22 134.8 16.9 131 57-192 24-168 (408)
59 2uuq_A CYP130, cytochrome P450 99.8 5.3E-18 1.8E-22 137.8 13.9 176 57-249 25-215 (414)
60 2z36_A MOXA, cytochrome P450 t 99.8 2.4E-17 8.2E-22 133.9 17.8 131 57-192 22-170 (413)
61 3tyw_A Putative cytochrome P45 99.8 2.1E-17 7E-22 134.5 17.3 174 57-249 29-216 (417)
62 2xbk_A PIMD protein; epoxidati 99.8 3.2E-17 1.1E-21 132.7 17.9 173 57-249 26-213 (404)
63 1odo_A Putative cytochrome P45 99.8 1.4E-17 4.7E-22 135.2 15.6 174 57-249 15-206 (408)
64 1gwi_A CYP154C1, cytochrome P4 99.8 3.5E-17 1.2E-21 132.9 17.7 174 57-249 17-209 (411)
65 3rwl_A Cytochrome P450 alkane 99.8 2E-16 7E-21 128.9 22.0 132 57-192 38-184 (426)
66 3buj_A CALO2; heme, iron, meta 99.8 2.8E-17 9.5E-22 132.9 15.4 177 57-249 13-201 (397)
67 1lfk_A OXYB, P450 monooxygenas 99.7 2E-16 6.9E-21 127.9 15.4 173 59-249 15-205 (398)
68 3b4x_A 367AA long hypothetical 99.7 2.2E-16 7.5E-21 126.3 14.8 168 59-249 1-182 (367)
69 3oft_A Cytochrome P450, CYP101 99.7 3.9E-16 1.3E-20 126.2 15.8 173 57-249 24-201 (396)
70 2wiy_A XPLA-heme, cytochrome P 99.7 9.6E-16 3.3E-20 123.7 17.2 178 57-250 20-202 (394)
71 3p3o_A Cytochrome P450; monoox 99.7 1.5E-16 5.2E-21 129.3 12.2 177 57-249 33-221 (416)
72 4dnj_A Putative cytochrome P45 99.6 2.9E-14 1E-18 115.7 18.9 141 40-191 19-172 (412)
73 1io7_A Cytochrome P450 CYP119; 99.6 8.7E-15 3E-19 117.1 15.4 125 59-192 1-140 (368)
74 4dxy_A Cytochrome P450, CYP101 99.6 2.8E-14 9.6E-19 115.8 17.9 182 57-251 37-224 (417)
75 1n40_A P450 MT2, cytochrome P4 99.6 8.4E-15 2.9E-19 118.3 13.5 136 57-203 16-166 (396)
76 2rfb_A Cytochrome P450; heme, 99.6 9.8E-15 3.4E-19 115.7 13.5 124 68-204 2-128 (343)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.9 2.2E-11 7.6E-16 97.2 -3.3 135 34-193 35-182 (381)
78 2jwa_A Receptor tyrosine-prote 61.1 15 0.00052 18.8 4.0 10 14-23 25-34 (44)
79 3lqv_A PRE-mRNA branch site pr 56.6 20 0.00068 22.3 4.6 57 34-97 3-65 (115)
80 4f25_A Polyadenylate-binding p 54.6 8.7 0.0003 24.2 2.6 54 43-103 9-70 (115)
81 2diu_A KIAA0430 protein; struc 48.1 28 0.00095 21.4 3.9 41 62-103 29-71 (96)
82 1s79_A Lupus LA protein; RRM, 47.5 25 0.00086 21.6 3.8 42 59-100 24-73 (103)
83 3s8s_A Histone-lysine N-methyl 44.0 26 0.00087 21.9 3.5 54 43-103 10-73 (110)
84 1iqt_A AUF1, heterogeneous nuc 43.9 36 0.0012 18.9 3.9 41 60-100 13-62 (75)
85 3d2w_A TAR DNA-binding protein 42.5 17 0.00057 21.6 2.3 46 43-95 15-64 (89)
86 2jvr_A Nucleolar protein 3; RN 42.4 25 0.00085 22.1 3.2 54 43-103 32-92 (111)
87 2k1k_A Ephrin type-A receptor 41.0 31 0.0011 16.9 2.7 7 17-23 29-35 (38)
88 2dnr_A Synaptojanin-1; RRM dom 39.4 63 0.0022 19.6 4.7 42 63-104 32-74 (91)
89 2kxn_B Transformer-2 protein h 38.0 75 0.0026 20.3 5.2 50 42-98 49-107 (129)
90 1whv_A Poly(A)-specific ribonu 36.0 40 0.0014 20.8 3.2 35 63-97 32-67 (100)
91 1sjq_A Polypyrimidine tract-bi 33.7 50 0.0017 20.5 3.5 48 43-97 20-70 (105)
92 2krb_A Eukaryotic translation 32.4 70 0.0024 18.1 4.0 37 61-97 22-65 (81)
93 2mss_A Protein (musashi1); RNA 32.3 41 0.0014 18.7 2.9 42 60-101 13-63 (75)
94 2d9o_A DNAJ (HSP40) homolog, s 30.2 96 0.0033 18.9 5.0 39 60-98 31-73 (100)
95 1nu4_A U1A RNA binding domain; 30.0 87 0.003 18.4 4.7 41 63-103 29-76 (97)
96 3beg_B Splicing factor, argini 29.9 77 0.0026 19.7 4.1 55 43-104 20-77 (115)
97 2dgx_A KIAA0430 protein; RRM d 29.5 91 0.0031 18.4 4.9 35 63-97 30-70 (96)
98 1x4c_A Splicing factor, argini 29.4 75 0.0026 19.4 3.9 54 43-103 19-75 (108)
99 2cq4_A RNA binding motif prote 28.5 92 0.0031 19.1 4.3 45 59-103 38-91 (114)
100 2dnz_A Probable RNA-binding pr 27.6 62 0.0021 19.0 3.2 45 59-103 18-72 (95)
101 1x5p_A Negative elongation fac 26.9 87 0.003 18.5 3.8 40 59-98 26-68 (97)
102 2a3j_A U1 small nuclear ribonu 26.7 1.2E+02 0.0041 19.4 4.6 36 63-98 50-91 (127)
103 2cqc_A Arginine/serine-rich sp 26.5 64 0.0022 18.9 3.2 49 43-98 19-76 (95)
104 2nlw_A Eukaryotic translation 25.5 78 0.0027 19.2 3.4 44 60-103 35-86 (105)
105 3ibp_A Chromosome partition pr 25.5 1E+02 0.0035 23.3 4.4 79 81-160 148-237 (302)
106 2ad9_A Polypyrimidine tract-bi 25.3 70 0.0024 20.4 3.2 48 43-97 35-85 (119)
107 2xnq_A Nuclear polyadenylated 25.3 1.1E+02 0.0038 18.1 4.1 38 60-97 37-75 (97)
108 3ctr_A Poly(A)-specific ribonu 25.1 34 0.0012 21.2 1.6 36 63-98 22-58 (101)
109 2kvi_A Nuclear polyadenylated 24.8 91 0.0031 18.4 3.6 44 60-103 25-70 (96)
110 3s7r_A Heterogeneous nuclear r 24.7 70 0.0024 18.4 3.0 51 43-100 15-74 (87)
111 3v4m_A Splicing factor U2AF 65 23.9 1E+02 0.0035 18.8 3.8 43 62-104 31-85 (105)
112 3ns6_A Eukaryotic translation 23.7 1.2E+02 0.0041 18.1 4.0 37 61-97 27-72 (100)
113 1dw9_A Cyanate lyase; cyanate 23.6 54 0.0019 22.2 2.5 35 33-72 83-118 (156)
114 1x4e_A RNA binding motif, sing 23.4 46 0.0016 19.1 2.0 38 60-97 19-65 (85)
115 2dnp_A RNA-binding protein 14; 23.2 1.2E+02 0.004 17.5 4.6 54 43-103 13-68 (90)
116 2la6_A RNA-binding protein FUS 22.9 1.1E+02 0.0038 18.0 3.8 48 43-97 17-81 (99)
117 2dgs_A DAZ-associated protein 22.7 1.1E+02 0.0038 18.0 3.8 45 59-103 23-76 (99)
118 2dgt_A RNA-binding protein 30; 22.7 1.2E+02 0.0039 17.7 3.8 54 43-103 14-69 (92)
119 2e5h_A Zinc finger CCHC-type a 22.6 1.2E+02 0.0042 17.5 4.4 48 43-97 20-76 (94)
120 1x4h_A RNA-binding protein 28; 22.5 1.4E+02 0.0046 18.1 4.4 49 43-98 19-76 (111)
121 1whx_A Hypothetical protein ri 22.2 1.4E+02 0.0049 18.2 4.3 45 59-103 23-71 (111)
122 2dnq_A RNA-binding protein 4B; 22.2 1.2E+02 0.0042 17.4 3.9 38 60-97 22-60 (90)
123 2dgu_A Heterogeneous nuclear r 22.1 1.3E+02 0.0046 17.9 4.8 54 43-103 15-70 (103)
124 3ex7_B RNA-binding protein 8A; 22.1 1.4E+02 0.0046 18.7 4.2 54 43-103 26-89 (126)
125 2wbr_A GW182, gawky, LD47780P; 21.6 1.4E+02 0.0048 17.9 5.1 49 41-96 9-60 (89)
126 1ufw_A Synaptojanin 2; RNP dom 21.5 1.1E+02 0.0036 18.8 3.2 41 63-103 41-82 (95)
127 2dnm_A SRP46 splicing factor; 21.5 1E+02 0.0036 18.3 3.5 54 43-103 17-80 (103)
128 1oo0_B CG8781-PA, drosophila Y 21.3 1.3E+02 0.0044 18.2 3.9 54 43-103 30-93 (110)
129 2dh8_A DAZ-associated protein 21.3 1.1E+02 0.0037 18.3 3.5 54 43-103 20-82 (105)
130 2do4_A Squamous cell carcinoma 21.2 88 0.003 18.6 3.1 49 43-98 21-77 (100)
131 3mdf_A Peptidyl-prolyl CIS-tra 21.2 1.2E+02 0.0042 17.1 3.9 44 60-103 21-74 (85)
132 2cq3_A RNA-binding protein 9; 21.2 1.2E+02 0.0041 18.1 3.7 54 43-103 19-80 (103)
133 2jwn_A Embryonic polyadenylate 20.6 1E+02 0.0035 19.2 3.4 45 59-103 49-102 (124)
134 2d9p_A Polyadenylate-binding p 20.3 83 0.0028 18.8 2.8 48 43-97 19-73 (103)
135 2dhg_A TRNA selenocysteine ass 20.2 1.4E+02 0.0049 17.7 3.9 49 43-98 13-70 (104)
136 1p27_B RNA-binding protein 8A; 20.2 1.2E+02 0.004 18.2 3.5 48 43-97 27-83 (106)
137 2dgv_A HnRNP M, heterogeneous 20.1 1.1E+02 0.0037 17.7 3.3 49 43-98 12-67 (92)
No 1
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.96 E-value=2.2e-28 Score=200.79 Aligned_cols=209 Identities=24% Similarity=0.510 Sum_probs=159.1
Q ss_pred cccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecC
Q 025228 28 RSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY 107 (256)
Q Consensus 28 ~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~ 107 (256)
+.++.+.||||+++|++||++++.. ++. ++.+++++||||++++++|.+.|+++||+++++|+.++...|+...
T Consensus 7 ~~~~~~~pPgp~~~P~iG~~~~~~~-----~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~ 80 (444)
T 2ve3_A 7 NLNSLPIPPGDFGLPWLGETLNFLN-----DGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATW 80 (444)
T ss_dssp --CCCCCCCCCCCBTTTBTHHHHHH-----CTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEEC
T ss_pred CCCCCCCCCCCCCCCccccHHHHhc-----CcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccch
Confidence 4556678999999999999998863 455 7888999999999999888889999999999999977655676443
Q ss_pred ccccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHH
Q 025228 108 PGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQL 185 (256)
Q Consensus 108 ~~~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~ 185 (256)
.......+|..++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+.++ ++|+.+. ..+++|+++.++
T Consensus 81 ~~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~ 159 (444)
T 2ve3_A 81 PLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDS-YLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLF 159 (444)
T ss_dssp CHHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHT-THHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHH-HHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHH
Confidence 333334556558888999999999999999999999998 9999999999999988654 8999999 999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcc
Q 025228 186 MSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKE 248 (256)
Q Consensus 186 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 248 (256)
|| +......++.+.+..+......++.++|...+.+..++.+.+. +++.+.|++++++
T Consensus 160 fG-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~i~~r~~~ 217 (444)
T 2ve3_A 160 MG-EKVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLL----AELEKIIKARQQQ 217 (444)
T ss_dssp TC-HHHHSCTTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHH----HHHHHHHHHHHTS
T ss_pred cC-CCcccHHHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHH----HHHHHHHHHHhcC
Confidence 99 2221113444445555444444566667655555444444444 4477888877754
No 2
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.95 E-value=1.5e-27 Score=196.89 Aligned_cols=208 Identities=15% Similarity=0.254 Sum_probs=160.8
Q ss_pred CCCCCCCC-CCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc--c
Q 025228 33 RLPPGSLG-LPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP--G 109 (256)
Q Consensus 33 ~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~ 109 (256)
+.||+|++ +|++||++++. ++++.++.+++++|||||++++++.+.|+++||+++++++.+++..++.+.. .
T Consensus 11 ~~PP~~~~~lP~iG~~~~~~-----~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~ 85 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAFG-----KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR 85 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHhh-----hCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhh
Confidence 45677764 99999999987 5789999999999999999999999999999999999999888777765543 2
Q ss_pred ccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHHcC
Q 025228 110 SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMS 187 (256)
Q Consensus 110 ~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~fG 187 (256)
.....+|...++..+|+.|+++|++++++|+..++++ +.+.+.+.++++++.+... .+|+.+. ..+++++++.++||
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG 164 (461)
T 3ld6_A 86 LTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQ-HVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHG 164 (461)
T ss_dssp HHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHH-HHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred hhhccCCCccccCCCcHHHHHHHHhccccccHHHHhh-hhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcC
Confidence 2335566544456789999999999999999999998 9999999999999998766 8999999 99999999999999
Q ss_pred CCChHH-HHHHHHHHHHHHHh----hcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcccc
Q 025228 188 FDPNEW-TESLRKEYVLVIEG----FFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEKN 250 (256)
Q Consensus 188 ~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 250 (256)
.+.++. .+.+.+.+..+... ...+|.|+|...+.+..++.+++.+. +.+.|++++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~i~~r~~~~~ 228 (461)
T 3ld6_A 165 KEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDI----FYKAIQKRRQSQE 228 (461)
T ss_dssp HHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHH----HHHHHHHHTTCCC
T ss_pred cchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHH----HHHHHHHHHhcCC
Confidence 865431 22222333322222 23366777777666655555554444 7888888876543
No 3
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.94 E-value=2.4e-26 Score=189.61 Aligned_cols=211 Identities=14% Similarity=0.239 Sum_probs=158.2
Q ss_pred cccCCCCCCC-CCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeec
Q 025228 28 RSRRLRLPPG-SLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECS 106 (256)
Q Consensus 28 ~~~~~~~ppg-p~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~ 106 (256)
..++.+.||| |+++|++||++++. .+++.++.+++++||||+++++++.+.|++++|+.+++++.++...++.+
T Consensus 6 ~~~~~~~PPg~P~~lP~iG~l~~~~-----~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~ 80 (461)
T 3i3k_A 6 LPAGVKSPPYIFSPIPFLGHAIAFG-----KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAE 80 (461)
T ss_dssp ----CCCCCBCCCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESH
T ss_pred CCCCCCCCCCCCCCCCccccHHhhc-----cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccc
Confidence 3345578998 88999999999986 46889999999999999999999999999999999999998877666543
Q ss_pred Cc--cccccccCcccccc-cCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHH
Q 025228 107 YP--GSISNLLGKHSLLL-MKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELT 181 (256)
Q Consensus 107 ~~--~~~~~~~g~~~l~~-~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii 181 (256)
.. ......+| .|++. .+|+.|+++|++++++|+..++++ +.+.+.+.++++++.+.+. .+|+.+. ..++++++
T Consensus 81 ~~~~~~~~~~~g-~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~-~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~ 158 (461)
T 3i3k_A 81 DVYSRLTTPVFG-KGVAYDVPNPVFLEQKKMLKSGLNIAHFKQ-HVSIIEKETKEYFESWGESGEKNVFEALSELIILTA 158 (461)
T ss_dssp HHHHHHHHHHHC-TTSGGGSCHHHHHHHHHHHHHHSSHHHHHH-HHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHH
T ss_pred hHHHHhhhhhcC-CeeeeCCCcHHHHHHHHHHhhhhCHHHHHH-HHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHH
Confidence 22 12234455 46655 469999999999999999999998 9999999999999998766 7899999 99999999
Q ss_pred HHHHcCCCChHH-HHHHHHHHHHHHHh----hcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 182 VKQLMSFDPNEW-TESLRKEYVLVIEG----FFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 182 ~~~~fG~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+.++||.+.... .+.+.+.+..+... ...+|.|+|...+++..++.+. +.+++.+.|+++++++
T Consensus 159 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~ 227 (461)
T 3i3k_A 159 SHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHRE----IKDIFYKAIQKRRQSQ 227 (461)
T ss_dssp HHHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHH----HHHHHHHHHHHHTTCC
T ss_pred HHHHccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHH----HHHHHHHHHHHHHhcc
Confidence 999999755431 12232333333222 1235677776655554444444 4444888888877654
No 4
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.94 E-value=4.1e-26 Score=190.17 Aligned_cols=158 Identities=9% Similarity=0.124 Sum_probs=125.7
Q ss_pred CCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccc
Q 025228 31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS 110 (256)
Q Consensus 31 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~ 110 (256)
+.+.||||+++|++||++++..... ...+..+.+++++||||+++++++.+.|+++||+++++++.+ ..|++++...
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~ 119 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLW-MGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSK 119 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHH-HCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCH
T ss_pred ccCCCCCCCCCceeeehhccccccc-cchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhh
Confidence 4568999999999999998854211 245668889999999999999999999999999999999954 3455444322
Q ss_pred c-ccc--cCccccc-ccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc----cc-eeehhhh-hhHHHHH
Q 025228 111 I-SNL--LGKHSLL-LMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT----DR-VLLMEEA-KKITFEL 180 (256)
Q Consensus 111 ~-~~~--~g~~~l~-~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~d~~~~-~~~~~~i 180 (256)
. ... .++.|++ ..+|+.|+++|++++++|+..++++ +.+.+.+.++++++.+. ++ .+|+.+. ..+++|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~v 198 (503)
T 3s79_A 120 LGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVR-MVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDT 198 (503)
T ss_dssp HHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHH-HHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHH
T ss_pred hhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHH
Confidence 1 121 2234554 5679999999999999999999998 88999999998888763 22 8999999 9999999
Q ss_pred HHHHHcCCCChH
Q 025228 181 TVKQLMSFDPNE 192 (256)
Q Consensus 181 i~~~~fG~~~~~ 192 (256)
++.++||.+.++
T Consensus 199 i~~~~fG~~~~~ 210 (503)
T 3s79_A 199 SNTLFLRIPLDE 210 (503)
T ss_dssp HHHHHTCCCCCH
T ss_pred HHHHHcCcccCc
Confidence 999999998753
No 5
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.94 E-value=4.2e-27 Score=195.29 Aligned_cols=155 Identities=15% Similarity=0.222 Sum_probs=131.1
Q ss_pred CCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhC-CceeeecCcc
Q 025228 31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNE-GKLFECSYPG 109 (256)
Q Consensus 31 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~-~~~~~~~~~~ 109 (256)
+.+.||||+++|++||++++. .+++.++.+++++||||+++++++.+.|+++||+++++|+.++ ...|.++...
T Consensus 12 k~~~~PGP~~~PliGn~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~ 86 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSYH-----KGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPF 86 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGGG-----GCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCC
T ss_pred hhCCCCCCCCcCeecCcHHhh-----cChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccc
Confidence 334589999999999998875 5688899999999999999999999999999999999999876 4556555443
Q ss_pred ccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc-----cceeehhhh-hhHHHHHHHH
Q 025228 110 SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT-----DRVLLMEEA-KKITFELTVK 183 (256)
Q Consensus 110 ~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~d~~~~-~~~~~~ii~~ 183 (256)
......| .++++.+|+.|+++|++++++|+.++++. +.+.+.+.++++++.+. ++++|+.+. ..+++|+|+.
T Consensus 87 ~~~~~~~-~~l~~~~g~~w~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~ 164 (485)
T 3nxu_A 87 GPVGFMK-SAISIAEDEEWKRLRSLLSPTFTSGKLKE-MVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITS 164 (485)
T ss_dssp SCCGGGG-GSTTTCCHHHHHHHHHHHGGGGCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHH
T ss_pred ccccccc-cCccccCCcHHHHHHhhcChhcCHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHH
Confidence 3333343 58899999999999999999999999998 89999888888887763 338999999 9999999999
Q ss_pred HHcCCCChH
Q 025228 184 QLMSFDPNE 192 (256)
Q Consensus 184 ~~fG~~~~~ 192 (256)
++||.+.+.
T Consensus 165 ~~fG~~~~~ 173 (485)
T 3nxu_A 165 TSFGVNIDS 173 (485)
T ss_dssp HHHSCCCCG
T ss_pred HHcCCcccc
Confidence 999997653
No 6
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.94 E-value=3e-26 Score=189.94 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=138.2
Q ss_pred hccccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeee
Q 025228 26 RSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFEC 105 (256)
Q Consensus 26 ~~~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~ 105 (256)
+...++...+|||+++|++||++++......++++..+.+++++||||+++++|+.+.|+++||+++++|+.++ ..|.+
T Consensus 17 ~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~ 95 (482)
T 3k9v_A 17 DGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQ 95 (482)
T ss_dssp --CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCC
T ss_pred ccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCC
Confidence 45667788899999999999999986532224678899999999999999999999999999999999999774 45654
Q ss_pred cCcc----cccccc-CcccccccCchhHHHHHHHHHhhc-ChhhHHhhhHHHHHHHHHHHHHhhc------cceeehhhh
Q 025228 106 SYPG----SISNLL-GKHSLLLMKGSLHKRMHSLTMSFA-NSSIIRDHLLVDIDRLVRLHMDSWT------DRVLLMEEA 173 (256)
Q Consensus 106 ~~~~----~~~~~~-g~~~l~~~~g~~w~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~d~~~~ 173 (256)
+... ...... ++.|+++.+|+.|+++||+++++| +.+.+.. +.+.+.+.++++++.+. ++++|+.+.
T Consensus 96 r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~ 174 (482)
T 3k9v_A 96 RLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMK-LDKKINEVLADFLERMDELCDERGRIPDLYSE 174 (482)
T ss_dssp CCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGG-GHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHH
T ss_pred CCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHH
Confidence 4321 111222 246899999999999999999997 6777887 88888888888877653 237999999
Q ss_pred -hhHHHHHHHHHHcCCCCh-------HHHHHHHHHHHHHHH
Q 025228 174 -KKITFELTVKQLMSFDPN-------EWTESLRKEYVLVIE 206 (256)
Q Consensus 174 -~~~~~~ii~~~~fG~~~~-------~~~~~~~~~~~~~~~ 206 (256)
..+++|+|+.++||.+.+ ++...+.+.+..++.
T Consensus 175 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (482)
T 3k9v_A 175 LNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMS 215 (482)
T ss_dssp HHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHH
Confidence 999999999999998762 123445555555444
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.94 E-value=4.8e-26 Score=188.51 Aligned_cols=159 Identities=15% Similarity=0.176 Sum_probs=124.8
Q ss_pred ccccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeec
Q 025228 27 SRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECS 106 (256)
Q Consensus 27 ~~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~ 106 (256)
+.+++.++||||+++|++||++++.. .+++.++.+++++||||+++++++.+.|+++||+++++|+.++...|+++
T Consensus 4 ~~~~~~~lpPgP~~~PliG~~~~~~~----~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r 79 (476)
T 3e6i_A 4 KTSSKGKLPPGPFPLPIIGNLFQLEL----KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGR 79 (476)
T ss_dssp ------CCCCCCCCBTTTBTGGGCCT----TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEE
T ss_pred cccCCCCCCcCCCCcccccChhhhcc----ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCC
Confidence 34556678999999999999988732 57889999999999999999999999999999999999998877777666
Q ss_pred Ccc-ccccccCcccccccCchhHHHHHHHHHhhcChhhH--HhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHH
Q 025228 107 YPG-SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSII--RDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFE 179 (256)
Q Consensus 107 ~~~-~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~ 179 (256)
... ......++ |+++.+|+.|+++|++..+.|+...+ .. +.+.+.+.++++++.+. ++++|+.+. ..+++|
T Consensus 80 ~~~~~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~d 157 (476)
T 3e6i_A 80 GDLPAFHAHRDR-GIIFNNGPTWKDIRRFSLTTLRNYGMGKQG-NESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCN 157 (476)
T ss_dssp CCCGGGGGGTTS-SSTTCCSTTHHHHHHHHHHHHHHTC-CCSH-HHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHH
T ss_pred CCCchhheecCC-CEEecCCcHHHHHHHHHHHHHHhcCCCchH-HHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHH
Confidence 543 33444554 89999999999999999988876543 22 45566666666666653 338999999 999999
Q ss_pred HHHHHHcCCCCh
Q 025228 180 LTVKQLMSFDPN 191 (256)
Q Consensus 180 ii~~~~fG~~~~ 191 (256)
+|+.++||.+.+
T Consensus 158 vi~~~~fG~~~~ 169 (476)
T 3e6i_A 158 VIADILFRKHFD 169 (476)
T ss_dssp HHHHHHHSCCCC
T ss_pred HHHHHHcCCCCC
Confidence 999999998764
No 8
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.94 E-value=1.4e-25 Score=184.38 Aligned_cols=205 Identities=14% Similarity=0.212 Sum_probs=152.3
Q ss_pred CCCCCCCCC-CCccchHHHHHHhhhcCCchHHHHHHHHHcC-CceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc
Q 025228 32 LRLPPGSLG-LPFLGETLQLIAAYKTENPEPFIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG 109 (256)
Q Consensus 32 ~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~ 109 (256)
.+.||||++ +|++||++++. .+++.++.+++++|| ++|++++++.+.|+++||+++++++.++...++++...
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~ 76 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFG-----KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVY 76 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHH-----HCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGG
T ss_pred CCCCCCCCCCcchhccHHHHc-----cCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhH
Confidence 467888665 99999999986 468889999999999 99999999999999999999999998877778765433
Q ss_pred -ccccccCcccccc-cCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHH-hhc-cc-eeehhhh-hhHHHHHHHH
Q 025228 110 -SISNLLGKHSLLL-MKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMD-SWT-DR-VLLMEEA-KKITFELTVK 183 (256)
Q Consensus 110 -~~~~~~g~~~l~~-~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-~~~-~~-~~d~~~~-~~~~~~ii~~ 183 (256)
.....+|. |+++ .+|+.|+++|++++++|+..++.. +.+.+.+.++++++ .+. ++ .+|+.+. ..+++++++.
