Query 025236
Match_columns 256
No_of_seqs 226 out of 1430
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 03:52:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025236.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025236hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02230 Abhydrolase_2: Phosph 100.0 2.8E-31 6.1E-36 197.2 17.1 207 24-249 5-216 (216)
2 PRK11460 putative hydrolase; P 100.0 3.3E-27 7.2E-32 176.7 18.7 195 27-251 10-211 (232)
3 KOG1455 Lysophospholipase [Lip 99.9 2.3E-26 5.1E-31 169.8 14.8 201 17-248 37-312 (313)
4 PHA02857 monoglyceride lipase; 99.9 1.8E-25 3.8E-30 172.9 18.3 190 27-248 19-273 (276)
5 KOG2112 Lysophospholipase [Lip 99.9 2.4E-25 5.2E-30 156.3 16.2 198 32-247 2-203 (206)
6 PRK13604 luxD acyl transferase 99.9 5.2E-25 1.1E-29 167.0 17.7 189 15-235 17-247 (307)
7 PLN02385 hydrolase; alpha/beta 99.9 5.3E-25 1.1E-29 175.3 18.3 196 27-250 81-347 (349)
8 PRK10566 esterase; Provisional 99.9 9.2E-25 2E-29 166.4 18.4 197 31-249 25-249 (249)
9 PLN02298 hydrolase, alpha/beta 99.9 7.8E-24 1.7E-28 167.6 20.5 193 31-251 57-320 (330)
10 PRK10749 lysophospholipase L2; 99.9 3.3E-24 7.1E-29 169.4 18.2 197 31-247 52-328 (330)
11 COG0400 Predicted esterase [Ge 99.9 4.2E-24 9E-29 154.3 17.0 190 27-249 12-206 (207)
12 PLN02652 hydrolase; alpha/beta 99.9 2.1E-23 4.6E-28 166.9 18.9 197 29-251 132-390 (395)
13 COG2267 PldB Lysophospholipase 99.9 1.5E-23 3.3E-28 161.8 16.6 197 27-250 28-296 (298)
14 TIGR02240 PHA_depoly_arom poly 99.9 2.7E-23 5.8E-28 160.6 17.6 183 31-250 23-264 (276)
15 TIGR03611 RutD pyrimidine util 99.9 4E-23 8.6E-28 157.8 17.7 184 31-249 11-255 (257)
16 PLN02824 hydrolase, alpha/beta 99.9 6E-23 1.3E-27 160.1 17.5 188 32-248 28-290 (294)
17 TIGR02821 fghA_ester_D S-formy 99.9 4.2E-22 9E-27 153.3 20.8 207 30-249 39-275 (275)
18 PLN02965 Probable pheophorbida 99.9 1E-22 2.2E-27 155.6 17.2 183 34-249 4-250 (255)
19 COG1506 DAP2 Dipeptidyl aminop 99.9 1.5E-22 3.3E-27 171.3 17.5 197 33-251 394-619 (620)
20 PRK10349 carboxylesterase BioH 99.9 1.7E-22 3.8E-27 154.5 16.2 173 30-243 10-247 (256)
21 PRK00870 haloalkane dehalogena 99.9 5.8E-22 1.3E-26 155.1 18.4 186 32-248 45-297 (302)
22 TIGR02427 protocat_pcaD 3-oxoa 99.9 3.6E-22 7.8E-27 151.7 16.8 182 32-249 12-250 (251)
23 PF01738 DLH: Dienelactone hyd 99.9 7.4E-23 1.6E-27 152.6 11.9 198 24-249 4-218 (218)
24 COG1647 Esterase/lipase [Gener 99.9 2E-22 4.3E-27 142.2 13.3 180 34-246 16-242 (243)
25 TIGR01738 bioH putative pimelo 99.9 6.9E-22 1.5E-26 149.7 16.9 173 33-246 4-242 (245)
26 PF12695 Abhydrolase_5: Alpha/ 99.9 3.5E-22 7.7E-27 139.5 13.4 145 35-232 1-145 (145)
27 PRK05077 frsA fermentation/res 99.9 1.3E-21 2.7E-26 158.0 18.4 192 24-249 185-413 (414)
28 TIGR03056 bchO_mg_che_rel puta 99.9 2E-21 4.4E-26 150.3 18.3 181 32-247 27-275 (278)
29 PF00326 Peptidase_S9: Prolyl 99.9 1.6E-22 3.4E-27 150.3 11.4 181 49-251 3-212 (213)
30 PLN02442 S-formylglutathione h 99.9 3.1E-21 6.8E-26 148.8 18.9 202 30-249 44-274 (283)
31 PRK10673 acyl-CoA esterase; Pr 99.9 1.2E-21 2.6E-26 149.8 16.1 180 31-247 14-254 (255)
32 TIGR03343 biphenyl_bphD 2-hydr 99.9 3.7E-21 8E-26 149.2 17.5 179 33-245 30-280 (282)
33 PLN02211 methyl indole-3-aceta 99.9 5E-21 1.1E-25 147.2 17.7 186 31-250 16-268 (273)
34 PF12697 Abhydrolase_6: Alpha/ 99.9 1.6E-21 3.4E-26 146.0 13.2 175 36-244 1-228 (228)
35 PRK03592 haloalkane dehalogena 99.9 7.8E-21 1.7E-25 148.3 17.0 181 33-248 27-289 (295)
36 PLN02679 hydrolase, alpha/beta 99.9 1.2E-20 2.6E-25 150.7 18.1 185 33-247 88-356 (360)
37 TIGR01607 PST-A Plasmodium sub 99.9 7.7E-21 1.7E-25 149.9 16.3 199 31-246 19-331 (332)
38 TIGR03695 menH_SHCHC 2-succiny 99.9 1.6E-20 3.4E-25 142.6 16.8 181 33-248 1-249 (251)
39 KOG1552 Predicted alpha/beta h 99.9 7.1E-21 1.5E-25 138.2 14.0 194 23-251 50-255 (258)
40 PLN03087 BODYGUARD 1 domain co 99.9 2.1E-20 4.6E-25 151.8 17.6 183 32-248 200-475 (481)
41 PRK11126 2-succinyl-6-hydroxy- 99.9 3.8E-20 8.2E-25 140.4 17.8 98 33-163 2-100 (242)
42 PLN02578 hydrolase 99.9 3.6E-20 7.8E-25 147.8 17.6 179 33-248 86-351 (354)
43 KOG1454 Predicted hydrolase/ac 99.9 3.9E-20 8.5E-25 144.3 17.0 184 31-247 56-323 (326)
44 PRK03204 haloalkane dehalogena 99.9 4.7E-20 1E-24 143.0 17.1 181 33-248 34-284 (286)
45 PRK06489 hypothetical protein; 99.9 1.1E-19 2.4E-24 145.4 19.5 188 33-248 69-357 (360)
46 COG0412 Dienelactone hydrolase 99.9 8.7E-20 1.9E-24 136.2 17.5 201 24-250 17-235 (236)
47 PRK14875 acetoin dehydrogenase 99.9 7.3E-20 1.6E-24 147.4 17.7 181 31-250 129-369 (371)
48 PRK10162 acetyl esterase; Prov 99.9 1.7E-19 3.8E-24 141.4 19.1 199 26-250 74-317 (318)
49 PRK11071 esterase YqiA; Provis 99.8 7.1E-20 1.5E-24 132.8 14.7 161 34-246 2-189 (190)
50 PLN03084 alpha/beta hydrolase 99.8 2.3E-19 4.9E-24 143.0 18.4 185 32-249 126-381 (383)
51 PLN02511 hydrolase 99.8 1.3E-19 2.9E-24 145.6 17.2 190 31-251 98-368 (388)
52 TIGR01250 pro_imino_pep_2 prol 99.8 3.1E-19 6.7E-24 138.4 18.5 181 32-245 24-283 (288)
53 KOG4178 Soluble epoxide hydrol 99.8 2.9E-19 6.4E-24 134.5 16.8 107 29-163 40-146 (322)
54 PRK07581 hypothetical protein; 99.8 4E-19 8.6E-24 141.3 18.5 196 32-250 40-338 (339)
55 TIGR01840 esterase_phb esteras 99.8 1E-19 2.2E-24 134.9 13.5 169 30-216 10-197 (212)
56 PRK10985 putative hydrolase; P 99.8 4.6E-19 1E-23 139.7 17.9 191 31-250 56-322 (324)
57 PLN02894 hydrolase, alpha/beta 99.8 5.9E-19 1.3E-23 142.5 17.6 190 31-252 103-389 (402)
58 KOG4409 Predicted hydrolase/ac 99.8 5.8E-19 1.2E-23 133.4 16.2 108 30-164 87-194 (365)
59 TIGR01249 pro_imino_pep_1 prol 99.8 1.1E-18 2.4E-23 136.8 18.4 58 187-249 248-306 (306)
60 PRK08775 homoserine O-acetyltr 99.8 6.3E-19 1.4E-23 140.2 15.2 165 48-247 84-338 (343)
61 PF05448 AXE1: Acetyl xylan es 99.8 2.7E-18 5.9E-23 133.4 16.3 208 23-248 72-320 (320)
62 TIGR01392 homoserO_Ac_trn homo 99.8 6.4E-18 1.4E-22 134.8 18.7 115 32-163 30-160 (351)
63 TIGR03100 hydr1_PEP hydrolase, 99.8 4.3E-18 9.3E-23 131.1 17.1 183 32-246 25-273 (274)
64 COG3208 GrsT Predicted thioest 99.8 9.4E-18 2E-22 121.3 16.9 189 31-251 5-235 (244)
65 PLN02980 2-oxoglutarate decarb 99.8 1E-17 2.2E-22 154.7 19.2 194 32-249 1370-1640(1655)
66 PRK00175 metX homoserine O-ace 99.8 3.7E-17 8E-22 131.5 19.9 65 184-249 306-375 (379)
67 PRK10115 protease 2; Provision 99.8 1.2E-17 2.6E-22 142.7 16.9 212 18-250 427-677 (686)
68 KOG3043 Predicted hydrolase re 99.8 8E-18 1.7E-22 119.3 13.0 196 23-250 30-242 (242)
69 COG3458 Acetyl esterase (deace 99.8 1.8E-17 3.9E-22 120.7 13.4 213 18-249 67-318 (321)
70 KOG2551 Phospholipase/carboxyh 99.8 8.2E-17 1.8E-21 114.2 15.8 199 32-251 4-223 (230)
71 PRK05855 short chain dehydroge 99.8 1.3E-17 2.7E-22 142.1 14.1 91 32-139 24-114 (582)
72 PLN00021 chlorophyllase 99.8 3.7E-17 8E-22 127.0 15.1 179 24-232 43-240 (313)
73 KOG4391 Predicted alpha/beta h 99.8 6.3E-18 1.4E-22 119.1 9.1 190 30-251 75-285 (300)
74 PF06821 Ser_hydrolase: Serine 99.8 4.9E-17 1.1E-21 115.2 13.6 164 36-246 1-170 (171)
75 PF03959 FSH1: Serine hydrolas 99.7 9.1E-18 2E-22 124.0 9.9 183 32-234 3-203 (212)
76 KOG4667 Predicted esterase [Li 99.7 1.6E-16 3.4E-21 112.0 14.1 169 33-234 33-241 (269)
77 PF06500 DUF1100: Alpha/beta h 99.7 9.4E-17 2E-21 126.0 14.3 195 21-249 178-410 (411)
78 TIGR01836 PHA_synth_III_C poly 99.7 1.7E-16 3.8E-21 126.5 13.8 183 32-247 61-349 (350)
79 PRK06765 homoserine O-acetyltr 99.7 5E-15 1.1E-19 118.5 21.8 206 31-249 54-385 (389)
80 TIGR03101 hydr2_PEP hydrolase, 99.7 1.3E-15 2.9E-20 115.3 17.5 184 29-241 21-254 (266)
81 KOG1515 Arylacetamide deacetyl 99.7 2.7E-15 5.8E-20 116.3 17.9 192 31-248 88-335 (336)
82 KOG2382 Predicted alpha/beta h 99.7 2.7E-15 5.9E-20 113.3 15.4 196 18-246 38-311 (315)
83 PLN02872 triacylglycerol lipas 99.7 2.4E-16 5.3E-21 126.1 10.4 61 187-251 325-392 (395)
84 PF10503 Esterase_phd: Esteras 99.7 3.6E-15 7.9E-20 109.2 14.2 165 32-215 15-197 (220)
85 COG0657 Aes Esterase/lipase [L 99.7 1.2E-14 2.6E-19 114.2 17.4 175 31-233 77-288 (312)
86 COG0429 Predicted hydrolase of 99.7 5.1E-15 1.1E-19 111.7 14.2 195 28-251 70-343 (345)
87 COG2945 Predicted hydrolase of 99.7 5.1E-15 1.1E-19 102.7 13.1 172 30-246 25-205 (210)
88 PF07859 Abhydrolase_3: alpha/ 99.7 1.1E-15 2.4E-20 113.5 10.1 171 36-234 1-210 (211)
89 PF05728 UPF0227: Uncharacteri 99.6 1.7E-14 3.8E-19 103.2 15.0 158 36-245 2-186 (187)
90 COG4099 Predicted peptidase [G 99.6 6.7E-15 1.4E-19 108.8 12.9 175 33-248 191-385 (387)
91 KOG2100 Dipeptidyl aminopeptid 99.6 1.7E-14 3.7E-19 124.0 15.8 201 30-251 523-750 (755)
92 KOG2984 Predicted hydrolase [G 99.6 2.1E-14 4.5E-19 100.4 10.8 186 30-247 39-275 (277)
93 PF00561 Abhydrolase_1: alpha/ 99.6 3.1E-14 6.7E-19 106.9 12.4 153 61-244 1-227 (230)
94 PRK07868 acyl-CoA synthetase; 99.6 4.8E-14 1E-18 126.3 14.9 64 183-251 293-364 (994)
95 KOG2564 Predicted acetyltransf 99.6 9.7E-14 2.1E-18 101.9 12.6 94 30-139 71-166 (343)
96 COG3571 Predicted hydrolase of 99.6 1.2E-12 2.6E-17 88.2 16.1 175 24-234 5-183 (213)
97 TIGR01838 PHA_synth_I poly(R)- 99.5 1.6E-13 3.4E-18 113.2 14.2 179 24-234 177-457 (532)
98 PF12740 Chlorophyllase2: Chlo 99.5 3E-13 6.5E-18 100.4 13.2 179 24-232 8-205 (259)
99 PF06342 DUF1057: Alpha/beta h 99.5 2.7E-12 5.9E-17 95.2 18.1 106 28-163 30-135 (297)
100 PF08840 BAAT_C: BAAT / Acyl-C 99.5 1.4E-13 3E-18 101.7 11.2 138 99-250 4-212 (213)
101 PF03403 PAF-AH_p_II: Platelet 99.5 1.3E-13 2.7E-18 110.0 11.1 176 31-232 98-315 (379)
102 PRK05371 x-prolyl-dipeptidyl a 99.5 1.3E-12 2.9E-17 112.8 15.9 175 52-251 271-522 (767)
103 KOG1838 Alpha/beta hydrolase [ 99.5 1.9E-12 4.2E-17 101.3 15.1 111 31-164 123-235 (409)
104 COG3545 Predicted esterase of 99.5 3.6E-12 7.9E-17 87.6 13.7 130 99-247 41-178 (181)
105 PF07224 Chlorophyllase: Chlor 99.5 1.7E-12 3.7E-17 94.7 12.5 173 27-232 40-230 (307)
106 KOG3101 Esterase D [General fu 99.4 1.5E-12 3.2E-17 91.8 10.5 189 30-232 41-261 (283)
107 KOG2281 Dipeptidyl aminopeptid 99.4 3.8E-12 8.2E-17 103.4 13.9 198 30-247 639-866 (867)
108 KOG3847 Phospholipase A2 (plat 99.4 2.1E-12 4.6E-17 96.4 11.6 180 27-233 112-329 (399)
109 TIGR00976 /NonD putative hydro 99.4 9.2E-12 2E-16 105.1 17.0 115 24-164 13-131 (550)
110 PRK10439 enterobactin/ferric e 99.4 8.3E-12 1.8E-16 100.7 15.7 114 116-246 285-407 (411)
111 PF00975 Thioesterase: Thioest 99.4 1.1E-11 2.5E-16 93.1 15.0 186 34-249 1-229 (229)
112 COG4188 Predicted dienelactone 99.4 2.5E-12 5.5E-17 99.1 10.5 181 32-234 70-296 (365)
113 PF12715 Abhydrolase_7: Abhydr 99.4 3.2E-12 6.9E-17 99.2 10.7 179 24-228 105-343 (390)
114 PF02129 Peptidase_S15: X-Pro 99.4 2E-11 4.4E-16 94.1 14.3 183 20-232 5-271 (272)
115 PRK04940 hypothetical protein; 99.4 7E-11 1.5E-15 83.0 15.5 106 119-246 60-178 (180)
116 COG3509 LpqC Poly(3-hydroxybut 99.4 7.6E-12 1.7E-16 93.1 10.3 128 21-166 48-180 (312)
117 PF03583 LIP: Secretory lipase 99.4 2.9E-11 6.3E-16 93.4 13.8 67 186-253 218-286 (290)
118 KOG4627 Kynurenine formamidase 99.4 7.2E-12 1.6E-16 88.1 9.3 169 31-234 65-249 (270)
119 cd00707 Pancreat_lipase_like P 99.4 3.9E-12 8.5E-17 97.7 8.6 112 30-167 33-149 (275)
120 PF06028 DUF915: Alpha/beta hy 99.3 6.6E-12 1.4E-16 94.2 9.4 205 32-245 10-252 (255)
121 PF10230 DUF2305: Uncharacteri 99.3 6.9E-11 1.5E-15 90.3 14.9 180 32-233 1-265 (266)
122 TIGR01839 PHA_synth_II poly(R) 99.3 4.3E-11 9.2E-16 98.2 12.5 46 182-232 436-481 (560)
123 COG0596 MhpC Predicted hydrola 99.3 3.7E-10 8E-15 86.0 17.1 88 33-141 21-110 (282)
124 PF02273 Acyl_transf_2: Acyl t 99.3 2.1E-10 4.5E-15 83.1 13.6 173 31-234 28-239 (294)
125 TIGR03230 lipo_lipase lipoprot 99.3 3.6E-11 7.8E-16 96.7 10.8 111 31-167 39-156 (442)
126 PF08538 DUF1749: Protein of u 99.3 5E-11 1.1E-15 90.4 10.0 194 32-245 32-294 (303)
127 TIGR03502 lipase_Pla1_cef extr 99.3 3.9E-11 8.4E-16 102.5 9.8 108 32-140 448-576 (792)
128 COG0627 Predicted esterase [Ge 99.2 5.8E-10 1.2E-14 86.4 14.8 209 30-252 51-315 (316)
129 PF00756 Esterase: Putative es 99.2 1.5E-11 3.2E-16 93.9 5.9 129 104-245 98-251 (251)
130 PF07819 PGAP1: PGAP1-like pro 99.2 2.1E-10 4.6E-15 85.3 10.5 110 33-164 4-122 (225)
131 COG2021 MET2 Homoserine acetyl 99.2 3E-09 6.4E-14 82.2 16.7 117 31-163 49-180 (368)
132 COG4814 Uncharacterized protei 99.2 3.8E-09 8.3E-14 77.0 14.7 207 33-247 45-286 (288)
133 KOG3253 Predicted alpha/beta h 99.2 5.8E-10 1.3E-14 90.5 11.5 161 32-234 175-347 (784)
134 PF09752 DUF2048: Uncharacteri 99.1 9.5E-10 2.1E-14 84.8 9.8 180 31-232 90-328 (348)
135 COG4757 Predicted alpha/beta h 99.1 3.7E-09 8E-14 76.1 11.1 184 35-245 32-280 (281)
136 PF06057 VirJ: Bacterial virul 99.1 2.4E-09 5.1E-14 75.6 9.8 175 35-248 4-188 (192)
137 TIGR01849 PHB_depoly_PhaZ poly 99.0 1.4E-08 3.1E-13 81.1 14.8 65 183-247 333-405 (406)
138 PF12146 Hydrolase_4: Putative 99.0 8.4E-10 1.8E-14 67.6 5.9 50 26-75 9-58 (79)
139 PF11144 DUF2920: Protein of u 99.0 2.1E-08 4.6E-13 78.9 14.8 96 119-226 184-331 (403)
140 PF10340 DUF2424: Protein of u 99.0 1.1E-07 2.4E-12 74.7 16.6 196 23-246 108-364 (374)
141 COG1770 PtrB Protease II [Amin 99.0 4.4E-08 9.5E-13 80.9 14.8 195 18-233 430-657 (682)
142 KOG3975 Uncharacterized conser 99.0 7.4E-08 1.6E-12 70.3 14.2 102 29-139 25-130 (301)
143 PRK10252 entF enterobactin syn 98.9 3.3E-08 7.2E-13 92.2 15.3 183 33-250 1068-1295(1296)
144 PF12048 DUF3530: Protein of u 98.9 1.2E-06 2.5E-11 68.5 20.3 202 30-248 84-309 (310)
145 COG3150 Predicted esterase [Ge 98.9 9.7E-08 2.1E-12 65.3 11.9 158 36-245 2-186 (191)
146 COG2382 Fes Enterochelin ester 98.9 7.8E-08 1.7E-12 72.5 12.3 173 31-234 96-282 (299)
147 COG1505 Serine proteases of th 98.8 3.3E-08 7.2E-13 80.7 9.7 196 32-249 420-647 (648)
148 KOG2237 Predicted serine prote 98.8 1.5E-07 3.2E-12 77.5 12.9 200 31-251 468-708 (712)
149 KOG2624 Triglyceride lipase-ch 98.8 4.6E-08 1E-12 78.1 9.3 101 31-140 71-182 (403)
150 COG2272 PnbA Carboxylesterase 98.7 3E-08 6.5E-13 79.6 6.8 119 30-166 91-218 (491)
151 PF03096 Ndr: Ndr family; Int 98.7 3.4E-07 7.4E-12 69.2 11.4 179 31-241 21-268 (283)
152 PF05990 DUF900: Alpha/beta hy 98.7 6.6E-07 1.4E-11 67.1 12.5 147 31-203 16-169 (233)
153 COG3243 PhaC Poly(3-hydroxyalk 98.7 2.3E-07 5.1E-12 73.0 10.1 65 183-252 326-403 (445)
154 COG1073 Hydrolases of the alph 98.6 1.7E-07 3.6E-12 73.1 8.8 59 188-249 233-298 (299)
155 cd00312 Esterase_lipase Estera 98.6 7.4E-08 1.6E-12 80.8 7.1 116 30-165 92-213 (493)
156 COG2819 Predicted hydrolase of 98.6 2.8E-06 6.1E-11 63.4 14.2 125 106-246 122-259 (264)
157 COG3319 Thioesterase domains o 98.6 3.9E-07 8.5E-12 68.6 9.8 87 34-141 1-87 (257)
158 PF11339 DUF3141: Protein of u 98.6 1.4E-06 3.1E-11 70.4 12.8 105 15-141 46-162 (581)
159 PF00151 Lipase: Lipase; Inte 98.6 6.3E-08 1.4E-12 76.1 4.7 114 31-168 69-190 (331)
160 KOG2931 Differentiation-relate 98.5 7.4E-06 1.6E-10 61.6 13.9 172 32-235 45-289 (326)
161 PF10142 PhoPQ_related: PhoPQ- 98.5 1.5E-05 3.2E-10 63.2 15.9 220 18-253 48-325 (367)
162 PF05705 DUF829: Eukaryotic pr 98.5 8.8E-06 1.9E-10 61.6 14.2 188 34-244 1-239 (240)
163 PF01674 Lipase_2: Lipase (cla 98.5 1.2E-07 2.5E-12 69.8 3.5 113 35-163 3-121 (219)
164 PF00135 COesterase: Carboxyle 98.5 3.6E-07 7.7E-12 77.5 6.4 115 32-164 124-244 (535)
165 smart00824 PKS_TE Thioesterase 98.4 5.2E-06 1.1E-10 61.2 11.1 172 38-243 2-206 (212)
166 PF05057 DUF676: Putative seri 98.4 7.2E-07 1.6E-11 66.3 5.8 88 31-140 2-99 (217)
167 COG4782 Uncharacterized protei 98.3 1.9E-05 4.1E-10 61.3 12.0 119 31-169 114-238 (377)
168 PF05677 DUF818: Chlamydia CHL 98.3 0.00014 3E-09 56.3 16.2 94 28-139 132-235 (365)
169 KOG3724 Negative regulator of 98.2 7E-06 1.5E-10 69.5 7.7 93 33-139 89-202 (973)
170 KOG4840 Predicted hydrolases o 98.2 5.5E-05 1.2E-09 54.7 11.0 90 31-139 34-127 (299)
171 COG2936 Predicted acyl esteras 98.1 2.2E-05 4.7E-10 65.1 9.4 122 18-165 30-159 (563)
172 PF07082 DUF1350: Protein of u 98.1 0.00018 4E-09 53.3 12.7 195 23-249 8-233 (250)
173 PLN02733 phosphatidylcholine-s 98.0 1.3E-05 2.8E-10 65.5 6.4 79 44-140 105-183 (440)
174 PF04301 DUF452: Protein of un 98.0 0.00016 3.5E-09 52.9 10.6 35 192-234 170-204 (213)
175 PF00450 Peptidase_S10: Serine 98.0 0.00046 1E-08 56.8 14.3 65 186-250 329-414 (415)
176 COG1075 LipA Predicted acetylt 97.9 4.6E-05 9.9E-10 60.5 7.9 101 33-163 59-162 (336)
177 cd00741 Lipase Lipase. Lipase 97.9 0.00012 2.6E-09 51.3 8.7 75 116-203 25-99 (153)
178 COG3946 VirJ Type IV secretory 97.9 0.00038 8.2E-09 55.0 11.7 171 34-238 261-436 (456)
179 PF08386 Abhydrolase_4: TAP-li 97.9 4.7E-05 1E-09 49.4 5.4 55 187-246 34-92 (103)
180 KOG1516 Carboxylesterase and r 97.8 6.2E-05 1.3E-09 64.2 7.5 97 33-138 112-214 (545)
181 COG4947 Uncharacterized protei 97.7 0.00012 2.5E-09 50.8 5.8 100 119-232 101-215 (227)
182 PTZ00472 serine carboxypeptida 97.6 0.00062 1.3E-08 56.6 9.9 64 187-250 364-457 (462)
183 KOG1553 Predicted alpha/beta h 97.5 0.00053 1.2E-08 53.1 7.4 143 32-204 242-400 (517)
184 KOG4388 Hormone-sensitive lipa 97.4 0.007 1.5E-07 50.4 13.1 62 187-251 787-857 (880)
185 KOG2565 Predicted hydrolases o 97.3 0.0014 3.1E-08 51.4 8.0 90 33-140 152-250 (469)
186 KOG2521 Uncharacterized conser 97.3 0.021 4.6E-07 45.2 14.5 64 187-251 225-293 (350)
187 TIGR03712 acc_sec_asp2 accesso 97.3 0.028 6E-07 46.1 15.3 96 23-140 279-378 (511)
188 PF01764 Lipase_3: Lipase (cla 97.2 0.00086 1.9E-08 46.1 5.5 37 103-140 49-85 (140)
189 KOG3967 Uncharacterized conser 97.2 0.0057 1.2E-07 44.3 8.9 97 31-140 99-211 (297)
190 KOG2183 Prolylcarboxypeptidase 97.1 0.0055 1.2E-07 48.9 9.3 114 34-163 81-200 (492)
191 PLN02606 palmitoyl-protein thi 97.1 0.0051 1.1E-07 47.4 8.6 87 34-140 27-116 (306)
192 PF05577 Peptidase_S28: Serine 97.0 0.0038 8.3E-08 51.8 8.3 116 32-166 28-149 (434)
193 PF02450 LCAT: Lecithin:choles 97.0 0.003 6.5E-08 51.4 6.9 43 118-165 118-160 (389)
194 PF11187 DUF2974: Protein of u 96.9 0.0027 5.8E-08 47.3 5.6 56 99-163 66-121 (224)
195 KOG2541 Palmitoyl protein thio 96.8 0.016 3.6E-07 43.5 8.6 86 34-140 24-113 (296)
196 PF11288 DUF3089: Protein of u 96.7 0.0042 9.2E-08 45.3 5.3 40 101-140 77-116 (207)
197 PLN02633 palmitoyl protein thi 96.6 0.043 9.2E-07 42.6 10.4 35 120-163 95-129 (314)
198 KOG1551 Uncharacterized conser 96.6 0.017 3.7E-07 43.4 8.0 53 190-248 309-366 (371)
199 cd00519 Lipase_3 Lipase (class 96.6 0.0039 8.4E-08 46.9 4.6 25 116-140 125-149 (229)
200 PF02089 Palm_thioest: Palmito 96.6 0.013 2.9E-07 44.8 7.3 102 34-163 6-114 (279)
201 COG4287 PqaA PhoPQ-activated p 96.5 0.0067 1.4E-07 47.7 5.5 51 184-238 326-376 (507)
202 PLN02310 triacylglycerol lipas 96.3 0.0065 1.4E-07 49.0 4.6 23 118-140 208-230 (405)
203 PF07519 Tannase: Tannase and 96.2 0.014 2.9E-07 48.9 5.9 64 186-249 352-428 (474)
204 PLN02571 triacylglycerol lipas 96.1 0.0092 2E-07 48.2 4.6 38 103-140 209-247 (413)
205 PLN02408 phospholipase A1 96.1 0.01 2.3E-07 47.2 4.7 37 104-140 184-221 (365)
206 PLN02454 triacylglycerol lipas 96.1 0.013 2.8E-07 47.4 5.1 21 120-140 229-249 (414)
207 PLN02517 phosphatidylcholine-s 96.1 0.012 2.6E-07 49.5 5.1 22 118-139 212-233 (642)
208 PLN00413 triacylglycerol lipas 96.1 0.012 2.7E-07 48.2 5.0 36 103-139 269-304 (479)
209 PLN02162 triacylglycerol lipas 96.1 0.013 2.7E-07 48.0 5.0 36 103-139 263-298 (475)
210 PLN03037 lipase class 3 family 96.0 0.01 2.2E-07 49.1 4.5 23 118-140 317-339 (525)
211 PLN02934 triacylglycerol lipas 95.9 0.015 3.2E-07 48.1 4.9 35 104-139 307-341 (515)
212 PLN02324 triacylglycerol lipas 95.9 0.014 3.1E-07 47.1 4.6 37 104-140 199-236 (415)
213 PLN02753 triacylglycerol lipas 95.7 0.15 3.3E-06 42.6 9.7 38 103-140 292-333 (531)
214 PLN02802 triacylglycerol lipas 95.6 0.021 4.6E-07 47.2 4.7 37 104-140 314-351 (509)
215 PF01083 Cutinase: Cutinase; 95.6 0.042 9E-07 39.6 5.6 72 116-201 78-149 (179)
216 PF06850 PHB_depo_C: PHB de-po 95.6 0.027 5.9E-07 40.4 4.5 64 184-247 131-201 (202)
217 KOG1202 Animal-type fatty acid 95.4 0.27 5.8E-06 45.3 10.8 84 31-141 2121-2204(2376)
218 COG2939 Carboxypeptidase C (ca 95.4 0.19 4.2E-06 41.6 9.4 176 31-237 99-299 (498)
219 PLN02719 triacylglycerol lipas 95.4 0.2 4.4E-06 41.7 9.5 37 104-140 279-319 (518)
220 KOG4540 Putative lipase essent 95.4 0.034 7.3E-07 42.3 4.6 34 107-140 264-297 (425)
221 COG5153 CVT17 Putative lipase 95.4 0.034 7.3E-07 42.3 4.6 34 107-140 264-297 (425)
222 PF05277 DUF726: Protein of un 95.3 0.12 2.5E-06 41.2 7.6 73 116-201 217-289 (345)
223 PLN03016 sinapoylglucose-malat 95.1 0.26 5.7E-06 40.9 9.5 63 187-250 347-429 (433)
224 PLN02761 lipase class 3 family 94.9 0.045 9.7E-07 45.5 4.5 22 119-140 294-315 (527)
225 PLN02847 triacylglycerol lipas 94.7 0.063 1.4E-06 45.4 4.9 25 116-140 248-272 (633)
226 COG2830 Uncharacterized protei 94.6 0.088 1.9E-06 36.5 4.5 34 193-234 170-203 (214)
227 KOG4569 Predicted lipase [Lipi 94.5 0.053 1.2E-06 43.3 4.1 25 117-141 169-193 (336)
228 PLN02209 serine carboxypeptida 94.5 0.73 1.6E-05 38.3 10.6 63 187-250 351-433 (437)
229 KOG2369 Lecithin:cholesterol a 94.2 0.084 1.8E-06 43.2 4.5 26 116-141 179-204 (473)
230 PF06259 Abhydrolase_8: Alpha/ 94.2 0.22 4.8E-06 35.7 6.1 65 117-202 107-172 (177)
231 PF04083 Abhydro_lipase: Parti 93.9 0.055 1.2E-06 31.3 2.3 21 30-50 40-60 (63)
232 COG3673 Uncharacterized conser 93.9 0.39 8.5E-06 37.5 7.2 109 29-139 27-142 (423)
233 PF08237 PE-PPE: PE-PPE domain 93.6 0.51 1.1E-05 35.4 7.3 44 99-142 27-71 (225)
234 PF03283 PAE: Pectinacetyleste 93.0 3.5 7.7E-05 33.4 11.8 24 116-139 153-176 (361)
235 KOG1282 Serine carboxypeptidas 92.2 3.5 7.6E-05 34.4 11.0 59 188-246 364-446 (454)
236 PTZ00472 serine carboxypeptida 91.3 0.86 1.9E-05 38.3 6.8 98 30-140 74-192 (462)
237 PLN02213 sinapoylglucose-malat 91.3 0.61 1.3E-05 37.1 5.6 63 187-250 233-315 (319)
238 KOG2182 Hydrolytic enzymes of 91.1 1.2 2.7E-05 37.0 7.1 113 31-165 84-207 (514)
239 PF09994 DUF2235: Uncharacteri 90.5 3.7 8E-05 31.9 9.2 40 101-140 73-113 (277)
240 PLN02209 serine carboxypeptida 90.2 0.95 2.1E-05 37.7 6.0 42 99-140 145-188 (437)
241 KOG4389 Acetylcholinesterase/B 90.1 2 4.2E-05 35.9 7.4 95 31-134 133-233 (601)
242 KOG4372 Predicted alpha/beta h 89.5 0.85 1.9E-05 36.9 5.0 39 30-68 77-118 (405)
243 PF09370 TIM-br_sig_trns: TIM- 89.0 0.45 9.7E-06 36.1 3.0 118 104-231 3-120 (268)
244 PLN03016 sinapoylglucose-malat 88.3 1.5 3.3E-05 36.4 6.0 42 99-140 143-186 (433)
245 PF10605 3HBOH: 3HB-oligomer h 87.2 1.6 3.5E-05 37.3 5.4 46 187-232 555-603 (690)
246 PLN02213 sinapoylglucose-malat 85.4 9.6 0.00021 30.4 8.8 66 100-166 30-97 (319)
247 PF06441 EHN: Epoxide hydrolas 85.2 1.2 2.6E-05 29.3 3.0 26 26-51 85-110 (112)
248 KOG1282 Serine carboxypeptidas 85.1 2.4 5.1E-05 35.4 5.3 45 96-140 143-189 (454)
249 KOG2029 Uncharacterized conser 83.8 7.4 0.00016 33.5 7.6 40 101-140 506-547 (697)
250 PF06309 Torsin: Torsin; Inte 83.6 0.88 1.9E-05 30.5 1.9 27 30-56 49-77 (127)
251 KOG2385 Uncharacterized conser 82.9 10 0.00022 32.1 7.9 61 103-169 430-491 (633)
252 COG0529 CysC Adenylylsulfate k 82.7 5.2 0.00011 28.7 5.4 45 31-75 20-66 (197)
253 KOG1283 Serine carboxypeptidas 80.7 20 0.00043 28.5 8.3 119 31-166 29-167 (414)
254 cd03557 L-arabinose_isomerase 77.9 43 0.00094 28.6 12.2 130 97-248 17-161 (484)
255 PF02610 Arabinose_Isome: L-ar 77.0 38 0.00081 27.4 10.4 85 152-249 70-168 (359)
256 COG4553 DepA Poly-beta-hydroxy 76.1 36 0.00078 26.8 13.3 66 186-251 338-410 (415)
257 PF05576 Peptidase_S37: PS-10 74.5 3.8 8.1E-05 33.6 3.2 104 31-161 61-165 (448)
258 PF07519 Tannase: Tannase and 72.6 17 0.00037 30.8 6.8 38 118-166 114-151 (474)
259 COG4822 CbiK Cobalamin biosynt 64.8 56 0.0012 24.4 11.4 132 98-251 117-259 (265)
260 KOG2170 ATPase of the AAA+ sup 64.5 5.3 0.00011 31.3 2.0 22 30-51 106-127 (344)
261 PF04378 RsmJ: Ribosomal RNA s 64.3 63 0.0014 24.7 8.4 116 120-253 104-236 (245)
262 PF06500 DUF1100: Alpha/beta h 63.5 11 0.00024 31.1 3.7 61 186-248 188-255 (411)
263 PF05576 Peptidase_S37: PS-10 62.0 10 0.00022 31.2 3.3 58 185-249 349-411 (448)
264 KOG0256 1-aminocyclopropane-1- 60.2 1E+02 0.0022 25.7 11.4 123 101-247 126-257 (471)
265 PRK12467 peptide synthase; Pro 58.9 43 0.00093 36.9 7.8 88 32-140 3691-3778(3956)
266 PRK02929 L-arabinose isomerase 58.7 1.2E+02 0.0026 26.1 12.5 84 152-248 70-167 (499)
267 PF10081 Abhydrolase_9: Alpha/ 58.3 20 0.00042 28.0 4.1 92 51-163 52-145 (289)
268 COG2961 ComJ Protein involved 52.2 1.1E+02 0.0023 23.6 9.4 96 153-252 154-266 (279)
269 PF01674 Lipase_2: Lipase (cla 51.3 59 0.0013 24.4 5.6 64 187-253 1-74 (219)
270 PF10561 UPF0565: Uncharacteri 50.2 76 0.0016 25.2 6.2 22 119-140 193-214 (303)
271 PF08250 Sperm_act_pep: Sperm- 49.7 4.4 9.6E-05 14.0 -0.2 6 125-130 1-6 (10)
272 COG1448 TyrB Aspartate/tyrosin 49.3 1E+02 0.0022 25.3 6.8 19 122-140 95-113 (396)
273 COG0505 CarA Carbamoylphosphat 49.0 32 0.00069 27.8 4.0 76 50-136 191-266 (368)
274 COG4822 CbiK Cobalamin biosynt 48.1 46 0.001 24.8 4.4 40 27-66 132-173 (265)
275 PF12242 Eno-Rase_NADH_b: NAD( 47.6 46 0.001 20.2 3.6 42 99-140 17-61 (78)
276 PF14253 AbiH: Bacteriophage a 47.2 23 0.00049 27.3 3.1 14 118-131 234-247 (270)
277 COG0536 Obg Predicted GTPase [ 46.5 1.2E+02 0.0026 24.6 6.7 117 122-248 217-335 (369)
278 PF03610 EIIA-man: PTS system 43.7 91 0.002 20.4 5.1 76 35-139 2-78 (116)
279 COG4425 Predicted membrane pro 43.1 45 0.00098 28.0 4.1 34 102-135 378-413 (588)
280 COG0331 FabD (acyl-carrier-pro 42.7 43 0.00094 26.7 4.0 22 117-138 83-104 (310)
281 TIGR02873 spore_ylxY probable 42.2 12 0.00026 29.0 0.8 34 34-67 231-264 (268)
282 PF14226 DIOX_N: non-haem diox 41.3 68 0.0015 20.8 4.3 42 203-251 14-55 (116)
283 COG1647 Esterase/lipase [Gener 40.8 1.2E+02 0.0027 22.9 5.7 56 187-248 15-72 (243)
284 PF01583 APS_kinase: Adenylyls 40.6 18 0.00039 25.4 1.4 37 33-69 1-39 (156)
285 TIGR03709 PPK2_rel_1 polyphosp 39.2 1.7E+02 0.0037 22.8 6.6 38 32-69 54-93 (264)
286 PLN02606 palmitoyl-protein thi 38.8 2E+02 0.0044 22.9 6.9 39 186-226 25-64 (306)
287 TIGR02764 spore_ybaN_pdaB poly 38.4 9.9 0.00021 27.6 -0.1 33 34-66 152-187 (191)
288 PF06792 UPF0261: Uncharacteri 37.4 2E+02 0.0044 24.0 7.0 97 41-141 8-117 (403)
289 cd07212 Pat_PNPLA9 Patatin-lik 36.8 62 0.0013 25.8 4.1 18 122-139 35-52 (312)
290 TIGR00128 fabD malonyl CoA-acy 36.4 46 0.00099 25.9 3.3 20 119-138 83-102 (290)
291 cd07224 Pat_like Patatin-like 36.3 55 0.0012 24.8 3.6 21 120-140 30-50 (233)
292 TIGR02884 spore_pdaA delta-lac 34.6 18 0.0004 27.1 0.8 34 34-67 187-221 (224)
293 PF00698 Acyl_transf_1: Acyl t 34.3 37 0.00081 27.0 2.5 19 119-137 84-102 (318)
294 TIGR03131 malonate_mdcH malona 34.1 56 0.0012 25.6 3.5 20 119-138 76-95 (295)
295 cd07207 Pat_ExoU_VipD_like Exo 33.8 34 0.00074 24.7 2.1 19 121-139 29-47 (194)
296 TIGR03707 PPK2_P_aer polyphosp 32.3 2.3E+02 0.0049 21.6 6.8 38 32-69 29-68 (230)
297 KOG0781 Signal recognition par 31.3 1.9E+02 0.0042 24.8 6.0 92 40-160 445-537 (587)
298 TIGR03100 hydr1_PEP hydrolase, 30.4 2.6E+02 0.0056 21.6 6.8 41 187-228 26-67 (274)
299 cd00006 PTS_IIA_man PTS_IIA, P 30.3 1.7E+02 0.0036 19.4 5.3 74 35-137 3-76 (122)
300 cd07198 Patatin Patatin-like p 30.2 46 0.00099 23.6 2.2 20 120-139 27-46 (172)
301 PF03976 PPK2: Polyphosphate k 30.1 65 0.0014 24.4 3.0 38 32-69 29-68 (228)
302 smart00827 PKS_AT Acyl transfe 29.4 43 0.00093 26.2 2.1 19 120-138 83-101 (298)
303 PF12694 MoCo_carrier: Putativ 29.2 2E+02 0.0044 20.0 6.0 59 183-249 86-144 (145)
304 cd00578 L-fuc_L-ara-isomerases 28.7 3.6E+02 0.0079 22.8 8.5 81 154-247 63-151 (452)
305 TIGR02690 resist_ArsH arsenica 28.4 2.1E+02 0.0045 21.6 5.4 37 33-69 26-66 (219)
306 COG3727 Vsr DNA G:T-mismatch r 28.2 67 0.0015 21.8 2.5 14 53-66 101-114 (150)
307 cd07225 Pat_PNPLA6_PNPLA7 Pata 28.2 50 0.0011 26.2 2.3 19 121-139 45-63 (306)
308 cd07228 Pat_NTE_like_bacteria 28.0 51 0.0011 23.5 2.1 20 120-139 29-48 (175)
309 cd06259 YdcF-like YdcF-like. Y 27.7 2E+02 0.0044 19.6 5.7 32 187-218 34-65 (150)
310 COG0431 Predicted flavoprotein 27.4 1.7E+02 0.0037 21.2 4.7 36 105-140 86-122 (184)
311 PF02606 LpxK: Tetraacyldisacc 26.9 2.5E+02 0.0053 22.7 5.9 51 186-244 226-276 (326)
312 cd07209 Pat_hypo_Ecoli_Z1214_l 26.6 57 0.0012 24.3 2.2 21 120-140 27-47 (215)
313 PF01734 Patatin: Patatin-like 26.5 65 0.0014 22.8 2.6 20 120-139 28-47 (204)
314 cd07227 Pat_Fungal_NTE1 Fungal 26.4 56 0.0012 25.4 2.2 19 121-139 40-58 (269)
315 PF05577 Peptidase_S28: Serine 26.2 94 0.002 26.0 3.7 39 186-232 375-413 (434)
316 PTZ00445 p36-lilke protein; Pr 25.8 1.2E+02 0.0026 22.8 3.6 24 50-73 32-55 (219)
317 KOG0635 Adenosine 5'-phosphosu 25.7 2E+02 0.0044 20.3 4.5 44 32-75 29-74 (207)
318 TIGR02816 pfaB_fam PfaB family 25.1 75 0.0016 27.6 2.9 20 119-138 265-284 (538)
319 cd07211 Pat_PNPLA8 Patatin-lik 25.1 1E+02 0.0023 24.4 3.6 17 122-138 44-60 (308)
320 PLN02752 [acyl-carrier protein 24.9 53 0.0011 26.5 1.9 18 121-138 126-143 (343)
321 cd07208 Pat_hypo_Ecoli_yjju_li 24.6 69 0.0015 24.7 2.5 19 122-140 30-48 (266)
322 COG2845 Uncharacterized protei 24.5 2E+02 0.0044 23.1 4.8 24 116-139 114-137 (354)
323 COG1506 DAP2 Dipeptidyl aminop 24.1 1.4E+02 0.003 26.6 4.4 42 31-72 549-593 (620)
324 PTZ00397 macrophage migration 24.1 1.8E+02 0.0039 19.0 4.0 13 238-250 78-90 (116)
325 PRK10834 vancomycin high tempe 24.0 1.6E+02 0.0034 22.5 4.1 48 184-233 78-125 (239)
326 PF02698 DUF218: DUF218 domain 23.9 1.7E+02 0.0037 20.1 4.2 27 203-231 83-109 (155)
327 PLN02607 1-aminocyclopropane-1 23.9 4.5E+02 0.0098 22.3 10.5 28 220-247 200-231 (447)
328 cd07205 Pat_PNPLA6_PNPLA7_NTE1 23.8 75 0.0016 22.5 2.4 20 120-139 29-48 (175)
329 PRK14581 hmsF outer membrane N 23.6 67 0.0015 28.7 2.4 37 31-67 46-92 (672)
330 PF09757 Arb2: Arb2 domain; I 23.5 27 0.00058 25.1 0.0 39 31-69 97-148 (178)
331 PF11713 Peptidase_C80: Peptid 23.2 88 0.0019 22.1 2.5 34 98-131 79-116 (157)
332 PRK10279 hypothetical protein; 23.1 1.6E+02 0.0035 23.4 4.2 20 120-139 34-53 (300)
333 PRK10673 acyl-CoA esterase; Pr 23.0 3.2E+02 0.007 20.3 6.6 40 186-232 15-54 (255)
334 COG0426 FpaA Uncharacterized f 22.9 4.2E+02 0.0091 22.1 6.5 34 35-68 250-283 (388)
335 PF14714 KH_dom-like: KH-domai 22.6 1.7E+02 0.0038 17.8 3.4 31 185-215 36-66 (80)
336 COG4635 HemG Flavodoxin [Energ 22.6 1.6E+02 0.0034 21.0 3.5 37 189-227 2-38 (175)
337 cd07213 Pat17_PNPLA8_PNPLA9_li 22.3 75 0.0016 24.9 2.3 18 122-139 37-54 (288)
338 cd07210 Pat_hypo_W_succinogene 22.2 75 0.0016 23.8 2.2 19 121-139 30-48 (221)
339 COG2201 CheB Chemotaxis respon 22.2 1.7E+02 0.0037 23.8 4.2 21 119-139 157-177 (350)
340 PLN02376 1-aminocyclopropane-1 21.6 5.3E+02 0.011 22.3 13.1 28 220-247 199-230 (496)
341 PF10137 TIR-like: Predicted n 21.5 2.3E+02 0.005 19.1 4.1 8 190-197 2-9 (125)
342 cd07230 Pat_TGL4-5_like Triacy 21.5 1.6E+02 0.0035 24.7 4.1 33 106-140 90-122 (421)
343 PLN02216 protein SRG1 21.3 3.3E+02 0.0072 22.2 5.8 58 187-251 52-109 (357)
344 cd07217 Pat17_PNPLA8_PNPLA9_li 21.2 81 0.0018 25.6 2.3 17 122-138 44-60 (344)
345 cd01819 Patatin_and_cPLA2 Pata 21.1 2E+02 0.0043 20.0 4.0 18 120-137 29-46 (155)
346 cd05397 NT_Pol-beta-like Nucle 21.0 1.5E+02 0.0033 15.8 2.7 21 105-125 4-24 (49)
347 KOG4287 Pectin acetylesterase 20.9 48 0.001 26.8 0.9 21 179-199 261-281 (402)
348 KOG1202 Animal-type fatty acid 20.9 8.6E+02 0.019 24.4 8.5 58 191-251 649-713 (2376)
349 COG0552 FtsY Signal recognitio 20.9 2.7E+02 0.0059 22.6 4.9 36 31-66 136-173 (340)
350 KOG4150 Predicted ATP-dependen 20.3 4.7E+02 0.01 23.3 6.4 65 185-250 896-965 (1034)
351 PF14606 Lipase_GDSL_3: GDSL-l 20.3 99 0.0022 22.4 2.3 28 98-125 73-100 (178)
No 1
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.98 E-value=2.8e-31 Score=197.20 Aligned_cols=207 Identities=38% Similarity=0.716 Sum_probs=146.6
Q ss_pred eeecCCCCCceEEEEEccCCCCCCchHHHhh-hcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH
Q 025236 24 HVVRPKGKHQATIVWLHGLSDKGSSWSQLLE-TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD 102 (256)
Q Consensus 24 ~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~-~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (256)
.+..+.++..++||++||+|++...+..... .+......+++++.+........|.....||+..........+.+++.