T Consensus 77 ~~~~~~~g~-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~ 154 (450)
T 3gw9_A 77 SFMVPVFGE-GVAYAAPYPRMREQLNFLAEELTIAKFQN-FVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQ 154 (450)
T ss_dssp GGGHHHHCT-TSGGGSCHHHHHHHHHHHHHTTSGGGCTT-HHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CcccCCCcHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHH
Confidence 23345564 5544 579999999999999999999998 99999999999998 665 33 8999999 9999999999
Q ss_pred HHcCCCChH--HHHHHHHHHHHHHHhhcc----cc--cCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhc
Q 025228 184 QLMSFDPNE--WTESLRKEYVLVIEGFFT----VP--LPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRK 247 (256)
Q Consensus 184 ~~fG~~~~~--~~~~~~~~~~~~~~~~~~----~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~ 247 (256)
++||.+.+. +..++.+.+..+...... +| .++|.....+..++...+ .+++.+.|+++++
T Consensus 155 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~----~~~~~~~i~~r~~ 222 (450)
T 3gw9_A 155 CLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTEL----QKILSEIIIARKE 222 (450)
T ss_dssp HHSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHcCcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 999986643 134444444444333222 22 133433333333344444 4446666766653
No 9
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.94 E-value=1.2e-26 Score=193.18 Aligned_cols=206 Identities=13% Similarity=0.069 Sum_probs=142.5
Q ss_pred cccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecC
Q 025228 28 RSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY 107 (256)
Q Consensus 28 ~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~ 107 (256)
..++.++||||++ ++++. ..+++..+.+++++||||+++++++.+.|+++||+++++|+.+++..|++++
T Consensus 24 ~~~~~~lPPGP~~------l~~~~----~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~ 93 (496)
T 3qz1_A 24 KLRNLHLPPLVPG------FLHLL----QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93 (496)
T ss_dssp -----CCCCBCSC------SCTTS----SSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCC
T ss_pred hccCCCCCcCCcc------ccccC----CCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence 4455678999986 22221 1678889999999999999999999999999999999999988777776655
Q ss_pred ccc-ccccc-CcccccccC-chhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHHH
Q 025228 108 PGS-ISNLL-GKHSLLLMK-GSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFEL 180 (256)
Q Consensus 108 ~~~-~~~~~-g~~~l~~~~-g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~i 180 (256)
... ..... |..|+++.+ |+.|+++|++++++|+...+.. +.+.+.+.++++++.+. ++++|+.+. ..+++|+
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dv 172 (496)
T 3qz1_A 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSS-MEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSI 172 (496)
T ss_dssp CCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCC-HHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHH
T ss_pred CcchHHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhh-HHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHH
Confidence 432 22232 334899999 9999999999999999766665 88888888888888774 238999999 9999999
Q ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHhh--------cccc--cCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcc
Q 025228 181 TVKQLMSFDPNEWTESLRKEYVLVIEGF--------FTVP--LPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKE 248 (256)
Q Consensus 181 i~~~~fG~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 248 (256)
|+.++||...+.....+.+.+...+... ..+| .++|.....+..++.+. +.+++.+.+++++++
T Consensus 173 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~----~~~~~~~~i~~~~~~ 246 (496)
T 3qz1_A 173 ICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIEN----RDHMVEKQLRRHKES 246 (496)
T ss_dssp TTTTSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHH----HHHHHHHHHHHHHhh
Confidence 9999999844334444545444332211 1122 34454333333334444 444477777776654
No 10
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.93 E-value=1.2e-25 Score=186.20 Aligned_cols=157 Identities=17% Similarity=0.212 Sum_probs=127.4
Q ss_pred cCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc
Q 025228 30 RRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG 109 (256)
Q Consensus 30 ~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~ 109 (256)
++.+.||||+++|++||++++.. .+++.++.+++++||||+++++++.+.|+++||+++++|+.++...|+++...
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~ 82 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNT----EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQ 82 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCT----TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCC
T ss_pred ccCCCCCCCCCCcccccHhhcCC----cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCc
Confidence 34467999999999999987622 56889999999999999999998889999999999999997666667654432
Q ss_pred c-cccccCcccccccCchhHHHHHHHHHhhcChhhH--HhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHHHHH
Q 025228 110 S-ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSII--RDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFELTV 182 (256)
Q Consensus 110 ~-~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~ii~ 182 (256)
. .....++.|+++.+|+.|+++|+++.++|+..++ +. +.+.+.+.++++++.+. ++++|+.+. ..+++|+|+
T Consensus 83 ~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~ 161 (476)
T 2fdv_A 83 ATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRG-IEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVIS 161 (476)
T ss_dssp HHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHH-HHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhh-HHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHH
Confidence 1 2222334688889999999999999999988766 55 78888888888887764 238999999 999999999
Q ss_pred HHHcCCCCh
Q 025228 183 KQLMSFDPN 191 (256)
Q Consensus 183 ~~~fG~~~~ 191 (256)
.++||.+.+
T Consensus 162 ~~~fG~~~~ 170 (476)
T 2fdv_A 162 SIVFGDRFD 170 (476)
T ss_dssp HHHHSSCCC
T ss_pred HHHcCCcCC
Confidence 999999654
No 11
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.93 E-value=8.5e-26 Score=186.64 Aligned_cols=205 Identities=16% Similarity=0.226 Sum_probs=132.1
Q ss_pred CCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCcee-eecCc-c
Q 025228 32 LRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLF-ECSYP-G 109 (256)
Q Consensus 32 ~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~-~~~~~-~ 109 (256)
...||||+++|++||++++. .+++.++.++++ ||||+++++++.++++++||+.+++|+.++ .| .+... .
T Consensus 22 ~eppPgP~~~P~iG~~~~~~-----~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~ 93 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLA-----RDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWE 93 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHH-----HCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC--------
T ss_pred CCCCCCCCCCCcccchHHhc-----cCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHH
Confidence 44688999999999999987 478899999987 999999999999999999999999999775 44 32221 2
Q ss_pred ccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHHcC
Q 025228 110 SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMS 187 (256)
Q Consensus 110 ~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~fG 187 (256)
.....+|..++++.+|+.|+++|++++++|+.+++++ +.+.+.+.++++++.+.++ ++|+.+. ..+++++++.++||
T Consensus 94 ~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g 172 (467)
T 3dbg_A 94 SLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPA-YGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLR 172 (467)
T ss_dssp ----------------------CGGGHHHHSTTTSTT-THHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhC
Confidence 2334556468999999999999999999999999998 9999999999999998755 9999999 99999999999999
Q ss_pred CCChH-HHHHHHHHHHHHHHhhc---ccc----cCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 188 FDPNE-WTESLRKEYVLVIEGFF---TVP----LPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 188 ~~~~~-~~~~~~~~~~~~~~~~~---~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+.++ ....+...+..+..... ..| .++|.....+..++...+.+ ++.+.|+++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~r~~~~ 238 (467)
T 3dbg_A 173 GQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHL----LVDEIIAERRASG 238 (467)
T ss_dssp SSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHH----HHHHHHHHHTTCC
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHH----HHHHHHHHHHhcC
Confidence 98764 34444455444433221 112 22333223333344444444 4788888877654
No 12
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.93 E-value=1.1e-25 Score=187.29 Aligned_cols=158 Identities=13% Similarity=0.101 Sum_probs=122.2
Q ss_pred cCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc
Q 025228 30 RRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG 109 (256)
Q Consensus 30 ~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~ 109 (256)
+..++||||+++|++||++++.. ...++..+.+|+++||||+++++|+.+.|+++||+++++++.+++..|++++..
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~---~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~ 81 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPR---HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQM 81 (494)
T ss_dssp -------CCBCCCEEEEESSCTT---SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCC
T ss_pred CCCCCCCCCCCCCeEcchHHhCC---CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence 45678999999999999987642 135788899999999999999999999999999999999999888888776654
Q ss_pred ccccccC--cccccccC-chhHHHHHHHHHhhcCh--hhHHhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHHH
Q 025228 110 SISNLLG--KHSLLLMK-GSLHKRMHSLTMSFANS--SIIRDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFEL 180 (256)
Q Consensus 110 ~~~~~~g--~~~l~~~~-g~~w~~~R~~~~~~f~~--~~l~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~i 180 (256)
.....++ +.|+++.+ |+.|+++|++++++|+. ..+.. +.+.+.+.++.+++.+. ++++|+... ..+++|+
T Consensus 82 ~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dv 160 (494)
T 3swz_A 82 ATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQK-LEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNV 160 (494)
T ss_dssp HHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTC-HHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHH
T ss_pred HHHHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH
Confidence 3333332 35777665 99999999999999974 34555 66777777776666553 338999999 9999999
Q ss_pred HHHHHcCCCCh
Q 025228 181 TVKQLMSFDPN 191 (256)
Q Consensus 181 i~~~~fG~~~~ 191 (256)
|+.++||.+.+
T Consensus 161 i~~~~fG~~~~ 171 (494)
T 3swz_A 161 ISLICFNTSYK 171 (494)
T ss_dssp HHHHHHSCCCC
T ss_pred HHHHHcCCcCC
Confidence 99999998764
No 13
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.93 E-value=3.9e-25 Score=183.12 Aligned_cols=156 Identities=16% Similarity=0.210 Sum_probs=126.5
Q ss_pred CCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccc
Q 025228 31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS 110 (256)
Q Consensus 31 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~ 110 (256)
+.+.||||+++|++||++++. ..+++.++.+++++||||+++++++.+.|+++||+++++|+.++...|+++....
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~----~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~ 83 (476)
T 1po5_A 8 KGKLPPGPSPLPVLGNLLQMD----RKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA 83 (476)
T ss_dssp -CCCCCCSCCBTTTBTGGGCC----TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG
T ss_pred CCCCCcCCCCCCccccHHhcc----CCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence 346899999999999998762 1678899999999999999999988889999999999999976666676544322
Q ss_pred -cccccCcccccccCchhHHHHHHHHHhhcChh--hHHhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHHHHHH
Q 025228 111 -ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSS--IIRDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFELTVK 183 (256)
Q Consensus 111 -~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~ii~~ 183 (256)
.....++.|+++++|+.|+++|+++.++|+.. +++. +.+.+.+.++++++.+. ++++|+.+. ..+++|+|+.
T Consensus 84 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~ 162 (476)
T 1po5_A 84 VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRS-VEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICS 162 (476)
T ss_dssp GGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHH-HHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence 22233446888899999999999999999887 4555 77788888888777764 248999999 9999999999
Q ss_pred HHcCCCCh
Q 025228 184 QLMSFDPN 191 (256)
Q Consensus 184 ~~fG~~~~ 191 (256)
++||.+.+
T Consensus 163 ~~fG~~~~ 170 (476)
T 1po5_A 163 IVFGKRFD 170 (476)
T ss_dssp HHHSSCCC
T ss_pred HHcCCCCC
Confidence 99998654
No 14
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.93 E-value=1.4e-24 Score=179.89 Aligned_cols=210 Identities=15% Similarity=0.168 Sum_probs=146.4
Q ss_pred cCCCCCCCCCCCCccchHHHHHHhhhcCC--chHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecC
Q 025228 30 RRLRLPPGSLGLPFLGETLQLIAAYKTEN--PEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY 107 (256)
Q Consensus 30 ~~~~~ppgp~~~p~~g~~~~~~~~~~~~~--~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~ 107 (256)
++.++||||+++|++|+++.+.. .. ++..+.+++++||||+++++++.+.|+++||+++++|+.+++..|+++.
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~----~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~ 84 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAA----SSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHH----CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCC
T ss_pred CCCCCCCCCCCCcccccHhhcCc----ccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCC
Confidence 44568999999999999998764 33 7889999999999999999988889999999999999987666676554
Q ss_pred ccc-cccccCccccc-ccCchhHHHHHHHHHhhcChhhH--HhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHH
Q 025228 108 PGS-ISNLLGKHSLL-LMKGSLHKRMHSLTMSFANSSII--RDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFE 179 (256)
Q Consensus 108 ~~~-~~~~~g~~~l~-~~~g~~w~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~ 179 (256)
... .....++.|++ +.+|+.|+++|++++++|+..++ .. +.+.+.+.++++++.+. ++++|+.+. ..+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~ 163 (481)
T 3czh_A 85 CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKS-FESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163 (481)
T ss_dssp CCHHHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTT-HHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHH
T ss_pred CcHHHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHH-HHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 322 22233334644 57899999999999999987654 44 77888888888877764 237999999 999999
Q ss_pred HHHHHHcCCCCh---HHHHHHHHHHHHHHHhh--------ccccc--CCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhh
Q 025228 180 LTVKQLMSFDPN---EWTESLRKEYVLVIEGF--------FTVPL--PIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKR 246 (256)
Q Consensus 180 ii~~~~fG~~~~---~~~~~~~~~~~~~~~~~--------~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~ 246 (256)
+|+.++||.+.+ ++..++.+.+..++... ..+|+ ++|...+.+..++.. .+.+++.+.|++++
T Consensus 164 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~----~~~~~~~~~i~~r~ 239 (481)
T 3czh_A 164 ITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAA----VVYDFLSRLIEKAS 239 (481)
T ss_dssp HHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 999999998654 23344444444433211 11222 234322333333333 34455777777776
Q ss_pred cc
Q 025228 247 KE 248 (256)
Q Consensus 247 ~~ 248 (256)
++
T Consensus 240 ~~ 241 (481)
T 3czh_A 240 VN 241 (481)
T ss_dssp TT
T ss_pred Hh
Confidence 53
No 15
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.93 E-value=3.8e-25 Score=183.22 Aligned_cols=172 Identities=16% Similarity=0.100 Sum_probs=126.0
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc
Q 025228 29 SRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP 108 (256)
Q Consensus 29 ~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~ 108 (256)
+++.+.||||+++|++||++++.. .+++..+.+++++||||+++++++.+.|+++||+++++|+.++...|+++..
T Consensus 7 ~~~~~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~ 82 (477)
T 1r9o_A 7 SGRGKLPPGPTPLPVIGNILQIGI----KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGI 82 (477)
T ss_dssp --CCBCCCCSSSCC-----CCBCH----HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECC
T ss_pred cCCCCCCCCCCCCceeccHhhcCC----CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCc
Confidence 334468999999999999877621 4578899999999999999999888999999999999999766666765443
Q ss_pred cc-cccccCcccccccCchhHHHHHHHHHhhcChh--hHHhhhHHHHHHHHHHHHHhhc---cceeehhhh-hhHHHHHH
Q 025228 109 GS-ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSS--IIRDHLLVDIDRLVRLHMDSWT---DRVLLMEEA-KKITFELT 181 (256)
Q Consensus 109 ~~-~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~-~~~~~~ii 181 (256)
.. .....++.|+++++|+.|+++|+++.++|+.. .++. +.+.+.+.++++++.+. ++++|+.+. ..+++|+|
T Consensus 83 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi 161 (477)
T 1r9o_A 83 FPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRS-IEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVI 161 (477)
T ss_dssp CSCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSC-HHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHH
T ss_pred chhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHH-HHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHH
Confidence 21 22223346888899999999999999999887 3454 67777777777777764 238999999 99999999
Q ss_pred HHHHcCCCChH---HHHHHHHHHHHHH
Q 025228 182 VKQLMSFDPNE---WTESLRKEYVLVI 205 (256)
Q Consensus 182 ~~~~fG~~~~~---~~~~~~~~~~~~~ 205 (256)
+.++||.+.+. +...+.+.+...+
T Consensus 162 ~~~~fG~~~~~~~~~~~~~~~~~~~~~ 188 (477)
T 1r9o_A 162 CSIIFHKRFDYKDQQFLNLMEKLNENI 188 (477)
T ss_dssp HHHHHSCCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHccCcCCCCCHHHHHHHHHHHHHH
Confidence 99999986532 3344444444443
No 16
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.93 E-value=4.9e-25 Score=181.48 Aligned_cols=205 Identities=13% Similarity=0.160 Sum_probs=133.3
Q ss_pred CCCCC-CCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc-c
Q 025228 33 RLPPG-SLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG-S 110 (256)
Q Consensus 33 ~~ppg-p~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~ 110 (256)
+.||| |.++|++||++++. .+++.++.+++++||||+++++++.++++++||+++++|+.++...|+++... .
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~-----~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~ 78 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFR-----TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPF 78 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHT-----TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGG
T ss_pred CCCCCCCCCCCCccCHHHHh-----hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhH
Confidence 46887 77899999999874 57889999999999999999998888999999999999997765567655432 2
Q ss_pred cccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHHcCC
Q 025228 111 ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMSF 188 (256)
Q Consensus 111 ~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~fG~ 188 (256)
....+| .++ ..+|+.|+++|++++++|++++++. +.+.+.+.++++++.+..+ ++|+.+. ..+++++++.++||.
T Consensus 79 ~~~~~g-~~~-~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 155 (455)
T 2cib_A 79 MTPIFG-EGV-VFDASPERRKEMLHNAALRGEQMKG-HAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGK 155 (455)
T ss_dssp GHHHHC----------------------CCHHHHHH-HHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred HHhhcC-Ccc-ccCcHHHHHHHhhhccccCHHHHHH-HHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCC
Confidence 223444 354 3589999999999999999999998 9999999999999988655 8999999 999999999999998
Q ss_pred CChH-HHHHHHHHHHHHHHhhccc---ccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 189 DPNE-WTESLRKEYVLVIEGFFTV---PLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 189 ~~~~-~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+.++ ...++.+.+..+......+ ..|+|...+.+..++... +.+++.+.|++|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 216 (455)
T 2cib_A 156 KFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNG----LVALVADIMNGRIANP 216 (455)
T ss_dssp HHHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHH----HHHHHHHHHHHHHHCC
T ss_pred CcchhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHH----HHHHHHHHHHHHHhcc
Confidence 6542 1133444444443322111 113443333333333333 4445778888777543
No 17
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.93 E-value=8.9e-25 Score=181.77 Aligned_cols=210 Identities=16% Similarity=0.152 Sum_probs=142.9
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc
Q 025228 29 SRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP 108 (256)
Q Consensus 29 ~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~ 108 (256)
.++.+.+|||+++|++|+++++. .+++..+.+++++||||+++++++.++++++||+++++|+.+++..|+++..
T Consensus 12 ~~~lp~~PgP~~~p~~G~~~~~~-----~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~ 86 (495)
T 2hi4_A 12 PKGLKSPPEPWGWPLLGHVLTLG-----KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPD 86 (495)
T ss_dssp CTTCBCCCCCCCBTTTBTHHHHT-----TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCC
T ss_pred CCCCCCCCCCCCCcceeeHHhcC-----ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCC
Confidence 33444559999999999998874 5688899999999999999999998999999999999999876666765543
Q ss_pred cc-cccccCccccccc--CchhHHHHHHHHHhhcChh---hH---H---hhhHHHHHHHHHHHHHhhc----c-ceeehh
Q 025228 109 GS-ISNLLGKHSLLLM--KGSLHKRMHSLTMSFANSS---II---R---DHLLVDIDRLVRLHMDSWT----D-RVLLME 171 (256)
Q Consensus 109 ~~-~~~~~g~~~l~~~--~g~~w~~~R~~~~~~f~~~---~l---~---~~~~~~~~~~~~~~~~~~~----~-~~~d~~ 171 (256)
.. .....++.|++++ +|+.|+++|++++++|+.. ++ . . +.+.+.+.++++++.+. + +++|+.
T Consensus 87 ~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~~~d~~ 165 (495)
T 2hi4_A 87 LYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCY-LEEHVSKEAKALISRLQELMAGPGHFDPY 165 (495)
T ss_dssp CHHHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBH-HHHHHHHHHHHHHHHHHHHHHTTSCBCHH
T ss_pred cHHHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhh-HHHHHHHHHHHHHHHHHHhccCCCccchH
Confidence 22 2223344678777 6999999999999987542 22 1 3 66667666666666553 2 389999
Q ss_pred hh-hhHHHHHHHHHHcCCCChH---HHHHHHHHHHHHHHhhc------cccc--CCCChhhHHHHhhhHHHHHhHHHHHH
Q 025228 172 EA-KKITFELTVKQLMSFDPNE---WTESLRKEYVLVIEGFF------TVPL--PIFSTTYRRAIQVPNLIYIQTFFFIY 239 (256)
Q Consensus 172 ~~-~~~~~~ii~~~~fG~~~~~---~~~~~~~~~~~~~~~~~------~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~ 239 (256)
+. ..+++|+|+.++||.+.+. +..++.+.+..+..... .+|+ ++|...+.+..++ .+.+.+++.
T Consensus 166 ~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~----~~~~~~~~~ 241 (495)
T 2hi4_A 166 NQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAF----NQRFLWFLQ 241 (495)
T ss_dssp HHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHH----HHHHHHHHH
Confidence 99 9999999999999986532 23333333333332211 1221 2332222222233 334455577
Q ss_pred HHHHhhhcc
Q 025228 240 FFLKKKRKE 248 (256)
Q Consensus 240 ~~i~~r~~~ 248 (256)
+.|++++++
T Consensus 242 ~~i~~r~~~ 250 (495)
T 2hi4_A 242 KTVQEHYQD 250 (495)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 778777654
No 18
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.93 E-value=6.1e-25 Score=182.00 Aligned_cols=163 Identities=20% Similarity=0.218 Sum_probs=120.5
Q ss_pred hccccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeee
Q 025228 26 RSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFEC 105 (256)
Q Consensus 26 ~~~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~ 105 (256)
++.+++.++||||+++|++||++++.. .+++..+.+++++|||||++++|+.++|+|+||+++++||.+++..|+.
T Consensus 3 ~~~ss~~kLPPGP~~lP~iGn~~~~~~----~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~ 78 (479)
T 3tbg_A 3 KKTSSKGKLPPGPLPLPGLGNLLHVDF----QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTAD 78 (479)
T ss_dssp ------CCCCCCSCCBTTTBTGGGCCT----TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCB
T ss_pred CCCCCCCCCCCCCCCcCcccchHhhcC----CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcC
Confidence 344555679999999999999988753 5778889999999999999999999999999999999999888888876
Q ss_pred cCccccccccC----cccc-cccCchhHHHHHHHHHhhcChhhHHhh-hHHHHHHHHHH---HHHhhccceeehhhh-hh
Q 025228 106 SYPGSISNLLG----KHSL-LLMKGSLHKRMHSLTMSFANSSIIRDH-LLVDIDRLVRL---HMDSWTDRVLLMEEA-KK 175 (256)
Q Consensus 106 ~~~~~~~~~~g----~~~l-~~~~g~~w~~~R~~~~~~f~~~~l~~~-~~~~~~~~~~~---~~~~~~~~~~d~~~~-~~ 175 (256)
++.......++ ..++ +..+|+.|+++|+++.+.|+...+... +.+.+...... .++...++.+|+.+. ..
T Consensus 79 r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (479)
T 3tbg_A 79 RPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158 (479)
T ss_dssp CCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHH
T ss_pred CCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHH
Confidence 65543332221 1344 445699999999999999987665431 22333333332 333333448999999 99
Q ss_pred HHHHHHHHHHcCCCChH
Q 025228 176 ITFELTVKQLMSFDPNE 192 (256)
Q Consensus 176 ~~~~ii~~~~fG~~~~~ 192 (256)
+++|+++.++||.+.+.
T Consensus 159 ~~~~~~~~~~fg~~~~~ 175 (479)
T 3tbg_A 159 AVSNVIASLTCGRRFEY 175 (479)
T ss_dssp HHHHHHHHHHHSCCCCT
T ss_pred HHHHHHHHhhcCCcccc
Confidence 99999999999987653
No 19
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.93 E-value=8.6e-25 Score=182.36 Aligned_cols=157 Identities=13% Similarity=0.099 Sum_probs=104.6
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc
Q 025228 29 SRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP 108 (256)
Q Consensus 29 ~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~ 108 (256)
+++.+.||||+++|++||++++. .+++.++.+++++|||||++++++.+.|+++||+++++|+.++...|++++.
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~ 79 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVG-----QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPS 79 (507)
T ss_dssp ----------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCC
T ss_pred cCCCCCCcCCCCCCeeCchhhcC-----ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCc
Confidence 34556899999999999998885 6789999999999999999999999999999999999999877777876554
Q ss_pred cc-cccccCccccccc-CchhHHHHHHHHHhhcChhhH------HhhhHHHHHHHHHHHHHhhc-----cceeehhhh-h
Q 025228 109 GS-ISNLLGKHSLLLM-KGSLHKRMHSLTMSFANSSII------RDHLLVDIDRLVRLHMDSWT-----DRVLLMEEA-K 174 (256)
Q Consensus 109 ~~-~~~~~g~~~l~~~-~g~~w~~~R~~~~~~f~~~~l------~~~~~~~~~~~~~~~~~~~~-----~~~~d~~~~-~ 174 (256)
.. .....++.++++. +|+.|+++|++++++|+.... .. +.+.+.+.++++++.+. ++++|+.+. .
T Consensus 80 ~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~ 158 (507)
T 3pm0_A 80 FASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQV-LEGHVLSEARELVALLVRGSADGAFLDPRPLTV 158 (507)
T ss_dssp CHHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHH-HHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHH
T ss_pred chHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHH-HHHHHHHHHHHHHHHHHhhcccCCCcChHHHHH
Confidence 32 2223344577554 699999999999998764322 22 55666666666665542 238999999 9
Q ss_pred hHHHHHHHHHHcCCCCh
Q 025228 175 KITFELTVKQLMSFDPN 191 (256)
Q Consensus 175 ~~~~~ii~~~~fG~~~~ 191 (256)
.+++|+++.++||.+.+
T Consensus 159 ~~~~dvi~~~~fG~~~~ 175 (507)
T 3pm0_A 159 VAVANVMSAVCFGCRYS 175 (507)
T ss_dssp HHHHHHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHccccCC
Confidence 99999999999999764
No 20
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.93 E-value=8.2e-26 Score=187.86 Aligned_cols=213 Identities=17% Similarity=0.171 Sum_probs=156.5
Q ss_pred ccccCCCCCCCCCC-CCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCc-eee
Q 025228 27 SRSRRLRLPPGSLG-LPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGK-LFE 104 (256)
Q Consensus 27 ~~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~-~~~ 104 (256)
..+++.+.||||++ +|++||++++. .+++.++.+++++||||+++++++.+++++++|+++++++.+... .++
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~-----~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~ 81 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWK 81 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGT-----CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESS
T ss_pred hhccCCCCCCCCCCCcceeccHHHHh-----cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchH
Confidence 34556678999998 69999999885 789999999999999999999999999999999999999965432 233
Q ss_pred ecCccccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhh--------ccceeehhhh-hh
Q 025228 105 CSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSW--------TDRVLLMEEA-KK 175 (256)
Q Consensus 105 ~~~~~~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~d~~~~-~~ 175 (256)
..........+|..++...+|+.|+++|+.+.++|+++++.+ +.+.+.+.++++++.. .....|+.+. ..
T Consensus 82 ~~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~-~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~ 160 (491)
T 3v8d_A 82 KFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNS-LTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYR 160 (491)
T ss_dssp HHHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHH-HHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHH
T ss_pred HHHHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHH-HHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHH
Confidence 223333456677656666789999999999999999999998 9999999999988753 1127899999 99
Q ss_pred HHHHHHHHHHcCCCCh---HHH---HHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 176 ITFELTVKQLMSFDPN---EWT---ESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 176 ~~~~ii~~~~fG~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+++++++.++||.+.+ +.. .+..+.+..+...+..+..++|...+.+..++++++.+. +.+.++++++..