T Consensus 5 ~i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 5 RIIEPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp EEE--SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred EEeCCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 4567778889999999999999977776666 455678999999887655555566666799998766655545566777
Q ss_pred HHHHHHHHHHhc----CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCC
Q 025236 103 ASAAHVANLLST----EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGS 178 (256)
Q Consensus 103 ~~~~~l~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 178 (256)
+.++.+.+++.. ..+.++|+|+|+|+||.+|+.++.+. +..++++++++|+++.........
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~-----------p~~~~gvv~lsG~~~~~~~~~~~~--- 150 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRY-----------PEPLAGVVALSGYLPPESELEDRP--- 150 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCT-----------SSTSSEEEEES---TTGCCCHCCH---
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHc-----------CcCcCEEEEeeccccccccccccc---
Confidence 777766666543 35667999999999999999999954 889999999999998765433221
Q ss_pred hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 179 REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 179 ~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
....++|++++||++|+++|.+.++...+.|++.+. +++++.|+|.||.+..++++.+.+||++++
T Consensus 151 ----~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~-~v~~~~~~g~gH~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 151 ----EALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA-NVEFHEYPGGGHEISPEELRDLREFLEKHI 216 (216)
T ss_dssp ----CCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT--GEEEEEETT-SSS--HHHHHHHHHHHHHH-
T ss_pred ----cccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCC-CEEEEEcCCCCCCCCHHHHHHHHHHHhhhC
Confidence 122378999999999999999999999999999998 999999999999999999999999999864
No 2
>PRK11460 putative hydrolase; Provisional
Probab=99.96 E-value=3.3e-27 Score=176.68 Aligned_cols=195 Identities=20% Similarity=0.270 Sum_probs=143.2
Q ss_pred cCCCCCceEEEEEccCCCCCCchHHHhhhcCCCC--eEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 27 RPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPN--IKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g--~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
++..++.|+||++||+|++...|..+++.|...+ +.++.++.+.. ......+.|++....... ...+++.+.
T Consensus 10 ~~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~----~~~~~g~~W~~~~~~~~~--~~~~~~~~~ 83 (232)
T PRK11460 10 SPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEP----SGNGAGRQWFSVQGITED--NRQARVAAI 83 (232)
T ss_pred CCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCC----cCCCCCcccccCCCCCcc--chHHHHHHH
Confidence 4456678899999999999999999999987544 56666655421 112234688876433221 122333343
Q ss_pred HHHHHHHH----hc-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCCh
Q 025236 105 AAHVANLL----ST-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSR 179 (256)
Q Consensus 105 ~~~l~~~~----~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 179 (256)
+..+.+.+ .. ..+.++|+|+|||+||.+++.++.+. +..+.+++++++.++...
T Consensus 84 ~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----------~~~~~~vv~~sg~~~~~~---------- 142 (232)
T PRK11460 84 MPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----------PGLAGRVIAFSGRYASLP---------- 142 (232)
T ss_pred HHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----------CCcceEEEEecccccccc----------
Confidence 33333322 22 23446899999999999999988754 667778888888764211
Q ss_pred HHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHhhh
Q 025236 180 EATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLEL 251 (256)
Q Consensus 180 ~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 251 (256)
......+|++++||++|+++|++.++++.+.+++.+. +++++++++++|.+..+.++.+.+||.+.+..
T Consensus 143 --~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~-~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 143 --ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG-DVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred --ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC-CeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 0123478999999999999999999999999999887 89999999999999999999999999998853
No 3
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=2.3e-26 Score=169.84 Aligned_cols=201 Identities=16% Similarity=0.199 Sum_probs=142.9
Q ss_pred ccccccceeecCC-CCCceEEEEEccCCCCC-CchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCC
Q 025236 17 PFEFGRTHVVRPK-GKHQATIVWLHGLSDKG-SSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDG 94 (256)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (256)
+..+-.....+.. .+++..|+++||++... ..|..++..|+..||.|+++|++|||.+. |...
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd--Gl~~------------- 101 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSD--GLHA------------- 101 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCC--CCcc-------------
Confidence 3333333333323 37888999999999875 67888999999999999999999998665 2211
Q ss_pred CCCcccHHHHHHHHHHHHh-----cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch
Q 025236 95 PDDLEGLDASAAHVANLLS-----TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR 169 (256)
Q Consensus 95 ~~~~~~~~~~~~~l~~~~~-----~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 169 (256)
...++...++.+.+++. ......+.+|+||||||.+++.++.+. |..++|+|++++.....+
T Consensus 102 --yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----------p~~w~G~ilvaPmc~i~~ 168 (313)
T KOG1455|consen 102 --YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-----------PNFWDGAILVAPMCKISE 168 (313)
T ss_pred --cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-----------CcccccceeeecccccCC
Confidence 12334444444443332 345567999999999999999999965 788888888877532100
Q ss_pred h-----------------------------h---------hhhcc----------------------CChHHHhhcCCCC
Q 025236 170 T-----------------------------L---------KSRME----------------------GSREATRRAASLP 189 (256)
Q Consensus 170 ~-----------------------------~---------~~~~~----------------------~~~~~~~~~~~~p 189 (256)
. . ..... .........+++|
T Consensus 169 ~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP 248 (313)
T KOG1455|consen 169 DTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP 248 (313)
T ss_pred ccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc
Confidence 0 0 00000 0011134567899
Q ss_pred EEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--------hHHHHHHHHHHHHH
Q 025236 190 ILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--------PEEMDEVRNWLTAR 248 (256)
Q Consensus 190 ~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--------~~~~~~~~~~l~~~ 248 (256)
.+++||++|.++.++.++.+++.... .++++.+|||+-|... ..++.+|++||.++
T Consensus 249 flilHG~dD~VTDp~~Sk~Lye~A~S---~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 249 FLILHGTDDKVTDPKVSKELYEKASS---SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEEecCCCcccCcHHHHHHHHhccC---CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999887 5789999999999865 22468899999875
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=1.8e-25 Score=172.86 Aligned_cols=190 Identities=16% Similarity=0.224 Sum_probs=133.7
Q ss_pred cCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 27 RPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
.|...++++|+++||++.+...|..+++.|+..||.|+++|++|+|.+.... ...+++...++
T Consensus 19 ~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-----------------~~~~~~~~~~~ 81 (276)
T PHA02857 19 KPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-----------------MMIDDFGVYVR 81 (276)
T ss_pred cCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-----------------CCcCCHHHHHH
Confidence 4545667899999999999999999999999889999999999987653211 01122333333
Q ss_pred HHHHHH---hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh-------------
Q 025236 107 HVANLL---STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT------------- 170 (256)
Q Consensus 107 ~l~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------------- 170 (256)
++.+.+ .......+++|+||||||.+++.++.+. |+.++++|++++.......
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~-----------p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~ 150 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN-----------PNLFTAMILMSPLVNAEAVPRLNLLAAKLMGI 150 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC-----------ccccceEEEeccccccccccHHHHHHHHHHHH
Confidence 333332 2223445899999999999999999854 7778898888875321100
Q ss_pred h-h---------hhc------------cC-------C-------------hHHHhhcCCCCEEEeecCCCccccchhhHH
Q 025236 171 L-K---------SRM------------EG-------S-------------REATRRAASLPILLCHGSGDDVVAYKHGER 208 (256)
Q Consensus 171 ~-~---------~~~------------~~-------~-------------~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~ 208 (256)
. . ... .. . ........++|+|+++|++|.++|++.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~ 230 (276)
T PHA02857 151 FYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYY 230 (276)
T ss_pred hCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHH
Confidence 0 0 000 00 0 001223578999999999999999999999
Q ss_pred HHHHHhhcCCcceEEEEeCCCCCcCChH-------HHHHHHHHHHHH
Q 025236 209 SAQTLNSVGFRDLTFRCYNGVGHYTVPE-------EMDEVRNWLTAR 248 (256)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~ 248 (256)
+.+.+.. +++++++++++|.+..| .++++.+||.++
T Consensus 231 l~~~~~~----~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 231 FMQHANC----NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHccC----CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9888753 58999999999987622 457788888775
No 5
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=2.4e-25 Score=156.26 Aligned_cols=198 Identities=50% Similarity=0.928 Sum_probs=171.4
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
...+|||+||.|.++..|..+.+.+..++...++|..+.++++..+|...+.||+......+...+.+++..+.+.+.++
T Consensus 2 h~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred ceEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999888888877888888888888888
Q ss_pred HhcC----CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCC
Q 025236 112 LSTE----PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAAS 187 (256)
Q Consensus 112 ~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (256)
++.+ .+.++|++.|+||||.+++..+.. ++..+.+++..+++++........... ....
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~-----------~~~~l~G~~~~s~~~p~~~~~~~~~~~------~~~~ 144 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALT-----------YPKALGGIFALSGFLPRASIGLPGWLP------GVNY 144 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhc-----------cccccceeeccccccccchhhccCCcc------ccCc
Confidence 7654 344689999999999999999984 478899999999998844322222111 1117
Q ss_pred CCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHH
Q 025236 188 LPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTA 247 (256)
Q Consensus 188 ~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 247 (256)
+|++..||+.|++||..-.+...+.++..+. .++++.|+|.+|...+++++++..|+.+
T Consensus 145 ~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~-~~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 145 TPILLCHGTADPLVPFRFGEKSAQFLKSLGV-RVTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred chhheecccCCceeehHHHHHHHHHHHHcCC-ceeeeecCCccccccHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998 6999999999999999999999999987
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=99.94 E-value=5.2e-25 Score=167.03 Aligned_cols=189 Identities=14% Similarity=0.119 Sum_probs=129.9
Q ss_pred CCccccccceeecC--CCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCC-CCcccCCCccccccccCCCC
Q 025236 15 RRPFEFGRTHVVRP--KGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTR-PVAIFGGYPCTAWFDVGDLS 91 (256)
Q Consensus 15 ~~~~~~~~~~~~~~--~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~-~~~~~~~~~~~~~~~~~~~~ 91 (256)
..+..+...+..+. ..++.++||++||++.+...+..+++.|++.||.|+.+|++++ |.+. |. +.+ ..
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~--G~----~~~---~t 87 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSS--GT----IDE---FT 87 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCC--Cc----ccc---Cc
Confidence 33455555555554 2356789999999999887799999999999999999999876 5442 21 000 00
Q ss_pred CCCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh
Q 025236 92 EDGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL 171 (256)
Q Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 171 (256)
......|+..+++++.+ . ...+|+|+||||||.+++.+|. ...++++|..+|+....+.+
T Consensus 88 --~s~g~~Dl~aaid~lk~----~-~~~~I~LiG~SmGgava~~~A~-------------~~~v~~lI~~sp~~~l~d~l 147 (307)
T PRK13604 88 --MSIGKNSLLTVVDWLNT----R-GINNLGLIAASLSARIAYEVIN-------------EIDLSFLITAVGVVNLRDTL 147 (307)
T ss_pred --ccccHHHHHHHHHHHHh----c-CCCceEEEEECHHHHHHHHHhc-------------CCCCCEEEEcCCcccHHHHH
Confidence 00113344444445433 2 2348999999999999877765 23488888888876633211
Q ss_pred hhhcc---------------------------------CChH------HHhhcCCCCEEEeecCCCccccchhhHHHHHH
Q 025236 172 KSRME---------------------------------GSRE------ATRRAASLPILLCHGSGDDVVAYKHGERSAQT 212 (256)
Q Consensus 172 ~~~~~---------------------------------~~~~------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~ 212 (256)
..... .... ......+.|+|++||++|.+||++.++++++.
T Consensus 148 ~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~ 227 (307)
T PRK13604 148 ERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDS 227 (307)
T ss_pred HHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHH
Confidence 10000 0001 22344679999999999999999999999999
Q ss_pred HhhcCCcceEEEEeCCCCCcCCh
Q 025236 213 LNSVGFRDLTFRCYNGVGHYTVP 235 (256)
Q Consensus 213 l~~~~~~~~~~~~~~g~~H~~~~ 235 (256)
++. .+++++++||++|.+.+
T Consensus 228 ~~s---~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 228 IRS---EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred hcc---CCcEEEEeCCCccccCc
Confidence 864 37999999999998764
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=5.3e-25 Score=175.35 Aligned_cols=196 Identities=16% Similarity=0.183 Sum_probs=131.3
Q ss_pred cCCCCCceEEEEEccCCCCCCc-hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 27 RPKGKHQATIVWLHGLSDKGSS-WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~-~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
++.++++++|||+||++.+... |..+++.|++.||.|+++|++|+|.+.... . .....+++.+++
T Consensus 81 p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~----~----------~~~~~~~~~~dv 146 (349)
T PLN02385 81 PENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH----G----------YIPSFDDLVDDV 146 (349)
T ss_pred cCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC----C----------CcCCHHHHHHHH
Confidence 3344678999999999988765 578889998889999999999987543110 0 001223333333
Q ss_pred HHHHHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch--------------
Q 025236 106 AHVANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR-------------- 169 (256)
Q Consensus 106 ~~l~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------------- 169 (256)
..+.+.+.. ..+..+++|+||||||.+++.++.+. |..++++|++++......
T Consensus 147 ~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~-----------p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 147 IEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ-----------PNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred HHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhC-----------cchhhheeEecccccccccccCchHHHHHHHH
Confidence 333332322 22345899999999999999999865 667777777765321000
Q ss_pred --------------hhhh------------h-----ccC---------------ChHHHhhcCCCCEEEeecCCCccccc
Q 025236 170 --------------TLKS------------R-----MEG---------------SREATRRAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 170 --------------~~~~------------~-----~~~---------------~~~~~~~~~~~p~l~~~G~~D~~~~~ 203 (256)
.+.. . ... ........+++|+|+++|++|.++|.
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 0000 0 000 00011235689999999999999999
Q ss_pred hhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh---H-----HHHHHHHHHHHHhh
Q 025236 204 KHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP---E-----EMDEVRNWLTARLE 250 (256)
Q Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~---~-----~~~~~~~~l~~~l~ 250 (256)
+.++.+++.+.. ++++++++++++|.... + .++.+.+||.+++.
T Consensus 296 ~~~~~l~~~~~~---~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASS---SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCC---CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 999999888753 35799999999998762 2 45778899988764
No 8
>PRK10566 esterase; Provisional
Probab=99.94 E-value=9.2e-25 Score=166.36 Aligned_cols=197 Identities=25% Similarity=0.366 Sum_probs=129.7
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCC--ccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGY--PCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
++.|+||++||++++...|..+++.|++.||.|+++|++++|.+..+.. ....|++. ....+.+ +..+
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~ 94 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQI---------LLQNMQE-FPTL 94 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHH---------HHHHHHH-HHHH
Confidence 3578999999999998889999999998999999999998775321110 00011000 0011111 2222
Q ss_pred HHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEe--ccCCCcc-hh-------------
Q 025236 109 ANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGL--SGWLPCS-RT------------- 170 (256)
Q Consensus 109 ~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~-~~------------- 170 (256)
.+.+... .+.++++++|||+||.+++.++.+. +. +.+.+.+ ++++... ..
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARH-----------PW-VKCVASLMGSGYFTSLARTLFPPLIPETAAQQ 162 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhC-----------CC-eeEEEEeeCcHHHHHHHHHhcccccccccccH
Confidence 2333222 3456999999999999999998753 33 3333322 2221100 00
Q ss_pred --hhh---hcc-CChHHHhhc-CCCCEEEeecCCCccccchhhHHHHHHHhhcCCc-ceEEEEeCCCCCcCChHHHHHHH
Q 025236 171 --LKS---RME-GSREATRRA-ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFR-DLTFRCYNGVGHYTVPEEMDEVR 242 (256)
Q Consensus 171 --~~~---~~~-~~~~~~~~~-~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~g~~H~~~~~~~~~~~ 242 (256)
+.. ... ......... .+.|+|++||++|.++|++.++.+.+.+++.|.+ +++++.++|++|.+.++.++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~ 242 (249)
T PRK10566 163 AEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRITPEALDAGV 242 (249)
T ss_pred HHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccCHHHHHHHH
Confidence 000 000 000111223 3689999999999999999999999999987763 47889999999999999999999
Q ss_pred HHHHHHh
Q 025236 243 NWLTARL 249 (256)
Q Consensus 243 ~~l~~~l 249 (256)
+||++++
T Consensus 243 ~fl~~~~ 249 (249)
T PRK10566 243 AFFRQHL 249 (249)
T ss_pred HHHHhhC
Confidence 9999764
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=7.8e-24 Score=167.63 Aligned_cols=193 Identities=18% Similarity=0.158 Sum_probs=131.3
Q ss_pred CCceEEEEEccCCCCCC-chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGS-SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
.++++||++||++.+.. .|..++..|+..||+|+++|+||+|.+.. . .. .....+.+.+++..+.
T Consensus 57 ~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~--~--~~----------~~~~~~~~~~D~~~~i 122 (330)
T PLN02298 57 PPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEG--L--RA----------YVPNVDLVVEDCLSFF 122 (330)
T ss_pred CCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCC--c--cc----------cCCCHHHHHHHHHHHH
Confidence 46789999999986643 46677888988899999999999876531 1 00 0112333444444444
Q ss_pred HHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch-------------hhhh-
Q 025236 110 NLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR-------------TLKS- 173 (256)
Q Consensus 110 ~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------------~~~~- 173 (256)
+.+... ....+++|+||||||.+++.++.+. |..++++|+++++..... ....
T Consensus 123 ~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PLN02298 123 NSVKQREEFQGLPRFLYGESMGGAICLLIHLAN-----------PEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARF 191 (330)
T ss_pred HHHHhcccCCCCCEEEEEecchhHHHHHHHhcC-----------cccceeEEEecccccCCcccCCchHHHHHHHHHHHH
Confidence 444332 2334899999999999999998854 777888888876531100 0000
Q ss_pred -----------hc--------------------cCC---------------hHHHhhcCCCCEEEeecCCCccccchhhH
Q 025236 174 -----------RM--------------------EGS---------------REATRRAASLPILLCHGSGDDVVAYKHGE 207 (256)
Q Consensus 174 -----------~~--------------------~~~---------------~~~~~~~~~~p~l~~~G~~D~~~~~~~~~ 207 (256)
.. ... ........++|+|++||++|.++|++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~ 271 (330)
T PLN02298 192 LPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSR 271 (330)
T ss_pred CCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHH
Confidence 00 000 00112356799999999999999999999
Q ss_pred HHHHHHhhcCCcceEEEEeCCCCCcCCh--------HHHHHHHHHHHHHhhh
Q 025236 208 RSAQTLNSVGFRDLTFRCYNGVGHYTVP--------EEMDEVRNWLTARLEL 251 (256)
Q Consensus 208 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~--------~~~~~~~~~l~~~l~~ 251 (256)
.+++.+.. ++.++++++|++|.+.. ...+.+.+||.+.+..
T Consensus 272 ~l~~~i~~---~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 272 ALYEEAKS---EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHHHHhcc---CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 99888854 36799999999999651 2356788899888754
No 10
>PRK10749 lysophospholipase L2; Provisional
Probab=99.93 E-value=3.3e-24 Score=169.41 Aligned_cols=197 Identities=13% Similarity=0.002 Sum_probs=131.7
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
.++++||++||++.+...|..++..+.+.||.|+++|++|+|.+...... .........+++.+++..+.+
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~---------~~~~~~~~~~~~~~d~~~~~~ 122 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDD---------PHRGHVERFNDYVDDLAAFWQ 122 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCC---------CCcCccccHHHHHHHHHHHHH
Confidence 45679999999999888899999888889999999999998765321000 000001123333333333333
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc----hh----------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS----RT---------------- 170 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~---------------- 170 (256)
.+....+..+++++||||||.+++.++.+. +..++++|++++..... ..