T Consensus 161 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~ 236 (491)
T 3v8d_A 161 VMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAES----LRHENLQKRESI 236 (491)
T ss_dssp HHHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHH----TSHHHHTTCBSC
T ss_pred HHHHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----HHHHHHhccccc
Confidence 9999999999998743 222 222233333333333334446655556666666665555 445555554433
No 21
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.92 E-value=1.8e-23 Score=173.51 Aligned_cols=176 Identities=12% Similarity=0.121 Sum_probs=133.7
Q ss_pred cccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecC
Q 025228 28 RSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY 107 (256)
Q Consensus 28 ~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~ 107 (256)
..+++..+|||+..++. +++++........++..+.+++++||||+++++|+.+.|+++||+++++|+.+++ .|+++.
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence 44566778999877654 7777654322246788899999999999999999989999999999999997654 565554
Q ss_pred ccc-c---ccc-cCcccccccCchhHHHHHHHHHhh-cChhhHHhhhHHHHHHHHHHHHHhhcc--------c-eeehhh
Q 025228 108 PGS-I---SNL-LGKHSLLLMKGSLHKRMHSLTMSF-ANSSIIRDHLLVDIDRLVRLHMDSWTD--------R-VLLMEE 172 (256)
Q Consensus 108 ~~~-~---~~~-~g~~~l~~~~g~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~~~~~~~~--------~-~~d~~~ 172 (256)
... . ... .++.|+++.+|+.|+++|++++++ |+.+++++ +.+.+.+.++++++.+.. + ++|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~ 160 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKN-FLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISD 160 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHH-hhhHHHHHHHHHHHHHHHHhcccccCCCCccHHH
Confidence 321 1 111 134688999999999999999995 99999998 888888888887776532 3 799999
Q ss_pred h-hhHHHHHHHHHHcCCCCh-------HHHHHHHHHHHHHHH
Q 025228 173 A-KKITFELTVKQLMSFDPN-------EWTESLRKEYVLVIE 206 (256)
Q Consensus 173 ~-~~~~~~ii~~~~fG~~~~-------~~~~~~~~~~~~~~~ 206 (256)
. ..+++|+|+.++||.+.+ .....+.+.+..++.
T Consensus 161 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (487)
T 3n9y_A 161 DLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFH 202 (487)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHH
Confidence 9 999999999999998753 133445555544443
No 22
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.91 E-value=1e-23 Score=174.23 Aligned_cols=151 Identities=12% Similarity=0.162 Sum_probs=123.4
Q ss_pred CCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcccc-
Q 025228 33 RLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSI- 111 (256)
Q Consensus 33 ~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~- 111 (256)
..||||+++|++||++++.. .+++..+.+++++||||+++++++.+.|+++||+++++|+.+. .|.+......
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~ 76 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNT----DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALK 76 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCS----SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHH
T ss_pred CCCCCCCCCCccccHHHHhc----ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHH
Confidence 45799999999999987632 4678888999999999999999988999999999999999542 3543222111
Q ss_pred --ccccCccccccc--CchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc---c-eeehhhh-hhHHHHHHH
Q 025228 112 --SNLLGKHSLLLM--KGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD---R-VLLMEEA-KKITFELTV 182 (256)
Q Consensus 112 --~~~~g~~~l~~~--~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~---~-~~d~~~~-~~~~~~ii~ 182 (256)
....| .|+++. +|+.|+++|++++++|++.++++ +.+.+.+.++++++.+.. + ++|+.+. ..+++|+|+
T Consensus 77 ~~~~~~~-~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~ 154 (470)
T 2ij2_A 77 FVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQAMKG-YHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154 (470)
T ss_dssp HHHHHHT-TSGGGSCTTSHHHHHHHHHHGGGGSTTTHHH-HHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHH
T ss_pred HHHHhcC-CceEEcCCCchHHHHHHHHhccccCHHHHHH-HHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHH
Confidence 12223 577776 89999999999999999999998 999999999998887742 2 7999999 999999999
Q ss_pred HHHcCCCCh
Q 025228 183 KQLMSFDPN 191 (256)
Q Consensus 183 ~~~fG~~~~ 191 (256)
.++||.+.+
T Consensus 155 ~~~fG~~~~ 163 (470)
T 2ij2_A 155 LCGFNYRFN 163 (470)
T ss_dssp HHHHSCCCC
T ss_pred HHHcCCccc
Confidence 999998754
No 23
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.91 E-value=7.5e-23 Score=167.41 Aligned_cols=194 Identities=14% Similarity=0.091 Sum_probs=134.9
Q ss_pred CCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCccc
Q 025228 32 LRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYPGS 110 (256)
Q Consensus 32 ~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~ 110 (256)
.+.||||+++|++|++..... .+++.++.++ ++||||+++++ ++.+.|+++||+++++|+.++ .|+++....
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~~----~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~ 97 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDFA----ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNS 97 (436)
T ss_dssp ---------CCBHHHHHHHHH----HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGC
T ss_pred ccCCCCCCccccCCCCCcccc----cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccc
Confidence 356899999999999874332 5789999999 79999999998 778899999999999999765 465543211
Q ss_pred ccc-----ccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc---cceeehhhh--hhHHHHH
Q 025228 111 ISN-----LLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT---DRVLLMEEA--KKITFEL 180 (256)
Q Consensus 111 ~~~-----~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~--~~~~~~i 180 (256)
+.. ...+.++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+. ++++|+.++ ..+++++
T Consensus 98 ~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~v 176 (436)
T 2cd8_A 98 TTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVEL-LRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITV 176 (436)
T ss_dssp SSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHT-THHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHH
T ss_pred ccccccccccccccccccCchHHHHHHHHhHHhhCHHHHHH-HHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence 111 222367888999999999999999999999998 99999999999998886 338999997 5799999
Q ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 181 TVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 181 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
|+. +||.+.++ .+.+.+.+..++. .. .| .+..++.. .+.+++.+.|+++++++
T Consensus 177 i~~-~~G~~~~~-~~~~~~~~~~~~~----~~--~~----~~~~~~~~----~~~~~~~~~i~~r~~~~ 229 (436)
T 2cd8_A 177 ISE-LLGVPEPD-RAAFRVWTDAFVF----PD--DP----AQAQTAMA----EMSGYLSRLIDSKRGQD 229 (436)
T ss_dssp HHH-HHTCCGGG-HHHHHHHHHHHHS----CS--ST----THHHHHHH----HHHHHHHHHHHHHTTSC
T ss_pred HHH-HhCCCHHH-HHHHHHHHHHHhc----cC--CH----HHHHHHHH----HHHHHHHHHHHHHhcCC
Confidence 998 68997653 3344444333332 11 11 22223333 34444777777776543
No 24
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.90 E-value=1.5e-22 Score=164.89 Aligned_cols=190 Identities=15% Similarity=0.223 Sum_probs=141.1
Q ss_pred CCccchHHHHHHhhhcCCchHHHHHHHHHcC-CceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc--c-ccccccC
Q 025228 41 LPFLGETLQLIAAYKTENPEPFIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP--G-SISNLLG 116 (256)
Q Consensus 41 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~-~~~~~~g 116 (256)
.|++||+.++. .+++.++.+++++|| ||+++.++|.+.|++++|+.++.++ + ...|++... . .....+|
T Consensus 8 ~P~lG~~~~~~-----~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~g 80 (417)
T 1izo_A 8 DKSLDNSLTLL-----KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLFG 80 (417)
T ss_dssp CCCTTHHHHHH-----HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTTC
T ss_pred CCccchHHHHh-----hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhcc
Confidence 48999999987 468899999999998 8999998888999999999998654 3 334543321 1 2234566
Q ss_pred cccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHHcCCCChH-H
Q 025228 117 KHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMSFDPNE-W 193 (256)
Q Consensus 117 ~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~fG~~~~~-~ 193 (256)
..++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.|.++ ++|+.+. ..+++++|+.+ ||.+.++ +
T Consensus 81 ~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~ 158 (417)
T 1izo_A 81 VNAIQGMDGSAHIHRKMLFLSLMTPPHQKR-LAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYW-AGVPLKETE 158 (417)
T ss_dssp TTCGGGCCHHHHHHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHH-HTCCCCTTT
T ss_pred ccceeecCChHHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-cCCCCCchH
Confidence 568889999999999999999999999998 9999999999999998755 9999999 99999999998 5987654 3
Q ss_pred HHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcc
Q 025228 194 TESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKE 248 (256)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 248 (256)
..++.+.+..++.... .. ...+.+..++.++ +.+++.++|++++++
T Consensus 159 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~----~~~~~~~~i~~r~~~ 204 (417)
T 1izo_A 159 VKERADDFIDMVDAFG---AV--GPRHWKGRRARPR----AEEWIEVMIEDARAG 204 (417)
T ss_dssp HHHHHHHHHHHHHHTT---CC--SHHHHHHHHHHHH----HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcc---cC--CccchhHHHHHHH----HHHHHHHHHHHHHhh
Confidence 3444444444443321 11 1222233333333 445578888877754
No 25
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.90 E-value=1.8e-23 Score=168.83 Aligned_cols=155 Identities=15% Similarity=0.071 Sum_probs=129.2
Q ss_pred CCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecC-cc-ccccc
Q 025228 37 GSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSY-PG-SISNL 114 (256)
Q Consensus 37 gp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~-~~-~~~~~ 114 (256)
+++.+|++||++++. .+++.++.+++++||||++ ++++.+.|+++||+++++|+.++ .|+++. .. .....
T Consensus 3 ~~~~~p~iGnl~~~~-----~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~ 74 (389)
T 1n97_A 3 RLSLREAWPYLKDLQ-----QDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRL 74 (389)
T ss_dssp ECCHHHHHHHHHHHH-----HCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHH
T ss_pred ccccccccccHHHHh-----hChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHH
Confidence 344578999999885 4688999999999999999 88888999999999999999765 676554 21 22344
Q ss_pred cCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccceeehhhh-hhHHHHHHHHHHcCCCChHH
Q 025228 115 LGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA-KKITFELTVKQLMSFDPNEW 193 (256)
Q Consensus 115 ~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~ii~~~~fG~~~~~~ 193 (256)
.| .++++.+|+.|+++|++++++|+++++++ +.+.+.+.++++++.+.++++|+.+. ..+++|+++.++||.+.++
T Consensus 75 ~g-~~l~~~~g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~- 151 (389)
T 1n97_A 75 TG-RGLLTDWGESWKEARKALKDPFLPKNVRG-YREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSP- 151 (389)
T ss_dssp HC-SSTTTCCHHHHHHHHHHHCGGGSHHHHHT-THHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCH-
T ss_pred hC-CccccCCcHHHHHHHHHhCcccCHHHHHH-HHHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcchH-
Confidence 45 68889999999999999999999999998 99999999999999987458999999 9999999999999998763
Q ss_pred HHHHHHHHHHH
Q 025228 194 TESLRKEYVLV 204 (256)
Q Consensus 194 ~~~~~~~~~~~ 204 (256)
++.+.+..+
T Consensus 152 --~~~~~~~~~ 160 (389)
T 1n97_A 152 --SLAEHALKA 160 (389)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHH
Confidence 444444443
No 26
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.90 E-value=3.9e-22 Score=162.34 Aligned_cols=193 Identities=15% Similarity=0.145 Sum_probs=139.2
Q ss_pred CCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHc-CCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc--c-c
Q 025228 35 PPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRF-GSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP--G-S 110 (256)
Q Consensus 35 ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~-g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~-~ 110 (256)
|||| |++||+.++. .+++.++.+++++| |||+++..++.+.+++++|+.++ ++.+. ..|++... . .
T Consensus 4 pPg~---P~iG~~~~~~-----~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~ 73 (415)
T 3awm_A 4 TPHT---KGPDETLSLL-----ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAI 73 (415)
T ss_dssp --------CCCCHHHHH-----HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHH
T ss_pred CCCC---CccchHHHHH-----hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhh
Confidence 6666 7999999886 46899999999999 79999998888899999999986 66443 45654322 1 1
Q ss_pred cccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHHcCC
Q 025228 111 ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMSF 188 (256)
Q Consensus 111 ~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~fG~ 188 (256)
....+|..++++.||+.|+++|++++++|++++++. +.+.+.+.++++++.|.++ ++|+.+. ..+++++++++ ||.
T Consensus 74 ~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~-~G~ 151 (415)
T 3awm_A 74 QKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRA-LAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAW-AGV 151 (415)
T ss_dssp HTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHH-HTC
T ss_pred hhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHH-cCC
Confidence 234566568889999999999999999999999998 9999999999999998654 8999999 99999999999 799
Q ss_pred CChH-HHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcc
Q 025228 189 DPNE-WTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKE 248 (256)
Q Consensus 189 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 248 (256)
+.++ +..++.+.+..++... .. +...+.+..++..+ +.+++.+.|++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~----~~~~~~~~i~~r~~~ 203 (415)
T 3awm_A 152 PLPDDEAGNRAGELRALFDAA---GS--ASPRHLWSRLARRR----VDAWAKRIIEGIRAG 203 (415)
T ss_dssp CCCGGGHHHHHHHHHHHHHST---TC--SSHHHHHHHHHHHH----HHHHHHHHHHHHHHT
T ss_pred CCCcchHHHHHHHHHHHHHHh---cc--cCchHHHHHHHHHH----HHHHHHHHHHHHHHh
Confidence 7654 3333434444433321 11 11223333334444 444477778777653
No 27
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.85 E-value=1.5e-20 Score=152.51 Aligned_cols=190 Identities=11% Similarity=0.046 Sum_probs=134.1
Q ss_pred CCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEee----e-cC-CCEEEeeChHHHHHHH-hhCCcee
Q 025228 31 RLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTH----I-FG-EPTVFSADPETNRFIL-QNEGKLF 103 (256)
Q Consensus 31 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~----~-~~-~~~v~v~~p~~~~~il-~~~~~~~ 103 (256)
+.++||||+++|+. +. .+++.++.++ ++||||++++ + ++ .+.|+++||+++++|+ .+. . +
T Consensus 8 ~~~lppgp~~~p~~-----~~-----~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~-~ 74 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TN-----CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-H-F 74 (406)
T ss_dssp CCCEEECCTTTTCE-----ET-----TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-S-E
T ss_pred CCCCcccCcccCCC-----CC-----CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-c-c
Confidence 45678999999876 21 5789999999 8999999999 6 78 8999999999999999 543 2 4
Q ss_pred eecCccc-----cc-cccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehhhh-h
Q 025228 104 ECSYPGS-----IS-NLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEA-K 174 (256)
Q Consensus 104 ~~~~~~~-----~~-~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~-~ 174 (256)
+++.... +. ...+..++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+.. +++|+.++ .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~ 153 (406)
T 1ued_A 75 TTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRR-MEPAIQSLIDDRLDLLEAEGPSADLQGLFA 153 (406)
T ss_dssp ECCCCC---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHH-HHHHHHHHHHHHHHHHHHHCTTEEHHHHTH
T ss_pred cccccccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCeeHHHHHH
Confidence 4433211 11 1112347888999999999999999999999998 999999999999988753 38999998 6
Q ss_pred -hHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 175 -KITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 175 -~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+++++|+. +||.+.++ .+.+.+.+..++. . .. ...+..++..+ +.+++.+.|+++++++
T Consensus 154 ~~~~~~vi~~-~~G~~~~~-~~~~~~~~~~~~~----~--~~---~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 214 (406)
T 1ued_A 154 DPVGAHALCE-LLGIPRDD-QREFVRRIRRNAD----L--SR---GLKARAADSAA----FNRYLDNLLARQRADP 214 (406)
T ss_dssp HHHHHHHHHH-HHTCCHHH-HHHHHHHHHHCC---------C---CHHHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHhHHHHHHH-HcCCCHHH-HHHHHHHHHHHHh----c--cC---CHHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 499999994 68987542 2333333333222 1 01 12222333333 4445777787777553
No 28
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.85 E-value=8e-21 Score=157.99 Aligned_cols=162 Identities=17% Similarity=0.288 Sum_probs=126.5
Q ss_pred cccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCC-ceEeeecCCCE-------EEeeChHHHHHHHhhC
Q 025228 28 RSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGS-IFTTHIFGEPT-------VFSADPETNRFILQNE 99 (256)
Q Consensus 28 ~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~-v~~~~~~~~~~-------v~v~~p~~~~~il~~~ 99 (256)
...+.+.||||+++|++|+++++.......+++.++.+++++||+ ||++++++.++ +++++++..+.++.++
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 345667899999999999999987655557899999999999999 99999988887 6667777766666332
Q ss_pred C----ceeeecCccccccccC---cccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-----ce
Q 025228 100 G----KLFECSYPGSISNLLG---KHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-----RV 167 (256)
Q Consensus 100 ~----~~~~~~~~~~~~~~~g---~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~ 167 (256)
. +.+....+... .++| ..+++..+|+.|+++|+++.+.|++.. .. +.+.+.+.++++++.|.. ++
T Consensus 103 ~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~-~~~~i~~~~~~ll~~~~~~~~~~~~ 179 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NR-IFPEFQATYSELFDSLEKELSLKGK 179 (495)
T ss_dssp TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TT-HHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHhccCCC
Confidence 1 22222223233 5565 245566789999999999999998754 65 899999999998888853 38
Q ss_pred eehhhh-hhHHHHHHHHHHcCCCChH
Q 025228 168 LLMEEA-KKITFELTVKQLMSFDPNE 192 (256)
Q Consensus 168 ~d~~~~-~~~~~~ii~~~~fG~~~~~ 192 (256)
+|+.+. ..+++++++.++||.+.++
T Consensus 180 vdl~~~~~~~~~~~i~~~~~G~~~~~ 205 (495)
T 3dsk_A 180 ADFGGSSDGTAFNFLARAFYGTNPAD 205 (495)
T ss_dssp EESHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcch
Confidence 999999 9999999999999987654
No 29
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.85 E-value=3.3e-20 Score=150.45 Aligned_cols=149 Identities=13% Similarity=0.120 Sum_probs=115.1
Q ss_pred CCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec-CCCEEEeeChHHHHHHHhhCCc-eeeecCccc-
Q 025228 34 LPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF-GEPTVFSADPETNRFILQNEGK-LFECSYPGS- 110 (256)
Q Consensus 34 ~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-~~~~v~v~~p~~~~~il~~~~~-~~~~~~~~~- 110 (256)
+||||+++|++|++. .+|+..+.+++ +||||+++.++ |.+.+++++++.+++++.++.. .+..+....
T Consensus 2 ~pPGp~~~P~~g~~~--------~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~ 72 (404)
T 1jfb_A 2 MASGAPSFPFSRASG--------PEPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPE 72 (404)
T ss_dssp ----CCBSSCCCSST--------TSCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCC
T ss_pred CCCCCCCCCCCCCcC--------CCccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcc
Confidence 599999999999975 36888999997 69999998874 6677889999999999976531 111111111
Q ss_pred cc-----cccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-----ceeehhhh-hhHHHH
Q 025228 111 IS-----NLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-----RVLLMEEA-KKITFE 179 (256)
Q Consensus 111 ~~-----~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~~-~~~~~~ 179 (256)
.. ...|..++++.+|+.|+++|++++++|+++++++ +.+.+.+.++++++.+.. +++|+.+. ...+.+
T Consensus 73 ~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~ 151 (404)
T 1jfb_A 73 LSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKN-LQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPS 151 (404)
T ss_dssp CSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHH-HHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHH
T ss_pred ccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHH
Confidence 11 1334457888999999999999999999999998 999999999998888742 37999999 999999
Q ss_pred HHHHHHcCCCChH
Q 025228 180 LTVKQLMSFDPNE 192 (256)
Q Consensus 180 ii~~~~fG~~~~~ 192 (256)
+++..+||.+.++
T Consensus 152 ~i~~~~~G~~~~~ 164 (404)
T 1jfb_A 152 YIIYTLLGVPFND 164 (404)
T ss_dssp HHHHHHHTCCGGG
T ss_pred HHHHHHcCCCHHH
Confidence 9999999997753
No 30
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.85 E-value=2.7e-21 Score=160.62 Aligned_cols=158 Identities=20% Similarity=0.275 Sum_probs=120.8
Q ss_pred ccccCCCCCCCCCC-CCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCc-eee
Q 025228 27 SRSRRLRLPPGSLG-LPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGK-LFE 104 (256)
Q Consensus 27 ~~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~-~~~ 104 (256)
..+...+.||||++ +|++||++++. .+++.++.+++++|||||++++++.++|+++||+++++++.+... .+.
T Consensus 7 ~~~~~~~~pPgp~~~~P~iG~~~~~~-----~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~ 81 (491)
T 3dax_A 7 SRRRQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWK 81 (491)
T ss_dssp CCCCCTTCCCEEEEEESCTTTTGGGT-----CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESS
T ss_pred hhccCCCCCCcCCCcccchhhHHHHh-----hCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChH
Confidence 34445567899887 89999998874 568889999999999999999999999999999999999966442 232
Q ss_pred ecCccccccccCccccc-ccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc------cc--eeehhhh-h
Q 025228 105 CSYPGSISNLLGKHSLL-LMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT------DR--VLLMEEA-K 174 (256)
Q Consensus 105 ~~~~~~~~~~~g~~~l~-~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~------~~--~~d~~~~-~ 174 (256)
+.........+| .+++ ..+|+.|+++|+.+.++|+.+++.. +.+.+.+.+.+.+++.. .. .+|+... .
T Consensus 82 ~~~~~~~~~~~g-~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 159 (491)
T 3dax_A 82 KFHFATSAKAFG-HRSIDPMDGNTTENINDTFIKTLQGHALNS-LTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCY 159 (491)
T ss_dssp HHHHHHHHHHHT-CCCCCGGGTSBCCCHHHHHHHHHSHHHHHH-HHHHHHHHHHHHHC----------CCEEEEHHHHHH
T ss_pred HHHHHHHHHHcC-CCcccccchhHHHHHHHHHHHhcCcccHHH-HHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHH
Confidence 222122233455 3555 6789999999999999999999988 77777777766665431 12 5788888 9
Q ss_pred hHHHHHHHHHHcCCCCh
Q 025228 175 KITFELTVKQLMSFDPN 191 (256)
Q Consensus 175 ~~~~~ii~~~~fG~~~~ 191 (256)
.+++++++.++||.+.+
T Consensus 160 ~~i~~~~~~~~fG~~~~ 176 (491)
T 3dax_A 160 RVMFEAGYLTIFGRDLT 176 (491)
T ss_dssp HHHHHHHHHHHHCBCST
T ss_pred HHHHHHhHHHHcCcccc
Confidence 99999999999998654
No 31
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.84 E-value=2.5e-20 Score=152.26 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCCccchHHHHHHhhhc-CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCc
Q 025228 31 RLRLPPGSLGLPFLGETLQLIAAYKT-ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYP 108 (256)
Q Consensus 31 ~~~~ppgp~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~ 108 (256)
+.++||| ++|++.+.... .. .+++.++.++++ ||||++++. |+.+.|++++++++++++.+ ...|+++..
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~-~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~-~~~fs~r~~ 75 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGY-ADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQ-PGLFSNAEG 75 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGG-GCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHC-TTTEESSSS
T ss_pred ccccchh-----hhcccCChhhh-cccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcC-chhccCccc
Confidence 4567888 78865433111 11 247888998885 799999998 67899999999999999965 456776543
Q ss_pred -cccc-----c-c---cC-----cccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehh
Q 025228 109 -GSIS-----N-L---LG-----KHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLME 171 (256)
Q Consensus 109 -~~~~-----~-~---~g-----~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~ 171 (256)
..+. . + .| ..++++.+|+.|+++|++++++|+++++++ +.+.+.+.++++++.+.. +++|+.
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~d~~ 154 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRK-LEENIRRIAQASVQRLLDFDGECDFM 154 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGG-GHHHHHHHHHHHHHHHHTSSSEEEHH
T ss_pred cccCCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHHHHHHhCCCeehH
Confidence 2211 1 3 43 247888999999999999999999999998 999999999999988753 379998
Q ss_pred hh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhH--HHHhhhHHHHHhHHHHHHHHHHhhhc
Q 025228 172 EA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYR--RAIQVPNLIYIQTFFFIYFFLKKKRK 247 (256)
Q Consensus 172 ~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~i~~r~~ 247 (256)
++ ..+++++|+.+ ||.+.++ .+++.+....++.........+|...+. ...+...+..+.+.+++.+.|+++++
T Consensus 155 ~~~~~~~~~~vi~~~-fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~ 232 (428)
T 1cpt_A 155 TDCALYYPLHVVMTA-LGVPEDD-EPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRS 232 (428)
T ss_dssp HHTTTTHHHHHHHHH-HTCCGGG-HHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhHHHHHHHH-cCCCHhH-HHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55 67999999999 9997753 2333333332221110000111111110 11112233344555668888888876
Q ss_pred cc
Q 025228 248 EK 249 (256)
Q Consensus 248 ~~ 249 (256)
++
T Consensus 233 ~~ 234 (428)
T 1cpt_A 233 CP 234 (428)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 32
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.84 E-value=3.3e-20 Score=150.70 Aligned_cols=200 Identities=10% Similarity=0.050 Sum_probs=130.2
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHh
Q 025228 18 TVIFFIIKRSRSRRLRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQ 97 (256)
Q Consensus 18 l~~~~~~~~~~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~ 97 (256)
..+.+| +.+.++...+|||+. + .+++.++.++++ |||| +.++.+.++++||+++++++.
T Consensus 6 ~~~~iy--r~~~~pl~~~PGp~~----~-----------~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~ 64 (411)
T 2jjn_A 6 ETTCCA--RRTLTTIDEVPGMAD----E-----------TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLR 64 (411)
T ss_dssp -------------CCCSCCCSSC----H-----------HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHH
T ss_pred HhHHhh--hcccCCCCCCCCccc----c-----------cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHc
Confidence 344555 667778888888861 1 246778888985 9998 456678999999999999997
Q ss_pred hCCceeeecCccccccc-cCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccceeehhhh--h
Q 025228 98 NEGKLFECSYPGSISNL-LGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA--K 174 (256)
Q Consensus 98 ~~~~~~~~~~~~~~~~~-~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~ 174 (256)
+. ..|+++....+... .+..++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++. .++++|+..+ .
T Consensus 65 ~~-~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~-~~~~~d~~~~~~~ 141 (411)
T 2jjn_A 65 DT-ATFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISD-LEPRIRDVTRSLLAD-AGESFDLVDVLAF 141 (411)
T ss_dssp CT-TTEESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHT-THHHHHHHHHHHHHT-SCSEEEHHHHTTT
T ss_pred Cc-ccccCcccccCCcccccccccccCCchHHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHhc-CCCceeHHHHHHH
Confidence 64 46766543222221 23357888999999999999999999999998 999999999999988 5458999955 6
Q ss_pred hHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 175 KITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 175 ~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+++++|+.+ ||.+.++. +++.+....+... ..+.+++...+.+..++. +.+.+++.+.|+++++++
T Consensus 142 ~~~~~vi~~~-fG~~~~~~-~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~----~~~~~~~~~~i~~r~~~~ 208 (411)
T 2jjn_A 142 PLPVTIVAEL-LGLPPMDH-EQFGDWSGALVDI--QMDDPTDPALAERIADVL----NPLTAYLKARCAERRADP 208 (411)
T ss_dssp HHHHHHHHHH-HTCCSCCC-STTCCHHHHHHHS--CCSCTTCHHHHHHHHHHH----HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHH-cCCCHHHH-HHHHHHHHHHHhc--cCccccchHHHHHHHHHH----HHHHHHHHHHHHHHHhCC
Confidence 8999999998 99876531 1222222333221 122333211122223333 344455778888777543
No 33
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.83 E-value=1.6e-19 Score=147.66 Aligned_cols=198 Identities=9% Similarity=-0.006 Sum_probs=133.4
Q ss_pred CCCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeee--------cCCCEEEeeChHHHHHHHhhCCcee
Q 025228 32 LRLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHI--------FGEPTVFSADPETNRFILQNEGKLF 103 (256)
Q Consensus 32 ~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~--------~~~~~v~v~~p~~~~~il~~~~~~~ 103 (256)
...||+|.++++++..... ..+|+.++.++ ++||||+++.. |+.+.++|++|+++++|+.+ ...|
T Consensus 17 ~~~p~~~~~~~~~~~~~~~-----~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~f 89 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYA-----ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVF 89 (433)
T ss_dssp ---CCCCTTCCTTCHHHHT-----TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTE
T ss_pred cCCCCCCCCCCCCCHHHhh-----cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhc
Confidence 4456677667666544321 15799999999 68999999983 44789999999999999955 4667
Q ss_pred eecCcccccc----------ccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhh
Q 025228 104 ECSYPGSISN----------LLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEE 172 (256)
Q Consensus 104 ~~~~~~~~~~----------~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~ 172 (256)
+++....... ..++.++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+.++ ++|+..
T Consensus 90 s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~d~~~ 168 (433)
T 3ivy_A 90 SSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGR-LHDELQERAQKIAAEAAAAGSGDFVE 168 (433)
T ss_dssp ESTTTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHT-THHHHHHHHHHHHHHHHHHCEEEHHH
T ss_pred cCCcccccccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHHHhhCCCeeHHH
Confidence 6554322111 122468889999999999999999999999998 9999999999999998644 899877
Q ss_pred h--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 173 A--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 173 ~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+ ..+++++|+.+ ||.+.+ +...+.+.. ..++. ...|.....+..++..+ +.+++.+.|+++++++
T Consensus 169 ~~~~~~~~~vi~~l-~G~~~~-~~~~~~~~~----~~~~~--~~~p~~~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 235 (433)
T 3ivy_A 169 QVSCELPLQAIAGL-LGVPQE-DRGKLFHWS----NEMTG--NEDPEYAHIDPKASSAE----LIGYAMKMAEEKAKNP 235 (433)
T ss_dssp HTTSHHHHHHHHHH-HTCCHH-HHHHHHHHH----TTCSC--CCCGGGTTCCHHHHHHH----HHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHH-cCCCHH-HHHHHHHHH----HHHhc--cCCchhhhHHHHHHHHH----HHHHHHHHHHHHhcCC
Confidence 7 89999999996 897654 333333322 22221 11121111122333333 4444788888877654
No 34
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.83 E-value=2.4e-19 Score=147.59 Aligned_cols=185 Identities=11% Similarity=0.163 Sum_probs=128.1
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc--cccc-----cccCcccccc-cCchhH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP--GSIS-----NLLGKHSLLL-MKGSLH 128 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~~~~-----~~~g~~~l~~-~~g~~w 128 (256)
..++..+.+|+++||||+++++++.+.|+++||+++++|+.++ .+.++.. .... ..+| .|+++ .+|+.|
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~g~~w 86 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFG-QGLVSECNYERW 86 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESST-TSTTTCCCHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccC-CCcccCCChHHH
Confidence 5678889999999999999999999999999999999999643 2322211 1111 2234 46665 589999
Q ss_pred HHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc----cc-eeehhhh-hhHHHHHHHHHHcCCCChH---HHHHHHH
Q 025228 129 KRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT----DR-VLLMEEA-KKITFELTVKQLMSFDPNE---WTESLRK 199 (256)
Q Consensus 129 ~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~d~~~~-~~~~~~ii~~~~fG~~~~~---~~~~~~~ 199 (256)
+++|++++++|+.+++.+ +.+.+.+.++++++.+. ++ ++|+.+. ..+++|+|+.++||.+.+. ....+.+
T Consensus 87 ~~~Rr~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 165 (456)
T 3mdm_A 87 HKQRRVIDLAFSRSSLVS-LMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ 165 (456)
T ss_dssp HHHHHHHGGGGSHHHHHT-THHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHH
T ss_pred HHHHhhcccccCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHH
Confidence 999999999999999998 88988888888877663 23 8999999 9999999999999997653 1123333
Q ss_pred HHHHHHHhh----cccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhc
Q 025228 200 EYVLVIEGF----FTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRK 247 (256)
Q Consensus 200 ~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~ 247 (256)
.+..+.... ..+..++|.. .+..+...+..+.+..++.+.++++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~ 215 (456)
T 3mdm_A 166 AVKLMLEGITASRNTLAKFLPGK--RKQLREVRESIRFLRQVGRDWVQRRRE 215 (456)
T ss_dssp HHHHHHHHHHHHHHSCGGGCGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCchh--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332221 2233445532 112223333444555556777776654
No 35
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.83 E-value=2.9e-19 Score=144.90 Aligned_cols=190 Identities=10% Similarity=0.105 Sum_probs=135.9
Q ss_pred CCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeee-cCCC-EEEeeChHHHHHHHhhCCceeeecCccc
Q 025228 33 RLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHI-FGEP-TVFSADPETNRFILQNEGKLFECSYPGS 110 (256)
Q Consensus 33 ~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~~~~-~v~v~~p~~~~~il~~~~~~~~~~~~~~ 110 (256)
+.+|+|+.+|+.++.. .+++.++.+++ +||||+++.+ +|.+ .|+++||+++++|+.+ ..|+++....
T Consensus 8 ~~~~~~~~~p~~~~~~--------~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~ 76 (406)
T 1s1f_A 8 QAVPPVRDWPAVDLPG--------SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMD 76 (406)
T ss_dssp CCSCCEEECCCCCCCT--------TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTT
T ss_pred hhccCCCCCCCCcccc--------cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCC
Confidence 4567777788877721 68999999996 7999999986 5666 9999999999999975 3566553221
Q ss_pred -----ccc-ccC-cccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc-c-ceeehhhh--hhHHHH
Q 025228 111 -----ISN-LLG-KHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT-D-RVLLMEEA--KKITFE 179 (256)
Q Consensus 111 -----~~~-~~g-~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~~d~~~~--~~~~~~ 179 (256)
... ..+ +.++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+. + +++|+..+ ..++++
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~ 155 (406)
T 1s1f_A 77 RQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVER-VRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIA 155 (406)
T ss_dssp TTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHH-HHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHH
T ss_pred CCcccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHH
Confidence 112 222 468889999999999999999999999998 99999999999999886 3 38999876 579999
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 180 LTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 180 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+|+. +||.+.++ .+.+......++.... + + . ...+..+.+.+++.+.|+++++++
T Consensus 156 vi~~-~~G~~~~~-~~~~~~~~~~~~~~~~--~---~----~----~~~~~~~~~~~~~~~~i~~r~~~~ 210 (406)
T 1s1f_A 156 VICE-LMGVPATD-RHSMHTWTQLILSSSH--G---A----E----VSERAKNEMNAYFSDLIGLRSDSA 210 (406)
T ss_dssp HHHH-HHTCCGGG-HHHHHHHHHHHHHHHT--T---C----C----CCHHHHTHHHHHHHHHHHTSCCSC
T ss_pred HHHH-HhCCCHHH-HHHHHHHHHHHHhccC--C---H----H----HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999 58997753 2334344333333211 1 1 1 112223334455778888777653
No 36
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.83 E-value=2.6e-19 Score=145.45 Aligned_cols=192 Identities=9% Similarity=0.096 Sum_probs=131.6
Q ss_pred CCCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHc-CCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCc-c
Q 025228 33 RLPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRF-GSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYP-G 109 (256)
Q Consensus 33 ~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~-g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-~ 109 (256)
..||+|+++|.+.....+. .+++.++.++ ++| |||+++++ ++.+.|+++||+++++|+.++. ++++.. .
T Consensus 5 ~~~~~~~~~P~~~~~~~~~-----~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~ 76 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCP-----YQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDD 76 (412)
T ss_dssp ---CCCCSSCBSSCCCSST-----TSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTST
T ss_pred CCCCCCCCCCCCCCCchhc-----cChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccc
Confidence 4577777777552211122 5789999999 688 99999998 7889999999999999997642 443322 1
Q ss_pred cccc-------cc-CcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehhhh-h-hHH
Q 025228 110 SISN-------LL-GKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEA-K-KIT 177 (256)
Q Consensus 110 ~~~~-------~~-g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~-~-~~~ 177 (256)
.... .. +..++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+.. +++|+.+. . .++
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~ 155 (412)
T 2zbx_A 77 NFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKG-MRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVP 155 (412)
T ss_dssp TSCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHH-HHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHH
T ss_pred cccccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 1111 11 2347888999999999999999999999998 999999999999988853 48999988 5 599
Q ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 178 FELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 178 ~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+++++. +||.+.++ .+.+.+.+..++. .+ + . .+..++.. .+.+++.+.|+++++++
T Consensus 156 ~~vi~~-~~G~~~~~-~~~~~~~~~~~~~----~~---~--~-~~~~~~~~----~~~~~~~~~i~~r~~~~ 211 (412)
T 2zbx_A 156 SMVICR-LLGVPYAD-HEFFQDASKRLVQ----ST---D--A-QSALTARN----DLAGYLDGLITQFQTEP 211 (412)
T ss_dssp HHHHHH-HHTCCGGG-HHHHHHHHHHHHH----CS---S--H-HHHHHHHH----HHHHHHHHHHHHHHHSC
T ss_pred HHHHHH-HcCCCHHH-HHHHHHHHHHHhc----cC---c--H-HHHHHHHH----HHHHHHHHHHHHHHhCC
Confidence 999997 68997653 3344444443332 11 1 1 22233333 34444777777776543
No 37
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.82 E-value=1.7e-19 Score=149.10 Aligned_cols=161 Identities=17% Similarity=0.318 Sum_probs=120.4
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHhhhcC-CchHHHHHHHHHcCC-ceEeeecCCC-------EEEeeChHHHHHHHhh-
Q 025228 29 SRRLRLPPGSLGLPFLGETLQLIAAYKTE-NPEPFIDVRVKRFGS-IFTTHIFGEP-------TVFSADPETNRFILQN- 98 (256)
Q Consensus 29 ~~~~~~ppgp~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~-v~~~~~~~~~-------~v~v~~p~~~~~il~~- 98 (256)
..+.+.+|||+++|++|++.++....... +++.++.+++++||+ ||++++++.+ .|++++.+..+.++..
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 45667789999999999999886543345 789999999999999 9999986443 3444555544444421
Q ss_pred ---CCceeeecCccccccccC---cccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-----ce
Q 025228 99 ---EGKLFECSYPGSISNLLG---KHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-----RV 167 (256)
Q Consensus 99 ---~~~~~~~~~~~~~~~~~g---~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~ 167 (256)
+...+....+... ..+| ..+++..+|+.|+++|++++++|++ ++.. +.+.+.+.++++++.|.. ++
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~-~~~~-~~~~i~~~~~~ll~~~~~~~~~~~~ 161 (473)
T 3dan_A 85 KVEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKN-SSNR-VIPQFETTYTELFEGLEAELAKNGK 161 (473)
T ss_dssp TEECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ceeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHhccCCc
Confidence 1111211222111 3444 3456778899999999999999999 4777 999999999999998863 48
Q ss_pred eehhhh-hhHHHHHHHHHHcCCCChH
Q 025228 168 LLMEEA-KKITFELTVKQLMSFDPNE 192 (256)
Q Consensus 168 ~d~~~~-~~~~~~ii~~~~fG~~~~~ 192 (256)
+|+.+. ..+++++++.++||.+.++
T Consensus 162 vdl~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 162 AAFNDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp EECHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999 9999999999999997764
No 38
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.82 E-value=1.5e-19 Score=146.87 Aligned_cols=200 Identities=9% Similarity=0.016 Sum_probs=137.7
Q ss_pred cccCCCCCCCCCCCCcc--chHHHHHHhh-hcCCchHHHHHHHHHcC--CceEeeecCCCEEEeeChHHHHHHHhhCCce
Q 025228 28 RSRRLRLPPGSLGLPFL--GETLQLIAAY-KTENPEPFIDVRVKRFG--SIFTTHIFGEPTVFSADPETNRFILQNEGKL 102 (256)
Q Consensus 28 ~~~~~~~ppgp~~~p~~--g~~~~~~~~~-~~~~~~~~~~~~~~~~g--~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~ 102 (256)
...+.++||||++.|.. +.+ ++.... ...+++.++.+++ +|| ||+++...| +.++++||+++++|+.+ ...
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~-~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~ 81 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDF-DMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRH 81 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCC-CTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTT
T ss_pred ccCccccCCCCCCCCccccccc-CcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccc
Confidence 45677899999988864 432 111110 1257889999996 799 999998333 69999999999999964 456
Q ss_pred eeecC-ccc-cccccCccc-ccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhH
Q 025228 103 FECSY-PGS-ISNLLGKHS-LLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKI 176 (256)
Q Consensus 103 ~~~~~-~~~-~~~~~g~~~-l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~ 176 (256)
|+++. ... ....+| .+ +++.+|+.|+++|++++++|++.+++. +.+.+.+.++++++.+... ++|+.++ ..+
T Consensus 82 f~~~~~~~~~~~~~~~-~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~ 159 (415)
T 2zwu_A 82 FSSECPFIPREAGEAY-DFIPTSMDPPEQRQFRALANQVVGMPVVDK-LENRIQELACSLIESLRPQGQCNFTEDYAEPF 159 (415)
T ss_dssp EETTSCSSSHHHHHHC-CCTTTTCCTTTTHHHHHHHHHHHSHHHHHH-HHHHHHHHHHHHHHHHGGGTEEEHHHHTTTHH
T ss_pred cCCCcccCCCCccccc-cccCccCCCcHHHHHHHHHHhhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence 76654 111 112223 46 888999999999999999999999998 9999999999999988655 8999975 789
Q ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 177 TFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 177 ~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
++++|+.+ ||.+.++ .+++.+.+..++.. ..|. +..++..+ +.+++.+.|+++++++
T Consensus 160 ~~~vi~~~-~G~~~~~-~~~~~~~~~~~~~~------~~P~----~~~~~~~~----~~~~~~~~i~~r~~~~ 216 (415)
T 2zwu_A 160 PIRIFMLL-AGLPEED-IPHLKYLTDQMTRP------DGSM----TFAEAKEA----LYDYLIPIIEQRRQKP 216 (415)
T ss_dssp HHHHHHHH-HTCCGGG-HHHHHHHHHHHHSC------CSSS----CHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHH-cCCCHHH-HHHHHHHHHHHHhc------cCHH----HHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 99999999 9998763 33444444433321 1132 22233333 4444777787776543
No 39
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.82 E-value=2.1e-19 Score=149.56 Aligned_cols=154 Identities=16% Similarity=0.153 Sum_probs=115.7
Q ss_pred ccccCCCCCCCCCC-CCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCc--ee
Q 025228 27 SRSRRLRLPPGSLG-LPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGK--LF 103 (256)
Q Consensus 27 ~~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~--~~ 103 (256)
..+++.+.||||++ +|++||++++. .+++.++.+++++|||||++++++.++++++||+++++++.++.. .+
T Consensus 12 ~~~~~~~~PPgp~~~~P~iG~~~~~~-----~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~ 86 (498)
T 3b6h_A 12 RRTRRPGEPPLDLGSIPWLGYALDFG-----KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDF 86 (498)
T ss_dssp -CCCCTTCCCEECCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEEC
T ss_pred HhccCCCCCCCCCCCCcchhhHHHhc-----cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCc
Confidence 34455678999988 89999999886 457889999999999999999999999999999999999976553 23
Q ss_pred eecCccccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc----cc--eeehhhh-hhH
Q 025228 104 ECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT----DR--VLLMEEA-KKI 176 (256)
Q Consensus 104 ~~~~~~~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~--~~d~~~~-~~~ 176 (256)
.+.....+...+| .+++..+|+.| |+++.++|+.++++. +.+.+.+.+.+.++... .. .+++... ..+
T Consensus 87 ~~~~~~~~~~~~g-~~~~~~~~~~~---rr~~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~v 161 (498)
T 3b6h_A 87 HAYAIFLMERIFD-VQLPHYSPSDE---KARMKLTLLHRELQA-LTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSF 161 (498)
T ss_dssp CHHHHHHHHHTSC-CCCTTCCHHHH---HHHHHTTSSHHHHHH-HHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHH
T ss_pred hhhHHHHHHHHcC-CCccccCHHHH---HHHHHHhhchHhHHH-HHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHH
Confidence 2222222334455 35666777776 566778999988887 76666666655555431 12 5788888 999
Q ss_pred HHHHHHHHHcCCCC
Q 025228 177 TFELTVKQLMSFDP 190 (256)
Q Consensus 177 ~~~ii~~~~fG~~~ 190 (256)
++++++.++||.+.
T Consensus 162 i~~~~~~~~fG~~~ 175 (498)
T 3b6h_A 162 LLRAGYLTLYGIEA 175 (498)
T ss_dssp HHHHHHHHHHCBSC
T ss_pred HHHHHHHhhcCccc
Confidence 99999999999853
No 40
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.81 E-value=8.8e-20 Score=150.92 Aligned_cols=151 Identities=15% Similarity=0.185 Sum_probs=117.5
Q ss_pred ccCCCCCCCCCC-CCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeec-
Q 025228 29 SRRLRLPPGSLG-LPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECS- 106 (256)
Q Consensus 29 ~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~- 106 (256)
+.+.+.||||++ +|++||++++. .+++.++.+++++||||+++++++.++++++||+++++++.++.. ++.+
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~-----~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~ 87 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFG-----KDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTS 87 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHH-----HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHh-----hCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchH
Confidence 445568999987 99999999886 468999999999999999999999999999999999999976542 3322
Q ss_pred -CccccccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-----c--eeehhhh-hhHH
Q 025228 107 -YPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-----R--VLLMEEA-KKIT 177 (256)
Q Consensus 107 -~~~~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-----~--~~d~~~~-~~~~ 177 (256)
....+...+| .+++..+|+.| |++++++|+.+++.. +.+.+.+.+.++++.+.+ . .+++... ..++
T Consensus 88 ~~~~~~~~~~g-~~~~~~~~~~~---R~~~~~~f~~~~l~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (475)
T 3b98_A 88 YAQVLMKRIFN-MILPSHNPESE---KKRAEMHFQGASLTQ-LSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLL 162 (475)
T ss_dssp HHHHHHHHTTC-CCCTTCCHHHH---HHHHHHHTSHHHHHH-HHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCCCChHHH---HHHHHHHcChhhHHH-HHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHH
Confidence 1122334455 46667777765 678888999999998 888888888888776521 1 5677788 8888
Q ss_pred HHHHHHHHcCCCC
Q 025228 178 FELTVKQLMSFDP 190 (256)
Q Consensus 178 ~~ii~~~~fG~~~ 190 (256)
+++++...||.+.
T Consensus 163 ~~~~~~~~~g~~~ 175 (475)
T 3b98_A 163 FKTGYLTVFGAEN 175 (475)
T ss_dssp HHHHHHHHHCCTT
T ss_pred HHHhhhheeCCcc
Confidence 8888888899753
No 41
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.81 E-value=2.5e-18 Score=139.16 Aligned_cols=177 Identities=8% Similarity=0.012 Sum_probs=128.7
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccccccccCcccccccCchhHHHHHHHHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTM 136 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~R~~~~ 136 (256)
.+++.++.++++ ||||+++. .+.|+++||+++++|+.+. ..|+++........ ++.++++.+|+.|+++|++++
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~-~~~~l~~~~g~~h~~~R~~~~ 91 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIRPDQP-ALPMMIDMDDPAHLLRRKLVN 91 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSSTTSC-CCSSGGGCCTTHHHHHHHHHG
T ss_pred cChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccCCccc-ccccccccCchHHHHHHHHhh
Confidence 678999999986 99999764 3799999999999999664 46766543221222 346888899999999999999
Q ss_pred hhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhccccc
Q 025228 137 SFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPL 213 (256)
Q Consensus 137 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (256)
++|++++++. +.+.+.+.++++++.+..+ ++|+... ..+++++|+.+ ||.+.++ .+++.+....+.... .|.
T Consensus 92 ~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-~~~~~~~~~~~~~~~--~~~ 166 (398)
T 2xkr_A 92 AGFTRKRVKD-KEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDM-LGVRPEQ-RDMFLRWSDDLVTFL--SSH 166 (398)
T ss_dssp GGSCHHHHHT-THHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHHHHH--TSC
T ss_pred hhhCHHHHHH-HHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH-HHHHHHHHHHHHhcc--Ccc
Confidence 9999999998 9999999999999998755 8999955 68999999999 9997753 334444444444322 233
Q ss_pred CCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 214 PIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 214 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
++|. .+.+..++ .+.+.+++.+.|+++++++
T Consensus 167 ~~p~-~~~~~~~~----~~~~~~~~~~~i~~r~~~~ 197 (398)
T 2xkr_A 167 VSQE-DFQITMDA----FAAYNDFTRATIAARRADP 197 (398)
T ss_dssp CCHH-HHHHHHHH----HHHHHHHHHHHHHHHHHSC
T ss_pred cchh-hHHHHHHH----HHHHHHHHHHHHHHHHhCC
Confidence 4431 22222333 3344555788888777643
No 42
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.81 E-value=2e-18 Score=139.95 Aligned_cols=178 Identities=12% Similarity=0.159 Sum_probs=130.4
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcccc-------ccccCcccccccCchhHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSI-------SNLLGKHSLLLMKGSLHK 129 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~-------~~~~g~~~l~~~~g~~w~ 129 (256)
.+++.++.+++ +||||++++.++.+.|++++|+++++++.++ ..|+++..... .... +.++++.+|+.|+
T Consensus 13 ~~p~~~~~~~r-~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTLR-AVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQ-NQMMLFQNQPDHR 89 (404)
T ss_dssp HCHHHHHHHHH-HHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHH-HTSGGGCCTTHHH
T ss_pred cCchHHHHHHH-hhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhh-hcchhhcCCchHH
Confidence 57889999885 8999999999999999999999999999765 56765543111 1223 3588999999999
Q ss_pred HHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Q 025228 130 RMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIE 206 (256)
Q Consensus 130 ~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~ 206 (256)
++|++++++|++++++. +.+.+.+.++++++.+.++ .+|+..+ ..+++++++.+ ||.+.++ .+.+.+....+..
T Consensus 90 ~~Rr~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~~~ 166 (404)
T 3ejb_B 90 RLRTLASGAFTPRTTES-YQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANI-IGVPEED-REQLKEWAASLIQ 166 (404)
T ss_dssp HHHHHHHGGGSHHHHHT-THHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHHG
T ss_pred HHHHHHHhhcCHHHHHH-HHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHH-cCCCHHH-HHHHHHHHHHHHH
Confidence 99999999999999998 9999999999999998766 8998766 67999999995 7987653 3344444433332
Q ss_pred hhcccccCCCCh--hhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 207 GFFTVPLPIFST--TYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 207 ~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
. ... |.. ...+..+ ..+.+.+++.+.|+++++++
T Consensus 167 ~-~~~----p~~~~~~~~~~~----~~~~~~~~~~~~i~~r~~~~ 202 (404)
T 3ejb_B 167 T-IDF----TRSRKALTEGNI----MAVQAMAYFKELIQKRKRHP 202 (404)
T ss_dssp G-GST----TCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHSC
T ss_pred h-ccC----CCCHHHHHHHHH----HHHHHHHHHHHHHHHHHhCC
Confidence 2 111 221 1222223 33444555888888877654
No 43
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.81 E-value=2.2e-18 Score=140.28 Aligned_cols=191 Identities=14% Similarity=0.151 Sum_probs=130.0
Q ss_pred hHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccc-cccc---------c
Q 025228 46 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS-ISNL---------L 115 (256)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~~~~---------~ 115 (256)
...++.......+++.++++++ +||||+++..+ .+++++|+++++|+.+ ...++++.... .... .
T Consensus 18 ~~~~~~~~~~~~~p~~~~~~lr-~~gpv~~~~~g---~~vv~~~~~v~~vl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (418)
T 3r9b_A 18 LLLQLLDPATRADPYPIYDRIR-RGGPLALPEAN---LAVFSSFSDCDDVLRH-PSSCSDRTKSTIFQRQLAAETQPRPQ 92 (418)
T ss_dssp HHHHHHSGGGTTCCHHHHHHHH-HHCCEEEGGGT---EEEECSHHHHHHHHHC-TTEECCGGGCHHHHHHHC--------
T ss_pred ccCCCCChhhccCchHHHHHHH-hcCCEEECCCC---eEEEecHHHHHHHHcC-cccccCcccccccccccccccccccc
Confidence 3444443333478999999985 88999988654 9999999999999965 34444333211 1111 2
Q ss_pred CcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChH
Q 025228 116 GKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNE 192 (256)
Q Consensus 116 g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~ 192 (256)
++.++++.+|+.|+++|++++++|+++++++ +.+.+.+.++++++ +.++ .+|+..+ ..+++++++. +||.+.++
T Consensus 93 ~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~-l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 169 (418)
T 3r9b_A 93 GPASFLFLDPPDHTRLRGLVSKAFAPRVIKR-LEPEITALVDQLLD-AVDGPEFNLIDNLAYPLPVAVICR-LLGVPIED 169 (418)
T ss_dssp -CCCGGGCCTTHHHHHHHHHHGGGSHHHHGG-GHHHHHHHHHHHHH-TCCSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred cccchhhcCCchHHHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHh-hhccCCeehHHHHhCcCCHHHHHH-HcCCCHHH
Confidence 3468899999999999999999999999998 99999999999999 8655 8998766 6899999999 78997753
Q ss_pred HHHHHHHHHHHHHHhhcccc--cCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 193 WTESLRKEYVLVIEGFFTVP--LPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
...+.+....+...+.... .+++.....+..++... +.+++.+.|+++++++
T Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~i~~r~~~~ 223 (418)
T 3r9b_A 170 -EPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMW----LRDYLRALIDERRRTP 223 (418)
T ss_dssp -HHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHH----HHHHHHHHHHHTTTSC
T ss_pred -HHHHHHHHHHHHhhcCccccccccCHHHHHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 2333333333322211111 11232333333444444 4444888888887654
No 44
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.81 E-value=2.6e-18 Score=138.42 Aligned_cols=175 Identities=13% Similarity=0.074 Sum_probs=126.9
Q ss_pred CCchHHHHHHHHHcCCceEeeecC----CCEEEeeChHHHHHHHhhCCceeeecCccccc--cccCcccccccCchhHHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFG----EPTVFSADPETNRFILQNEGKLFECSYPGSIS--NLLGKHSLLLMKGSLHKR 130 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~----~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~--~~~g~~~l~~~~g~~w~~ 130 (256)
.+++.++.+++ +||||++++.++ .+.|+++||+++++|+ ++...|+++...... ...+..++++.+|+.|++
T Consensus 12 ~~p~~~~~~lr-~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 89 (384)
T 3oo3_A 12 LDPVPEFEELQ-KAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAYDPPDHTR 89 (384)
T ss_dssp TEECHHHHHHH-HTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCCTTCGGGCCTTHHHH
T ss_pred cChhHHHHHHH-hcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccccccccccCCChhHHH
Confidence 67899999995 999999999876 8999999999999999 445678766543211 122345778889999999
Q ss_pred HHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc--cceeehhhh-hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHh
Q 025228 131 MHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT--DRVLLMEEA-KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEG 207 (256)
Q Consensus 131 ~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~-~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~ 207 (256)
+|++++++|++++++. +.+.+.+.++++++.+. ++++|+.+. ...+.++++..+||.+.++ .+++.+.+..++.