T Consensus 123 ~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~-----------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PRK10749 123 QEIQPGPYRKRYALAHSMGGAILTLFLQRH-----------PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIR 191 (330)
T ss_pred HHHhcCCCCCeEEEEEcHHHHHHHHHHHhC-----------CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCC
Confidence 332233446899999999999999999865 67788888777643110 00
Q ss_pred -----------------------------hhhhccCCh----------------------HHHhhcCCCCEEEeecCCCc
Q 025236 171 -----------------------------LKSRMEGSR----------------------EATRRAASLPILLCHGSGDD 199 (256)
Q Consensus 171 -----------------------------~~~~~~~~~----------------------~~~~~~~~~p~l~~~G~~D~ 199 (256)
....+...+ .......++|+|+++|++|.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~ 271 (330)
T PRK10749 192 DGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEER 271 (330)
T ss_pred CcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCe
Confidence 000000000 01123568999999999999
Q ss_pred cccchhhHHHHHHHhhcCC--cceEEEEeCCCCCcCChH-------HHHHHHHHHHH
Q 025236 200 VVAYKHGERSAQTLNSVGF--RDLTFRCYNGVGHYTVPE-------EMDEVRNWLTA 247 (256)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~ 247 (256)
+++++.++.+++.+++.+. +++++++++|++|.+..| .++.+.+||++
T Consensus 272 vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 272 VVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred eeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 9999999999999876543 256899999999986622 34667777765
No 11
>COG0400 Predicted esterase [General function prediction only]
Probab=99.93 E-value=4.2e-24 Score=154.27 Aligned_cols=190 Identities=31% Similarity=0.452 Sum_probs=146.7
Q ss_pred cCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 27 RPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
.+.++..|+||++||.|++..++.++.+.+. .+..++.+..+.. ..++.+...|++...+ +.+++.....
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~rG~v~---~~g~~~~f~~~~~~~~------d~edl~~~~~ 81 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSPRGPVA---ENGGPRFFRRYDEGSF------DQEDLDLETE 81 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcCCCCcc---ccCcccceeecCCCcc------chhhHHHHHH
Confidence 4455667899999999999999888666665 6788888855432 3344444455444322 2444544444
Q ss_pred HHHHHHh----c-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHH
Q 025236 107 HVANLLS----T-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREA 181 (256)
Q Consensus 107 ~l~~~~~----~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 181 (256)
.+.+.+. + ..+.++++++|+|.|+.+++.+..+. +..++++++++|.++.....
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~-----------~~~~~~ail~~g~~~~~~~~---------- 140 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL-----------PGLFAGAILFSGMLPLEPEL---------- 140 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC-----------chhhccchhcCCcCCCCCcc----------
Confidence 4444433 2 34557999999999999999999965 88999999999998876431
Q ss_pred HhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 182 TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 182 ~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
......+|++++||+.|+++|...+.++.+.+++.|. +++...++ .||.+..+.++.+.+|+...+
T Consensus 141 ~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~-~v~~~~~~-~GH~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 141 LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGA-DVEVRWHE-GGHEIPPEELEAARSWLANTL 206 (207)
T ss_pred ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC-CEEEEEec-CCCcCCHHHHHHHHHHHHhcc
Confidence 2245678999999999999999999999999999998 99999999 699999999999999998754
No 12
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=2.1e-23 Score=166.93 Aligned_cols=197 Identities=17% Similarity=0.209 Sum_probs=137.2
Q ss_pred CCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 29 KGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 29 ~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
.++++++||++||++.+...|..+++.|++.||.|+++|++|+|.+.... ....+.+.+.+++..+
T Consensus 132 ~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~--------------~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 132 AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH--------------GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------CCCcCHHHHHHHHHHH
Confidence 35567899999999998888999999999899999999999987543110 0011233444555555
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch-------------------
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR------------------- 169 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------------- 169 (256)
.+.+....+..+++++||||||.+++.++.+. ..+..++++|+.++++....
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p---------~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAASYP---------SIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHhcc---------CcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 55555444445899999999999999876521 11346788888877642110
Q ss_pred -----------------hhhhhccC-C--------------------hHHHhhcCCCCEEEeecCCCccccchhhHHHHH
Q 025236 170 -----------------TLKSRMEG-S--------------------REATRRAASLPILLCHGSGDDVVAYKHGERSAQ 211 (256)
Q Consensus 170 -----------------~~~~~~~~-~--------------------~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~ 211 (256)
.....+.. . .......+++|+|++||++|.++|++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00000000 0 001123468999999999999999999999988
Q ss_pred HHhhcCCcceEEEEeCCCCCcCC-----hHHHHHHHHHHHHHhhh
Q 025236 212 TLNSVGFRDLTFRCYNGVGHYTV-----PEEMDEVRNWLTARLEL 251 (256)
Q Consensus 212 ~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 251 (256)
.+.. .++++++++|++|... .+..+.+.+||..+++.
T Consensus 349 ~~~~---~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 349 EAAS---RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred hcCC---CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 8754 2578999999999863 34578899999988764
No 13
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.92 E-value=1.5e-23 Score=161.76 Aligned_cols=197 Identities=19% Similarity=0.226 Sum_probs=139.7
Q ss_pred cCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 27 RPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
.+..+++.+||++||++.+...|..++..|...||.|++.|+||||.+.- +.. .....+.++..+++
T Consensus 28 ~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r-~~r------------g~~~~f~~~~~dl~ 94 (298)
T COG2267 28 AAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPR-GQR------------GHVDSFADYVDDLD 94 (298)
T ss_pred cCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCC-CCc------------CCchhHHHHHHHHH
Confidence 34444458999999999999999999999999999999999999987642 110 01122445555566
Q ss_pred HHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch--h--------------
Q 025236 107 HVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR--T-------------- 170 (256)
Q Consensus 107 ~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~-------------- 170 (256)
.+.+.+.......+++|+||||||.+++.++.+. +..++++|+.+|++.... .
T Consensus 95 ~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~-----------~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~ 163 (298)
T COG2267 95 AFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY-----------PPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163 (298)
T ss_pred HHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC-----------CccccEEEEECccccCChhHHHHHHHHHhcccccc
Confidence 6666555544567999999999999999999975 678899998888754320 0
Q ss_pred ------hh---------hh----------ccCChH-----------------------HHhhcCCCCEEEeecCCCcccc
Q 025236 171 ------LK---------SR----------MEGSRE-----------------------ATRRAASLPILLCHGSGDDVVA 202 (256)
Q Consensus 171 ------~~---------~~----------~~~~~~-----------------------~~~~~~~~p~l~~~G~~D~~~~ 202 (256)
.. .. +..++. ......++|+|+++|++|.+++
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred cccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcccc
Confidence 00 00 000000 0133468999999999999999
Q ss_pred -chhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh-------HHHHHHHHHHHHHhh
Q 025236 203 -YKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP-------EEMDEVRNWLTARLE 250 (256)
Q Consensus 203 -~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~ 250 (256)
.+...++++.+.. +++++++++|+.|.... +.++.+.+|+.+..+
T Consensus 244 ~~~~~~~~~~~~~~---~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 244 NVEGLARFFERAGS---PDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CcHHHHHHHHhcCC---CCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 5655555555544 67899999999998652 346777888877654
No 14
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.92 E-value=2.7e-23 Score=160.60 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=120.0
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
+..++|||+||++++...|..+.+.|. ++|+|+++|++|+|.+.... .....+++.+.+..+.+
T Consensus 23 ~~~~plvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~---------------~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLELVFPFIEALD-PDLEVIAFDVPGVGGSSTPR---------------HPYRFPGLAKLAARMLD 86 (276)
T ss_pred CCCCcEEEEeCCCcchHHHHHHHHHhc-cCceEEEECCCCCCCCCCCC---------------CcCcHHHHHHHHHHHHH
Confidence 344689999999999999999999997 57999999999987653211 11123344444444443
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc-----------------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC----------------------- 167 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------------- 167 (256)
.+ ...+++|+||||||.+++.+|.+. |++++++|++++....
T Consensus 87 ~l----~~~~~~LvG~S~GG~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T TIGR02240 87 YL----DYGQVNAIGVSWGGALAQQFAHDY-----------PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS 151 (276)
T ss_pred Hh----CcCceEEEEECHHHHHHHHHHHHC-----------HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc
Confidence 33 223899999999999999999976 4444444444332100
Q ss_pred -----------------chhh---hhh----------------ccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHH
Q 025236 168 -----------------SRTL---KSR----------------MEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQ 211 (256)
Q Consensus 168 -----------------~~~~---~~~----------------~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~ 211 (256)
.... ... ...........+++|+|+++|++|+++|.+.++.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 152 HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0000 000 0000011234678999999999999999999988988
Q ss_pred HHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHhh
Q 025236 212 TLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLE 250 (256)
Q Consensus 212 ~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 250 (256)
.+ ++.+++++++ ||..+.+..+.+.+.+.+++.
T Consensus 232 ~~-----~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~ 264 (276)
T TIGR02240 232 RI-----PNAELHIIDD-GHLFLITRAEAVAPIIMKFLA 264 (276)
T ss_pred hC-----CCCEEEEEcC-CCchhhccHHHHHHHHHHHHH
Confidence 87 4678888886 999775544444444444443
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.91 E-value=4e-23 Score=157.83 Aligned_cols=184 Identities=18% Similarity=0.175 Sum_probs=125.6
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
.+.|+||++||++++...|..+...+. .+|.|+++|++|+|.+.... ....++.+.++.+.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~~~~~~ 72 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGEL-----------------PPGYSIAHMADDVLQ 72 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCC-----------------cccCCHHHHHHHHHH
Confidence 457899999999999999999888887 67999999999987543210 011234555555555
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh-------------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL------------------- 171 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------------------- 171 (256)
++... ...+++++||||||++++.++.+. +..++++|+++++.......
T Consensus 73 ~i~~~-~~~~~~l~G~S~Gg~~a~~~a~~~-----------~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T TIGR03611 73 LLDAL-NIERFHFVGHALGGLIGLQLALRY-----------PERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAY 140 (257)
T ss_pred HHHHh-CCCcEEEEEechhHHHHHHHHHHC-----------hHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchh
Confidence 55443 234899999999999999999865 55677777666543211000
Q ss_pred --------------hh-----------hcc-----------------CChHHHhhcCCCCEEEeecCCCccccchhhHHH
Q 025236 172 --------------KS-----------RME-----------------GSREATRRAASLPILLCHGSGDDVVAYKHGERS 209 (256)
Q Consensus 172 --------------~~-----------~~~-----------------~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~ 209 (256)
.. ... ..........++|+++++|++|.++|.+.++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 220 (257)
T TIGR03611 141 VHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRL 220 (257)
T ss_pred hhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHH
Confidence 00 000 000112335689999999999999999998888
Q ss_pred HHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 210 AQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
.+.+ ++.+++.++++||.+..+..+.+.+.+.+.+
T Consensus 221 ~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 255 (257)
T TIGR03611 221 AAAL-----PNAQLKLLPYGGHASNVTDPETFNRALLDFL 255 (257)
T ss_pred HHhc-----CCceEEEECCCCCCccccCHHHHHHHHHHHh
Confidence 8877 3678999999999977554444444444443
No 16
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=6e-23 Score=160.10 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=124.7
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
+.|+||++||+++++..|..+...|+. .++|+++|++|+|.+....... . ......++.+.++.+.++
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~--------~---~~~~~~~~~~~a~~l~~~ 95 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRS--------A---PPNSFYTFETWGEQLNDF 95 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCcccc--------c---cccccCCHHHHHHHHHHH
Confidence 357899999999999999999999984 4799999999987654221000 0 000122345555555555
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc---------chh----h-------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC---------SRT----L------- 171 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~----~------- 171 (256)
+..... ++++|+||||||.+++.+|.+. |++++++|++++.... ... +
T Consensus 96 l~~l~~-~~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
T PLN02824 96 CSDVVG-DPAFVICNSVGGVVGLQAAVDA-----------PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRET 163 (294)
T ss_pred HHHhcC-CCeEEEEeCHHHHHHHHHHHhC-----------hhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhch
Confidence 554322 4899999999999999999965 7788888877653210 000 0
Q ss_pred ----------------hhh----ccC-----------------------------------ChHHHhhcCCCCEEEeecC
Q 025236 172 ----------------KSR----MEG-----------------------------------SREATRRAASLPILLCHGS 196 (256)
Q Consensus 172 ----------------~~~----~~~-----------------------------------~~~~~~~~~~~p~l~~~G~ 196 (256)
... +.. ........+++|+|+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 243 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGE 243 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEec
Confidence 000 000 0011233568899999999
Q ss_pred CCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 197 GDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 197 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
+|..+|.+.++.+.+.. ++.++++++++||+...+..+.+.+-|.+.
T Consensus 244 ~D~~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 244 KDPWEPVELGRAYANFD-----AVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred CCCCCChHHHHHHHhcC-----CccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 99999998887765554 357899999999998755444444433333
No 17
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.91 E-value=4.2e-22 Score=153.34 Aligned_cols=207 Identities=16% Similarity=0.190 Sum_probs=134.6
Q ss_pred CCCceEEEEEccCCCCCCchHHH--hhhc-CCCCeEEEeeCCCCCCCcccCCC------ccccccccCCCCCCCCCCccc
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQL--LETL-PLPNIKWICPTAPTRPVAIFGGY------PCTAWFDVGDLSEDGPDDLEG 100 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~~--~~~l-~~~g~~vi~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 100 (256)
.++.|+|+++||++++...|... ...+ ...|+.|++||...+|.+..+.. ....|+-.. ...........
T Consensus 39 ~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~-~~~~~~~~~~~ 117 (275)
T TIGR02821 39 AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDA-TEEPWSQHYRM 117 (275)
T ss_pred CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccC-CcCcccccchH
Confidence 34679999999999998887542 2334 45699999999865554432210 001121000 00000001111
Q ss_pred HHHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch------hhh
Q 025236 101 LDASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR------TLK 172 (256)
Q Consensus 101 ~~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~ 172 (256)
....++.+..++... .+.++++++||||||++++.++.+. |..+++++++++...... .+.
T Consensus 118 ~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (275)
T TIGR02821 118 YSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN-----------PDRFKSVSAFAPIVAPSRCPWGQKAFS 186 (275)
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC-----------cccceEEEEECCccCcccCcchHHHHH
Confidence 223344555555442 3446899999999999999999965 888999999888753211 011
Q ss_pred hhccCC--------hHH--HhhcCCCCEEEeecCCCccccc-hhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHHH
Q 025236 173 SRMEGS--------REA--TRRAASLPILLCHGSGDDVVAY-KHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEMD 239 (256)
Q Consensus 173 ~~~~~~--------~~~--~~~~~~~p~l~~~G~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~ 239 (256)
..+... ... ......+|+++.+|+.|+.+|. ..++.+.+.+++.|. ++++.++||++|.+. ...+.
T Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~-~v~~~~~~g~~H~f~~~~~~~~ 265 (275)
T TIGR02821 187 AYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ-ALTLRRQAGYDHSYYFIASFIA 265 (275)
T ss_pred HHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC-CeEEEEeCCCCccchhHHHhHH
Confidence 101000 001 1112467999999999999998 578899999999998 899999999999866 67788
Q ss_pred HHHHHHHHHh
Q 025236 240 EVRNWLTARL 249 (256)
Q Consensus 240 ~~~~~l~~~l 249 (256)
..++|..+++
T Consensus 266 ~~~~~~~~~~ 275 (275)
T TIGR02821 266 DHLRHHAERL 275 (275)
T ss_pred HHHHHHHhhC
Confidence 8888887753
No 18
>PLN02965 Probable pheophorbidase
Probab=99.91 E-value=1e-22 Score=155.56 Aligned_cols=183 Identities=14% Similarity=0.160 Sum_probs=125.9
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
..|||+||++.+...|..+...|++.+|+|+++|++|+|.+.... ....++.+.++++.+++.
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~-----------------~~~~~~~~~a~dl~~~l~ 66 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS-----------------NTVSSSDQYNRPLFALLS 66 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc-----------------cccCCHHHHHHHHHHHHH
Confidence 359999999999999999999997789999999999987543111 011235555566666665
Q ss_pred cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC------cc-------------------
Q 025236 114 TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP------CS------------------- 168 (256)
Q Consensus 114 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~------------------- 168 (256)
......+++|+||||||.+++.++.++ |++++++|.+++..+ ..
T Consensus 67 ~l~~~~~~~lvGhSmGG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
T PLN02965 67 DLPPDHKVILVGHSIGGGSVTEALCKF-----------TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGE 135 (255)
T ss_pred hcCCCCCEEEEecCcchHHHHHHHHhC-----------chheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeecc
Confidence 532224899999999999999999975 556666665543210 00
Q ss_pred ------------hhhh-hh-ccCCh-------------------------HHHhhcCCCCEEEeecCCCccccchhhHHH
Q 025236 169 ------------RTLK-SR-MEGSR-------------------------EATRRAASLPILLCHGSGDDVVAYKHGERS 209 (256)
Q Consensus 169 ------------~~~~-~~-~~~~~-------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~ 209 (256)
.... .. +.... .......++|+++++|++|.++|++.++.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~ 215 (255)
T PLN02965 136 GPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVM 215 (255)
T ss_pred CCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHH
Confidence 0000 00 00000 001124789999999999999999999999
Q ss_pred HHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 210 AQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
.+.+ ++.++++++++||+++.+..+.+.+.|.+.+
T Consensus 216 ~~~~-----~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~ 250 (255)
T PLN02965 216 VENW-----PPAQTYVLEDSDHSAFFSVPTTLFQYLLQAV 250 (255)
T ss_pred HHhC-----CcceEEEecCCCCchhhcCHHHHHHHHHHHH
Confidence 9888 4689999999999988665555555554443
No 19
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.90 E-value=1.5e-22 Score=171.30 Aligned_cols=197 Identities=23% Similarity=0.311 Sum_probs=136.4
Q ss_pred ceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
.|+||++||+..... .|....+.|+..||.|+.++++|.. |++. .|.+.. ...-...+.+++.+.++.+.+
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~-----GyG~-~F~~~~-~~~~g~~~~~D~~~~~~~l~~ 466 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGST-----GYGR-EFADAI-RGDWGGVDLEDLIAAVDALVK 466 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCC-----ccHH-HHHHhh-hhccCCccHHHHHHHHHHHHh
Confidence 499999999854433 4667888999999999999999742 3221 111100 111112234444444443221
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc--------------chh------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC--------------SRT------ 170 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------~~~------ 170 (256)
. ...+.+|++|+|+|+||++++.++.+. + .+++++...+.... .+.
T Consensus 467 ~--~~~d~~ri~i~G~SyGGymtl~~~~~~-----------~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (620)
T COG1506 467 L--PLVDPERIGITGGSYGGYMTLLAATKT-----------P-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPP 532 (620)
T ss_pred C--CCcChHHeEEeccChHHHHHHHHHhcC-----------c-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcc
Confidence 1 234557999999999999999999863 3 67777666553210 000
Q ss_pred --hhhhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh-----HHHHHHHH
Q 025236 171 --LKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP-----EEMDEVRN 243 (256)
Q Consensus 171 --~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-----~~~~~~~~ 243 (256)
........+......+++|+|++||++|..||.++++.+.+.|+..|. +++++++|+.+|.+.. +.++.+.+
T Consensus 533 ~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~-~~~~~~~p~e~H~~~~~~~~~~~~~~~~~ 611 (620)
T COG1506 533 EDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK-PVELVVFPDEGHGFSRPENRVKVLKEILD 611 (620)
T ss_pred cChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc-eEEEEEeCCCCcCCCCchhHHHHHHHHHH
Confidence 001112233345677899999999999999999999999999999998 9999999999999773 35788999
Q ss_pred HHHHHhhh
Q 025236 244 WLTARLEL 251 (256)
Q Consensus 244 ~l~~~l~~ 251 (256)
|++++++.
T Consensus 612 ~~~~~~~~ 619 (620)
T COG1506 612 WFKRHLKQ 619 (620)
T ss_pred HHHHHhcC
Confidence 99998864
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.90 E-value=1.7e-22 Score=154.46 Aligned_cols=173 Identities=20% Similarity=0.134 Sum_probs=119.1
Q ss_pred CCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
++..|.|||+||++++...|..+...|. ..|+|+++|++|+|.+.... ..++.+.++.+.
T Consensus 10 G~g~~~ivllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-------------------~~~~~~~~~~l~ 69 (256)
T PRK10349 10 GQGNVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFG-------------------ALSLADMAEAVL 69 (256)
T ss_pred CCCCCeEEEECCCCCChhHHHHHHHHHh-cCCEEEEecCCCCCCCCCCC-------------------CCCHHHHHHHHH
Confidence 4444579999999999999999999997 56999999999987543110 112444444444
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc---------c------------
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC---------S------------ 168 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~------------ 168 (256)
++ ..+++.++||||||.+++.+|.+. |.+++++|++++.... .
T Consensus 70 ~~-----~~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (256)
T PRK10349 70 QQ-----APDKAIWLGWSLGGLVASQIALTH-----------PERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLS 133 (256)
T ss_pred hc-----CCCCeEEEEECHHHHHHHHHHHhC-----------hHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHH
Confidence 32 124899999999999999999865 6777777766542100 0
Q ss_pred ----hhhhhh-----cc----------------C-------------------ChHHHhhcCCCCEEEeecCCCccccch
Q 025236 169 ----RTLKSR-----ME----------------G-------------------SREATRRAASLPILLCHGSGDDVVAYK 204 (256)
Q Consensus 169 ----~~~~~~-----~~----------------~-------------------~~~~~~~~~~~p~l~~~G~~D~~~~~~ 204 (256)
...... .. . ........+++|+|+++|+.|.++|.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 213 (256)
T PRK10349 134 DDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRK 213 (256)
T ss_pred hchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHH
Confidence 000000 00 0 001123456899999999999999998
Q ss_pred hhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHH
Q 025236 205 HGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRN 243 (256)
Q Consensus 205 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 243 (256)
.++.+.+.+ ++.++++++++||+...+..+.+.+
T Consensus 214 ~~~~~~~~i-----~~~~~~~i~~~gH~~~~e~p~~f~~ 247 (256)
T PRK10349 214 VVPMLDKLW-----PHSESYIFAKAAHAPFISHPAEFCH 247 (256)
T ss_pred HHHHHHHhC-----CCCeEEEeCCCCCCccccCHHHHHH
Confidence 888777777 4789999999999987554444333
No 21
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=5.8e-22 Score=155.11 Aligned_cols=186 Identities=11% Similarity=0.093 Sum_probs=121.7
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
..|+|||+||++++...|..+++.|++.||+|+++|++|+|.+..... . ...++.+.++.+.++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~-------------~---~~~~~~~~a~~l~~~ 108 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTR-------------R---EDYTYARHVEWMRSW 108 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC-------------c---ccCCHHHHHHHHHHH
Confidence 357899999999999999999999987899999999999875532110 0 012345555566666
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------------- 169 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------- 169 (256)
+... ...++.|+||||||.+++.++.+. |..+++++++++..+...
T Consensus 109 l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (302)
T PRK00870 109 FEQL-DLTDVTLVCQDWGGLIGLRLAAEH-----------PDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPV 176 (302)
T ss_pred HHHc-CCCCEEEEEEChHHHHHHHHHHhC-----------hhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhH
Confidence 6543 234899999999999999999865 556666665543211000
Q ss_pred --------------hhhhhcc---------C----------------Ch------HHHhhcCCCCEEEeecCCCccccch
Q 025236 170 --------------TLKSRME---------G----------------SR------EATRRAASLPILLCHGSGDDVVAYK 204 (256)
Q Consensus 170 --------------~~~~~~~---------~----------------~~------~~~~~~~~~p~l~~~G~~D~~~~~~ 204 (256)
.....+. . .. ......+++|+++++|++|.++|..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 256 (302)
T PRK00870 177 GRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGG 256 (302)
T ss_pred HHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCc
Confidence 0000000 0 00 0112456899999999999999976
Q ss_pred hhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 205 HGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 205 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
. +.+.+.+.... ...+++++++||+...+..+.+.+.|.+.
T Consensus 257 ~-~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 297 (302)
T PRK00870 257 D-AILQKRIPGAA--GQPHPTIKGAGHFLQEDSGEELAEAVLEF 297 (302)
T ss_pred h-HHHHhhccccc--ccceeeecCCCccchhhChHHHHHHHHHH
Confidence 5 77777774210 13488999999997755444444443333
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.90 E-value=3.6e-22 Score=151.72 Aligned_cols=182 Identities=18% Similarity=0.191 Sum_probs=121.8
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
.+|+||++||++.+...|..+++.|. .+|.|+++|++|+|.+.... . ..++.+.++.+.+.