T Consensus 90 ~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~-~~~~~~~~~~~~~- 166 (384)
T 3oo3_A 90 LRRTVAPAYSARRMER-LRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDD-QAELSRMIRESRE- 166 (384)
T ss_dssp HHHHHGGGGCHHHHHH-HHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGG-HHHHHHHHHHHHH-
T ss_pred HHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhc-
Confidence 9999999999999998 99999999999999884 338999999 8877777777789997653 2344444444433
Q ss_pred hcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 208 FFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 208 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.....+..++..++. +++.+.|+++++++
T Consensus 167 ---------~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~ 195 (384)
T 3oo3_A 167 ---------SRLPRQRTLSGLGIV----NYTKRLTSGKRRDP 195 (384)
T ss_dssp ---------CSCHHHHHHHHHHHH----HHHHHHHHHHHHSC
T ss_pred ---------cCChHHHHHHHHHHH----HHHHHHHHHHHhCC
Confidence 012233334444444 44777777776554
No 45
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.80 E-value=4e-18 Score=137.90 Aligned_cols=174 Identities=10% Similarity=0.039 Sum_probs=129.0
Q ss_pred CCchHHHHHHHHHc--CCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcccc--ccccCcccccccCchhHHHHH
Q 025228 57 ENPEPFIDVRVKRF--GSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSI--SNLLGKHSLLLMKGSLHKRMH 132 (256)
Q Consensus 57 ~~~~~~~~~~~~~~--g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~--~~~~g~~~l~~~~g~~w~~~R 132 (256)
.+++.++.+++++| |||+++..++ +.++++||+++++|+ ++.+.|+++..... ....+..++++.+|+.|+++|
T Consensus 19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R 96 (398)
T 4fb2_A 19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKYR 96 (398)
T ss_dssp SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHHHH
T ss_pred cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcccccCcccCCchHHHHHH
Confidence 67899999999999 9999998876 599999999999999 45567776654222 122334567889999999999
Q ss_pred HHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhc
Q 025228 133 SLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFF 209 (256)
Q Consensus 133 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 209 (256)
++++++|+++++.. +.+.+.+.++++++.+.+. .+|+..+ ..+++++++. +||.+.+ +.+++.+.+..++..
T Consensus 97 ~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-~~~~~~~~~~~~~~~-- 171 (398)
T 4fb2_A 97 QLVAKPFSPEATDL-FTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAI-LLGLPPE-DGDTYRRWVWAITHV-- 171 (398)
T ss_dssp HHHHTTTCHHHHHT-THHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHH-HTTSCGG-GHHHHHHHHHHHHHC--
T ss_pred HHHHHhhCHHHHHH-HHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH-HcCCCHH-HHHHHHHHHHHHhcC--
Confidence 99999999999998 9999999999999998765 8898666 6899999999 6898765 334454555444431
Q ss_pred ccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 210 TVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 210 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.. ..+..++..++ .+++.+.|+++++++
T Consensus 172 -------~~-~~~~~~~~~~~----~~~~~~~i~~r~~~~ 199 (398)
T 4fb2_A 172 -------EN-PEEGAEIFAEL----VAHARTLIAERRTNP 199 (398)
T ss_dssp -------CC-HHHHHHHHHHH----HHHHHHHHHHHHHSC
T ss_pred -------CC-HHHHHHHHHHH----HHHHHHHHHHHHhCC
Confidence 11 12233344444 444777787777654
No 46
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.80 E-value=2.4e-18 Score=140.33 Aligned_cols=180 Identities=14% Similarity=0.096 Sum_probs=124.1
Q ss_pred CCchHHHHHHHHHcCCceEeeec--CCCEEEeeChHHHHHHHhhCCceeeecCcc----------ccc------cccCcc
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIF--GEPTVFSADPETNRFILQNEGKLFECSYPG----------SIS------NLLGKH 118 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~--~~~~v~v~~p~~~~~il~~~~~~~~~~~~~----------~~~------~~~g~~ 118 (256)
.+++.++.+++ +||||+++++| +.+.++++||+.+++|+.++ .|+++... ... ..+++.
T Consensus 20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 57899999987 59999999987 78899999999999999764 57655321 111 112236
Q ss_pred cccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHH
Q 025228 119 SLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTE 195 (256)
Q Consensus 119 ~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~ 195 (256)
++++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+... ++|+..+ ..+++++|+.+ ||.+.++ .+
T Consensus 97 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~-~G~~~~~-~~ 173 (425)
T 2z3t_A 97 WLVFLDPPHHTELRSLLTTEFSPSIVTG-LRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISAL-LGIPEED-HT 173 (425)
T ss_dssp CGGGCCHHHHHHHHHHHHGGGSHHHHHH-HHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHH-HTCCGGG-HH
T ss_pred ccccCCchHHHHHHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH-HH
Confidence 8888999999999999999999999998 9999999999999998755 8999875 78999999998 8997753 23
Q ss_pred HHHHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcc
Q 025228 196 SLRKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKE 248 (256)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 248 (256)
.+.+....+...+..++ ++...+.+..++. +.+.+++.+.|++++++
T Consensus 174 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~i~~r~~~ 220 (425)
T 2z3t_A 174 WLRANAVALQEASTTRA--RDGRGYARAEAAS----QEFTRYFRREVDRRGGD 220 (425)
T ss_dssp HHHHHHHHHHTTCTTCC--C---HHHHHHHHH----HHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHhhccccC--CCHHHHHHHHHHH----HHHHHHHHHHHHHHHhC
Confidence 33333333332111111 1211222222333 33444577777777654
No 47
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.80 E-value=5.2e-18 Score=138.12 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=128.6
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc-----cc-c--ccccC---cccccccCc
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP-----GS-I--SNLLG---KHSLLLMKG 125 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-----~~-~--~~~~g---~~~l~~~~g 125 (256)
.+++.++.++ ++||||++ . ++.+.|+++||+++++|+.++. |+++.. .. . ...++ +.++++.+|
T Consensus 26 ~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 100 (419)
T 1q5d_A 26 EDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLPP 100 (419)
T ss_dssp TCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSCH
T ss_pred hChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCCc
Confidence 5789999999 58999998 5 7789999999999999997653 766541 11 1 11222 357888999
Q ss_pred hhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhh-h-hhHHHHHHHHHHcCCCChHHHHHHHHHHH
Q 025228 126 SLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEE-A-KKITFELTVKQLMSFDPNEWTESLRKEYV 202 (256)
Q Consensus 126 ~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~-~-~~~~~~ii~~~~fG~~~~~~~~~~~~~~~ 202 (256)
+.|+++|++++++|++++++. +.+.+.+.++++++.+.++ ++|+.. . ..+++++|+.+ ||.+.++ .+.+.+...
T Consensus 101 ~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-~~~~~~~~~ 177 (419)
T 1q5d_A 101 EDHARVRKLVNPSFTSRAIDL-LRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISAL-LKVPAEC-DEKFRRFGS 177 (419)
T ss_dssp HHHHHHHHHHGGGGSHHHHGG-GHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHH-TTCCGGG-HHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-hCCCHHH-HHHHHHHHH
Confidence 999999999999999999998 9999999999999998755 899986 4 79999999998 9997753 233444444
Q ss_pred HHHHhhcccccCCCCh--hhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 203 LVIEGFFTVPLPIFST--TYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 203 ~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+..... +.++|.. .+.+..++ .+.+.+++.+.|+++++++
T Consensus 178 ~~~~~~~--~~~~P~~~~~~~~~~~~----~~~~~~~~~~~i~~r~~~~ 220 (419)
T 1q5d_A 178 ATARALG--VGLVPRVDEETKTLVAS----VTEGLALLHGVLDERRRNP 220 (419)
T ss_dssp HHHHHTT--TTTSSCCCSCHHHHHHH----HHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhcc--cccccCChHHHHHHHHH----HHHHHHHHHHHHHHHHhCC
Confidence 4433221 2233321 12222333 3344555788888777654
No 48
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.80 E-value=1.6e-18 Score=141.20 Aligned_cols=180 Identities=9% Similarity=-0.071 Sum_probs=129.7
Q ss_pred CCchHHHHHHHHHcC-CceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccccc--cccCcccccccCchhHHHHHH
Q 025228 57 ENPEPFIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSIS--NLLGKHSLLLMKGSLHKRMHS 133 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~--~~~g~~~l~~~~g~~w~~~R~ 133 (256)
.+++.++.++++++| ||+++..++ +.++++||+++++|+. +.+.|+++...... ...++.++++.+|+.|+++|+
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R~ 115 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRK 115 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHHH
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCccCCcHHHHHHHH
Confidence 578999999986655 899988765 5999999999999994 45677665432111 111235788899999999999
Q ss_pred HHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc
Q 025228 134 LTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFT 210 (256)
Q Consensus 134 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 210 (256)
+++++|+++++++ +.+.+.+.++++++.+.++ .+|+..+ ..++.++++.+ ||.+.+ +..++.+.+..++ .
T Consensus 116 ~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~-~G~~~~-~~~~~~~~~~~~~----~ 188 (421)
T 3lxh_A 116 AIDKGLNLAEIRK-LEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLAL-AGLPVE-DATKLGLLANEMT----R 188 (421)
T ss_dssp HHHHHHSHHHHHT-THHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHHH-HTCCGG-GHHHHHHHHHHHH----S
T ss_pred HHhhhcCHHHHHH-HHHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHHH-cCCCHH-HHHHHHHHHHHHh----c
Confidence 9999999999998 9999999999999998765 8998666 67888888875 798765 3344444444433 2
Q ss_pred cccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 211 VPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 211 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
...++|.....+..++..++ .+++.+.|+++++++
T Consensus 189 ~~~~~p~~~~~~~~~~~~~~----~~~~~~~i~~r~~~~ 223 (421)
T 3lxh_A 189 PSGNTPEEQGRSLEAANKGF----FEYVAPIIAARRGGS 223 (421)
T ss_dssp CCCSSHHHHHHHHHHHHHHH----HHHHHHHHHHHTTCC
T ss_pred cccCCCchhHHHHHHHHHHH----HHHHHHHHHHHHhCC
Confidence 23344543344444444444 444888888887654
No 49
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.79 E-value=5.5e-18 Score=137.55 Aligned_cols=174 Identities=9% Similarity=0.038 Sum_probs=125.3
Q ss_pred CCchHHHHHHHHHcCCceEeeecC--CCEEEeeChHHHHHHHhhCCceeeecCcc-----ccccccC--cccccccCchh
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFG--EPTVFSADPETNRFILQNEGKLFECSYPG-----SISNLLG--KHSLLLMKGSL 127 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~--~~~v~v~~p~~~~~il~~~~~~~~~~~~~-----~~~~~~g--~~~l~~~~g~~ 127 (256)
.+++.++.+++ +||||+++.+++ .+.+++++|+++++|+.+ ..|+++... .+....| +.++++.+|+.
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 103 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFADQPD 103 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTH
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCCchH
Confidence 45568999998 899999998754 789999999999999965 356554321 1223333 46888899999
Q ss_pred HHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-c-eeehhhh-h-hHHHHHHHHHHcCCCChHHHHHHHHHHHH
Q 025228 128 HKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-R-VLLMEEA-K-KITFELTVKQLMSFDPNEWTESLRKEYVL 203 (256)
Q Consensus 128 w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~d~~~~-~-~~~~~ii~~~~fG~~~~~~~~~~~~~~~~ 203 (256)
|+++|++++++|++++++. +.+.+.+.++++++.+.. + ++|+.++ . .+++++|+. +||.+.++ .+. +..
T Consensus 104 h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-~~~----~~~ 176 (411)
T 2dkk_A 104 HNRLRRAVAGAFTVGATKR-LRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSE-VMGVPAAD-RER----VHS 176 (411)
T ss_dssp HHHHHHHHGGGSSHHHHHH-HHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH-HHH----HHH
T ss_pred HHHHHHHhhHhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-HHH----HHH
Confidence 9999999999999999998 999999999999998853 3 8999977 5 799999999 58997763 222 333
Q ss_pred HHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 204 VIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 204 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+...+.... + .+.+..++..+ +.+++.++|+++++++
T Consensus 177 ~~~~~~~~~---~--~~~~~~~~~~~----l~~~~~~~i~~r~~~~ 213 (411)
T 2dkk_A 177 WTRQIISTS---G--GAEAAERAKRG----LYGWITETVRARAGSE 213 (411)
T ss_dssp HHGGGCSSC---S--CSHHHHHHHHH----HHHHHHHHHHTTTTCC
T ss_pred HHHHHHhcc---c--hHHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 333332211 1 22333333444 4444888888877654
No 50
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.79 E-value=2.7e-18 Score=140.61 Aligned_cols=180 Identities=13% Similarity=0.139 Sum_probs=119.4
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc-ccccccCcccccccCchhHHHHHHHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG-SISNLLGKHSLLLMKGSLHKRMHSLT 135 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~~~~~~g~~~l~~~~g~~w~~~R~~~ 135 (256)
.+|+.++++++ +||||+++..++ .+++++|+++++||.+.. .|+++... .....+|..++++.+|+.|+++|+++
T Consensus 53 ~~p~~~~~~lr-~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~ 128 (441)
T 3nc3_A 53 NNPYAYFSQLR-EEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIV 128 (441)
T ss_dssp HCGGGTHHHHH-HHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSCC-------------CCHHHH
T ss_pred cChHHHHHHHH-hcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccccCCCccccCCcHHHHHHHHHH
Confidence 57899998875 899999986555 899999999999997654 47655442 22344555568899999999999999
Q ss_pred HhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccc
Q 025228 136 MSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVP 212 (256)
Q Consensus 136 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (256)
+++|++++++. +.+.+.+.++++++.+.++ .+|+..+ ..+++++++. +||.+.++ .+.+.+....+......+
T Consensus 129 ~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-~~~~~~~~~~~~~~~~~~- 204 (441)
T 3nc3_A 129 VRSFIGDALDH-LSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMD-MLGLDKRD-HEKISEWHSGVADFITSI- 204 (441)
T ss_dssp HHHHHHTHHHH-HHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHH-HTTCCGGG-HHHHHHHHHHHHHHHHCS-
T ss_pred HhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHHHhcccc-
Confidence 99999999998 9999999999999998766 8998766 5699999999 57987653 344444444444332211
Q ss_pred cCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 213 LPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 213 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
..+.....+..++ .+.+.+++.+.|+++++++
T Consensus 205 -~~~~~~~~~~~~~----~~~l~~~~~~~i~~rr~~~ 236 (441)
T 3nc3_A 205 -SQSPEARAHSLWC----SEQLSQYLMPVIKERRVNP 236 (441)
T ss_dssp -CCCHHHHHHHHHH----HHHHHHHHHHHHHHHTTSC
T ss_pred -cCChHHHHHHHHH----HHHHHHHHHHHHHHHHhCC
Confidence 1121112222333 3444555888888887654
No 51
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.79 E-value=7.9e-18 Score=136.76 Aligned_cols=178 Identities=11% Similarity=0.017 Sum_probs=127.8
Q ss_pred CCchHHHHHHHHHcCCceEeeecC--CCEEEeeChHHHHHHHhhCCceeeecCcccccc----cc-C-cccccccCchhH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFG--EPTVFSADPETNRFILQNEGKLFECSYPGSISN----LL-G-KHSLLLMKGSLH 128 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~--~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~----~~-g-~~~l~~~~g~~w 128 (256)
.+|+.++.++++ ||||+++...| .+.++|++++++++|+++ .+.|+++....... .. + +.++++.+|+.|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCccccCcHHH
Confidence 478999999985 99999986445 789999999999999944 55677654322221 11 1 357888999999
Q ss_pred HHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Q 025228 129 KRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVI 205 (256)
Q Consensus 129 ~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~ 205 (256)
+++|++++++|+++++++ +.+.+.+.++++++.+.++ ++|+..+ ..+++++|+.+ ||.+.++ .+.+.+....+.
T Consensus 115 ~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-~~~~~~~~~~~~ 191 (415)
T 3mgx_A 115 RKLRKLVGPLLSRAAARK-LAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCEI-LGVPAED-EDMLIDLTNHAF 191 (415)
T ss_dssp HHHHHHHGGGSSHHHHHH-SHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHT
T ss_pred HHHHHHhHhhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHH-cCCCHHH-HHHHHHHHHHHH
Confidence 999999999999999998 9999999999999998765 8999987 56999999985 7986653 344444444443
Q ss_pred HhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 206 EGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 206 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.. ..+.+.|.. ..++.. .+.+++.+.|+++++++
T Consensus 192 ~~--~~~~~~~~~----~~~~~~----~l~~~~~~~i~~rr~~~ 225 (415)
T 3mgx_A 192 GG--EDELFDGMT----PRQAHT----EILVYFDELITARRKEP 225 (415)
T ss_dssp SC--CC----CCC----HHHHHH----HHHHHHHHHHHHHHHSC
T ss_pred cc--cCcccchHH----HHHHHH----HHHHHHHHHHHHHHhCC
Confidence 21 112222211 123333 34445888888887654
No 52
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.79 E-value=5.3e-18 Score=137.46 Aligned_cols=175 Identities=8% Similarity=0.082 Sum_probs=127.5
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc-------c------c-ccc--cCcccc
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG-------S------I-SNL--LGKHSL 120 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-------~------~-~~~--~g~~~l 120 (256)
.+++.++.++ ++||||+++++++.+.|++++|+++++++.++ .|+++... . + ... .++.++
T Consensus 14 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 90 (404)
T 1z8o_A 14 VDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNM 90 (404)
T ss_dssp SSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSSG
T ss_pred cCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccccc
Confidence 5788899999 89999999999888899999999999999765 46655321 1 1 111 123578
Q ss_pred cccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHH
Q 025228 121 LLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESL 197 (256)
Q Consensus 121 ~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~ 197 (256)
++.+|+.|+++|++++++|++++++. +.+.+.+.++++++.+..+ ++|+..+ ..+++++|+.+ ||.+.++ .+.+
T Consensus 91 ~~~~g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~ 167 (404)
T 1z8o_A 91 GTSDPPTHTRLRKLVSQEFTVRRVEA-MRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICEL-LGVDEKY-RGEF 167 (404)
T ss_dssp GGCCTTHHHHHHHHHHTTSCHHHHHH-THHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-TTTH
T ss_pred ccCCCcHHHHHHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHHH-hCCCHHH-HHHH
Confidence 88999999999999999999999998 9999999999999998655 8999865 68999999985 8987653 2233
Q ss_pred HHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 198 RKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+.+..++. .. .|. ..+..++.. .+.+++.+.|+++++++
T Consensus 168 ~~~~~~~~~--~~----~p~--~~~~~~~~~----~~~~~~~~~i~~r~~~~ 207 (404)
T 1z8o_A 168 GRWSSEILV--MD----PER--AEQRGQAAR----EVVNFILDLVERRRTEP 207 (404)
T ss_dssp HHHHHHHHC--CC----GGG--HHHHHHHHH----HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhc--cC----Chh--HHHHHHHHH----HHHHHHHHHHHHHHhCC
Confidence 333333332 11 121 223333333 34445778888777654
No 53
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.79 E-value=9.7e-18 Score=136.14 Aligned_cols=172 Identities=10% Similarity=0.105 Sum_probs=126.6
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccc--------cccccCcccccccCchhH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS--------ISNLLGKHSLLLMKGSLH 128 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~--------~~~~~g~~~l~~~~g~~w 128 (256)
.+++.++.++ ++||||+++++++.+.|++++|+++++++.++. |+++.... +... ++.++++.+|+.|
T Consensus 20 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~~h 95 (411)
T 3a4g_A 20 QNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPAT-PTPMMILMDPPDH 95 (411)
T ss_dssp TCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSC-SSCCGGGCCTTHH
T ss_pred cCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcc-cccccccCCchHH
Confidence 6789999999 799999999998889999999999999997653 76553211 1121 2467888999999
Q ss_pred HHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Q 025228 129 KRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVI 205 (256)
Q Consensus 129 ~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~ 205 (256)
+++|++++++|+++++++ +.+.+.+.++++++.+.++ ++|+... ..+++++|+.+ ||.+.++ .+.+.+....++
T Consensus 96 ~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~~ 172 (411)
T 3a4g_A 96 TRLRKLVGRSFTVRRMNE-LEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICEL-LGVPAED-RDDFSAWSSVLV 172 (411)
T ss_dssp HHHHHHHHTTCCHHHHHH-HHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHH-HTCCGGG-HHHHHHHHHHHT
T ss_pred HHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHH-hCCCHHH-HHHHHHHHHHHh
Confidence 999999999999999998 9999999999999998764 8999754 78999999975 8997753 233433333332
Q ss_pred HhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 206 EGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 206 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.. .| + .+..++..+ +.+++.+.|+++++++
T Consensus 173 ~~-------~p--~-~~~~~~~~~----~~~~~~~~i~~r~~~~ 202 (411)
T 3a4g_A 173 DD-------SP--A-DDKNAAMGK----LHGYLSDLLERKRTEP 202 (411)
T ss_dssp TS-------SC--T-TTHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred cc-------CC--H-HHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 21 12 1 122233333 4444777777776543
No 54
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.78 E-value=6.3e-18 Score=136.94 Aligned_cols=174 Identities=14% Similarity=0.124 Sum_probs=125.6
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCc----cc---cccccCcccccccCchhH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYP----GS---ISNLLGKHSLLLMKGSLH 128 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~----~~---~~~~~g~~~l~~~~g~~w 128 (256)
.+++.++.++ ++||||+++++ ++.+.|+++||+++++|+.++ .|+++.. .. +....++.++++.+|+.|
T Consensus 19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 95 (403)
T 3aba_A 19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPEH 95 (403)
T ss_dssp TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTHH
T ss_pred cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCchhH
Confidence 5788899999 79999999997 788999999999999999764 3655421 11 222223467888999999
Q ss_pred HHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc-c-ceeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Q 025228 129 KRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT-D-RVLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLV 204 (256)
Q Consensus 129 ~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~ 204 (256)
+++|++++++|++.++++ +.+.+.+.++++++.+. + +++|+..+ ..+++++|+. +||.+.++ .+.+.+....+
T Consensus 96 ~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~~~~ 172 (403)
T 3aba_A 96 TSDRKLLAKEFTVRRMQA-LRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISD-LFGVPVER-RAEFQDIAEAM 172 (403)
T ss_dssp HHHHHHHHHHSCHHHHHT-THHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHHHHHHHHH
T ss_pred HHHHHHHHhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHH
Confidence 999999999999999998 99999999999998886 3 48999876 5799999998 68997653 23333333322
Q ss_pred HHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 205 IEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+... .+ + .+..++..+ +.+++.+.|+++++++
T Consensus 173 ----~~~~--~~--p-~~~~~~~~~----~~~~~~~~i~~r~~~~ 204 (403)
T 3aba_A 173 ----MRVD--QD--A-AATEAAGMR----LGGLLYQLVQERRANP 204 (403)
T ss_dssp ----SBSS--SC--H-HHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred ----Hhcc--Cc--H-HHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 2211 11 1 222333333 4445777787777653
No 55
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.78 E-value=2.6e-18 Score=141.14 Aligned_cols=185 Identities=10% Similarity=0.015 Sum_probs=127.7
Q ss_pred chHHHHHHHHHcCCce--Eee-ecCCCEEEeeChHHHHHHHhhCCceeeecCcccc-cc---------cc-----Ccccc
Q 025228 59 PEPFIDVRVKRFGSIF--TTH-IFGEPTVFSADPETNRFILQNEGKLFECSYPGSI-SN---------LL-----GKHSL 120 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~--~~~-~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~-~~---------~~-----g~~~l 120 (256)
|+.++.+++ +||||+ ++. .++.+.++|++++++++++++. ..|+++..... .. .. ...++
T Consensus 47 p~~~~~~lr-~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDALR-AEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHHH-HHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHHH-hcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 888999894 789999 887 6778999999999999999654 67776543221 10 01 12478
Q ss_pred cccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehhhh--hhHHHHHHHHHHcCCCChHHHHH
Q 025228 121 LLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEA--KKITFELTVKQLMSFDPNEWTES 196 (256)
Q Consensus 121 ~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~ 196 (256)
++.+|+.|+++|++++++|+++++++ +.+.+.+.++++++.+.. +++|+..+ ..+++++|+.+ ||.+.++ ...
T Consensus 125 ~~~dg~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-~~~ 201 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLTQDWFMPKNLAR-LDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQI-LGVPPED-EPK 201 (450)
T ss_dssp GGCCTTHHHHHHHHHHTTTSHHHHGG-GHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-HHH
T ss_pred ccCCCHHHHHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHH-cCCChhH-HHH
Confidence 88999999999999999999999998 999999999999998864 38998877 58999999996 8987653 344
Q ss_pred HHHHHHHHHHhhcc----cccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhcccc
Q 025228 197 LRKEYVLVIEGFFT----VPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEKN 250 (256)
Q Consensus 197 ~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 250 (256)
+.+....++..... .+.+++ .+....+...+..+.+.+++.+.|+++++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 257 (450)
T 3tkt_A 202 MLFLTQQMFGGQDEDMNKSGLKDL--PPEQISQIVAGAVAEFERYFAGLAAERRRNPT 257 (450)
T ss_dssp HHHHHHTTSCCC------------------HHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhccccchhhccccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44444333221111 111111 01111222333344455668888888877653
No 56
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.78 E-value=7.9e-18 Score=136.89 Aligned_cols=175 Identities=11% Similarity=0.125 Sum_probs=125.5
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCcc-c----cccccCcccccccCchhHHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYPG-S----ISNLLGKHSLLLMKGSLHKR 130 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~----~~~~~g~~~l~~~~g~~w~~ 130 (256)
.+++.++.++ ++||||+++++ ++.+.|+++||+++++|+.++ .|+++... . +....++.++++.+|+.|++
T Consensus 37 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~ 113 (417)
T 2y5n_A 37 LTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSR 113 (417)
T ss_dssp CCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHHH
T ss_pred cCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchHHHH
Confidence 5789999999 79999999997 789999999999999999764 35544321 1 22222346788899999999
Q ss_pred HHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc-cc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Q 025228 131 MHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT-DR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIE 206 (256)
Q Consensus 131 ~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~ 206 (256)
+|++++++|++++++. +.+.+.+.++++++.+. ++ ++|+..+ ..+++++|+. +||.+.++ .+.+.+.+ .