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~---------------~---~~~~~~~~~~~~~~ 72 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE---------------G---PYSIEDLADDVLAL 72 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC---------------C---CCCHHHHHHHHHHH
Confidence 57899999999999999999999887 68999999999987542110 0 11344444455555
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------------- 169 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------- 169 (256)
+... ..++++++|||+||++++.+|.+. |..+++++++++......
T Consensus 73 i~~~-~~~~v~liG~S~Gg~~a~~~a~~~-----------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
T TIGR02427 73 LDHL-GIERAVFCGLSLGGLIAQGLAARR-----------PDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADA 140 (251)
T ss_pred HHHh-CCCceEEEEeCchHHHHHHHHHHC-----------HHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHH
Confidence 5433 234899999999999999999865 445555554432210000
Q ss_pred -------------------hhhhhc----------------cCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHh
Q 025236 170 -------------------TLKSRM----------------EGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLN 214 (256)
Q Consensus 170 -------------------~~~~~~----------------~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~ 214 (256)
.+.... ...........++|+++++|++|..+|.+..+.+.+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~- 219 (251)
T TIGR02427 141 VLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV- 219 (251)
T ss_pred HHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC-
Confidence 000000 00001123456799999999999999999888887777
Q ss_pred hcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 215 SVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 215 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
++.+++++++++|..+.+..+.+.+.+.+.+
T Consensus 220 ----~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 220 ----PGARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred ----CCceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 3678999999999877555555555555443
No 23
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.89 E-value=7.4e-23 Score=152.56 Aligned_cols=198 Identities=20% Similarity=0.270 Sum_probs=124.1
Q ss_pred eeecCCC-CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCC--ccccccccCCCCCCCCCCccc
Q 025236 24 HVVRPKG-KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGY--PCTAWFDVGDLSEDGPDDLEG 100 (256)
Q Consensus 24 ~~~~~~~-~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 100 (256)
|+..|.+ .+.|.||++|++.+-......+++.|++.||.|++||+........... ....+... . ....+.
T Consensus 4 y~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~---~---~~~~~~ 77 (218)
T PF01738_consen 4 YVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMREL---F---APRPEQ 77 (218)
T ss_dssp EEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHC---H---HHSHHH
T ss_pred EEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHH---H---hhhHHH
Confidence 4444544 4789999999988776777889999999999999999864322000000 00000000 0 000112
Q ss_pred HHHHHHHHHHHHhcCC--CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCC
Q 025236 101 LDASAAHVANLLSTEP--ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGS 178 (256)
Q Consensus 101 ~~~~~~~l~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 178 (256)
....+....+.+.... +..+|+++|+|+||.+++.++.+ ...+++++.+.|......
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~------------~~~~~a~v~~yg~~~~~~--------- 136 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR------------DPRVDAAVSFYGGSPPPP--------- 136 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC------------TTTSSEEEEES-SSSGGG---------
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhh------------ccccceEEEEcCCCCCCc---------
Confidence 2333333345555443 45799999999999999999873 357899999888211111
Q ss_pred hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC------------hHHHHHHHHHHH
Q 025236 179 REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV------------PEEMDEVRNWLT 246 (256)
Q Consensus 179 ~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------------~~~~~~~~~~l~ 246 (256)
........++|+++++|++|+.++.+..+.+.+.+++.+. ++++++|+|++|.|. .+.++.+++||+
T Consensus 137 ~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 137 PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGV-DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT-TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCC-cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 1113356789999999999999999999999999988887 899999999999876 234678888887
Q ss_pred HHh
Q 025236 247 ARL 249 (256)
Q Consensus 247 ~~l 249 (256)
++|
T Consensus 216 ~~L 218 (218)
T PF01738_consen 216 RHL 218 (218)
T ss_dssp C--
T ss_pred hcC
Confidence 654
No 24
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=2e-22 Score=142.21 Aligned_cols=180 Identities=17% Similarity=0.183 Sum_probs=126.3
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
.+||++||+.++..+.+.+.+.|.++||.|.+|.++|||..... .-.+ ..+++-+.+....+.+.
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-fl~t--------------~~~DW~~~v~d~Y~~L~ 80 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED-FLKT--------------TPRDWWEDVEDGYRDLK 80 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH-HhcC--------------CHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999754311 0001 12222222222222233
Q ss_pred -cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc------------------------
Q 025236 114 -TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS------------------------ 168 (256)
Q Consensus 114 -~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------ 168 (256)
+.++ .|.++|.||||.+++.+|.+. | ++++|.+|......
T Consensus 81 ~~gy~--eI~v~GlSmGGv~alkla~~~-----------p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~ 145 (243)
T COG1647 81 EAGYD--EIAVVGLSMGGVFALKLAYHY-----------P--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQ 145 (243)
T ss_pred HcCCC--eEEEEeecchhHHHHHHHhhC-----------C--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCH
Confidence 3333 999999999999999999954 3 67888777653310
Q ss_pred hhhhhh---ccC--------------ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCC
Q 025236 169 RTLKSR---MEG--------------SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGH 231 (256)
Q Consensus 169 ~~~~~~---~~~--------------~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 231 (256)
+.+... +.. ........+..|++++.|.+|+.+|.+.+..+++.... .+.++.++++.||
T Consensus 146 e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s---~~KeL~~~e~SgH 222 (243)
T COG1647 146 EQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES---DDKELKWLEGSGH 222 (243)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC---CcceeEEEccCCc
Confidence 000000 000 00013345788999999999999999999999999987 5789999999999
Q ss_pred cCChH-----HHHHHHHHHH
Q 025236 232 YTVPE-----EMDEVRNWLT 246 (256)
Q Consensus 232 ~~~~~-----~~~~~~~~l~ 246 (256)
.+..+ ..+.++.||+
T Consensus 223 VIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 223 VITLDKERDQVEEDVITFLE 242 (243)
T ss_pred eeecchhHHHHHHHHHHHhh
Confidence 87632 3466777775
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.89 E-value=6.9e-22 Score=149.70 Aligned_cols=173 Identities=16% Similarity=0.102 Sum_probs=118.9
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
+|+||++||++++...|..+.+.|+ .+|+|+++|++|+|.+... ...++.+.++.+.+.+
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~-------------------~~~~~~~~~~~~~~~~ 63 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGF-------------------GPLSLADAAEAIAAQA 63 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCC-------------------CCcCHHHHHHHHHHhC
Confidence 4789999999999999999999997 5799999999988653210 0123555555554443
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc------c------------------
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC------S------------------ 168 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~------------------ 168 (256)
. .+++++||||||.+++.++.+. |+.++++|.+++.... .
T Consensus 64 ~-----~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (245)
T TIGR01738 64 P-----DPAIWLGWSLGGLVALHIAATH-----------PDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDD 127 (245)
T ss_pred C-----CCeEEEEEcHHHHHHHHHHHHC-----------HHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhh
Confidence 2 3899999999999999999865 5556666655432110 0
Q ss_pred -h-hhh---------------------hhcc-------------------CChHHHhhcCCCCEEEeecCCCccccchhh
Q 025236 169 -R-TLK---------------------SRME-------------------GSREATRRAASLPILLCHGSGDDVVAYKHG 206 (256)
Q Consensus 169 -~-~~~---------------------~~~~-------------------~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~ 206 (256)
. ... .... .........+++|+++++|++|..+|.+..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~ 207 (245)
T TIGR01738 128 YQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVV 207 (245)
T ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHH
Confidence 0 000 0000 000112346789999999999999999988
Q ss_pred HHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHH
Q 025236 207 ERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLT 246 (256)
Q Consensus 207 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 246 (256)
+.+.+.+ +++++++++++||+...+..+.+.+-+.
T Consensus 208 ~~~~~~~-----~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 208 PYLDKLA-----PHSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred HHHHHhC-----CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 8887777 4789999999999977554444444333
No 26
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.89 E-value=3.5e-22 Score=139.54 Aligned_cols=145 Identities=23% Similarity=0.310 Sum_probs=112.5
Q ss_pred EEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhc
Q 025236 35 TIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLST 114 (256)
Q Consensus 35 ~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (256)
+||++||++.+...|..+++.|++.||.|+.+|+++++.+. ...++.+.++.+. ..
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~---------------------~~~~~~~~~~~~~---~~ 56 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSD---------------------GADAVERVLADIR---AG 56 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSH---------------------HSHHHHHHHHHHH---HH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccc---------------------hhHHHHHHHHHHH---hh
Confidence 58999999999999999999999999999999998754220 0122333333332 11
Q ss_pred CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEee
Q 025236 115 EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCH 194 (256)
Q Consensus 115 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 194 (256)
..+.++++++|||+||.+++.++.+ ..+++++|+++++.. .. .....+.|+++++
T Consensus 57 ~~~~~~i~l~G~S~Gg~~a~~~~~~------------~~~v~~~v~~~~~~~-~~------------~~~~~~~pv~~i~ 111 (145)
T PF12695_consen 57 YPDPDRIILIGHSMGGAIAANLAAR------------NPRVKAVVLLSPYPD-SE------------DLAKIRIPVLFIH 111 (145)
T ss_dssp HCTCCEEEEEEETHHHHHHHHHHHH------------STTESEEEEESESSG-CH------------HHTTTTSEEEEEE
T ss_pred cCCCCcEEEEEEccCcHHHHHHhhh------------ccceeEEEEecCccc-hh------------hhhccCCcEEEEE
Confidence 1255699999999999999999985 378999999999421 11 2345677999999
Q ss_pred cCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 195 GSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 195 G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
|++|..+|.+..+++++.++. +.++++++|++|+
T Consensus 112 g~~D~~~~~~~~~~~~~~~~~----~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 112 GENDPLVPPEQVRRLYEALPG----PKELYIIPGAGHF 145 (145)
T ss_dssp ETT-SSSHHHHHHHHHHHHCS----SEEEEEETTS-TT
T ss_pred ECCCCcCCHHHHHHHHHHcCC----CcEEEEeCCCcCc
Confidence 999999999999999999973 7899999999995
No 27
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=1.3e-21 Score=158.00 Aligned_cols=192 Identities=18% Similarity=0.159 Sum_probs=129.7
Q ss_pred eeecCCCCCceEEEEEccCCCCC-CchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH
Q 025236 24 HVVRPKGKHQATIVWLHGLSDKG-SSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD 102 (256)
Q Consensus 24 ~~~~~~~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (256)
++.+..+++.|+||++||+++.. ..|..+++.|+..||.|+++|++|+|.+.... . ..+..
T Consensus 185 l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-----------~-------~~d~~ 246 (414)
T PRK05077 185 LHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-----------L-------TQDSS 246 (414)
T ss_pred EEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-----------c-------cccHH
Confidence 33343446788999888887764 45777888999899999999999886542100 0 01122
Q ss_pred HHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc-----------h
Q 025236 103 ASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS-----------R 169 (256)
Q Consensus 103 ~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~ 169 (256)
.....+.+++... .+.++|+++||||||++++.+|... +.+++++|++++..... .
T Consensus 247 ~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~-----------p~ri~a~V~~~~~~~~~~~~~~~~~~~p~ 315 (414)
T PRK05077 247 LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE-----------PPRLKAVACLGPVVHTLLTDPKRQQQVPE 315 (414)
T ss_pred HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-----------CcCceEEEEECCccchhhcchhhhhhchH
Confidence 2223444444432 3557999999999999999999854 67899999988764310 0
Q ss_pred h----hhhhcc---CC--------------hHH-HhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeC
Q 025236 170 T----LKSRME---GS--------------REA-TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYN 227 (256)
Q Consensus 170 ~----~~~~~~---~~--------------~~~-~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 227 (256)
. +...+. .. ... .....++|+|+++|++|+++|.+.++.+.+.. ++.+++++|
T Consensus 316 ~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-----~~~~l~~i~ 390 (414)
T PRK05077 316 MYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-----ADGKLLEIP 390 (414)
T ss_pred HHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-----CCCeEEEcc
Confidence 0 000000 00 000 11346789999999999999999998777666 468999999
Q ss_pred CCCCc-CChHHHHHHHHHHHHHh
Q 025236 228 GVGHY-TVPEEMDEVRNWLTARL 249 (256)
Q Consensus 228 g~~H~-~~~~~~~~~~~~l~~~l 249 (256)
++.|. ...+..+.+.+||+++|
T Consensus 391 ~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 391 FKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred CCCccCCHHHHHHHHHHHHHHHh
Confidence 86333 23556789999998875
No 28
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.89 E-value=2e-21 Score=150.31 Aligned_cols=181 Identities=23% Similarity=0.266 Sum_probs=121.5
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
..|+||++||++++...|..+...|+ ++|+|+++|++|+|.+..... ...++...++.+.++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-----------------~~~~~~~~~~~l~~~ 88 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPFR-----------------FRFTLPSMAEDLSAL 88 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCccc-----------------cCCCHHHHHHHHHHH
Confidence 46899999999999999999999997 579999999999875432110 012345555555555
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc-----------------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS----------------------- 168 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------------- 168 (256)
+... ...+++|+||||||.+++.++.+. +.++++++++++.....
T Consensus 89 i~~~-~~~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 89 CAAE-GLSPDGVIGHSAGAAIALRLALDG-----------PVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHc-CCCCceEEEECccHHHHHHHHHhC-----------CcccceEEEEcCcccccccccccccchhhHhhhhcccchH
Confidence 5443 234889999999999999999865 55566665554321100
Q ss_pred ---------hhhhh-------------------hccC-----------------ChHHHhhcCCCCEEEeecCCCccccc
Q 025236 169 ---------RTLKS-------------------RMEG-----------------SREATRRAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 169 ---------~~~~~-------------------~~~~-----------------~~~~~~~~~~~p~l~~~G~~D~~~~~ 203 (256)
..+.. .... ........+++|+++++|++|..+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred HHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 00000 0000 00011234678999999999999999
Q ss_pred hhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHH
Q 025236 204 KHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTA 247 (256)
Q Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 247 (256)
+.++.+.+.+ ++.+++.++++||.+..+..+.+.+-|.+
T Consensus 237 ~~~~~~~~~~-----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 275 (278)
T TIGR03056 237 DESKRAATRV-----PTATLHVVPGGGHLVHEEQADGVVGLILQ 275 (278)
T ss_pred HHHHHHHHhc-----cCCeEEEECCCCCcccccCHHHHHHHHHH
Confidence 8888887777 46899999999999775544444444443
No 29
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.89 E-value=1.6e-22 Score=150.33 Aligned_cols=181 Identities=19% Similarity=0.233 Sum_probs=122.0
Q ss_pred hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhc-CCCCceeEEeEeC
Q 025236 49 WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLST-EPADIKLGIGGFS 127 (256)
Q Consensus 49 ~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~i~l~G~S 127 (256)
|......|++.||.|+.+|+||.+ +++. .|.... . ......++.+.+..+..++.. ..+.+||+|+|+|
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~-----g~g~-~~~~~~-~---~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S 72 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSG-----GYGK-DFHEAG-R---GDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHS 72 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSS-----SSHH-HHHHTT-T---TGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEET
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCC-----ccch-hHHHhh-h---ccccccchhhHHHHHHHHhccccccceeEEEEccc
Confidence 345677888899999999999853 2211 222211 0 111122344444444444433 3456799999999
Q ss_pred chhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhh----------hccC---ChH--------HHhhc-
Q 025236 128 MGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKS----------RMEG---SRE--------ATRRA- 185 (256)
Q Consensus 128 ~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----------~~~~---~~~--------~~~~~- 185 (256)
+||++++.++.+. +..++++++.+|.......... .... ... .....
T Consensus 73 ~GG~~a~~~~~~~-----------~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 141 (213)
T PF00326_consen 73 YGGYLALLAATQH-----------PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNV 141 (213)
T ss_dssp HHHHHHHHHHHHT-----------CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGC
T ss_pred ccccccchhhccc-----------ceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccc
Confidence 9999999999865 8889999999887553221111 0000 110 12233
Q ss_pred -CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-----hHHHHHHHHHHHHHhhh
Q 025236 186 -ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-----PEEMDEVRNWLTARLEL 251 (256)
Q Consensus 186 -~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 251 (256)
.++|+|++||++|..||++++..+++.|++.|. +++++++|+++|.+. .+..+.+.+||+++|+.
T Consensus 142 ~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~-~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 142 QIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK-PVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp GGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS-SEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred cCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC-CEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999998 799999999999766 34578899999998874
No 30
>PLN02442 S-formylglutathione hydrolase
Probab=99.89 E-value=3.1e-21 Score=148.75 Aligned_cols=202 Identities=13% Similarity=0.160 Sum_probs=124.5
Q ss_pred CCCceEEEEEccCCCCCCchHH---HhhhcCCCCeEEEeeCCCCCCCcccCCCc------cccccccCCCCCCCC-CCcc
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQ---LLETLPLPNIKWICPTAPTRPVAIFGGYP------CTAWFDVGDLSEDGP-DDLE 99 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~---~~~~l~~~g~~vi~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~ 99 (256)
+++.|+|+++||++++...|.. +.+.+...|+.|+.||...+|........ ...++.......... ....
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 3567999999999988776654 33556677999999998766532111100 001110000000000 0011
Q ss_pred cH-HHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch------hhh
Q 025236 100 GL-DASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR------TLK 172 (256)
Q Consensus 100 ~~-~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~ 172 (256)
.+ ++....+.+.+.. .+.++++|+|+||||++++.++.+. |+.+++++++++...... .+.
T Consensus 124 ~~~~~l~~~i~~~~~~-~~~~~~~i~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (283)
T PLN02442 124 YVVKELPKLLSDNFDQ-LDTSRASIFGHSMGGHGALTIYLKN-----------PDKYKSVSAFAPIANPINCPWGQKAFT 191 (283)
T ss_pred hHHHHHHHHHHHHHHh-cCCCceEEEEEChhHHHHHHHHHhC-----------chhEEEEEEECCccCcccCchhhHHHH
Confidence 11 2222233333322 3456899999999999999999865 888999999988754211 011
Q ss_pred hhccCC--------h---HHHhhcCCCCEEEeecCCCccccch-hhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHH
Q 025236 173 SRMEGS--------R---EATRRAASLPILLCHGSGDDVVAYK-HGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDE 240 (256)
Q Consensus 173 ~~~~~~--------~---~~~~~~~~~p~l~~~G~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 240 (256)
..+... + .......++|+++++|++|+.++.. .++.+.+.+++.|. +++++++||.+|.+. .
T Consensus 192 ~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~-~~~~~~~pg~~H~~~-----~ 265 (283)
T PLN02442 192 NYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA-PVTLRLQPGYDHSYF-----F 265 (283)
T ss_pred HHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC-CeEEEEeCCCCccHH-----H
Confidence 111100 0 0112235789999999999999874 57899999999997 799999999999855 4
Q ss_pred HHHHHHHHh
Q 025236 241 VRNWLTARL 249 (256)
Q Consensus 241 ~~~~l~~~l 249 (256)
+.+||.+++
T Consensus 266 ~~~~i~~~~ 274 (283)
T PLN02442 266 IATFIDDHI 274 (283)
T ss_pred HHHHHHHHH
Confidence 445554443
No 31
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.89 E-value=1.2e-21 Score=149.76 Aligned_cols=180 Identities=16% Similarity=0.161 Sum_probs=123.0
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
..+|+||++||++++...|..++..|. .+|.|+++|++|+|.+.... ..++.+.++.+.+
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~-------------------~~~~~~~~~d~~~ 73 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRDP-------------------VMNYPAMAQDLLD 73 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCCC-------------------CCCHHHHHHHHHH
Confidence 457899999999999999999999997 67999999999986543110 1234444555555
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc------h---------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS------R--------------- 169 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~--------------- 169 (256)
.+... ...+++|+||||||.+++.+|.+. +.+++++++++...... .
T Consensus 74 ~l~~l-~~~~~~lvGhS~Gg~va~~~a~~~-----------~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
T PRK10673 74 TLDAL-QIEKATFIGHSMGGKAVMALTALA-----------PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATT 141 (255)
T ss_pred HHHHc-CCCceEEEEECHHHHHHHHHHHhC-----------HhhcceEEEEecCCCCccchhhHHHHHHHHHhhhccccc
Confidence 55443 234799999999999999999865 67788887764311000 0
Q ss_pred ------hhhhhcc-------------CC-----h-----HH-------HhhcCCCCEEEeecCCCccccchhhHHHHHHH
Q 025236 170 ------TLKSRME-------------GS-----R-----EA-------TRRAASLPILLCHGSGDDVVAYKHGERSAQTL 213 (256)
Q Consensus 170 ------~~~~~~~-------------~~-----~-----~~-------~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l 213 (256)
.+...+. .. . .. .....++|+|+++|++|..++.+.++.+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 221 (255)
T PRK10673 142 RQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF 221 (255)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC
Confidence 0000000 00 0 00 01234689999999999999988888887777
Q ss_pred hhcCCcceEEEEeCCCCCcCChHH----HHHHHHHHHH
Q 025236 214 NSVGFRDLTFRCYNGVGHYTVPEE----MDEVRNWLTA 247 (256)
Q Consensus 214 ~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~ 247 (256)
++.++++++++||.+..+. .+.+.+||.+
T Consensus 222 -----~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 222 -----PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred -----CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 4789999999999876443 4555566543
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.88 E-value=3.7e-21 Score=149.24 Aligned_cols=179 Identities=21% Similarity=0.230 Sum_probs=116.3
Q ss_pred ceEEEEEccCCCCCCchHHH---hhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQL---LETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~---~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
.|.||++||++.+...|..+ ...+.+.||+|+++|++|+|.+..... ..... . ...+.+.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-------------~~~~~---~-~~~~~l~ 92 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVM-------------DEQRG---L-VNARAVK 92 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcC-------------ccccc---c-hhHHHHH
Confidence 46799999999888777643 445556789999999999875532110 00000 1 1123344
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC-------Ccc----hhh-------
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL-------PCS----RTL------- 171 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~----~~~------- 171 (256)
+++... ...+++++||||||.+++.++.+. |.+++++|++++.. +.. ...
T Consensus 93 ~~l~~l-~~~~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
T TIGR03343 93 GLMDAL-DIEKAHLVGNSMGGATALNFALEY-----------PDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEP 160 (282)
T ss_pred HHHHHc-CCCCeeEEEECchHHHHHHHHHhC-----------hHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCC
Confidence 444332 334999999999999999999965 66677777665421 000 000
Q ss_pred -----------------------hh-h---ccC--------------------ChHHHhhcCCCCEEEeecCCCccccch
Q 025236 172 -----------------------KS-R---MEG--------------------SREATRRAASLPILLCHGSGDDVVAYK 204 (256)
Q Consensus 172 -----------------------~~-~---~~~--------------------~~~~~~~~~~~p~l~~~G~~D~~~~~~ 204 (256)
.. . ... ........+++|+|+++|++|.++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~ 240 (282)
T TIGR03343 161 SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLD 240 (282)
T ss_pred CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCch
Confidence 00 0 000 001123457899999999999999999
Q ss_pred hhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHH----HHHHHHH
Q 025236 205 HGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM----DEVRNWL 245 (256)
Q Consensus 205 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l 245 (256)
.++.+.+.+ +++++++++++||+...+.. +.+.+|+
T Consensus 241 ~~~~~~~~~-----~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 241 HGLKLLWNM-----PDAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred hHHHHHHhC-----CCCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 998888888 47999999999999875544 4444554
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.88 E-value=5e-21 Score=147.15 Aligned_cols=186 Identities=14% Similarity=0.115 Sum_probs=127.4
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
+.+|.|||+||++.+...|..+...|.+.||.|+++|++++|.+.... ....++.+.++.+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~-----------------~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDA-----------------DSVTTFDEYNKPLID 78 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCc-----------------ccCCCHHHHHHHHHH
Confidence 446899999999999999999999998789999999999876422110 012345555666776
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch---------------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR--------------------- 169 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------------- 169 (256)
++.......+++|+||||||.+++.++... +.+++++|.++++.+...
T Consensus 79 ~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~-----------p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T PLN02211 79 FLSSLPENEKVILVGHSAGGLSVTQAIHRF-----------PKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVY 147 (273)
T ss_pred HHHhcCCCCCEEEEEECchHHHHHHHHHhC-----------hhheeEEEEeccccCCCCCCHHHHHhccccchhhhccce
Confidence 666543335999999999999999999864 555666665544321000
Q ss_pred -------------------hh-hhh-ccCChH-------------------------HHhhcCCCCEEEeecCCCccccc
Q 025236 170 -------------------TL-KSR-MEGSRE-------------------------ATRRAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 170 -------------------~~-~~~-~~~~~~-------------------------~~~~~~~~p~l~~~G~~D~~~~~ 203 (256)
.+ ... +...+. ......++|++++.|++|..+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 148 ELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred eeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 00 000 000000 00011267999999999999999
Q ss_pred hhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHhh
Q 025236 204 KHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLE 250 (256)
Q Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 250 (256)
+.++.+.+.+. ..+++.++ +||..+-+..+.+.+.|.+..+
T Consensus 228 ~~~~~m~~~~~-----~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 228 EQQEAMIKRWP-----PSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred HHHHHHHHhCC-----ccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 99999998873 45888887 7999886666677777766543
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.87 E-value=1.6e-21 Score=145.96 Aligned_cols=175 Identities=25% Similarity=0.310 Sum_probs=128.4
Q ss_pred EEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcC
Q 025236 36 IVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTE 115 (256)
Q Consensus 36 vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 115 (256)
||++||++++...|..+++.|+ +||.|+++|++|+|.+..... ....++.+.++.+.++++..
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~----------------~~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPD----------------YSPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSS----------------GSGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccc----------------cCCcchhhhhhhhhhccccc
Confidence 7999999999999999999996 899999999998765432110 12344566666666666554
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh---------hhh------------
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL---------KSR------------ 174 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---------~~~------------ 174 (256)
.. .+++++|||+||.+++.++.+. |+.+++++++++........ ...
T Consensus 64 ~~-~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (228)
T PF12697_consen 64 GI-KKVILVGHSMGGMIALRLAARY-----------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA 131 (228)
T ss_dssp TT-SSEEEEEETHHHHHHHHHHHHS-----------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-cccccccccccccccccccccc-----------ccccccceeecccccccccccccccchhhhhhhhcccccccccc
Confidence 43 4899999999999999999865 78999999998877421100 000
Q ss_pred ----------------c----------------cCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceE
Q 025236 175 ----------------M----------------EGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLT 222 (256)
Q Consensus 175 ----------------~----------------~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~ 222 (256)
. ...........++|+++++|++|.+++.+..+.+.+.+ ++++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~-----~~~~ 206 (228)
T PF12697_consen 132 SRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL-----PNAE 206 (228)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS-----TTEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC-----CCCE
Confidence 0 00001133456899999999999999987777777776 4789
Q ss_pred EEEeCCCCCcCChHHHHHHHHH
Q 025236 223 FRCYNGVGHYTVPEEMDEVRNW 244 (256)
Q Consensus 223 ~~~~~g~~H~~~~~~~~~~~~~ 244 (256)
+++++++||....+..+.+.+|
T Consensus 207 ~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 207 LVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEECCCCCccHHHCHHHHhcC
Confidence 9999999999877766666554
No 35
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=7.8e-21 Score=148.29 Aligned_cols=181 Identities=12% Similarity=0.124 Sum_probs=120.5
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
.++||++||++++...|..+++.|++.+ .|+++|++|+|.+.... . ..++...++.+.+++
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~---------------~---~~~~~~~a~dl~~ll 87 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPD---------------I---DYTFADHARYLDAWF 87 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCC---------------C---CCCHHHHHHHHHHHH
Confidence 4789999999999999999999998665 99999999987553211 0 123445455555555
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc------ch-------hhh-------
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC------SR-------TLK------- 172 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~-------~~~------- 172 (256)
+... .++++++||||||.+++.++.+. |+++++++.+++.... .. .+.
T Consensus 88 ~~l~-~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 88 DALG-LDDVVLVGHDWGSALGFDWAARH-----------PDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHhC-CCCeEEEEECHHHHHHHHHHHhC-----------hhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccc
Confidence 4432 24899999999999999999975 6777777766642110 00 000
Q ss_pred ---------h-hcc--------------------CC----------------------------hHHHhhcCCCCEEEee
Q 025236 173 ---------S-RME--------------------GS----------------------------REATRRAASLPILLCH 194 (256)
Q Consensus 173 ---------~-~~~--------------------~~----------------------------~~~~~~~~~~p~l~~~ 194 (256)
. ... .. .......+++|+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 235 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLIN 235 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEe
Confidence 0 000 00 0001133688999999
Q ss_pred cCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChH----HHHHHHHHHHHH
Q 025236 195 GSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPE----EMDEVRNWLTAR 248 (256)
Q Consensus 195 G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----~~~~~~~~l~~~ 248 (256)
|++|.+++......+...+. ++.++++++++||+.+.+ ..+.+.+|+.+.
T Consensus 236 G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 236 AEPGAILTTGAIRDWCRSWP----NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred ccCCcccCcHHHHHHHHHhh----hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 99999996655555544432 368999999999997633 346666676654
No 36
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=1.2e-20 Score=150.68 Aligned_cols=185 Identities=17% Similarity=0.147 Sum_probs=118.3
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
.|+|||+||++++...|..++..|+ .+|+|+++|++|+|.+.... . ...++...++.+.+++
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~--------------~---~~~~~~~~a~~l~~~l 149 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLA-KNYTVYAIDLLGFGASDKPP--------------G---FSYTMETWAELILDFL 149 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCC--------------C---ccccHHHHHHHHHHHH
Confidence 4789999999999999999999997 48999999999987543210 0 0123444555555555
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc-------c-----------------
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC-------S----------------- 168 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~----------------- 168 (256)
.... ..+++|+||||||.+++.++... +|++++++|++++.... .
T Consensus 150 ~~l~-~~~~~lvGhS~Gg~ia~~~a~~~----------~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 150 EEVV-QKPTVLIGNSVGSLACVIAASES----------TRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL 218 (360)
T ss_pred HHhc-CCCeEEEEECHHHHHHHHHHHhc----------ChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh
Confidence 5432 24899999999999999888642 25667776666532100 0
Q ss_pred ----------------hhhhhh----cc-----------------------------------CChHHHhhcCCCCEEEe
Q 025236 169 ----------------RTLKSR----ME-----------------------------------GSREATRRAASLPILLC 193 (256)
Q Consensus 169 ----------------~~~~~~----~~-----------------------------------~~~~~~~~~~~~p~l~~ 193 (256)
..+... +. .........+++|+|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 000000 00 00001233467899999
Q ss_pred ecCCCccccchhh-HHHHHHHhhcCCcceEEEEeCCCCCcCChHHH----HHHHHHHHH
Q 025236 194 HGSGDDVVAYKHG-ERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM----DEVRNWLTA 247 (256)
Q Consensus 194 ~G~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~ 247 (256)
+|++|.++|.+.. ....+.+.+.- ++.++++++++||+.+.|.. +.+.+||.+
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 9999999998742 12333332211 47899999999999775543 455556543
No 37
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.87 E-value=7.7e-21 Score=149.88 Aligned_cols=199 Identities=17% Similarity=0.204 Sum_probs=120.9
Q ss_pred CCceEEEEEccCCCCCC-ch-------------------------HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccc
Q 025236 31 KHQATIVWLHGLSDKGS-SW-------------------------SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAW 84 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~-~~-------------------------~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~ 84 (256)
+++.+|+++||++.... .| ..+++.|.+.||.|+++|++|||.+...... ..
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~-~g- 96 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNL-RG- 96 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCcccccc-cc-
Confidence 57889999999998875 21 4578999889999999999999865422100 00
Q ss_pred cccCCCCCCCCCCcccHHHHHHHHHHHHhc-------------------CCC-CceeEEeEeCchhHHHHHHHHHhhhcc
Q 025236 85 FDVGDLSEDGPDDLEGLDASAAHVANLLST-------------------EPA-DIKLGIGGFSMGAAIALYSATCRILGQ 144 (256)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 144 (256)
....++++.+++..+.+.+.+ ..+ ..+++|+||||||.+++.++...+...
T Consensus 97 ---------~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~ 167 (332)
T TIGR01607 97 ---------HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSN 167 (332)
T ss_pred ---------chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccc
Confidence 001233333333333333222 122 458999999999999999887531100
Q ss_pred CCCCCCCccCcceEEEeccCCCcc-------------------------------h--------hhhhhccCCh------
Q 025236 145 YGNGNPYSVNLSAIVGLSGWLPCS-------------------------------R--------TLKSRMEGSR------ 179 (256)
Q Consensus 145 ~~~~~~~~~~~~~~v~~~~~~~~~-------------------------------~--------~~~~~~~~~~------ 179 (256)
.......++++|+.+|.+... . ...+.+..++
T Consensus 168 ---~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~ 244 (332)
T TIGR01607 168 ---ENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGG 244 (332)
T ss_pred ---ccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccCCc
Confidence 000012466666665542100 0 0000000000
Q ss_pred ----------------HHHhhcC--CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChH-----
Q 025236 180 ----------------EATRRAA--SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPE----- 236 (256)
Q Consensus 180 ----------------~~~~~~~--~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----- 236 (256)
....... ++|+|+++|++|.+++++.++.+++.+.. +++++++++|++|.+..+
T Consensus 245 ~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~---~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 245 ITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI---SNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred ccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC---CCcEEEEECCCCCCCccCCCHHH
Confidence 0011222 68999999999999999998888877654 368999999999997633
Q ss_pred HHHHHHHHHH
Q 025236 237 EMDEVRNWLT 246 (256)
Q Consensus 237 ~~~~~~~~l~ 246 (256)
.++.+.+||.
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 4566667764
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.87 E-value=1.6e-20 Score=142.56 Aligned_cols=181 Identities=22% Similarity=0.294 Sum_probs=117.2
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH-HHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH-VANL 111 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 111 (256)
+|+||++||++++...|..+.+.|+ .++.|+++|++++|.+.... .....++.+.++. +..+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~----------------~~~~~~~~~~~~~~~~~~ 63 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPD----------------EIERYDFEEAAQDILATL 63 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC----------------ccChhhHHHHHHHHHHHH
Confidence 3689999999999999999999998 89999999999876543211 0112345555555 3333
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------------- 169 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------- 169 (256)
+.. ...++++++|||+||.+++.++.+. +..+++++.+++......
T Consensus 64 ~~~-~~~~~~~l~G~S~Gg~ia~~~a~~~-----------~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (251)
T TIGR03695 64 LDQ-LGIEPFFLVGYSMGGRIALYYALQY-----------PERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEG 131 (251)
T ss_pred HHH-cCCCeEEEEEeccHHHHHHHHHHhC-----------chheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcC
Confidence 332 3445899999999999999999965 566777776654321100
Q ss_pred --h----hhh-----h---ccC-------------------------------ChHHHhhcCCCCEEEeecCCCccccch
Q 025236 170 --T----LKS-----R---MEG-------------------------------SREATRRAASLPILLCHGSGDDVVAYK 204 (256)
Q Consensus 170 --~----~~~-----~---~~~-------------------------------~~~~~~~~~~~p~l~~~G~~D~~~~~~ 204 (256)
. +.. . ... .........++|+++++|++|..++ +
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~ 210 (251)
T TIGR03695 132 LEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q 210 (251)
T ss_pred ccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H
Confidence 0 000 0 000 0001123567999999999998763 3
Q ss_pred hhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 205 HGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 205 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
..+.+.+.+ +++++++++++||....+..+.+.+.|.+.
T Consensus 211 ~~~~~~~~~-----~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~ 249 (251)
T TIGR03695 211 IAKEMQKLL-----PNLTLVIIANAGHNIHLENPEAFAKILLAF 249 (251)
T ss_pred HHHHHHhcC-----CCCcEEEEcCCCCCcCccChHHHHHHHHHH
Confidence 334444333 378999999999997755444444444443
No 39
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=7.1e-21 Score=138.25 Aligned_cols=194 Identities=19% Similarity=0.265 Sum_probs=137.9
Q ss_pred ceeecCCCCCceEEEEEccCCCCCCchHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccH
Q 025236 23 THVVRPKGKHQATIVWLHGLSDKGSSWSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGL 101 (256)
Q Consensus 23 ~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (256)
+.++++.....++||++||...+......+...+.. -++.++.+|++|-|.+. |. +......+|+
T Consensus 50 ~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~--G~------------psE~n~y~Di 115 (258)
T KOG1552|consen 50 CMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSS--GK------------PSERNLYADI 115 (258)
T ss_pred EEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccC--CC------------cccccchhhH
Confidence 455566555679999999987776655556666653 48999999998754332 21 1111223444
Q ss_pred HHHHHHHHHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhh------
Q 025236 102 DASAAHVANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSR------ 174 (256)
Q Consensus 102 ~~~~~~l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------ 174 (256)
.++. +++++.. ..++|+|+|+|+|...++.+|.+. + ++++|+.+|+....+.+...
T Consensus 116 ~avy----e~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~-----------~--~~alVL~SPf~S~~rv~~~~~~~~~~ 178 (258)
T KOG1552|consen 116 KAVY----EWLRNRYGSPERIILYGQSIGTVPTVDLASRY-----------P--LAAVVLHSPFTSGMRVAFPDTKTTYC 178 (258)
T ss_pred HHHH----HHHHhhcCCCceEEEEEecCCchhhhhHhhcC-----------C--cceEEEeccchhhhhhhccCcceEEe
Confidence 4444 4444444 456999999999999999999963 4 99999999987644322221
Q ss_pred ccCCh-HHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC---hHHHHHHHHHHHHHhh
Q 025236 175 MEGSR-EATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV---PEEMDEVRNWLTARLE 250 (256)
Q Consensus 175 ~~~~~-~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~ 250 (256)
++... ....+.+++|+|++||++|++++..+.+++++..++ ..+..++.|+||... ++.++.+..|+....+
T Consensus 179 ~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~----~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 179 FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE----KVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred eccccccCcceeccCCEEEEecccCceecccccHHHHHhccc----cCCCcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 11111 224466789999999999999999999999999986 678899999999744 6778888888876554
Q ss_pred h
Q 025236 251 L 251 (256)
Q Consensus 251 ~ 251 (256)
.
T Consensus 255 ~ 255 (258)
T KOG1552|consen 255 S 255 (258)
T ss_pred c
Confidence 3
No 40
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.86 E-value=2.1e-20 Score=151.83 Aligned_cols=183 Identities=13% Similarity=0.145 Sum_probs=118.0
Q ss_pred CceEEEEEccCCCCCCchHH-HhhhcC---CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQ-LLETLP---LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~-~~~~l~---~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
.+|+|||+||++++...|.. +...|+ ..+|+|+++|++|+|.+..... ...++.+.++.
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-----------------~~ytl~~~a~~ 262 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-----------------SLYTLREHLEM 262 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-----------------CcCCHHHHHHH
Confidence 45799999999999988875 345554 3689999999999875432110 11234444444
Q ss_pred HH-HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC-cch----------------
Q 025236 108 VA-NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP-CSR---------------- 169 (256)
Q Consensus 108 l~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---------------- 169 (256)
+. .++.. ....+++++||||||.+++.++.++ |+++++++++++... ...
T Consensus 263 l~~~ll~~-lg~~k~~LVGhSmGG~iAl~~A~~~-----------Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (481)
T PLN03087 263 IERSVLER-YKVKSFHIVAHSLGCILALALAVKH-----------PGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRR 330 (481)
T ss_pred HHHHHHHH-cCCCCEEEEEECHHHHHHHHHHHhC-----------hHhccEEEEECCCccccccchhHHHHHHHHhcccc
Confidence 42 33333 2334899999999999999999976 566666666653210 000
Q ss_pred ------------hh------------------hhh---------ccC-----------ChH-------------------
Q 025236 170 ------------TL------------------KSR---------MEG-----------SRE------------------- 180 (256)
Q Consensus 170 ------------~~------------------~~~---------~~~-----------~~~------------------- 180 (256)
.+ .+. ... ...
T Consensus 331 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l 410 (481)
T PLN03087 331 VWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYL 410 (481)
T ss_pred cCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHH
Confidence 00 000 000 000
Q ss_pred -HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh-HHHHHHHHHHHHH
Q 025236 181 -ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP-EEMDEVRNWLTAR 248 (256)
Q Consensus 181 -~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~ 248 (256)
.....+++|+|+++|++|.++|.+.++.+.+.+ ++.++++++++||..+. +..+.+.+.|.+.
T Consensus 411 ~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-----P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F 475 (481)
T PLN03087 411 DHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-----PRARVKVIDDKDHITIVVGRQKEFARELEEI 475 (481)
T ss_pred HHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-----CCCEEEEeCCCCCcchhhcCHHHHHHHHHHH
Confidence 001146899999999999999999999998888 57999999999998552 3333333333333
No 41
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.86 E-value=3.8e-20 Score=140.39 Aligned_cols=98 Identities=22% Similarity=0.368 Sum_probs=74.5
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
.|+|||+||++++...|..+.+.|+ +|+|+++|++|+|.+.... ..++.+.++.+.+++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~-------------------~~~~~~~~~~l~~~l 60 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAIS-------------------VDGFADVSRLLSQTL 60 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCcc-------------------ccCHHHHHHHHHHHH
Confidence 4689999999999999999999883 6999999999987543110 124566666777777
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCcc-CcceEEEecc
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSV-NLSAIVGLSG 163 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~-~~~~~v~~~~ 163 (256)
+.. ...+++++||||||.+++.++.+. ++ ++++++..++
T Consensus 61 ~~~-~~~~~~lvG~S~Gg~va~~~a~~~-----------~~~~v~~lvl~~~ 100 (242)
T PRK11126 61 QSY-NILPYWLVGYSLGGRIAMYYACQG-----------LAGGLCGLIVEGG 100 (242)
T ss_pred HHc-CCCCeEEEEECHHHHHHHHHHHhC-----------CcccccEEEEeCC
Confidence 654 335999999999999999999964 33 3777666553
No 42
>PLN02578 hydrolase
Probab=99.86 E-value=3.6e-20 Score=147.77 Aligned_cols=179 Identities=18% Similarity=0.096 Sum_probs=117.8
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
.|.||++||++++...|..+...|+ ++|.|+++|++|+|.+.... . ..+.....+.+.+++
T Consensus 86 g~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~---------------~---~~~~~~~a~~l~~~i 146 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDKAL---------------I---EYDAMVWRDQVADFV 146 (354)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCcc---------------c---ccCHHHHHHHHHHHH
Confidence 4678999999999999999999987 57999999999876443110 0 112333344444444
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc----------------------hh
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS----------------------RT 170 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------------~~ 170 (256)
.... .++++++|||+||.+++.+|.+. |.++++++++++..... ..
T Consensus 147 ~~~~-~~~~~lvG~S~Gg~ia~~~A~~~-----------p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 147 KEVV-KEPAVLVGNSLGGFTALSTAVGY-----------PELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHhc-cCCeEEEEECHHHHHHHHHHHhC-----------hHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 4332 24899999999999999999975 66677766654311000 00
Q ss_pred ----------------------hhh----hc---------------------------------------cCChHHHhhc
Q 025236 171 ----------------------LKS----RM---------------------------------------EGSREATRRA 185 (256)
Q Consensus 171 ----------------------~~~----~~---------------------------------------~~~~~~~~~~ 185 (256)
+.. .+ ..........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSK 294 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhc
Confidence 000 00 0000112345
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
.++|+++++|++|.++|.+.++.+.+.+ ++.++++++ +||..+.+..+.+.+-|.+.
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~-----p~a~l~~i~-~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFY-----PDTTLVNLQ-AGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC-----CCCEEEEeC-CCCCccccCHHHHHHHHHHH
Confidence 6899999999999999999888888877 467888885 79998755444444444433
No 43
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=3.9e-20 Score=144.28 Aligned_cols=184 Identities=17% Similarity=0.233 Sum_probs=126.9
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCC-CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLP-NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
..++.||++|||+++...|......|... |+.|+++|++|+|.+... ......++.+.+..+.
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~----------------~~~~~y~~~~~v~~i~ 119 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL----------------PRGPLYTLRELVELIR 119 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCC----------------CCCCceehhHHHHHHH
Confidence 46889999999999999999999999854 599999999987632211 1111245666666666
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEE---EeccCCCc-------------------
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIV---GLSGWLPC------------------- 167 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~------------------- 167 (256)
....+.... ++.++|||+||.+|+.+|+.. |+.++.++ .+.+....
T Consensus 120 ~~~~~~~~~-~~~lvghS~Gg~va~~~Aa~~-----------P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (326)
T KOG1454|consen 120 RFVKEVFVE-PVSLVGHSLGGIVALKAAAYY-----------PETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSAL 187 (326)
T ss_pred HHHHhhcCc-ceEEEEeCcHHHHHHHHHHhC-----------cccccceeeecccccccccCCcchhHHHHhhhhhccHh
Confidence 666554433 699999999999999999965 77777777 33221100
Q ss_pred ---------------------------------chhhhhh--------------------cc---CChHHHhhc-CCCCE
Q 025236 168 ---------------------------------SRTLKSR--------------------ME---GSREATRRA-ASLPI 190 (256)
Q Consensus 168 ---------------------------------~~~~~~~--------------------~~---~~~~~~~~~-~~~p~ 190 (256)
.+..... .. ......... .++|+
T Consensus 188 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pv 267 (326)
T KOG1454|consen 188 ELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPV 267 (326)
T ss_pred hhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCce
Confidence 0000000 00 011112233 34999
Q ss_pred EEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHH----HHHHHHHHH
Q 025236 191 LLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM----DEVRNWLTA 247 (256)
Q Consensus 191 l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~ 247 (256)
|+++|+.|+++|.+.++.+.+.+ +++++++++++||..+.+.. +.+..|+..
T Consensus 268 lii~G~~D~~~p~~~~~~~~~~~-----pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 268 LIIWGDKDQIVPLELAEELKKKL-----PNAELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred EEEEcCcCCccCHHHHHHHHhhC-----CCceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 99999999999999888888888 48999999999999885544 445555544
No 44
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=4.7e-20 Score=142.97 Aligned_cols=181 Identities=15% Similarity=0.137 Sum_probs=116.8
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
.|+|||+||++.+...|..+...|. ++|+|+++|++|+|.+..... .....+++.+.+.. ++
T Consensus 34 ~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~--------------~~~~~~~~~~~~~~---~~ 95 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSG--------------FGYQIDEHARVIGE---FV 95 (286)
T ss_pred CCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCc--------------cccCHHHHHHHHHH---HH
Confidence 5789999999988888999999997 569999999998875432110 01123334444444 33
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC-Cc-----------------chh----
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL-PC-----------------SRT---- 170 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~-----------------~~~---- 170 (256)
... ...+++++||||||.+++.++... |.+++++|++++.. +. ...