T Consensus 114 ~R~~l~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~----~ 186 (417)
T 2y5n_A 114 LRRLVVKAFTARRAES-LRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICE-LLGVPSAD-HDRFTRWS----G 186 (417)
T ss_dssp HHHHHHHHSCHHHHHH-THHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-HHHHHHHH----H
T ss_pred HHHHHhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH-HHHHHHHH----H
Confidence 9999999999999998 99999999999998875 44 7999976 5799999998 68997753 23333322 2
Q ss_pred hhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 207 GFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 207 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.++.... .| ..+..++..+ +.+++.+.|+++++++
T Consensus 187 ~~~~~~~-~~---~~~~~~~~~~----l~~~~~~~i~~r~~~~ 221 (417)
T 2y5n_A 187 AFLSTAE-VT---AEEMQEAAEQ----AYAYMGDLIDRRRKEP 221 (417)
T ss_dssp TTSTTCC-CC---HHHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHhcccC-CC---HHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 2222111 11 2222333333 4444777787776553
No 57
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.78 E-value=1.3e-17 Score=136.42 Aligned_cols=179 Identities=8% Similarity=0.035 Sum_probs=128.6
Q ss_pred CchHHHHHHHHHcCCceEeeec-------CCCEEEeeChHHHHHHHhhCCceeeecCcc----cccccc-CcccccccCc
Q 025228 58 NPEPFIDVRVKRFGSIFTTHIF-------GEPTVFSADPETNRFILQNEGKLFECSYPG----SISNLL-GKHSLLLMKG 125 (256)
Q Consensus 58 ~~~~~~~~~~~~~g~v~~~~~~-------~~~~v~v~~p~~~~~il~~~~~~~~~~~~~----~~~~~~-g~~~l~~~~g 125 (256)
+++.++.+++ +||||+++.++ +.+.|+++||+++++|+.++ ..|+++... ....+. .+.++++.+|
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg 122 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLDD 122 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCCT
T ss_pred ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCCc
Confidence 5788999996 79999999886 67899999999999999764 467665421 111211 1357888999
Q ss_pred hhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc--cc--eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHH
Q 025228 126 SLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT--DR--VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRK 199 (256)
Q Consensus 126 ~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~--~~--~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~ 199 (256)
+.|+++|++++++|++++++. +.+.+.+.++++++.+. ++ ++|+.++ ..+++++|+.+ ||.+.++ .+.+.+
T Consensus 123 ~~h~~~R~~l~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~ 199 (435)
T 2wm5_A 123 PRHQRLRSIVSRAFTPKVVAR-IEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD-HQRIFH 199 (435)
T ss_dssp THHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHH
T ss_pred HHHHHHHHHhHHhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH-HHHHHH
Confidence 999999999999999999998 99999999999888874 22 7999875 78999999999 9998763 334444
Q ss_pred HHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 200 EYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 200 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
....++... .|.+.+. +++..++..+ +.+++.+.|+++++++
T Consensus 200 ~~~~~~~~~--~p~~~~~--~~~~~~~~~~----~~~~~~~~i~~r~~~~ 241 (435)
T 2wm5_A 200 WTNVILGFG--DPDLATD--FDEFMQVSAD----IGAYATALAEDRRVNH 241 (435)
T ss_dssp HHHHHHHTT--CTTSCCC--HHHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHHHHhccC--Ccchhhh--HHHHHHHHHH----HHHHHHHHHHHHhcCC
Confidence 444443321 2333332 2333333334 4444778888777643
No 58
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.77 E-value=1.6e-17 Score=134.84 Aligned_cols=131 Identities=11% Similarity=0.094 Sum_probs=104.7
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCc---cc----ccc--ccCcccccccCch
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYP---GS----ISN--LLGKHSLLLMKGS 126 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~---~~----~~~--~~g~~~l~~~~g~ 126 (256)
.+++..+.++ ++||||+++++ ++.+.|+++||+++++|+.++. ++++.. .. +.. .....++++.+|+
T Consensus 24 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 100 (408)
T 3abb_A 24 YQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDDP 100 (408)
T ss_dssp TSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCCTT
T ss_pred cCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCCch
Confidence 5788999999 89999999998 7889999999999999997642 443321 11 111 0112478889999
Q ss_pred hHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehhhh-h-hHHHHHHHHHHcCCCChH
Q 025228 127 LHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEA-K-KITFELTVKQLMSFDPNE 192 (256)
Q Consensus 127 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~-~-~~~~~ii~~~~fG~~~~~ 192 (256)
.|+++|++++++|++++++. +.+.+.+.++++++.+.. +++|+.+. . .+++++|+. +||.+.++
T Consensus 101 ~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 168 (408)
T 3abb_A 101 VHARQRRMLIPSFGVKRMNA-IRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICE-LLGVPYGD 168 (408)
T ss_dssp HHHHHHHHHGGGGCHHHHHH-HHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred HHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH
Confidence 99999999999999999998 999999999999988853 38999987 5 599999997 68997653
No 59
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.77 E-value=5.3e-18 Score=137.79 Aligned_cols=176 Identities=8% Similarity=0.057 Sum_probs=125.0
Q ss_pred CCchHHHHHHHHHcCCce-----EeeecCCCEEEeeChHHHHHHHhhCCceeeecCccc--cc--cc---cCcccccccC
Q 025228 57 ENPEPFIDVRVKRFGSIF-----TTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS--IS--NL---LGKHSLLLMK 124 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~-----~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~--~~--~~---~g~~~l~~~~ 124 (256)
.+++.++.+++ +||||+ +++. .+.++++||+++++|+.++ ..|+++.... +. .+ .++.++++.+
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD 100 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence 57899999986 789999 7765 6799999999999999765 5677664321 21 22 3346888899
Q ss_pred chhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehh-hh-hhHHHHHHHHHHcCCCChHHHHHHHHHH
Q 025228 125 GSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLME-EA-KKITFELTVKQLMSFDPNEWTESLRKEY 201 (256)
Q Consensus 125 g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~-~~-~~~~~~ii~~~~fG~~~~~~~~~~~~~~ 201 (256)
|+.|+++|++++++|+++++++ +.+.+.+.++++++.+.+. ++|+. +. ..+++++|+. +||.+.++ .+.+.+..
T Consensus 101 g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~ 177 (414)
T 2uuq_A 101 PPVHTEFRKLVSRGFTPRQVET-VEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAH-YLGVPEED-WTQFDGWT 177 (414)
T ss_dssp TTHHHHHHHHHHTTSSHHHHHH-HHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHH-HTTCCGGG-HHHHHHHH
T ss_pred chhHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHH-HhCCCHHH-HHHHHHHH
Confidence 9999999999999999999998 9999999999999988654 89997 55 7999999999 68997763 23333333
Q ss_pred HHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 202 VLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 202 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
..++... .+ .|.. .+..++. +.+.+++.+.|+++++++
T Consensus 178 ~~~~~~~-~~---~p~~--~~~~~~~----~~~~~~~~~~i~~r~~~~ 215 (414)
T 2uuq_A 178 QAIVAAN-AV---DGAT--TGALDAV----GSMMAYFTGLIERRRTEP 215 (414)
T ss_dssp HHHHHHH-HC----------CCHHHH----HHHHHHHHHHHHHHTTSC
T ss_pred HHHHhhc-cc---CCch--hHHHHHH----HHHHHHHHHHHHHHHhCC
Confidence 3333321 01 0211 1112233 334445777887777653
No 60
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.77 E-value=2.4e-17 Score=133.90 Aligned_cols=131 Identities=14% Similarity=0.124 Sum_probs=107.5
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCcc-c------ccccc----Cccc-cccc
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYPG-S------ISNLL----GKHS-LLLM 123 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~------~~~~~----g~~~-l~~~ 123 (256)
.+|+.++.+++ +||||+++++ ++.+.|+++||+++++++.++ .|+++... . ..... ++.+ +++.
T Consensus 22 ~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (413)
T 2z36_A 22 FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGM 98 (413)
T ss_dssp TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGC
T ss_pred cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccccc
Confidence 57889999997 7899999998 788999999999999999763 46554321 1 11222 3457 8889
Q ss_pred CchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc-c--ceeehhhh--hhHHHHHHHHHHcCCCChH
Q 025228 124 KGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT-D--RVLLMEEA--KKITFELTVKQLMSFDPNE 192 (256)
Q Consensus 124 ~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~--~~~d~~~~--~~~~~~ii~~~~fG~~~~~ 192 (256)
+|+.|+++|++++++|+++++++ +.+.+.+.++++++.+. . +++|+.+. ..+++++++.+ ||.+.++
T Consensus 99 ~g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 170 (413)
T 2z36_A 99 DGAEHSAARRPVIGEFTVKRLAA-LRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYTD 170 (413)
T ss_dssp CHHHHHHHHHHHHGGGSHHHHHH-HHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred CchHHHHHHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHHH
Confidence 99999999999999999999998 99999999999999886 3 48999876 57999999995 8987653
No 61
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.77 E-value=2.1e-17 Score=134.53 Aligned_cols=174 Identities=8% Similarity=0.030 Sum_probs=125.5
Q ss_pred CCchHHHHHHHHHcCCceEeeec-CCCEEEeeChHHHHHHHhhCCceeeecCc----ccccc-c----cCcccccccCch
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIF-GEPTVFSADPETNRFILQNEGKLFECSYP----GSISN-L----LGKHSLLLMKGS 126 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~-~~~~v~v~~p~~~~~il~~~~~~~~~~~~----~~~~~-~----~g~~~l~~~~g~ 126 (256)
.+++.++.+++++ |||++++++ |.+.|++++|+++++|+.++ .|+++.. ..... . .++.++++.+|+
T Consensus 29 ~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 105 (417)
T 3tyw_A 29 FAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP 105 (417)
T ss_dssp TSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred cCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCCc
Confidence 6899999999977 999999986 58999999999999999765 5655421 11111 1 234688999999
Q ss_pred hHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHH
Q 025228 127 LHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYV 202 (256)
Q Consensus 127 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~ 202 (256)
.|+++|++++++|++++++. +.+.+.+.++++++.+.. +++|+... ..+++++++.+ ||.+.++. +.+.....
T Consensus 106 ~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~~~~ 182 (417)
T 3tyw_A 106 EHTRYRRMLLPAFTVRRVRA-MRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDL-EFFRDVTR 182 (417)
T ss_dssp HHHHHHHHHGGGGCHHHHHH-THHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT-THHHHHHH
T ss_pred HHHHHHHHHHhhhCHHHHHH-HHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH-HHHHHHHH
Confidence 99999999999999999998 999999999999988753 37999998 47999999997 89977632 22323332
Q ss_pred HHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 203 LVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 203 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+. ... + ...+..++... +.+++.+.|+++++++
T Consensus 183 ~~~----~~~---~--~~~~~~~~~~~----l~~~~~~~i~~r~~~~ 216 (417)
T 3tyw_A 183 ISG----SRN---S--TAEQVSEALGG----LFGLLGGLVAERREEP 216 (417)
T ss_dssp HHH----SSS---S--CTTHHHHHHHH----HHHHHHHHHHHHHSSC
T ss_pred HHh----ccc---C--CHHHHHHHHHH----HHHHHHHHHHHHhhCC
Confidence 222 111 1 11222333334 4444777888777654
No 62
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.77 E-value=3.2e-17 Score=132.73 Aligned_cols=173 Identities=11% Similarity=0.180 Sum_probs=125.2
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCccc--cccccCccc--ccccCc------
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYPGS--ISNLLGKHS--LLLMKG------ 125 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~--~~~~~g~~~--l~~~~g------ 125 (256)
.+++.++.++ ++||||+++++ ++.+.|+++||+++++|+.++ .|+++.... +....++.+ +++.+|
T Consensus 26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 102 (404)
T 2xbk_A 26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAESGR 102 (404)
T ss_dssp TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHHH
T ss_pred cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCCCC
Confidence 5688899999 79999999997 788999999999999999764 365443321 223222345 888999
Q ss_pred hhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-c-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHH
Q 025228 126 SLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-R-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEY 201 (256)
Q Consensus 126 ~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~ 201 (256)
+.|+++|++++++|+++++++ +.+.+.+.++++++.+.. + ++|+..+ ..+++++++. +||.+.++ .+.+.+.+
T Consensus 103 ~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~ 179 (404)
T 2xbk_A 103 RQHAETRRLLTPLFSARRVLE-MQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCE-VIGVPPQR-RAELTTLL 179 (404)
T ss_dssp HHHHHHHHHHGGGGCHHHHHH-HHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-HHHHHHHH
T ss_pred chHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-HHHHHHHH
Confidence 999999999999999999998 999999999999988753 3 8999876 5799999997 68987653 23333333
Q ss_pred HHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 202 VLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 202 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
..++ ... ..+ +..++..+ +.+++.+.|+++++++
T Consensus 180 ~~~~----~~~----~~p--~~~~~~~~----~~~~~~~~i~~r~~~~ 213 (404)
T 2xbk_A 180 AGIA----KLD----DRE--GAVRAQDD----LFGYVAGLVEHKRAEP 213 (404)
T ss_dssp HHHT----BSS----CHH--HHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHHH----hcc----CcH--HHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 3322 211 111 22333333 4445788888877654
No 63
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.76 E-value=1.4e-17 Score=135.18 Aligned_cols=174 Identities=10% Similarity=0.120 Sum_probs=123.3
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc---c---ccc---ccc---CcccccccC
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP---G---SIS---NLL---GKHSLLLMK 124 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~---~---~~~---~~~---g~~~l~~~~ 124 (256)
.+++..+.++ ++||||+++++++.+.|+++||+++++|+.++. ++++.. . .+. .+. +..++++.+
T Consensus 15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (408)
T 1odo_A 15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAY 91 (408)
T ss_dssp TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCC
T ss_pred CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccccccC
Confidence 5788899999 899999999988888999999999999997643 333321 1 011 111 235788899
Q ss_pred chhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc----cceeehhhh-h-hHHHHHHHHHHcCCCChHHHHHHH
Q 025228 125 GSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT----DRVLLMEEA-K-KITFELTVKQLMSFDPNEWTESLR 198 (256)
Q Consensus 125 g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~d~~~~-~-~~~~~ii~~~~fG~~~~~~~~~~~ 198 (256)
|+.|+++|++++++|++.+++. +.+.+.+.++++++.+. ++++|+.+. . .+++++|+. +||.+.++ .+.+.
T Consensus 92 g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~ 168 (408)
T 1odo_A 92 GPNHRKLRRLVAPAFSARRVDA-MRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-RDGFR 168 (408)
T ss_dssp HHHHHHHHHTTGGGGSHHHHHH-HHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-HHHHH
T ss_pred ChHHHHHHHHhhhhcCHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-HHHHH
Confidence 9999999999999999999998 99999999999988875 348999988 6 599999996 68987653 23343
Q ss_pred HHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 199 KEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 199 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+.+..++. .. . ...+..++..+ +.+++.++|+++++++
T Consensus 169 ~~~~~~~~----~~--~---~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 206 (408)
T 1odo_A 169 ALVDGVFD----TT--L---DQAEAQANTAR----LYEVLDQLIAAKRATP 206 (408)
T ss_dssp HHHHHHHC----TT--C---CHHHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHHHHHhc----cc--C---CHHHHHHHHHH----HHHHHHHHHHHHhhCC
Confidence 43333332 10 1 11222333333 3444777777766543
No 64
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.76 E-value=3.5e-17 Score=132.86 Aligned_cols=174 Identities=13% Similarity=0.146 Sum_probs=124.7
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCc-cc------cc---ccc---C-ccccc
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYP-GS------IS---NLL---G-KHSLL 121 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-~~------~~---~~~---g-~~~l~ 121 (256)
.+++.++.++ ++||||+++++ ++.+.|+++||+++++|+.++. ++++.. .. +. .++ + ..+++
T Consensus 17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (411)
T 1gwi_A 17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSML 93 (411)
T ss_dssp SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGG
T ss_pred CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccc
Confidence 5788889999 89999999998 7889999999999999997643 333321 00 00 011 2 35788
Q ss_pred ccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc-cc-eeehhhh-h-hHHHHHHHHHHcCCCChHHHHHH
Q 025228 122 LMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT-DR-VLLMEEA-K-KITFELTVKQLMSFDPNEWTESL 197 (256)
Q Consensus 122 ~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-~~-~~d~~~~-~-~~~~~ii~~~~fG~~~~~~~~~~ 197 (256)
+.+|+.|+++|++++++|+++++++ +.+.+.+.++++++.+. ++ ++|+.+. . .+++++|+. +||.+.++ .+.+
T Consensus 94 ~~~g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~ 170 (411)
T 1gwi_A 94 TVDGAEHRRLRTLVAQALTVRRVEH-MRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR-LPRL 170 (411)
T ss_dssp GCCHHHHHHHHHHHTTTSCHHHHHT-THHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHH
T ss_pred cCCcHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHH-HhCCCHHH-HHHH
Confidence 8999999999999999999999998 99999999999999986 44 8999988 5 599999996 68987653 3344
Q ss_pred HHHHHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 198 RKEYVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.+.+..++.. . . ...+..++..+ +.+++.+.|+++++++
T Consensus 171 ~~~~~~~~~~----~--~---~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 209 (411)
T 1gwi_A 171 KVLFEKFFST----Q--T---PPEEVVATLTE----LASIMTDTVAAKRAAP 209 (411)
T ss_dssp HHHHHHHHCT----T--S---CHHHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhcc----C--C---ChHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 4444433321 0 1 11222333333 4444777777776543
No 65
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.76 E-value=2e-16 Score=128.93 Aligned_cols=132 Identities=13% Similarity=0.058 Sum_probs=106.2
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceeeecCc---cccc--------cccCcccccccC
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFECSYP---GSIS--------NLLGKHSLLLMK 124 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~---~~~~--------~~~g~~~l~~~~ 124 (256)
.+|+.++.+++++ |||+++.. ++.+.++|++++++++++.+. ..|+++.. .... ...+..++++.+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence 5799999999865 99999987 456799999999999999664 45654431 1111 112335788899
Q ss_pred chhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChH
Q 025228 125 GSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNE 192 (256)
Q Consensus 125 g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~ 192 (256)
|+.|+++|++++++|++++++. +.+.+.+.++++++.+.++ ++|+..+ ..+++++++. +||.+.++
T Consensus 116 g~~h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~ 184 (426)
T 3rwl_A 116 RPRHDEQRKAVSPIVAPANLAA-LEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLAT-LFDFPFEE 184 (426)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHH-HHHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG
T ss_pred chHHHHHHHHhhhhhCHHHHHH-HHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHH-HcCCCHHH
Confidence 9999999999999999999998 9999999999999998765 8997777 6899999887 78986653
No 66
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.75 E-value=2.8e-17 Score=132.93 Aligned_cols=177 Identities=12% Similarity=0.079 Sum_probs=124.1
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccc-c------ccccC--cccccccCchh
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGS-I------SNLLG--KHSLLLMKGSL 127 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~------~~~~g--~~~l~~~~g~~ 127 (256)
.+++.++.+++ +||||++ + |.+.++++||+++++||.+ ..|+++.... . ....+ +.++++.+|+.
T Consensus 13 ~~p~~~~~~l~-~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 86 (397)
T 3buj_A 13 RDPYPSYHWLL-RHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPD 86 (397)
T ss_dssp HCCHHHHHHHH-HHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTH
T ss_pred cCchHHHHHHH-hcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCCchh
Confidence 47888998775 8999998 6 5789999999999999975 3565442210 1 01111 35788899999
Q ss_pred HHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Q 025228 128 HKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLV 204 (256)
Q Consensus 128 w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~ 204 (256)
|+++|++++++|++++++. +.+.+.+.++++++.+.++ ++|+..+ ..+++++|+.+ ||.+.++ .+.+......+
T Consensus 87 h~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~ 163 (397)
T 3buj_A 87 HGRLRGVVGPAFSPSALRR-LEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGL-LGLPAAD-WGAVGRWSRDV 163 (397)
T ss_dssp HHHHHHHHGGGSSTTTTGG-GHHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHH-HTCCGGG-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHH-hCCCHHH-HHHHHHHHHHH
Confidence 9999999999999999998 9999999999999988755 8998755 68999999999 8997753 23343444333
Q ss_pred HHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 205 IEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
.... +..++...+.+..++.. .+.+++.+.|+++++++
T Consensus 164 ~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~r~~~~ 201 (397)
T 3buj_A 164 GRTL---DRGASAEDMRRGHAAIA----EFADYVERALARRRREG 201 (397)
T ss_dssp HGGG---CSSCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHC
T ss_pred Hhhc---CCCCChHHHHHHHHHHH----HHHHHHHHHHHHHHcCC
Confidence 3221 11222222233333333 34455777777776543
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.71 E-value=2e-16 Score=127.91 Aligned_cols=173 Identities=11% Similarity=0.072 Sum_probs=116.0
Q ss_pred chHHHHHHHHHcCCceEeeec-CC---CEEEeeChHHHHHHHhhCCceeeecCc-------c---ccccccCcccccccC
Q 025228 59 PEPFIDVRVKRFGSIFTTHIF-GE---PTVFSADPETNRFILQNEGKLFECSYP-------G---SISNLLGKHSLLLMK 124 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~-~~---~~v~v~~p~~~~~il~~~~~~~~~~~~-------~---~~~~~~g~~~l~~~~ 124 (256)
++.++.+++++ |||+++.++ |. +.|+++||+++++++.++. .|+++.. . ......++.++++.+
T Consensus 15 ~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 92 (398)
T 1lfk_A 15 GLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYD 92 (398)
T ss_dssp TTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGGCC
T ss_pred CCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccccC
Confidence 34455668765 999999875 55 8999999999999994333 4655432 1 111222345888899
Q ss_pred chhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhc--cceeehhhh-hh-HHHHHHHHHHcCCCChHHHHHHHHH
Q 025228 125 GSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT--DRVLLMEEA-KK-ITFELTVKQLMSFDPNEWTESLRKE 200 (256)
Q Consensus 125 g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~-~~-~~~~ii~~~~fG~~~~~~~~~~~~~ 200 (256)
|+.|+++|++++++|++++++. +.+.+.+.++++++.+. ++++|+.+. .. +++++++. +||.+.++ .+.+.+.
T Consensus 93 g~~~~~~R~~~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~ 169 (398)
T 1lfk_A 93 PPEHTRLRRKLTPGFTLRKMQR-MAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCE-LVGVPRDD-RDMFMKL 169 (398)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHH-HHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-HHHHHHH
T ss_pred CHHHHHHHHHHHhhhCHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHH
Confidence 9999999999999999999998 99999999999998884 348999998 65 99999998 58997753 2333333
Q ss_pred HHHHHHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 201 YVLVIEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 201 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+.. ++.. +. ...+..++..+ +.+++.+.|+++++++
T Consensus 170 ~~~----~~~~----~~-~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 205 (398)
T 1lfk_A 170 CHG----HLDA----SL-SQKRRAALGDK----FSRYLLAMIARERKEP 205 (398)
T ss_dssp HHH----TTCT----TS-CHHHHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred HHH----HHhc----cc-chHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 322 2221 11 12223333333 4444778888777654
No 68
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.71 E-value=2.2e-16 Score=126.33 Aligned_cols=168 Identities=11% Similarity=0.083 Sum_probs=120.0
Q ss_pred chHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc-c--cc-----c-cccC---cccccccCch
Q 025228 59 PEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP-G--SI-----S-NLLG---KHSLLLMKGS 126 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-~--~~-----~-~~~g---~~~l~~~~g~ 126 (256)
|+..+.+++ +||||+++. | .+++++|++++++|.+. ..|+++.. . .+ . ...| ..++++.+|+
T Consensus 1 p~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 74 (367)
T 3b4x_A 1 MYDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP 74 (367)
T ss_dssp CHHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred CCHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCch
Confidence 466788885 799999987 3 89999999999999765 46765532 1 22 2 3455 3689999999
Q ss_pred hHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccceeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Q 025228 127 LHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLV 204 (256)
Q Consensus 127 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~ 204 (256)
.|+++|++++++|++++++. +.+.+.++++++.+. +.+|+.++ ..+++++|+. +||.+ + +.+.+......+
T Consensus 75 ~h~~~R~~~~~~fs~~~l~~---~~i~~~~~~l~~~l~-g~~d~~~~~~~~~~~~vi~~-~~G~~-~-~~~~~~~~~~~~ 147 (367)
T 3b4x_A 75 LHDELRNLTADAFNPSNLPV---DFVREVTVKLLSELD-EEFDVIESFAIPLPILVISK-MLGIN-P-DVKKVKDWSDLV 147 (367)
T ss_dssp HHHHHHHTTGGGGSGGGSCH---HHHHHHHHHHHHTCC-SEEEHHHHTTTHHHHHHHHH-HHTCC-C-CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCHhhhcc---hHHHHHHHHHHHhcc-CCcchHHHHHHhhHHHHHHH-HcCCC-C-cHHHHHHHHHHH
Confidence 99999999999999998875 888899999999887 56999965 7999999999 78998 4 334444444444
Q ss_pred HHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 205 IEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
+..+.. .|.. +.+ .+ ..+.+.+++.+.|+++++++
T Consensus 148 ~~~~~~----~p~~-~~~-~~----~~~~~~~~~~~~i~~r~~~~ 182 (367)
T 3b4x_A 148 ALRLGR----ADEI-FSI-GR----KYLELISFSKKELDSRKGKE 182 (367)
T ss_dssp HTTTTS----TTGG-GCC-CH----HHHHHHHHHHHHHHHHTTTC
T ss_pred HhccCC----Chhh-HHH-HH----HHHHHHHHHHHHHHHHhcCC
Confidence 332111 2211 111 12 33344555888888887654
No 69
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.71 E-value=3.9e-16 Score=126.20 Aligned_cols=173 Identities=13% Similarity=0.096 Sum_probs=124.2
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCccccccc--cCcccccccCchhHHHHHHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNL--LGKHSLLLMKGSLHKRMHSL 134 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~--~g~~~l~~~~g~~w~~~R~~ 134 (256)
.+++.++.+++++ |||+++..++ +.++++||+++++++.+ .+.|+++........ .++.++++.+|+.|+++|++
T Consensus 24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~~ 100 (396)
T 3oft_A 24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGD-AERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRTP 100 (396)
T ss_dssp TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC-TTTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHHH
T ss_pred cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC-cccccCCcccCCCccccccccCccccCCcHHHHHHHH
Confidence 6899999999987 9999998764 58999999999999965 457766553211111 12347788999999999999
Q ss_pred HHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhccc
Q 025228 135 TMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTV 211 (256)
Q Consensus 135 ~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 211 (256)
++++|++++++. +.+.+.+.++++++.+.++ .+|+..+ ..++.++++. +||.+.+ +...+.+.+..++..
T Consensus 101 ~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~-~~G~~~~-~~~~~~~~~~~~~~~---- 173 (396)
T 3oft_A 101 VMKGLASRFVVA-LEPKVQAVARKLMESLRPRGSCDFVSDFAEILPLNIFLT-LIDVPLE-DRPRLRQLGVQLTRP---- 173 (396)
T ss_dssp HHHHTCHHHHHH-HHHHHHHHHHHHHHHHGGGSEEEHHHHTTTTHHHHHHHH-HTTCCGG-GHHHHHHHHHHHHSC----
T ss_pred hhhhhCHHHHHH-HHHHHHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHHHH-HcCCCHH-HHHHHHHHHHHHhCC----
Confidence 999999999998 9999999999999998755 8898766 6678888776 5798665 334444444443321
Q ss_pred ccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 212 PLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 212 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
....+..++..+ +.+++.+.|+++++++
T Consensus 174 ------~~~~~~~~~~~~----~~~~~~~~i~~r~~~~ 201 (396)
T 3oft_A 174 ------DGSMTVEQLKQA----ADDYLWPFIEKRMAQP 201 (396)
T ss_dssp ------CSSCCHHHHHHH----HHHHHHHHHHHHHHSC
T ss_pred ------CCHHHHHHHHHH----HHHHHHHHHHHHHhCC
Confidence 011222333344 3444777777776553
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.70 E-value=9.6e-16 Score=123.74 Aligned_cols=178 Identities=10% Similarity=0.056 Sum_probs=124.5
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc-ccccc-cCcccccccCchhHHHHHHH
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG-SISNL-LGKHSLLLMKGSLHKRMHSL 134 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~~~~~-~g~~~l~~~~g~~w~~~R~~ 134 (256)
.+|+.++.++++ +|||+++.. ..+++++++.+++++.+. .|+.+... ..... .++.++++.||+.|+++|++
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~---g~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~ 93 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLED---GTYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQ 93 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTT---SCEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecC---CeEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHHHHHHH
Confidence 478999998874 589998753 379999999999999643 45433211 11121 22357888999999999999
Q ss_pred HHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh-hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccc
Q 025228 135 TMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA-KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVP 212 (256)
Q Consensus 135 ~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~-~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (256)
++++|++++++. +.+.+.+.++++++.+.++ ++|+... ..+++++++..+||.+.++ ...+.+.+...+.. .