T Consensus 96 ~~~-~~~~~~lvG~S~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
T PRK03204 96 DHL-GLDRYLSMGQDWGGPISMAVAVER-----------ADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRR 163 (286)
T ss_pred HHh-CCCCEEEEEECccHHHHHHHHHhC-----------hhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhh
Confidence 332 234899999999999999999865 66677766554321 00 000
Q ss_pred --h-hhhcc-----CC-------------------------------hH--HHh------hcCCCCEEEeecCCCccccc
Q 025236 171 --L-KSRME-----GS-------------------------------RE--ATR------RAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 171 --~-~~~~~-----~~-------------------------------~~--~~~------~~~~~p~l~~~G~~D~~~~~ 203 (256)
+ ...+. .. .. ... ...++|+|+++|++|..+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~ 243 (286)
T PRK03204 164 NFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRP 243 (286)
T ss_pred hHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCc
Confidence 0 00000 00 00 000 01179999999999998865
Q ss_pred h-hhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 204 K-HGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 204 ~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
. ..+.+.+.+ ++.++++++++||+.+.+..+.+.+.|.+.
T Consensus 244 ~~~~~~~~~~i-----p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~ 284 (286)
T PRK03204 244 KTILPRLRATF-----PDHVLVELPNAKHFIQEDAPDRIAAAIIER 284 (286)
T ss_pred HHHHHHHHHhc-----CCCeEEEcCCCcccccccCHHHHHHHHHHh
Confidence 5 456777777 478999999999998866655555555444
No 45
>PRK06489 hypothetical protein; Provisional
Probab=99.86 E-value=1.1e-19 Score=145.40 Aligned_cols=188 Identities=15% Similarity=0.103 Sum_probs=116.3
Q ss_pred ceEEEEEccCCCCCCchH--HHhhhc-------CCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHH
Q 025236 33 QATIVWLHGLSDKGSSWS--QLLETL-------PLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDA 103 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~--~~~~~l-------~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (256)
.|+||++||++++...|. .+.+.+ ..++|+|+++|++|+|.+....... . ......++.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~-~----------~~~~~~~~~~ 137 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL-R----------AAFPRYDYDD 137 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC-C----------CCCCcccHHH
Confidence 578999999999887775 444333 2468999999999998654221000 0 0000123444
Q ss_pred HHHHHHHHHhcCCCCcee-EEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC-Cc------c-h-----
Q 025236 104 SAAHVANLLSTEPADIKL-GIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL-PC------S-R----- 169 (256)
Q Consensus 104 ~~~~l~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~------~-~----- 169 (256)
.++.+...+......+++ +|+||||||++++.+|.+. |++++++|++++.. .. . .
T Consensus 138 ~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~-----------P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~ 206 (360)
T PRK06489 138 MVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKY-----------PDFMDALMPMASQPTEMSGRNWMWRRMLIES 206 (360)
T ss_pred HHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhC-----------chhhheeeeeccCcccccHHHHHHHHHHHHH
Confidence 455554443222232366 4899999999999999976 67777777665421 00 0 0
Q ss_pred -----------------h------hh------------hhccC---------------------------------ChHH
Q 025236 170 -----------------T------LK------------SRMEG---------------------------------SREA 181 (256)
Q Consensus 170 -----------------~------~~------------~~~~~---------------------------------~~~~ 181 (256)
. .. ..... ....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 286 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSP 286 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHH
Confidence 0 00 00000 0001
Q ss_pred HhhcCCCCEEEeecCCCccccchhh--HHHHHHHhhcCCcceEEEEeCCC----CCcCChHHH----HHHHHHHHHH
Q 025236 182 TRRAASLPILLCHGSGDDVVAYKHG--ERSAQTLNSVGFRDLTFRCYNGV----GHYTVPEEM----DEVRNWLTAR 248 (256)
Q Consensus 182 ~~~~~~~p~l~~~G~~D~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~g~----~H~~~~~~~----~~~~~~l~~~ 248 (256)
....+++|+|+++|++|.++|.+.+ +.+.+.+ ++.++++++++ ||..+ +.. +.+.+|+.+.
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-----p~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRV-----KHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-----cCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 2235689999999999999998865 6777777 47899999996 99876 333 4455555543
No 46
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=8.7e-20 Score=136.15 Aligned_cols=201 Identities=19% Similarity=0.231 Sum_probs=141.3
Q ss_pred eeecCC-CCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH
Q 025236 24 HVVRPK-GKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD 102 (256)
Q Consensus 24 ~~~~~~-~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (256)
++..|. ..+.|.||++|+..+-....+.++++|+..||.+++||+..+............+.... .. .........
T Consensus 17 ~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 93 (236)
T COG0412 17 YLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG--LV-ERVDPAEVL 93 (236)
T ss_pred EEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh--hh-ccCCHHHHH
Confidence 333444 34449999999999888899999999999999999999866422111110000010000 00 001112333
Q ss_pred HHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChH
Q 025236 103 ASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSRE 180 (256)
Q Consensus 103 ~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 180 (256)
..+....+++... .+..+|+++|+||||.+++.++.+ .+.+++.+++.|.........
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------------~~~v~a~v~fyg~~~~~~~~~-------- 153 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR------------APEVKAAVAFYGGLIADDTAD-------- 153 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc------------cCCccEEEEecCCCCCCcccc--------
Confidence 4444444444433 345689999999999999999984 238999999998776433211
Q ss_pred HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChH---------------HHHHHHHHH
Q 025236 181 ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPE---------------EMDEVRNWL 245 (256)
Q Consensus 181 ~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~---------------~~~~~~~~l 245 (256)
....++|+|+..|+.|..+|.+....+.+.+.+.+. .+++.+|+++.|.|..+ .++++.+|+
T Consensus 154 --~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~-~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff 230 (236)
T COG0412 154 --APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGV-KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFF 230 (236)
T ss_pred --cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCC-CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999775 79999999998987622 367888898
Q ss_pred HHHhh
Q 025236 246 TARLE 250 (256)
Q Consensus 246 ~~~l~ 250 (256)
++.+.
T Consensus 231 ~~~~~ 235 (236)
T COG0412 231 KRLLG 235 (236)
T ss_pred HHhcc
Confidence 88764
No 47
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=7.3e-20 Score=147.41 Aligned_cols=181 Identities=18% Similarity=0.215 Sum_probs=122.4
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
...|+||++||++++...|..+...|. .+|+|+++|++++|.+.... ...++.+.++.+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~------------------~~~~~~~~~~~~~~ 189 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALA-AGRPVIALDLPGHGASSKAV------------------GAGSLDELAAAVLA 189 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHh-cCCEEEEEcCCCCCCCCCCC------------------CCCCHHHHHHHHHH
Confidence 346799999999999999999999987 45999999999886542110 01234455555555
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc---hh-----------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS---RT----------------- 170 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~----------------- 170 (256)
++... ...+++|+|||+||.+++.+|... +.++++++++++..... ..
T Consensus 190 ~~~~~-~~~~~~lvG~S~Gg~~a~~~a~~~-----------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (371)
T PRK14875 190 FLDAL-GIERAHLVGHSMGGAVALRLAARA-----------PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPV 257 (371)
T ss_pred HHHhc-CCccEEEEeechHHHHHHHHHHhC-----------chheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHH
Confidence 55443 334899999999999999999864 66788888776531100 00
Q ss_pred ----------hh-----hh--------------------cc-----CChHHHhhcCCCCEEEeecCCCccccchhhHHHH
Q 025236 171 ----------LK-----SR--------------------ME-----GSREATRRAASLPILLCHGSGDDVVAYKHGERSA 210 (256)
Q Consensus 171 ----------~~-----~~--------------------~~-----~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~ 210 (256)
.. .. +. ..........++|+|+++|++|.++|.+.++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~ 337 (371)
T PRK14875 258 LELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP 337 (371)
T ss_pred HHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc
Confidence 00 00 00 0001123456899999999999999987654332
Q ss_pred HHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHhh
Q 025236 211 QTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLE 250 (256)
Q Consensus 211 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 250 (256)
+.+++.+++++||....+..+.+.+.|.+.++
T Consensus 338 --------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 338 --------DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred --------CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 25789999999999876665666666655554
No 48
>PRK10162 acetyl esterase; Provisional
Probab=99.85 E-value=1.7e-19 Score=141.39 Aligned_cols=199 Identities=19% Similarity=0.179 Sum_probs=135.9
Q ss_pred ecCCCCCceEEEEEccCC---CCCCchHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccH
Q 025236 26 VRPKGKHQATIVWLHGLS---DKGSSWSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGL 101 (256)
Q Consensus 26 ~~~~~~~~~~vl~~HG~~---~~~~~~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (256)
+.|.....|+||++||+| ++...+..+++.|+. .|+.|+.+|++..+.. ..+...+++
T Consensus 74 y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~------------------~~p~~~~D~ 135 (318)
T PRK10162 74 YYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA------------------RFPQAIEEI 135 (318)
T ss_pred ECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC------------------CCCCcHHHH
Confidence 344445578999999987 345567778888875 5999999999864311 122345667
Q ss_pred HHHHHHHHHHHhcC-CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhh-----h--
Q 025236 102 DASAAHVANLLSTE-PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLK-----S-- 173 (256)
Q Consensus 102 ~~~~~~l~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~-- 173 (256)
...++++.+...+. .+.++|+|+|+|+||.+++.++.+..... ..+..++++++++|+........ .
T Consensus 136 ~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~-----~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~ 210 (318)
T PRK10162 136 VAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQ-----IDCGKVAGVLLWYGLYGLRDSVSRRLLGGVW 210 (318)
T ss_pred HHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcC-----CCccChhheEEECCccCCCCChhHHHhCCCc
Confidence 77777776665442 35569999999999999999987642211 01356788888888654311000 0
Q ss_pred -------------hc-c-----CChH----HH-hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCC
Q 025236 174 -------------RM-E-----GSRE----AT-RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGV 229 (256)
Q Consensus 174 -------------~~-~-----~~~~----~~-~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 229 (256)
.+ . ..+. .. ....-+|+++++|+.|.+. +.++.+.++|++.|+ ++++++++|.
T Consensus 211 ~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv-~v~~~~~~g~ 287 (318)
T PRK10162 211 DGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQ-PCEFKLYPGT 287 (318)
T ss_pred cccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCC-CEEEEEECCC
Confidence 00 0 0000 00 0123479999999999986 678999999999998 8999999999
Q ss_pred CCcCC---------hHHHHHHHHHHHHHhh
Q 025236 230 GHYTV---------PEEMDEVRNWLTARLE 250 (256)
Q Consensus 230 ~H~~~---------~~~~~~~~~~l~~~l~ 250 (256)
.|.+. .+.++.+.+||++.++
T Consensus 288 ~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 288 LHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99764 2346778888888765
No 49
>PRK11071 esterase YqiA; Provisional
Probab=99.85 E-value=7.1e-20 Score=132.81 Aligned_cols=161 Identities=21% Similarity=0.288 Sum_probs=106.2
Q ss_pred eEEEEEccCCCCCCchHH--HhhhcCC--CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 34 ATIVWLHGLSDKGSSWSQ--LLETLPL--PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~--~~~~l~~--~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
|+||++||++++...|.. +...+.. .++.|+++|+++++ + +..+.+.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------------------~---~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------------------A---DAAELLE 52 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------------------H---HHHHHHH
Confidence 579999999999998874 3455543 47999999998531 1 2233444
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhcc------------C
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRME------------G 177 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------------~ 177 (256)
+++... ..++++++|+||||.+++.+|.+. +. .+|++++.....+.+..... -
T Consensus 53 ~l~~~~-~~~~~~lvG~S~Gg~~a~~~a~~~-----------~~---~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (190)
T PRK11071 53 SLVLEH-GGDPLGLVGSSLGGYYATWLSQCF-----------ML---PAVVVNPAVRPFELLTDYLGENENPYTGQQYVL 117 (190)
T ss_pred HHHHHc-CCCCeEEEEECHHHHHHHHHHHHc-----------CC---CEEEECCCCCHHHHHHHhcCCcccccCCCcEEE
Confidence 444432 234899999999999999999864 32 24556654442111110000 0
Q ss_pred -------ChHH--HhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHHHHHHHHHH
Q 025236 178 -------SREA--TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEMDEVRNWLT 246 (256)
Q Consensus 178 -------~~~~--~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 246 (256)
.... .......|++++||++|+++|++.+.++++. ++.++++|++|.+. .+.++.+.+|+.
T Consensus 118 ~~~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~--------~~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 118 ESRHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAA--------CRQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred cHHHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHh--------cceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 0000 1112566889999999999999999988883 35557799999976 344677888764
No 50
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.84 E-value=2.3e-19 Score=143.04 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=124.5
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
..|+||++||++.+...|..++..|+ .+|+|+++|++|+|.+...... .....++...++.+.++
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~--------------~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPG--------------YGFNYTLDEYVSSLESL 190 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCccc--------------ccccCCHHHHHHHHHHH
Confidence 46799999999999999999999997 5899999999998755422100 00112355555566655
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc-----hh----------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS-----RT---------------- 170 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~---------------- 170 (256)
+..... .++.|+|||+||.+++.++.+. |++++++|++++..... ..
T Consensus 191 i~~l~~-~~~~LvG~s~GG~ia~~~a~~~-----------P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~ 258 (383)
T PLN03084 191 IDELKS-DKVSLVVQGYFSPPVVKYASAH-----------PDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQD 258 (383)
T ss_pred HHHhCC-CCceEEEECHHHHHHHHHHHhC-----------hHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcc
Confidence 554322 3899999999999999999865 66677777666542100 00
Q ss_pred -hh-------------------hhccC-----C---------hH-----------HHh-----hcCCCCEEEeecCCCcc
Q 025236 171 -LK-------------------SRMEG-----S---------RE-----------ATR-----RAASLPILLCHGSGDDV 200 (256)
Q Consensus 171 -~~-------------------~~~~~-----~---------~~-----------~~~-----~~~~~p~l~~~G~~D~~ 200 (256)
.. ..+.. . .. ... ..+++|+|+++|+.|.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~ 338 (383)
T PLN03084 259 PLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRW 338 (383)
T ss_pred hHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCC
Confidence 00 00000 0 00 000 13578999999999999
Q ss_pred ccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 201 VAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
++.+.++.+.+.. +.++++++++||.+..+..+.+.+.|.+.+
T Consensus 339 v~~~~~~~~a~~~------~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl 381 (383)
T PLN03084 339 LNYDGVEDFCKSS------QHKLIELPMAGHHVQEDCGEELGGIISGIL 381 (383)
T ss_pred cCHHHHHHHHHhc------CCeEEEECCCCCCcchhCHHHHHHHHHHHh
Confidence 9998777777653 578999999999988666555555555444
No 51
>PLN02511 hydrolase
Probab=99.84 E-value=1.3e-19 Score=145.65 Aligned_cols=190 Identities=14% Similarity=0.151 Sum_probs=119.7
Q ss_pred CCceEEEEEccCCCCCCc-h-HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSS-W-SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~-~-~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
..+|+||++||++++... | ..++..+...||+|+++|++|+|.+..... .++ .....+++..+
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~---~~~------------~~~~~~Dl~~~ 162 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP---QFY------------SASFTGDLRQV 162 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc---CEE------------cCCchHHHHHH
Confidence 357899999999776653 4 346666667899999999999875432111 000 11222333344
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccC--cceEEEeccCCCcc---------------h--
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVN--LSAIVGLSGWLPCS---------------R-- 169 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~---------------~-- 169 (256)
.+.+....+..+++++||||||.+++.++.+. ++. +.+++++++..... .
T Consensus 163 i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~-----------~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~ 231 (388)
T PLN02511 163 VDHVAGRYPSANLYAAGWSLGANILVNYLGEE-----------GENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKAL 231 (388)
T ss_pred HHHHHHHCCCCCEEEEEechhHHHHHHHHHhc-----------CCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHH
Confidence 44444444555899999999999999999875 333 66666665432210 0
Q ss_pred --hhhh-------h-------cc-----C----------------------------ChHHHhhcCCCCEEEeecCCCcc
Q 025236 170 --TLKS-------R-------ME-----G----------------------------SREATRRAASLPILLCHGSGDDV 200 (256)
Q Consensus 170 --~~~~-------~-------~~-----~----------------------------~~~~~~~~~~~p~l~~~G~~D~~ 200 (256)
.+.. . +. . ........+++|+|+++|++|++
T Consensus 232 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi 311 (388)
T PLN02511 232 AKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPI 311 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCc
Confidence 0000 0 00 0 00012345789999999999999
Q ss_pred ccchhh-HHHHHHHhhcCCcceEEEEeCCCCCcCChH----------HHHHHHHHHHHHhhh
Q 025236 201 VAYKHG-ERSAQTLNSVGFRDLTFRCYNGVGHYTVPE----------EMDEVRNWLTARLEL 251 (256)
Q Consensus 201 ~~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----------~~~~~~~~l~~~l~~ 251 (256)
+|.+.. ....+.+ +++++++++++||..+.| ..+.+.+||....+.
T Consensus 312 ~p~~~~~~~~~~~~-----p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 312 APARGIPREDIKAN-----PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCcccCcHhHHhcC-----CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 997754 2333333 479999999999975522 147788899877654
No 52
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=3.1e-19 Score=138.45 Aligned_cols=181 Identities=15% Similarity=0.056 Sum_probs=112.9
Q ss_pred CceEEEEEccCCCCCC-chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGS-SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
..++||++||+.++.. .|..+...+...||.|+++|++|+|.+..... .....++...++.+..
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------------~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDD---------------SDELWTIDYFVDELEE 88 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------------ccccccHHHHHHHHHH
Confidence 3578999999765554 44556666665699999999998875432110 0001234444444444
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh--------------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT-------------------- 170 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------------- 170 (256)
++... ...+++++||||||.+++.++... |.++++++++++.......
T Consensus 89 ~~~~~-~~~~~~liG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (288)
T TIGR01250 89 VREKL-GLDKFYLLGHSWGGMLAQEYALKY-----------GQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIK 156 (288)
T ss_pred HHHHc-CCCcEEEEEeehHHHHHHHHHHhC-----------ccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHH
Confidence 44432 233799999999999999999865 6778888776653221000
Q ss_pred ----------------hhhhc-----c-------------------------------------CChHHHhhcCCCCEEE
Q 025236 171 ----------------LKSRM-----E-------------------------------------GSREATRRAASLPILL 192 (256)
Q Consensus 171 ----------------~~~~~-----~-------------------------------------~~~~~~~~~~~~p~l~ 192 (256)
..... . .........+++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 236 (288)
T TIGR01250 157 RCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLL 236 (288)
T ss_pred HHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEE
Confidence 00000 0 0000122356799999
Q ss_pred eecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHH
Q 025236 193 CHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWL 245 (256)
Q Consensus 193 ~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l 245 (256)
++|++|.+ +++..+.+.+.+ ++.++++++++||+...+..+.+.+-|
T Consensus 237 i~G~~D~~-~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~e~p~~~~~~i 283 (288)
T TIGR01250 237 TVGEFDTM-TPEAAREMQELI-----AGSRLVVFPDGSHMTMIEDPEVYFKLL 283 (288)
T ss_pred EecCCCcc-CHHHHHHHHHhc-----cCCeEEEeCCCCCCcccCCHHHHHHHH
Confidence 99999985 557777777666 367899999999997744433333333
No 53
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.84 E-value=2.9e-19 Score=134.46 Aligned_cols=107 Identities=18% Similarity=0.143 Sum_probs=83.4
Q ss_pred CCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 29 KGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 29 ~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
.....|+|+++||+......|..+...|+..||+|+++|++|-|.+..+. .....++...+..+
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~----------------~~~~Yt~~~l~~di 103 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPP----------------HISEYTIDELVGDI 103 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCC----------------CcceeeHHHHHHHH
Confidence 44568999999999999999999999999999999999999865443321 11234456666666
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
..++.... .++++++||+||+.+|+.+|... |+++.++|.++.
T Consensus 104 ~~lld~Lg-~~k~~lvgHDwGaivaw~la~~~-----------Perv~~lv~~nv 146 (322)
T KOG4178|consen 104 VALLDHLG-LKKAFLVGHDWGAIVAWRLALFY-----------PERVDGLVTLNV 146 (322)
T ss_pred HHHHHHhc-cceeEEEeccchhHHHHHHHHhC-----------hhhcceEEEecC
Confidence 66665543 45999999999999999999976 788888777654
No 54
>PRK07581 hypothetical protein; Validated
Probab=99.84 E-value=4e-19 Score=141.27 Aligned_cols=196 Identities=14% Similarity=0.058 Sum_probs=119.4
Q ss_pred CceEEEEEccCCCCCCchHHHh---hhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLL---ETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~---~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
..|+||++||++++...|..+. +.|...+|+||++|++|+|.+......... +.. ......++.+.+...
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~------~~~~~~~~~~~~~~~ 112 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAP-FNA------ARFPHVTIYDNVRAQ 112 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCC-CCC------CCCCceeHHHHHHHH
Confidence 3467888888887776665543 467667899999999999865432110000 000 001112244444442
Q ss_pred HHHHhcCCCCce-eEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc--------------------
Q 025236 109 ANLLSTEPADIK-LGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC-------------------- 167 (256)
Q Consensus 109 ~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------------- 167 (256)
...+......++ +.|+||||||++++.+|.++ |++++++|++++....
T Consensus 113 ~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~-----------P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (339)
T PRK07581 113 HRLLTEKFGIERLALVVGWSMGAQQTYHWAVRY-----------PDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPA 181 (339)
T ss_pred HHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHC-----------HHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 232222122337 57999999999999999976 5666666655332110
Q ss_pred --------------------------------------------chhh----hhhc---c------------------C-
Q 025236 168 --------------------------------------------SRTL----KSRM---E------------------G- 177 (256)
Q Consensus 168 --------------------------------------------~~~~----~~~~---~------------------~- 177 (256)
.... .... . .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (339)
T PRK07581 182 FNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNP 261 (339)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCc
Confidence 0000 0000 0 0
Q ss_pred ----ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCC-CCCcCCh----HHHHHHHHHHHHH
Q 025236 178 ----SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNG-VGHYTVP----EEMDEVRNWLTAR 248 (256)
Q Consensus 178 ----~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~----~~~~~~~~~l~~~ 248 (256)
........+++|+|+++|++|..+|.+.++.+.+.+ ++.+++++++ +||.... +....+.+|+++.
T Consensus 262 ~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-----p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 262 AYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-----PNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred ccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-----CCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 001123346899999999999999999888888877 4689999998 8998663 3456666777766
Q ss_pred hh
Q 025236 249 LE 250 (256)
Q Consensus 249 l~ 250 (256)
+.
T Consensus 337 ~~ 338 (339)
T PRK07581 337 LA 338 (339)
T ss_pred Hh
Confidence 53
No 55
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.83 E-value=1e-19 Score=134.92 Aligned_cols=169 Identities=14% Similarity=0.155 Sum_probs=107.7
Q ss_pred CCCceEEEEEccCCCCCCchH---HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 30 GKHQATIVWLHGLSDKGSSWS---QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~---~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
.++.|+||++||++++...+. .+.+.+...|+.|++||+++++... ....|+.... ......+..++.+.++
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~i~ 84 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSN----NCWDWFFTHH-RARGTGEVESLHQLID 84 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccC----CCCCCCCccc-cCCCCccHHHHHHHHH
Confidence 457899999999998877665 2444555679999999998764221 1113332211 0111223344444455
Q ss_pred HHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch-hhhhhcc-----CC-h
Q 025236 107 HVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR-TLKSRME-----GS-R 179 (256)
Q Consensus 107 ~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~-----~~-~ 179 (256)
.+.+.. ..+.++++|+|||+||.+++.++.+. +..+++++.+++...... ....... .. .