T Consensus 94 ~~~~fs~~~~~~-~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-~~~~~~~~~~~~~~----~ 167 (394)
T 2wiy_A 94 TNKWFTPKLVDG-WVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDD-ADAVMEAMFEAMLM----Q 167 (394)
T ss_dssp HHTTCSHHHHHH-HTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCC-HHHHHHHHHHHHGG----G
T ss_pred HHhccCHHHHHH-HHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhH-HHHHHHHHHHHHHh----c
Confidence 999999999998 9999999999999998655 8999999 9999999999999987653 33444443322211 1
Q ss_pred cCCCCh-hhHHHHhhhHHHHHhHHHHHHHHHHhhhcccc
Q 025228 213 LPIFST-TYRRAIQVPNLIYIQTFFFIYFFLKKKRKEKN 250 (256)
Q Consensus 213 ~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 250 (256)
...|.. .+.+..++ ...+.+++.+.|++++++++
T Consensus 168 ~~~p~~~~~~~~~~~----~~~l~~~~~~~i~~rr~~~~ 202 (394)
T 2wiy_A 168 SAEPADGDVDRAAVA----FGYLSARVAEMLEDKRVNPG 202 (394)
T ss_dssp SSSCCTTHHHHHHHH----HHHHHHHHHHHHHHHHHSCC
T ss_pred cCCccchHHHHHHHH----HHHHHHHHHHHHHHhhcCCC
Confidence 112221 12222223 33444558888888776654
No 71
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.69 E-value=1.5e-16 Score=129.31 Aligned_cols=177 Identities=9% Similarity=0.017 Sum_probs=120.8
Q ss_pred CCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc---------ccccccCcccccccCchh
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG---------SISNLLGKHSLLLMKGSL 127 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~---------~~~~~~g~~~l~~~~g~~ 127 (256)
.+|+.+ +.++ +|||++++..++.. ++|++++++++||.+.. ..+..... ...... +.++++.+|+.
T Consensus 33 ~~P~~~-~~lr-~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~dg~~ 107 (416)
T 3p3o_A 33 NFSWDS-PEVA-EAREKSWIARTPLA-LLVLRYAEADQLARDKR-LISGFRGLVDMVGTPEGPVRDFM-VDFLQSLDGAD 107 (416)
T ss_dssp TCCTTS-HHHH-HHHHHCSEEECSSS-EEECSHHHHHHHHHCTT-EECSHHHHHHHHTCCSSHHHHHH-HHSGGGCCHHH
T ss_pred cCCchH-HHHH-HhCCccccccCCCc-eEEeCHHHHHHHHcCcc-cccCCccccccccccccchhhhh-cCccccCCchH
Confidence 678888 6665 89999999886656 99999999999997653 22211110 011112 25788999999
Q ss_pred HHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Q 025228 128 HKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLV 204 (256)
Q Consensus 128 w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~ 204 (256)
|+++|++++++|+++++++ +.+.+.+.++++++.+ .+ .+|+..+ ..+++++||.+ ||.+.++ .+.+.+....+
T Consensus 108 h~~~Rr~~~~~fs~~~l~~-~~~~i~~~~~~ll~~l-~~g~~d~~~~~~~~~~~~vi~~l-~G~~~~~-~~~~~~~~~~~ 183 (416)
T 3p3o_A 108 HRRLRGLATHPFTPRRITA-VQPFVRSTVEQLIDKL-PQGDFDFVQHFPHPLPALVMCQL-LGFPLED-YDTVGRLSIET 183 (416)
T ss_dssp HHHHHHTTCGGGSHHHHHH-HHHHHHHHHHHHHHTC-CSSSEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCHHHHHH-HHHHHHHHHHHHHHhh-ccCCccHHHHHHHHHHHHHHHHH-hCCCHHH-HHHHHHHHHHH
Confidence 9999999999999999998 9999999999999999 44 8997666 67999999995 7987653 23333333322
Q ss_pred HHhhcccccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccc
Q 025228 205 IEGFFTVPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEK 249 (256)
Q Consensus 205 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 249 (256)
...+ ....+.....+..++. +.+.+++.+.|+++++++
T Consensus 184 ~~~~---~~~~~~~~~~~~~~~~----~~l~~~~~~~i~~rr~~~ 221 (416)
T 3p3o_A 184 NLGL---ALSNDQDILVKVEQGL----GRMFDYLVAAIEKRKVEP 221 (416)
T ss_dssp CGGG---TTCSCHHHHHHHHHHH----HHHHHHHHHHHHHHHHSC
T ss_pred Hhhc---ccccchhhHHHHHHHH----HHHHHHHHHHHHHHHhCC
Confidence 2211 1111111222233333 444555888888887654
No 72
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.63 E-value=2.9e-14 Score=115.70 Aligned_cols=141 Identities=12% Similarity=0.085 Sum_probs=107.4
Q ss_pred CCCccc---hHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcccc-----
Q 025228 40 GLPFLG---ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSI----- 111 (256)
Q Consensus 40 ~~p~~g---~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~----- 111 (256)
++|.+| ....+. .+|+.++++++ ++|||+++ .+.+.++|++++++++||.+ ...|+.......
T Consensus 19 ~~P~~~~dp~~~~~~-----~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d-~~~fs~~~~~~~~~~~~ 89 (412)
T 4dnj_A 19 GVPHLGIDPFALDYF-----ADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLND-PLTFCSSRGVGLSDFKK 89 (412)
T ss_dssp TSCEECCCTTSHHHH-----HSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTC-TTTEESTTCSSSSCTTT
T ss_pred CCCccCCCCCCHHHH-----hCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcC-CccccCCCccccccccc
Confidence 567666 233444 68999999997 67999854 46679999999999999954 455654332111
Q ss_pred -ccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc--ceeehhhh--hhHHHHHHHHHHc
Q 025228 112 -SNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD--RVLLMEEA--KKITFELTVKQLM 186 (256)
Q Consensus 112 -~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~--~~~~~~ii~~~~f 186 (256)
....+...++..||++|+++|++++++|+++++++ +.+.+.+.++++++++.. +.+|+..+ ..+++++++.++
T Consensus 90 ~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~-~~~~i~~~~~~l~~~~~~~~~~~D~v~~~~~~~~~~~i~~l~- 167 (412)
T 4dnj_A 90 EKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKR-LRDGFAAAADAKIDELLARGGNIDAIADLAEAYPLSVFPDAM- 167 (412)
T ss_dssp SCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHHHHHHHHHHTTSEEETCCCCCCHHHHHHHHHHH-
T ss_pred cccccCCCccccCChHHHHHHHhhcccccCHHHHHH-hhHHHHHHHHHHHHhhhccCCCceeHHHHHhhhhHhHHHHHc-
Confidence 12233456788999999999999999999999998 999999999999988743 38887666 889999998876
Q ss_pred CCCCh
Q 025228 187 SFDPN 191 (256)
Q Consensus 187 G~~~~ 191 (256)
|....
T Consensus 168 g~~~~ 172 (412)
T 4dnj_A 168 GLKQE 172 (412)
T ss_dssp TCCST
T ss_pred CCchh
Confidence 65443
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.63 E-value=8.7e-15 Score=117.11 Aligned_cols=125 Identities=12% Similarity=0.111 Sum_probs=101.4
Q ss_pred chHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCc--c-ccc----cc--cC--c-ccccccCch
Q 025228 59 PEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYP--G-SIS----NL--LG--K-HSLLLMKGS 126 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~-~~~----~~--~g--~-~~l~~~~g~ 126 (256)
|+.++.+++ +||||+++ | +.+++++|+++++++.+ ...|+++.. . .+. .. ++ . .++++.+|+
T Consensus 1 p~~~~~~lr-~~Gpv~~~---g-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 74 (368)
T 1io7_A 1 MYDWFSEMR-KKDPVYYD---G-NIWQVFSYRYTKEVLNN-FSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP 74 (368)
T ss_dssp CHHHHHHHH-HHCSEEEC---S-SCEEECSHHHHHHHHHC-TTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred CCHHHHHHH-hcCCeEeE---C-CEEEEecHHHHHHHHcC-cccccccccccccccccccccccccccccccccccCCCh
Confidence 466788885 89999987 3 58999999999999976 446766543 1 011 11 22 2 578889999
Q ss_pred hHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChH
Q 025228 127 LHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNE 192 (256)
Q Consensus 127 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~ 192 (256)
.|+++|++++++|++++++. +.+.+.+.++++++.+ .+ ++|+.++ ..+++++|+.+ ||.+.++
T Consensus 75 ~h~~~R~~~~~~f~~~~~~~-~~~~i~~~~~~l~~~l-~~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 140 (368)
T 1io7_A 75 LHDELRSMSADIFSPQKLQT-LETFIRETTRSLLDSI-DPREDDIVKKLAVPLPIIVISKI-LGLPIED 140 (368)
T ss_dssp HHHHHHGGGTTTTCHHHHHH-HHHHHHHHHHHHHHTC-CTTSEEHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred HHHHHHHHHHhhcCHHHHHH-HHHHHHHHHHHHHHHh-hcCCccHHHHHHHHHHHHHHHHH-hCCCHHH
Confidence 99999999999999999998 9999999999999998 44 7999985 68999999999 9997753
No 74
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.63 E-value=2.8e-14 Score=115.81 Aligned_cols=182 Identities=7% Similarity=-0.087 Sum_probs=121.3
Q ss_pred CCchHHHHHHHHHcC-CceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcccc--ccccCcccccccCchhHHHHHH
Q 025228 57 ENPEPFIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSI--SNLLGKHSLLLMKGSLHKRMHS 133 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~--~~~~g~~~l~~~~g~~w~~~R~ 133 (256)
.+++..+.+++++.+ +++.... +...++|++++++++|+.+ ...|++...... ....+...++..||++|+++|+
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~-~gg~W~vtr~~dv~~vl~d-~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rr 114 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPF-TGGHWIATNGDTVKEVYSD-PTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRK 114 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESS-TTSEEEECSHHHHHHHHTC-TTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecCC-CCCEEEECCHHHHHHHHcC-chhccCCCcccccccccccccCcccCCcHHHHHHHH
Confidence 468888888875543 3443322 3368899999999999954 556765432111 1112223566789999999999
Q ss_pred HHHhhcChhhHHhhhHHHHHHHHHHHHHhhccc-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc
Q 025228 134 LTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFT 210 (256)
Q Consensus 134 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 210 (256)
+++++|+++++++ +.+.+.+.++++++++..+ .+|+... ..+++.+++.+ +|.... +...+.+....+ ..
T Consensus 115 ll~~~Fs~~~l~~-~~~~i~~~~~~lld~l~~~g~~D~v~~~a~~l~~~vi~~l-lg~~~~-d~~~~~~~~~~~----~~ 187 (417)
T 4dxy_A 115 ALDKGLNLAKIRK-VEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFMAL-ADLPLE-DIPVLSEYARQM----TR 187 (417)
T ss_dssp HHHHHHCHHHHHT-THHHHHHHHHHHHHHHHTTSEEEHHHHTTTTHHHHHHHHH-TTCCGG-GHHHHHHHHHHH----HS
T ss_pred HhhhhcCHHHHHH-HHHHHHHHHHHHHHHhhhcCCeeeHHHHHhhhHHHHHHHH-cCCCHH-HHHHHHhhhhhh----cc
Confidence 9999999999998 9999999999999998766 8998777 77888888765 598665 333443333332 22
Q ss_pred cccCCCChhhHHHHhhhHHHHHhHHHHHHHHHHhhhccccc
Q 025228 211 VPLPIFSTTYRRAIQVPNLIYIQTFFFIYFFLKKKRKEKNT 251 (256)
Q Consensus 211 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 251 (256)
.....|... ..........+..++.+++++|++++.+
T Consensus 188 ~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~rr~~~~d 224 (417)
T 4dxy_A 188 PEGNTPEEM----ATDLEAGNNGFYAYVDPIIRARVGGDGD 224 (417)
T ss_dssp CCCSSHHHH----HHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccccChHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 222222111 2222333444555688889888876543
No 75
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.61 E-value=8.4e-15 Score=118.33 Aligned_cols=136 Identities=7% Similarity=0.050 Sum_probs=105.1
Q ss_pred CCchHHHHHHHHHcCCceEeee-cCCCEEEeeChHHHHHHHhhCCceee-e-cCcc---cc-----ccccCcccccccCc
Q 025228 57 ENPEPFIDVRVKRFGSIFTTHI-FGEPTVFSADPETNRFILQNEGKLFE-C-SYPG---SI-----SNLLGKHSLLLMKG 125 (256)
Q Consensus 57 ~~~~~~~~~~~~~~g~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~-~-~~~~---~~-----~~~~g~~~l~~~~g 125 (256)
.+++.++.++ ++||||+++++ ++.+.|+++||+++++++.++ .|+ + +... .. ....| .++++.
T Consensus 16 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~-- 89 (396)
T 1n40_A 16 DRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVV-NNMGNI-- 89 (396)
T ss_dssp SSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGG-GHHHHH--
T ss_pred cCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhh-hhhhhH--
Confidence 5789999999 89999999997 788999999999999999764 365 4 3221 11 11122 456655
Q ss_pred hhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhcc-c-eeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHH
Q 025228 126 SLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD-R-VLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEY 201 (256)
Q Consensus 126 ~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~ 201 (256)
.|+++|++++++|+++ ++. +.+.+.+.++++++.+.. + ++|+..+ ..+++++|+. +||.+.++ .+++.+.+
T Consensus 90 -~h~~~R~~~~~~fs~~-~~~-~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~ 164 (396)
T 1n40_A 90 -ADAGLRKAVMKAITPK-APG-LEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCK-VLGIPQED-GPKLFRSL 164 (396)
T ss_dssp -HHTTCHHHHHHHTSSC-STT-HHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHH-HHTCCGGG-HHHHHHTH
T ss_pred -HHHHHHHHHHHhhChH-HHH-hHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHH-HhCCChhh-HHHHHHHH
Confidence 9999999999999999 887 999999999999988754 4 8999976 4899999999 78997753 23343433
Q ss_pred HH
Q 025228 202 VL 203 (256)
Q Consensus 202 ~~ 203 (256)
..
T Consensus 165 ~~ 166 (396)
T 1n40_A 165 SI 166 (396)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 76
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.61 E-value=9.8e-15 Score=115.70 Aligned_cols=124 Identities=12% Similarity=0.125 Sum_probs=97.5
Q ss_pred HHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc-ccccccCcccccccCchhHHHHHHHHHhhcChhhHHh
Q 025228 68 KRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG-SISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRD 146 (256)
Q Consensus 68 ~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~ 146 (256)
++||||+++ | .++++||+++++|+.++ ..|+++... .... ++.++++.+|+.|+++|++++++|+++++++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~--~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~ 73 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA--GGISFITMDNPEHKEFRDISAPYFLPSKIND 73 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHHHSHHHHGG
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc--cccccccCCchHHHHHHHHhhhhcCHHHHHH
Confidence 489999986 3 99999999999999765 467665421 1122 3468888999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHhhccceeehhhh--hhHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Q 025228 147 HLLVDIDRLVRLHMDSWTDRVLLMEEA--KKITFELTVKQLMSFDPNEWTESLRKEYVLV 204 (256)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~ 204 (256)
+.+.+.+.++++++.+. ++|+.++ ..+++++++.+ ||.+.++ .+.+.+....+
T Consensus 74 -~~~~i~~~~~~l~~~l~--~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~ 128 (343)
T 2rfb_A 74 -YKDFIEETSNDLIKNID--NKDIISEYAVRLPVNIISKI-LGIPDSD-MPLFKLWSDYI 128 (343)
T ss_dssp -GHHHHHHHHHHHHTTCT--TSCHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhcc--ccCHHHHHhhhhhHHHHHHH-cCCCHHH-HHHHHHHHHHH
Confidence 99999999999999887 7899874 79999999999 9987753 33444444333
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.94 E-value=2.2e-11 Score=97.20 Aligned_cols=135 Identities=9% Similarity=0.012 Sum_probs=88.7
Q ss_pred CCCC-CCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCCCEEEeeChHHHHHHHhhCCceeeecCcc---
Q 025228 34 LPPG-SLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPG--- 109 (256)
Q Consensus 34 ~ppg-p~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~--- 109 (256)
+||| ++++|++|+..++.......+++.++.+++++ ||++.. .+.+++++++++++|+.+ ..|+++...
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccccc
Confidence 5677 44689999877654333335899999999865 998764 468999999999999976 356544221
Q ss_pred c-------cccccCcccccccCchhHHHHHHHHHhhcChhhHHhhhHHHHHHHHHHHHHhhccceeehhhh--hhHHHHH
Q 025228 110 S-------ISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA--KKITFEL 180 (256)
Q Consensus 110 ~-------~~~~~g~~~l~~~~g~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~i 180 (256)
. ... ++ .++++.||++| +++|+ . .+.+.+.++++++.+. +.+|+..+ ..+++++
T Consensus 108 ~~~~~~~~~~~-~~-~~l~~~dg~~H-------~~~Ft--~-----~~~i~~~~~~ll~~~~-g~~Dl~~~~a~~l~~~v 170 (381)
T 2yjn_B 108 WMRAAGAPPAE-WA-QPFRDVHAASW-------EGEVP--D-----VGELAESFAGLLPGAG-ARLDLVGDFAWQVPVQG 170 (381)
T ss_dssp HHHHHTCCHHH-HT-HHHHHHHHCCC-------CSCCC--C-----CSCHHHHTSTTSCC-------CCCCCCTHHHHHH
T ss_pred cccccccccch-hh-hhhhhCCchhh-------hhccC--C-----hHHHHHHHHHHHHhcc-CcchHHHHHHHHHHHHH
Confidence 1 111 23 46788899999 78888 2 3456667777777776 57999966 6999999
Q ss_pred HHHHHcCCCChHH
Q 025228 181 TVKQLMSFDPNEW 193 (256)
Q Consensus 181 i~~~~fG~~~~~~ 193 (256)
||++ ||.+.++.
T Consensus 171 i~~l-~G~~~~~~ 182 (381)
T 2yjn_B 171 MTAV-LGAAGVLR 182 (381)
T ss_dssp HHTC------CCH
T ss_pred HHHH-cCCCHHHH
Confidence 9995 89876543
No 78
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.13 E-value=15 Score=18.83 Aligned_cols=10 Identities=10% Similarity=0.278 Sum_probs=4.1
Q ss_pred HHHHHHHHHH
Q 025228 14 ISISTVIFFI 23 (256)
Q Consensus 14 ~~~~l~~~~~ 23 (256)
+++.+.+.+|
T Consensus 25 vi~~l~~~~~ 34 (44)
T 2jwa_A 25 VVLGVVFGIL 34 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 3334444444
No 79
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=56.64 E-value=20 Score=22.34 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=36.9
Q ss_pred CCCCCCCCCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec------CCCEEEeeChHHHHHHHh
Q 025228 34 LPPGSLGLPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF------GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 34 ~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~------~~~~v~v~~p~~~~~il~ 97 (256)
.||.|...-++||+.. .-...-+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~-------~~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPY-------KITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCT-------TCCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 3455544446787642 22344566777899998887762 234677778888888875
No 80
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=54.58 E-value=8.7 Score=24.22 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=35.7
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC-------CCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG-------EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~-------~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++||+.. .-..+-+.++..+||+|..+.+.. .-+|-..+++.++..+.. ++..+
T Consensus 9 fV~nLp~-------~~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~l~~~~~ 70 (115)
T 4f25_A 9 FIKNLDK-------SIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 70 (115)
T ss_dssp EEESCCT-------TCCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHHHTTCEE
T ss_pred EECCCCC-------CCCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHHcCCCEE
Confidence 6777642 223455677888999987776531 236778899999988854 44444
No 81
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.08 E-value=28 Score=21.39 Aligned_cols=41 Identities=5% Similarity=-0.016 Sum_probs=31.0
Q ss_pred HHHHHHHHcC-CceEeeecCCCEEEeeChHHHHHHHhh-CCcee
Q 025228 62 FIDVRVKRFG-SIFTTHIFGEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 62 ~~~~~~~~~g-~v~~~~~~~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
-++++..+|| +|..+ .+|.-+|...+.+.+...+.. ++..+
T Consensus 29 ~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l 71 (96)
T 2diu_A 29 RLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDV 71 (96)
T ss_dssp HHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCcc
Confidence 3567888995 98887 568889999999999888743 44444
No 82
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=47.53 E-value=25 Score=21.60 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=29.4
Q ss_pred chHHHHHHHHHcCCceEeeec--------CCCEEEeeChHHHHHHHhhCC
Q 025228 59 PEPFIDVRVKRFGSIFTTHIF--------GEPTVFSADPETNRFILQNEG 100 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~--------~~~~v~v~~p~~~~~il~~~~ 100 (256)
..+-+.++..+||+|..+.+. |.-.|...+++.+..++..++
T Consensus 24 te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~ 73 (103)
T 1s79_A 24 TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG 73 (103)
T ss_dssp CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSC
T ss_pred CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCC
Confidence 344566777899998877764 223567779999999886433
No 83
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=44.01 E-value=26 Score=21.88 Aligned_cols=54 Identities=11% Similarity=0.161 Sum_probs=35.7
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec-----C----CCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF-----G----EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-----~----~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-..+.+.++..+||+|..+.+. + .-.|...+++.++..+.. ++..+
T Consensus 10 fV~nL~~-------~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~lng~~~ 73 (110)
T 3s8s_A 10 TFARLND-------NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSV 73 (110)
T ss_dssp EEESCCT-------TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred EEECCCC-------CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHHhCCCEE
Confidence 6777642 23445667788899998887663 1 126777899999988753 34334
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=43.93 E-value=36 Score=18.92 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=28.3
Q ss_pred hHHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHhhCC
Q 025228 60 EPFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQNEG 100 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~~~~ 100 (256)
.+-+.++..+||+|..+.+. |.-.|...+++.++.++..++
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 34456677789998777653 123567779999999886543
No 85
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=42.46 E-value=17 Score=21.62 Aligned_cols=46 Identities=15% Similarity=0.196 Sum_probs=32.0
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec----CCCEEEeeChHHHHHH
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF----GEPTVFSADPETNRFI 95 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~----~~~~v~v~~p~~~~~i 95 (256)
++|++.. .-..+-+.++..+||+|..+.+. |--+|...+++.++.+
T Consensus 15 ~V~~Lp~-------~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 15 FVGRCTE-------DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp EEESCCT-------TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 6777642 23345567788899999888775 2346777889888864
No 86
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=42.40 E-value=25 Score=22.10 Aligned_cols=54 Identities=7% Similarity=-0.083 Sum_probs=35.8
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcC-CceEeeec-----CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFG-SIFTTHIF-----GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~v~~~~~~-----~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++||+.. .-..+-+.++..+|| .|..+.+. |.-+|...+++.++..+.. ++..+
T Consensus 32 ~VgnLp~-------~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~lng~~l 92 (111)
T 2jvr_A 32 TMKNLPE-------GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEF 92 (111)
T ss_dssp EEECSSC-------CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHHTTTEEE
T ss_pred EEECCCC-------CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHHcCCCEE
Confidence 6777642 234455677888999 77776663 3457777899999888853 34344
No 87
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=40.95 E-value=31 Score=16.95 Aligned_cols=7 Identities=14% Similarity=0.320 Sum_probs=2.9
Q ss_pred HHHHHHH
Q 025228 17 STVIFFI 23 (256)
Q Consensus 17 ~l~~~~~ 23 (256)
.+.++++
T Consensus 29 ~l~~~~~ 35 (38)
T 2k1k_A 29 GILVFRS 35 (38)
T ss_dssp HHHHHHH
T ss_pred HHHHHHe
Confidence 3344444
No 88
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.39 E-value=63 Score=19.57 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=29.3
Q ss_pred HHHHHHHcCCceEeeec-CCCEEEeeChHHHHHHHhhCCceee
Q 025228 63 IDVRVKRFGSIFTTHIF-GEPTVFSADPETNRFILQNEGKLFE 104 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~-~~~~v~v~~p~~~~~il~~~~~~~~ 104 (256)
+.+....||.|..+++. ++-+|...+.+.+..++..++..+.
T Consensus 32 L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG~~v~ 74 (91)
T 2dnr_A 32 LLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKELL 74 (91)
T ss_dssp HHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTTCEET
T ss_pred HHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCCeEeC
Confidence 33444589999888874 4456666799998888876665553
No 89
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=38.02 E-value=75 Score=20.32 Aligned_cols=50 Identities=10% Similarity=-0.029 Sum_probs=33.5
Q ss_pred CccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhh
Q 025228 42 PFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQN 98 (256)
Q Consensus 42 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~ 98 (256)
-++|++.. .-...-+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 49 l~V~nLp~-------~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 49 LGVFGLSL-------YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp BCEETCTT-------SCCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 36777642 223445677788999988877631 135667799999888863
No 90
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=35.95 E-value=40 Score=20.80 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=26.6
Q ss_pred HHHHHHHcCCceEeeecCC-CEEEeeChHHHHHHHh
Q 025228 63 IDVRVKRFGSIFTTHIFGE-PTVFSADPETNRFILQ 97 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~~~-~~v~v~~p~~~~~il~ 97 (256)
+.++...||.+.--|+-.. -.+++.+|+.+++++.
T Consensus 32 I~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 32 LYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp HHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred HHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 4567778997665566554 4788899999999996
No 91
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.74 E-value=50 Score=20.54 Aligned_cols=48 Identities=8% Similarity=0.037 Sum_probs=33.7
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC---CCEEEeeChHHHHHHHh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG---EPTVFSADPETNRFILQ 97 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~---~~~v~v~~p~~~~~il~ 97 (256)
++||+.. .-..+-+.++..+||.|..+.+.. .-+|-..+++.+...+.
T Consensus 20 fV~nLp~-------~vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 20 HIRKLPI-------DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp EECSCCT-------TSCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 6788753 223445677888999998887642 24677778888888875
No 92
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=32.42 E-value=70 Score=18.10 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=26.8
Q ss_pred HHHHHHHHHcCCceEeeec-------CCCEEEeeChHHHHHHHh
Q 025228 61 PFIDVRVKRFGSIFTTHIF-------GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 61 ~~~~~~~~~~g~v~~~~~~-------~~~~v~v~~p~~~~~il~ 97 (256)
.-+.++..+||+|..+.+. |.-.|-..+++.+...+.
T Consensus 22 ~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 22 NVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp HHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 4566777899998887764 223566678888888875
No 93
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=32.25 E-value=41 Score=18.70 Aligned_cols=42 Identities=7% Similarity=-0.073 Sum_probs=27.6
Q ss_pred hHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhhCCc
Q 025228 60 EPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQNEGK 101 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~~~~ 101 (256)
.+-+.++..+||+|..+.+.. .-.|...+++.++.++..++.
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~ 63 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFH 63 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCC
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCC
Confidence 344566777899987776532 124666789999888754333
No 94
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.22 E-value=96 Score=18.90 Aligned_cols=39 Identities=13% Similarity=0.224 Sum_probs=29.5
Q ss_pred hHHHHHHHHHcCCceEeeecCC----CEEEeeChHHHHHHHhh
Q 025228 60 EPFIDVRVKRFGSIFTTHIFGE----PTVFSADPETNRFILQN 98 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~~~----~~v~v~~p~~~~~il~~ 98 (256)
..-+.++..+||+|..+.+.+. -+|...+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 4567778889999988877432 36777799999888865
No 95
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=30.05 E-value=87 Score=18.38 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=29.1
Q ss_pred HHHHHHHcCCceEeeec------CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 63 IDVRVKRFGSIFTTHIF------GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~------~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
+.++..+||+|..+.+. |.-+|-..+++.+...+.. ++..+
T Consensus 29 l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 76 (97)
T 1nu4_A 29 LHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPF 76 (97)
T ss_dssp HHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHHhCCCEE
Confidence 34788899998887664 4456777899989888853 44444
No 96
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=29.94 E-value=77 Score=19.66 Aligned_cols=55 Identities=9% Similarity=0.176 Sum_probs=36.5
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec--CCCEEEeeChHHHHHHHhh-CCceee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF--GEPTVFSADPETNRFILQN-EGKLFE 104 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~--~~~~v~v~~p~~~~~il~~-~~~~~~ 104 (256)
++||+.. ....+-+.++..+||+|..+.+. +.-+|...+++.++..+.. ++..+.
T Consensus 20 ~V~nLp~-------~~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 77 (115)
T 3beg_B 20 VVSGLPP-------SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 77 (115)
T ss_dssp EEEECCS-------SCCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCC
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 5677642 22344566778899999888774 3456777799988888853 444443
No 97
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.52 E-value=91 Score=18.42 Aligned_cols=35 Identities=9% Similarity=0.058 Sum_probs=26.0
Q ss_pred HHHHHHHcCCceEeeec------CCCEEEeeChHHHHHHHh
Q 025228 63 IDVRVKRFGSIFTTHIF------GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~------~~~~v~v~~p~~~~~il~ 97 (256)
+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 30 l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 30 LQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp HHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred HHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 34788899999888774 223666778998888875
No 98
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.44 E-value=75 Score=19.35 Aligned_cols=54 Identities=9% Similarity=0.177 Sum_probs=36.7
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec--CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF--GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~--~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++||+.. .-..+-+.++..+||+|..+.+. +.-+|...+++.++..+.. ++..+
T Consensus 19 ~V~nLp~-------~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 75 (108)
T 1x4c_A 19 VVSGLPP-------SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF 75 (108)
T ss_dssp EEESCCS-------SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHHSSSEEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHHHCcCCc
Confidence 5777642 23445567788899998888764 4456777799999888863 34444
No 99
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.52 E-value=92 Score=19.09 Aligned_cols=45 Identities=11% Similarity=0.091 Sum_probs=30.5
Q ss_pred chHHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHhhCCcee
Q 025228 59 PEPFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQNEGKLF 103 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~~~~~~~ 103 (256)
...-+.++..+||+|..+.+. |.-+|...+++.+..++..++..+
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 91 (114)
T 2cq4_A 38 RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 91 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEE
T ss_pred CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCCCEe
Confidence 344567778899998888764 123566778888888884444444
No 100
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.64 E-value=62 Score=18.99 Aligned_cols=45 Identities=20% Similarity=0.204 Sum_probs=30.1
Q ss_pred chHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhh-CCcee
Q 025228 59 PEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
...-+.++..+||+|..+.+.. .-+|...+++.+..++.. ++..+
T Consensus 18 t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 72 (95)
T 2dnz_A 18 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL 72 (95)
T ss_dssp CHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCee
Confidence 3445677778999988776632 125667799999988863 34334
No 101
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.90 E-value=87 Score=18.50 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=28.9
Q ss_pred chHHHHHHHHHcCCceEeeecC---CCEEEeeChHHHHHHHhh
Q 025228 59 PEPFIDVRVKRFGSIFTTHIFG---EPTVFSADPETNRFILQN 98 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~~---~~~v~v~~p~~~~~il~~ 98 (256)
..+-+.++..+||+|..+.+.. .-+|...+++.+...+..
T Consensus 26 t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 26 TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3445677888999998887742 235666789988888854
No 102
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=26.65 E-value=1.2e+02 Score=19.41 Aligned_cols=36 Identities=14% Similarity=0.200 Sum_probs=26.2
Q ss_pred HHHHHHHcCCceEeeec------CCCEEEeeChHHHHHHHhh
Q 025228 63 IDVRVKRFGSIFTTHIF------GEPTVFSADPETNRFILQN 98 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~------~~~~v~v~~p~~~~~il~~ 98 (256)
+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 50 L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 50 LYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp HHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred HHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 45677899999877663 2346777788888888743
No 103
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.52 E-value=64 Score=18.87 Aligned_cols=49 Identities=10% Similarity=0.006 Sum_probs=32.3
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec-----C----CCEEEeeChHHHHHHHhh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF-----G----EPTVFSADPETNRFILQN 98 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-----~----~~~v~v~~p~~~~~il~~ 98 (256)
++|++.. .-..+-+.++..+||+|..+.+. + .-+|-..+++.+..++..
T Consensus 19 ~v~nlp~-------~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 19 GVFGLSL-------YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp EEESCCS-------SCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC-------CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 5777642 22344566777899998777663 1 135667789999888863
No 104
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=25.50 E-value=78 Score=19.18 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=30.5
Q ss_pred hHHHHHHHHHcCCceEeeec-------CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 60 EPFIDVRVKRFGSIFTTHIF-------GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~-------~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
..-+.++..+||+|..+.+. |.-+|...+++.+...+.. ++..+
T Consensus 35 ~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~ 86 (105)
T 2nlw_A 35 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKL 86 (105)
T ss_dssp HHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEEC
T ss_pred HHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCccc
Confidence 35577788899998887764 2235677788888888764 34334
No 105
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=25.46 E-value=1e+02 Score=23.30 Aligned_cols=79 Identities=6% Similarity=-0.017 Sum_probs=44.1
Q ss_pred CCEEEeeChHHHHHHHhhCCceee-----ecCcccccccc-----Cccccccc-CchhHHHHHHHHHhhcChhhHHhhhH
Q 025228 81 EPTVFSADPETNRFILQNEGKLFE-----CSYPGSISNLL-----GKHSLLLM-KGSLHKRMHSLTMSFANSSIIRDHLL 149 (256)
Q Consensus 81 ~~~v~v~~p~~~~~il~~~~~~~~-----~~~~~~~~~~~-----g~~~l~~~-~g~~w~~~R~~~~~~f~~~~l~~~~~ 149 (256)
+..+||.|+..+++-|..-.++.. .+.+..+.... ...++... ++..|+--|---.|.|+..+=++ ..
T Consensus 148 r~AIVV~Dl~~~~~~L~~l~dcPeDLyLIegd~daFdDs~~~~eele~~v~V~~s~rqlRySr~Pe~PlfGraARE~-rl 226 (302)
T 3ibp_A 148 RHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARES-RI 226 (302)
T ss_dssp GSEEECSSCHHHHHHHTTCCSSCSSCEEECSCSTTCCCCCCCEEEETTEEEEEEETTEEEEEECCSSCSSCHHHHHH-HH
T ss_pred ceeeEeCCHHHHHHHHhhccCCCcceEEeeCChhhhccccchHHHhcCCeEEEeCCceeeecCCCCCCcccHHHHHH-HH
Confidence 468999999999999955433221 11111121111 11344443 56778777776677888765554 44
Q ss_pred HHHHHHHHHHH
Q 025228 150 VDIDRLVRLHM 160 (256)
Q Consensus 150 ~~~~~~~~~~~ 160 (256)
..+....+.+.
T Consensus 227 e~L~~ere~~~ 237 (302)
T 3ibp_A 227 ESLHAEREVLS 237 (302)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55554444433
No 106
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.31 E-value=70 Score=20.37 Aligned_cols=48 Identities=8% Similarity=0.047 Sum_probs=33.1
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec---CCCEEEeeChHHHHHHHh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF---GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~---~~~~v~v~~p~~~~~il~ 97 (256)
++||+.. .-...-+.++..+||.|..+.+. |.-+|-..+.+.+..++.
T Consensus 35 fVgNLp~-------~vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 35 HIRKLPI-------DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEESCCT-------TCCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 6787653 22344567788899998877764 334666778888888874
No 107
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=25.31 E-value=1.1e+02 Score=18.14 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=28.0
Q ss_pred hHHHHHHHHHcCCceEeeec-CCCEEEeeChHHHHHHHh
Q 025228 60 EPFIDVRVKRFGSIFTTHIF-GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~-~~~~v~v~~p~~~~~il~ 97 (256)
..-+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 37 ~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~ 75 (97)
T 2xnq_A 37 KEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIE 75 (97)
T ss_dssp HHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHH
Confidence 34566778899999888773 334566778998888885
No 108
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=25.15 E-value=34 Score=21.17 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=26.6
Q ss_pred HHHHHHHcCCceEeeecCC-CEEEeeChHHHHHHHhh
Q 025228 63 IDVRVKRFGSIFTTHIFGE-PTVFSADPETNRFILQN 98 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~~~-~~v~v~~p~~~~~il~~ 98 (256)
+.++...||.+.--|+-.. -.+++.+|+.+++++..
T Consensus 22 i~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 22 LYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp HHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 4456678887655566554 57888999999999964
No 109
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=24.80 E-value=91 Score=18.40 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=30.7
Q ss_pred hHHHHHHHHHcCCceEeeec-CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 60 EPFIDVRVKRFGSIFTTHIF-GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~-~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
..-+.++..+||+|..+.+. |.-+|...+++.+..++.. ++..+
T Consensus 25 ~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~ 70 (96)
T 2kvi_A 25 KEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMN 70 (96)
T ss_dssp HHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCee
Confidence 34566777899998887763 3346777799999988863 34334
No 110
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=24.71 E-value=70 Score=18.35 Aligned_cols=51 Identities=16% Similarity=0.249 Sum_probs=33.5
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec-----C----CCEEEeeChHHHHHHHhhCC
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF-----G----EPTVFSADPETNRFILQNEG 100 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-----~----~~~v~v~~p~~~~~il~~~~ 100 (256)
++|++.. .-...-+.++..+||+|..+.+. + .-.|...+++.+..++...+
T Consensus 15 ~V~nlp~-------~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~ 74 (87)
T 3s7r_A 15 FVGGLSW-------DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKE 74 (87)
T ss_dssp EEECCCT-------TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSC
T ss_pred EEeCCCC-------CCCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCC
Confidence 5677642 22344566777899998777653 1 13566779999998885543
No 111
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=23.88 E-value=1e+02 Score=18.84 Aligned_cols=43 Identities=14% Similarity=0.075 Sum_probs=27.4
Q ss_pred HHHHHHHHcCCceEeeecC---------CC--EEEeeChHHHHHHHhh-CCceee
Q 025228 62 FIDVRVKRFGSIFTTHIFG---------EP--TVFSADPETNRFILQN-EGKLFE 104 (256)
Q Consensus 62 ~~~~~~~~~g~v~~~~~~~---------~~--~v~v~~p~~~~~il~~-~~~~~~ 104 (256)
-+.+...+||+|..+.+.. +. .|-..+++.+...... ++..|.
T Consensus 31 dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~ 85 (105)
T 3v4m_A 31 DVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFA 85 (105)
T ss_dssp HHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred HHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeC
Confidence 4555667999998887631 12 4666688877777632 455554
No 112
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=23.66 E-value=1.2e+02 Score=18.11 Aligned_cols=37 Identities=11% Similarity=0.087 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHh
Q 025228 61 PFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 61 ~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~ 97 (256)
.-+.++..+||+|..+.+. |.-.|...+++.+...+.
T Consensus 27 ~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 27 KALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp HHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 3456777899998887763 223577778888888874
No 113
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=23.55 E-value=54 Score=22.18 Aligned_cols=35 Identities=9% Similarity=0.076 Sum_probs=24.5
Q ss_pred CCCCCCCCCCccchHHHHHHhhhcCCchHHHHH-HHHHcCC
Q 025228 33 RLPPGSLGLPFLGETLQLIAAYKTENPEPFIDV-RVKRFGS 72 (256)
Q Consensus 33 ~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~g~ 72 (256)
..+|.|++-|++=.+..+.. .....+.. .++++|+
T Consensus 83 ~~~~~~ptdP~iYR~yE~v~-----vYG~~~K~li~E~FGD 118 (156)
T 1dw9_A 83 CIDDRIPTDPTMYRFYEMLQ-----VYGTTLKALVHEKFGD 118 (156)
T ss_dssp CCSSSSCCSHHHHHHHHHHH-----HHHHHHHHHHHHHTCS
T ss_pred CCCCCCCCCCeehhHHHHHH-----HhhHHHHHHHHHHcCc
Confidence 46778888888888877763 23344544 5889998
No 114
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.38 E-value=46 Score=19.09 Aligned_cols=38 Identities=13% Similarity=0.120 Sum_probs=25.8
Q ss_pred hHHHHHHHHHcCCceEeeecCC---------CEEEeeChHHHHHHHh
Q 025228 60 EPFIDVRVKRFGSIFTTHIFGE---------PTVFSADPETNRFILQ 97 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~~~---------~~v~v~~p~~~~~il~ 97 (256)
.+-+.++..+||+|..+.+... -.|...+++.+..++.
T Consensus 19 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 19 DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp HHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3445666678999887765321 3566778888888874
No 115
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.21 E-value=1.2e+02 Score=17.54 Aligned_cols=54 Identities=13% Similarity=0.192 Sum_probs=35.7
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC-CCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG-EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~-~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-...-+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+
T Consensus 13 ~V~nlp~-------~~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~l~g~~~ 68 (90)
T 2dnp_A 13 FVGNVSA-------ACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEV 68 (90)
T ss_dssp EEESCCT-------TCCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHHHTTCEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHHhCCCEE
Confidence 5777642 223445667778999998887743 346677799988888753 44444
No 116
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=22.94 E-value=1.1e+02 Score=18.04 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=30.3
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceE--------eeecC---------CCEEEeeChHHHHHHHh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFT--------THIFG---------EPTVFSADPETNRFILQ 97 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~--------~~~~~---------~~~v~v~~p~~~~~il~ 97 (256)
++||+.. .-..+-+.++..+||.|.. +.+.. .-.|...+++.++..+.
T Consensus 17 ~V~nLp~-------~~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 17 FVQGLGE-------NVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp EEECCCS-------SCCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 5777642 2234456677789999866 54421 12566678888888774
No 117
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.71 E-value=1.1e+02 Score=18.02 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=30.7
Q ss_pred chHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhhCCcee
Q 025228 59 PEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQNEGKLF 103 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~~~~~~ 103 (256)
...-+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+
T Consensus 23 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~ 76 (99)
T 2dgs_A 23 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDI 76 (99)
T ss_dssp CHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBS
T ss_pred CHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEE
Confidence 3445677778999988777632 13566779999999886444444
No 118
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.67 E-value=1.2e+02 Score=17.66 Aligned_cols=54 Identities=11% Similarity=0.241 Sum_probs=35.1
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecCC-CEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGE-PTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~-~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-..+-+.++..+||+|..+.+... -+|-..+++.+...+.. ++..+
T Consensus 14 ~V~nLp~-------~~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~ 69 (92)
T 2dgt_A 14 HVGNISP-------TCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEF 69 (92)
T ss_dssp EEESCCS-------SCCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHHHTTEEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHHhCCCee
Confidence 5677642 2334556778889999888877433 35666788888888853 44334
No 119
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.57 E-value=1.2e+02 Score=17.54 Aligned_cols=48 Identities=6% Similarity=0.109 Sum_probs=33.1
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQ 97 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~ 97 (256)
+++++.. .-..+-+.++..+||+|..+.+.. .-+|-..+++.+..++.
T Consensus 20 ~V~nlp~-------~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 20 YVSNLPF-------SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp EEESCCT-------TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred EEECCCC-------CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 5777652 223445677778999988877632 23677789999988884
No 120
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.51 E-value=1.4e+02 Score=18.05 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=32.8
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQN 98 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~ 98 (256)
++|++.. .-...-+.++..+||+|..+.+.. .-+|-..+++.+..++..
T Consensus 19 ~V~nLp~-------~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 19 FIRNLSF-------DSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp EEESCCT-------TCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC-------CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 6777652 223445667778999988777641 125666799999888854
No 121
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.20 E-value=1.4e+02 Score=18.22 Aligned_cols=45 Identities=20% Similarity=0.121 Sum_probs=30.8
Q ss_pred chHHHHHHHHHcCCceEeeec---CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 59 PEPFIDVRVKRFGSIFTTHIF---GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~---~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
...-+.++..+||+|..+.+. +.-+|...+++.++..+.. ++..+
T Consensus 23 te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~ 71 (111)
T 1whx_A 23 LAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKF 71 (111)
T ss_dssp CHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBS
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEE
Confidence 344567788899999888763 2346777788888888753 34444
No 122
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.18 E-value=1.2e+02 Score=17.43 Aligned_cols=38 Identities=16% Similarity=0.209 Sum_probs=27.7
Q ss_pred hHHHHHHHHHcCCceEeeec-CCCEEEeeChHHHHHHHh
Q 025228 60 EPFIDVRVKRFGSIFTTHIF-GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~-~~~~v~v~~p~~~~~il~ 97 (256)
..-+.++..+||+|..+.+. +.-+|-..+++.+..++.
T Consensus 22 ~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 22 EQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp HHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 34566777899998887764 234666778999888874
No 123
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=22.12 E-value=1.3e+02 Score=17.87 Aligned_cols=54 Identities=11% Similarity=0.199 Sum_probs=35.6
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC-CCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG-EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~-~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-...-+.++..+||+|..+.+.. .-+|-..+++.+...+.. ++..+
T Consensus 15 ~V~nl~~-------~~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~ 70 (103)
T 2dgu_A 15 FVRNLAN-------TVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDL 70 (103)
T ss_dssp EEECCCT-------TCCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHHHTTEEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHHHCCCcc
Confidence 5676642 223445667778999998887743 346677799999988863 44333
No 124
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=22.10 E-value=1.4e+02 Score=18.67 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=35.5
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++||+.. .-...-+.++..+||+|..+.+. +.-+|...+++.+..++.. ++..+
T Consensus 26 ~V~nlp~-------~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 89 (126)
T 3ex7_B 26 FVTGVHE-------EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDL 89 (126)
T ss_dssp EEESCCT-------TCCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBS
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCee
Confidence 5677642 22344566777899998877763 2336777899999988853 44444
No 125
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=21.64 E-value=1.4e+02 Score=17.91 Aligned_cols=49 Identities=10% Similarity=0.066 Sum_probs=32.0
Q ss_pred CCccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC-C--CEEEeeChHHHHHHH
Q 025228 41 LPFLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG-E--PTVFSADPETNRFIL 96 (256)
Q Consensus 41 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~-~--~~v~v~~p~~~~~il 96 (256)
|-++||+.. .-...-++++..+||+|..+.+.. + -+|-..+++.+....
T Consensus 9 wL~VgNL~~-------~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai 60 (89)
T 2wbr_A 9 WLLLKNLTA-------QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQ 60 (89)
T ss_dssp EEEEECCCT-------TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred eEEEeCCCc-------cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHH
Confidence 446777642 234456778889999998887632 2 355566776666655
No 126
>1ufw_A Synaptojanin 2; RNP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.55 E-value=1.1e+02 Score=18.76 Aligned_cols=41 Identities=20% Similarity=0.224 Sum_probs=27.4
Q ss_pred HHHHHHHcCCceEeeecC-CCEEEeeChHHHHHHHhhCCcee
Q 025228 63 IDVRVKRFGSIFTTHIFG-EPTVFSADPETNRFILQNEGKLF 103 (256)
Q Consensus 63 ~~~~~~~~g~v~~~~~~~-~~~v~v~~p~~~~~il~~~~~~~ 103 (256)
+.+....||.|..+++.. +-+|...|.+.+..++..++..+
T Consensus 41 L~~~F~~~G~Vilvr~v~d~~fVtF~d~~sAl~AI~ldG~~v 82 (95)
T 1ufw_A 41 LMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKV 82 (95)
T ss_dssp HHHHHHHHSCCSEEEEETTEEEEECSCSHHHHHHHHGGGSEE
T ss_pred HHHHHHHCCCEEEEEEecCcEEEEEcChHHHHHHHhcCCeee
Confidence 334445799988888744 44566668888888876555544
No 127
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.54 E-value=1e+02 Score=18.34 Aligned_cols=54 Identities=11% Similarity=0.031 Sum_probs=35.2
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-...-+.++..+||+|..+.+. +.-+|...+++.+..++.. ++..+
T Consensus 17 ~V~nLp~-------~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2dnm_A 17 KVDNLTY-------RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAEL 80 (103)
T ss_dssp EEESCCT-------TCCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCB
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEE
Confidence 5777642 22344566777899998887763 2236777789988888863 44334
No 128
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=21.31 E-value=1.3e+02 Score=18.20 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=34.9
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-...-+.++..+||+|..+.+. |.-+|-..+++.+..++.. ++..+
T Consensus 30 ~V~nlp~-------~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~ 93 (110)
T 1oo0_B 30 FVTSIHE-------EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEI 93 (110)
T ss_dssp EEESCCT-------TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEE
Confidence 5677642 22344566788899998887763 1235667799999888853 34334
No 129
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.29 E-value=1.1e+02 Score=18.34 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=35.3
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhhCCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQNEGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~~~~~~ 103 (256)
++|++.. .-...-+.++..+||+|..+.+.. .-+|-..+++.++.++..+...+
T Consensus 20 ~V~nlp~-------~~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~ 82 (105)
T 2dh8_A 20 FVGGLDW-------STTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTL 82 (105)
T ss_dssp CCBSCCT-------TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeE
Confidence 5777642 223445667778999987776532 13567779999999987644333
No 130
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.22 E-value=88 Score=18.55 Aligned_cols=49 Identities=8% Similarity=0.030 Sum_probs=32.6
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC--------CCEEEeeChHHHHHHHhh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG--------EPTVFSADPETNRFILQN 98 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~--------~~~v~v~~p~~~~~il~~ 98 (256)
++|++.. .-..+-+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 21 ~v~nlp~-------~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 21 FISGLPF-------SCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEESCCT-------TCCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 5677642 223445667778999987776632 236677799999888843
No 131
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=21.20 E-value=1.2e+02 Score=17.05 Aligned_cols=44 Identities=16% Similarity=0.063 Sum_probs=29.1
Q ss_pred hHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhh-CCcee
Q 025228 60 EPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 60 ~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
..-+.++..+||+|..+.+.. .-.|-..+++.+...+.. ++..+
T Consensus 21 ~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 74 (85)
T 3mdf_A 21 DKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL 74 (85)
T ss_dssp HHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHHhCCCEE
Confidence 445667778999987776521 135677789988888743 34333
No 132
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.18 E-value=1.2e+02 Score=18.06 Aligned_cols=54 Identities=13% Similarity=0.110 Sum_probs=35.0
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC-------CCEEEeeChHHHHHHHhh-CCcee
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG-------EPTVFSADPETNRFILQN-EGKLF 103 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~-------~~~v~v~~p~~~~~il~~-~~~~~ 103 (256)
++|++.. .-...-+.++..+||+|..+.+.. .-+|...+++.+..++.. ++..+
T Consensus 19 ~V~nlp~-------~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 80 (103)
T 2cq3_A 19 HVSNIPF-------RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVV 80 (103)
T ss_dssp EEESCCT-------TCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEE
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHHhCCCEE
Confidence 5777642 223445667778999988877632 235667799999888853 44444
No 133
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=20.65 E-value=1e+02 Score=19.19 Aligned_cols=45 Identities=13% Similarity=0.126 Sum_probs=30.5
Q ss_pred chHHHHHHHHHcCCceEeeecC---------CCEEEeeChHHHHHHHhhCCcee
Q 025228 59 PEPFIDVRVKRFGSIFTTHIFG---------EPTVFSADPETNRFILQNEGKLF 103 (256)
Q Consensus 59 ~~~~~~~~~~~~g~v~~~~~~~---------~~~v~v~~p~~~~~il~~~~~~~ 103 (256)
..+-+.++..+||+|..+.+.. .-+|...+++.+...+..++..+
T Consensus 49 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~ 102 (124)
T 2jwn_A 49 TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVF 102 (124)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeE
Confidence 3455677888999987776521 23577789999998884444444
No 134
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.32 E-value=83 Score=18.81 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=32.1
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeecC-------CCEEEeeChHHHHHHHh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFG-------EPTVFSADPETNRFILQ 97 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~-------~~~v~v~~p~~~~~il~ 97 (256)
++|++.. .-...-+.++..+||+|..+.+.. .-+|...+++.+..++.
T Consensus 19 ~V~nlp~-------~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2d9p_A 19 YVKNLDD-------GIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVT 73 (103)
T ss_dssp EEECCCT-------TCCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHH
Confidence 6777642 223344666777999987776641 23567779999988885
No 135
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.22 E-value=1.4e+02 Score=17.68 Aligned_cols=49 Identities=12% Similarity=0.066 Sum_probs=32.2
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHH-cCCceEeeecC--------CCEEEeeChHHHHHHHhh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKR-FGSIFTTHIFG--------EPTVFSADPETNRFILQN 98 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~~~~~~~--------~~~v~v~~p~~~~~il~~ 98 (256)
++|++.. .-..+-+.++..+ ||+|..+.+.. .-+|-..+++.+..++..
T Consensus 13 ~V~nLp~-------~~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 13 FVGDLTP-------DVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp EEECCCT-------TCCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 6777652 2233445667778 99987776521 235677799999988863
No 136
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=20.17 E-value=1.2e+02 Score=18.20 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=32.0
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec---------CCCEEEeeChHHHHHHHh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF---------GEPTVFSADPETNRFILQ 97 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~---------~~~~v~v~~p~~~~~il~ 97 (256)
++|++.. .-...-+.++..+||+|..+.+. |.-+|-..+++.+..++.
T Consensus 27 ~V~nlp~-------~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 83 (106)
T 1p27_B 27 FVTGVHE-------EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAME 83 (106)
T ss_dssp EEECCCT-------TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 5676642 22344567788899998877663 123566778898888885
No 137
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=20.09 E-value=1.1e+02 Score=17.67 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=32.0
Q ss_pred ccchHHHHHHhhhcCCchHHHHHHHHHcCCceEeeec-------CCCEEEeeChHHHHHHHhh
Q 025228 43 FLGETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIF-------GEPTVFSADPETNRFILQN 98 (256)
Q Consensus 43 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-------~~~~v~v~~p~~~~~il~~ 98 (256)
++|++.. .-...-+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 12 ~V~nlp~-------~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 12 FVRNLPF-------DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EECSCCT-------TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC-------CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 5676642 22344566777899998777653 1235666788888888753
Done!