T Consensus 85 ~~~~~~--~id~~~i~l~G~S~Gg~~a~~~a~~~-----------p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 151 (212)
T TIGR01840 85 AVKANY--SIDPNRVYVTGLSAGGGMTAVLGCTY-----------PDVFAGGASNAGLPYGEASSSISATPQMCTAATAA 151 (212)
T ss_pred HHHHhc--CcChhheEEEEECHHHHHHHHHHHhC-----------chhheEEEeecCCcccccccchhhHhhcCCCCCHH
Confidence 444421 23456999999999999999999865 788999999988653211 0000000 00 0
Q ss_pred H---------HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhc
Q 025236 180 E---------ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSV 216 (256)
Q Consensus 180 ~---------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~ 216 (256)
. .......+|++++||++|.+||++.++.+.+.+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 0 011123455789999999999999999999999875
No 56
>PRK10985 putative hydrolase; Provisional
Probab=99.83 E-value=4.6e-19 Score=139.73 Aligned_cols=191 Identities=17% Similarity=0.140 Sum_probs=118.2
Q ss_pred CCceEEEEEccCCCCCCc--hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSS--WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
..+|+||++||++++... +..+++.|.+.||+|+++|++|+|.+..... ..+ .....+++...++.+
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~---~~~--------~~~~~~D~~~~i~~l 124 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH---RIY--------HSGETEDARFFLRWL 124 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc---ceE--------CCCchHHHHHHHHHH
Confidence 357899999999877543 3458888888999999999998753221100 000 001123344334333
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch-------------------
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR------------------- 169 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------------- 169 (256)
.+..+..+++++||||||.+++.++.+.+ ....+.+++++++.+....
T Consensus 125 ----~~~~~~~~~~~vG~S~GG~i~~~~~~~~~---------~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~ 191 (324)
T PRK10985 125 ----QREFGHVPTAAVGYSLGGNMLACLLAKEG---------DDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLN 191 (324)
T ss_pred ----HHhCCCCCEEEEEecchHHHHHHHHHhhC---------CCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHH
Confidence 33334458999999999998888877541 1123677777766432100
Q ss_pred hhhh------------------hcc----------------------------CChHHHhhcCCCCEEEeecCCCccccc
Q 025236 170 TLKS------------------RME----------------------------GSREATRRAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 170 ~~~~------------------~~~----------------------------~~~~~~~~~~~~p~l~~~G~~D~~~~~ 203 (256)
.+.. ... .........+++|+++++|++|++++.
T Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~ 271 (324)
T PRK10985 192 LLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTH 271 (324)
T ss_pred HHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCCh
Confidence 0000 000 000012345688999999999999998
Q ss_pred hhhHHHHHHHhhcCCcceEEEEeCCCCCcCChH---------HHHHHHHHHHHHhh
Q 025236 204 KHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPE---------EMDEVRNWLTARLE 250 (256)
Q Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~---------~~~~~~~~l~~~l~ 250 (256)
+..+.+.+.. +++++++++++||..+.+ .-+.+.+|+...++
T Consensus 272 ~~~~~~~~~~-----~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 272 EVIPKPESLP-----PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred hhChHHHHhC-----CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 7776654433 368999999999974422 13567788876553
No 57
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=5.9e-19 Score=142.50 Aligned_cols=190 Identities=11% Similarity=0.036 Sum_probs=119.6
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH-HHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD-ASAAHVA 109 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 109 (256)
...|+||++||++.+...|......|+ .+|.|+++|++|+|.+..... ...+.+... ..++.+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~--------------~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALA-SRFRVIAIDQLGWGGSSRPDF--------------TCKSTEETEAWFIDSFE 167 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHH-hCCEEEEECCCCCCCCCCCCc--------------ccccHHHHHHHHHHHHH
Confidence 456899999999998888888888887 469999999999875432110 000111121 2234444
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC--cc-------------------
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP--CS------------------- 168 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~------------------- 168 (256)
+++... ...+++|+||||||++++.+|.+. +..++++|++++.-. ..
T Consensus 168 ~~~~~l-~~~~~~lvGhS~GG~la~~~a~~~-----------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
T PLN02894 168 EWRKAK-NLSNFILLGHSFGGYVAAKYALKH-----------PEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVL 235 (402)
T ss_pred HHHHHc-CCCCeEEEEECHHHHHHHHHHHhC-----------chhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHH
Confidence 444433 334899999999999999999975 555666555543210 00
Q ss_pred -----------------------------------------------hhhhh----hc--------------------cC
Q 025236 169 -----------------------------------------------RTLKS----RM--------------------EG 177 (256)
Q Consensus 169 -----------------------------------------------~~~~~----~~--------------------~~ 177 (256)
..+.+ .. ..
T Consensus 236 ~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
T PLN02894 236 NHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARK 315 (402)
T ss_pred HHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcc
Confidence 00000 00 00
Q ss_pred ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChH----HHHHHHHHHHHHhhhc
Q 025236 178 SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPE----EMDEVRNWLTARLELE 252 (256)
Q Consensus 178 ~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----~~~~~~~~l~~~l~~~ 252 (256)
........+++|+++++|++|.+.+ .....+.+... ..+++++++++||....| ..+.+.+|++..+...
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~----~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMK----VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcC----CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 0001123467999999999998765 54555554442 257899999999987633 3567788888877653
No 58
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=5.8e-19 Score=133.41 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=82.1
Q ss_pred CCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
...+..+|++||+|.....|..-.+.|+. .+.|+++|++|-|.+.-+.+. .+. ...-...++.+.
T Consensus 87 ~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~-----------~d~---~~~e~~fvesiE 151 (365)
T KOG4409|consen 87 SANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFS-----------IDP---TTAEKEFVESIE 151 (365)
T ss_pred ccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCC-----------CCc---ccchHHHHHHHH
Confidence 35678999999999999988888888884 999999999987765543321 111 222336666777
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccC
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGW 164 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~ 164 (256)
++-.+..- .+.+|+|||+||+++..+|++ ||+++..+|+++|+
T Consensus 152 ~WR~~~~L-~KmilvGHSfGGYLaa~YAlK-----------yPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 152 QWRKKMGL-EKMILVGHSFGGYLAAKYALK-----------YPERVEKLILVSPW 194 (365)
T ss_pred HHHHHcCC-cceeEeeccchHHHHHHHHHh-----------ChHhhceEEEeccc
Confidence 77554332 399999999999999999995 58889999988876
No 59
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.83 E-value=1.1e-18 Score=136.76 Aligned_cols=58 Identities=17% Similarity=0.323 Sum_probs=50.6
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-hHHHHHHHHHHHHHh
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-PEEMDEVRNWLTARL 249 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l 249 (256)
++|+|+++|++|.++|.+.++.+.+.+ ++.++++++++||... ++.++.+++|+.+.+
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF-----PEAELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 589999999999999999999998887 4689999999999965 567799999998764
No 60
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=6.3e-19 Score=140.17 Aligned_cols=165 Identities=18% Similarity=0.203 Sum_probs=103.8
Q ss_pred chHHHhh---hcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcCCCCceeEEe
Q 025236 48 SWSQLLE---TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTEPADIKLGIG 124 (256)
Q Consensus 48 ~~~~~~~---~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~ 124 (256)
.|..+.. .|...+|+|+++|++|+|.+.. .. .++...++.+.+++........+.|+
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~-----------------~~---~~~~~~a~dl~~ll~~l~l~~~~~lv 143 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLD-----------------VP---IDTADQADAIALLLDALGIARLHAFV 143 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCC-----------------CC---CCHHHHHHHHHHHHHHcCCCcceEEE
Confidence 5777775 5644689999999998753210 01 12334455555555543333245799
Q ss_pred EeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------h------------------------
Q 025236 125 GFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR----------T------------------------ 170 (256)
Q Consensus 125 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~------------------------ 170 (256)
||||||++++.+|.++ |++++++|++++...... .
T Consensus 144 G~SmGG~vA~~~A~~~-----------P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (343)
T PRK08775 144 GYSYGALVGLQFASRH-----------PARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAML 212 (343)
T ss_pred EECHHHHHHHHHHHHC-----------hHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHH
Confidence 9999999999999976 666777776654211000 0
Q ss_pred -------hhhhccCC------------h-----------------------------HHHhhcCCCCEEEeecCCCcccc
Q 025236 171 -------LKSRMEGS------------R-----------------------------EATRRAASLPILLCHGSGDDVVA 202 (256)
Q Consensus 171 -------~~~~~~~~------------~-----------------------------~~~~~~~~~p~l~~~G~~D~~~~ 202 (256)
+...+... . ......+++|+|+++|++|.++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p 292 (343)
T PRK08775 213 SYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVP 292 (343)
T ss_pred HcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeC
Confidence 00000000 0 00123467899999999999999
Q ss_pred chhhHHHHHHHhhcCCcceEEEEeCC-CCCcCChHHH----HHHHHHHHH
Q 025236 203 YKHGERSAQTLNSVGFRDLTFRCYNG-VGHYTVPEEM----DEVRNWLTA 247 (256)
Q Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~----~~~~~~l~~ 247 (256)
.+.++.+.+.+.. +.+++++++ +||....|.. +.+.+||.+
T Consensus 293 ~~~~~~~~~~i~p----~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 293 LADLVELAEGLGP----RGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred HHHHHHHHHHcCC----CCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 9888888887742 689999985 9999775444 444455543
No 61
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.81 E-value=2.7e-18 Score=133.40 Aligned_cols=208 Identities=16% Similarity=0.125 Sum_probs=123.0
Q ss_pred ceeecC-CCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccC-----CCccccccccCCCCC-CCC
Q 025236 23 THVVRP-KGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFG-----GYPCTAWFDVGDLSE-DGP 95 (256)
Q Consensus 23 ~~~~~~-~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~ 95 (256)
.+..+. ...+.|+||.+||.++....+..... ++..|+.|+.+|.+|+|....+ +.....|.. .+... ...
T Consensus 72 ~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~-~g~~~~~e~ 149 (320)
T PF05448_consen 72 WLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT-RGIDDNPED 149 (320)
T ss_dssp EEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT-TTTTS-TTT
T ss_pred EEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHh-cCccCchHH
Confidence 344444 35678999999999998777666554 4558999999999998822211 011111111 11111 111
Q ss_pred CCcccHHHHHHHHHHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhh
Q 025236 96 DDLEGLDASAAHVANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKS 173 (256)
Q Consensus 96 ~~~~~~~~~~~~l~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 173 (256)
.....+..++-...+.+.. ..+.++|++.|.|+||.+++.+|+. .++++++++..|++.......+
T Consensus 150 ~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL------------d~rv~~~~~~vP~l~d~~~~~~ 217 (320)
T PF05448_consen 150 YYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL------------DPRVKAAAADVPFLCDFRRALE 217 (320)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------------SST-SEEEEESESSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh------------CccccEEEecCCCccchhhhhh
Confidence 1111221222222233333 3456799999999999999999885 5779999999887653221111
Q ss_pred -------------hcc---C---------------ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceE
Q 025236 174 -------------RME---G---------------SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLT 222 (256)
Q Consensus 174 -------------~~~---~---------------~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~ 222 (256)
.+. . +..-....+++|+++..|-.|+++|+......++.+.. +++
T Consensus 218 ~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~----~K~ 293 (320)
T PF05448_consen 218 LRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG----PKE 293 (320)
T ss_dssp HT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S----SEE
T ss_pred cCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC----Cee
Confidence 000 0 01114567899999999999999999999999999975 799
Q ss_pred EEEeCCCCCcCChHH-HHHHHHHHHHH
Q 025236 223 FRCYNGVGHYTVPEE-MDEVRNWLTAR 248 (256)
Q Consensus 223 ~~~~~g~~H~~~~~~-~~~~~~~l~~~ 248 (256)
+.++|..+|...++. .++.++||.++
T Consensus 294 l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 294 LVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp EEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred EEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 999999999998887 78899999874
No 62
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.80 E-value=6.4e-18 Score=134.83 Aligned_cols=115 Identities=19% Similarity=0.151 Sum_probs=69.1
Q ss_pred CceEEEEEccCCCCCC-----------chHHHh---hhcCCCCeEEEeeCCCCCCCcccCCCccccccccCC-CCCCCCC
Q 025236 32 HQATIVWLHGLSDKGS-----------SWSQLL---ETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGD-LSEDGPD 96 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~-----------~~~~~~---~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 96 (256)
..|+||++||++++.. .|..+. ..|...+|.|+++|++|++.+.+... .|..... .... .
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~---~~~~~~~~~~~~--~ 104 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS---SINPGGRPYGSD--F 104 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC---CCCCCCCcCCCC--C
Confidence 3579999999998763 356554 35656899999999999432221110 0000000 0000 0
Q ss_pred CcccHHHHHHHHHHHHhcCCCCce-eEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 97 DLEGLDASAAHVANLLSTEPADIK-LGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
...++.+.++.+.+++... ...+ ++|+||||||.+++.++.+. |.+++++|++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~l-~~~~~~~l~G~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~ 160 (351)
T TIGR01392 105 PLITIRDDVKAQKLLLDHL-GIEQIAAVVGGSMGGMQALEWAIDY-----------PERVRAIVVLAT 160 (351)
T ss_pred CCCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEEcc
Confidence 1123455555555555443 2236 99999999999999999976 555555555543
No 63
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.80 E-value=4.3e-18 Score=131.06 Aligned_cols=183 Identities=14% Similarity=0.122 Sum_probs=111.2
Q ss_pred CceEEEEEccCCC----CCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 32 HQATIVWLHGLSD----KGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 32 ~~~~vl~~HG~~~----~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
.++.||++||+.. +...+..+++.|++.||.|+++|++|+|.+.... ...++..+++..
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-----------------~~~~~~~~d~~~ 87 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-----------------LGFEGIDADIAA 87 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-----------------CCHHHHHHHHHH
Confidence 3456777776542 2234566789999899999999999987543110 112223333334
Q ss_pred HHHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh----------------
Q 025236 108 VANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT---------------- 170 (256)
Q Consensus 108 l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---------------- 170 (256)
+.+.+.+.. ..++++++|||+||.+++.++.. +..++++|++++++.....
T Consensus 88 ~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~------------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T TIGR03100 88 AIDAFREAAPHLRRIVAWGLCDAASAALLYAPA------------DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS 155 (274)
T ss_pred HHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh------------CCCccEEEEECCccCCcccchHHHHHHHHHHHHhC
Confidence 444443322 23479999999999999998763 4679999999987542110
Q ss_pred --h-hhh--------------------c---cC------C---hHHHhhcCCCCEEEeecCCCccccchh-----hHHHH
Q 025236 171 --L-KSR--------------------M---EG------S---REATRRAASLPILLCHGSGDDVVAYKH-----GERSA 210 (256)
Q Consensus 171 --~-~~~--------------------~---~~------~---~~~~~~~~~~p~l~~~G~~D~~~~~~~-----~~~~~ 210 (256)
+ ... . .. . ........++|+++++|+.|...+... +....
T Consensus 156 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~ 235 (274)
T TIGR03100 156 ADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWR 235 (274)
T ss_pred hHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhH
Confidence 0 000 0 00 0 001222457899999999998864211 02333
Q ss_pred HHHhhcCCcceEEEEeCCCCCcCChH-----HHHHHHHHHH
Q 025236 211 QTLNSVGFRDLTFRCYNGVGHYTVPE-----EMDEVRNWLT 246 (256)
Q Consensus 211 ~~l~~~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~ 246 (256)
+.+.. ++++++.+++++|.+..+ ..+.+.+||.
T Consensus 236 ~~l~~---~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 236 GALED---PGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHhhc---CCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 33332 478999999999987532 3456666663
No 64
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=9.4e-18 Score=121.31 Aligned_cols=189 Identities=20% Similarity=0.217 Sum_probs=134.0
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
..++.++++|=.|+++..|..|...+. ..+.++.+++||++..... ...+++...++.+..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp-~~iel~avqlPGR~~r~~e------------------p~~~di~~Lad~la~ 65 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP-ADIELLAVQLPGRGDRFGE------------------PLLTDIESLADELAN 65 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC-chhheeeecCCCcccccCC------------------cccccHHHHHHHHHH
Confidence 456789999999999999999999887 4799999999988533221 125567777777777
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc----------------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS---------------------- 168 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------- 168 (256)
.+.......+..++||||||++|.++|.+...... + ..++...+.--|..
T Consensus 66 el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~------~--p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lg 137 (244)
T COG3208 66 ELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGL------P--PRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLG 137 (244)
T ss_pred HhccccCCCCeeecccchhHHHHHHHHHHHHHcCC------C--cceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhC
Confidence 76643444589999999999999999998643211 1 22333222221100
Q ss_pred ---------hhhhhh----ccCC-------hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCC
Q 025236 169 ---------RTLKSR----MEGS-------REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNG 228 (256)
Q Consensus 169 ---------~~~~~~----~~~~-------~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 228 (256)
..+... ++.+ .........+|+..+.|++|..++.+....+.+..++ ..++..++|
T Consensus 138 G~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~----~f~l~~fdG 213 (244)
T COG3208 138 GTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG----DFTLRVFDG 213 (244)
T ss_pred CCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC----CceEEEecC
Confidence 000000 0000 0002235789999999999999998888778887765 899999998
Q ss_pred CCCcCChHHHHHHHHHHHHHhhh
Q 025236 229 VGHYTVPEEMDEVRNWLTARLEL 251 (256)
Q Consensus 229 ~~H~~~~~~~~~~~~~l~~~l~~ 251 (256)
||++..+..+.++++|.+.++.
T Consensus 214 -gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 -GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred -cceehhhhHHHHHHHHHHHhhh
Confidence 9999999999999999988863
No 65
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.79 E-value=1e-17 Score=154.71 Aligned_cols=194 Identities=19% Similarity=0.254 Sum_probs=124.4
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
..++|||+||++++...|..+...|. .+|+|+++|++|+|.+....... ........+++...+.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~----------~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAK----------ETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccc----------cccccccCCHHHHHHHHHHH
Confidence 46799999999999999999999997 57999999999987653221100 00000112344444555555
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------------- 169 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------- 169 (256)
+... ...++.|+||||||.+++.++.++ |+++++++++++......
T Consensus 1439 l~~l-~~~~v~LvGhSmGG~iAl~~A~~~-----------P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g 1506 (1655)
T PLN02980 1439 IEHI-TPGKVTLVGYSMGARIALYMALRF-----------SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHG 1506 (1655)
T ss_pred HHHh-CCCCEEEEEECHHHHHHHHHHHhC-----------hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhh
Confidence 5443 234899999999999999999865 677777777754311000
Q ss_pred --hh-----h----hhc--------------c-CC------------------hHHHhhcCCCCEEEeecCCCccccchh
Q 025236 170 --TL-----K----SRM--------------E-GS------------------REATRRAASLPILLCHGSGDDVVAYKH 205 (256)
Q Consensus 170 --~~-----~----~~~--------------~-~~------------------~~~~~~~~~~p~l~~~G~~D~~~~~~~ 205 (256)
.+ . ... . .. .......+++|+|+++|++|..++ +.
T Consensus 1507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~ 1585 (1655)
T PLN02980 1507 LEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QI 1585 (1655)
T ss_pred HHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HH
Confidence 00 0 000 0 00 001234567899999999999875 66
Q ss_pred hHHHHHHHhhc-------CCcceEEEEeCCCCCcCChHH----HHHHHHHHHHHh
Q 025236 206 GERSAQTLNSV-------GFRDLTFRCYNGVGHYTVPEE----MDEVRNWLTARL 249 (256)
Q Consensus 206 ~~~~~~~l~~~-------~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l 249 (256)
++++.+.+... +.+.+++++++++||..+.+. .+.+.+||.+.-
T Consensus 1586 a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1586 AQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 67777776531 011268999999999977443 455667776543
No 66
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=3.7e-17 Score=131.52 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=49.8
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeC-CCCCcCChHH----HHHHHHHHHHHh
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYN-GVGHYTVPEE----MDEVRNWLTARL 249 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-g~~H~~~~~~----~~~~~~~l~~~l 249 (256)
..+++|+|+++|++|.++|++.++.+.+.+...+. .+++++++ ++||..+.+. .+.+.+||.+.-
T Consensus 306 ~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~-~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 306 ARIKARFLVVSFTSDWLFPPARSREIVDALLAAGA-DVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred hcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCC-CeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 45688999999999999999999999999975443 45788775 8999866433 456667766543
No 67
>PRK10115 protease 2; Provisional
Probab=99.78 E-value=1.2e-17 Score=142.69 Aligned_cols=212 Identities=15% Similarity=0.096 Sum_probs=142.2
Q ss_pred cccccceeecCC---CCCceEEEEEccCCCCC--CchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCC
Q 025236 18 FEFGRTHVVRPK---GKHQATIVWLHGLSDKG--SSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSE 92 (256)
Q Consensus 18 ~~~~~~~~~~~~---~~~~~~vl~~HG~~~~~--~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (256)
..++..+++++. +.+.|+||+.||.-+.. ..|......|.++|+.|+.++.||.+ ++ ...|...... .
T Consensus 427 ~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~-----g~-G~~w~~~g~~-~ 499 (686)
T PRK10115 427 VEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGG-----EL-GQQWYEDGKF-L 499 (686)
T ss_pred CEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCC-----cc-CHHHHHhhhh-h
Confidence 444444555443 34569999999965543 24666667788899999999999852 22 2356553222 2
Q ss_pred CCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh-
Q 025236 93 DGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL- 171 (256)
Q Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~- 171 (256)
.+..+++|+.+.++++.+. ...+.++++++|.|.||+++..++.+. |+.++++|+..|+......+
T Consensus 500 ~k~~~~~D~~a~~~~Lv~~--g~~d~~rl~i~G~S~GG~l~~~~~~~~-----------Pdlf~A~v~~vp~~D~~~~~~ 566 (686)
T PRK10115 500 KKKNTFNDYLDACDALLKL--GYGSPSLCYGMGGSAGGMLMGVAINQR-----------PELFHGVIAQVPFVDVVTTML 566 (686)
T ss_pred cCCCcHHHHHHHHHHHHHc--CCCChHHeEEEEECHHHHHHHHHHhcC-----------hhheeEEEecCCchhHhhhcc
Confidence 2234455666655555432 234567999999999999999888754 89999999988875533211
Q ss_pred ----------hhhcc-------------CChHHHhhcCCCC-EEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEe-
Q 025236 172 ----------KSRME-------------GSREATRRAASLP-ILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCY- 226 (256)
Q Consensus 172 ----------~~~~~-------------~~~~~~~~~~~~p-~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~- 226 (256)
.+.+. ..+.......+.| +|+++|.+|..||+.++.++..+|++.+. +.+++++
T Consensus 567 ~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~-~~~~vl~~ 645 (686)
T PRK10115 567 DESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT-DDHLLLLC 645 (686)
T ss_pred cCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCC-CCceEEEE
Confidence 01110 1111123345678 67789999999999999999999999887 7777887
Q ss_pred --CCCCCcCCh------HHHHHHHHHHHHHhh
Q 025236 227 --NGVGHYTVP------EEMDEVRNWLTARLE 250 (256)
Q Consensus 227 --~g~~H~~~~------~~~~~~~~~l~~~l~ 250 (256)
+++||.... +.......|+...+.
T Consensus 646 ~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 646 TDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred ecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhC
Confidence 899998431 234455677776664
No 68
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.78 E-value=8e-18 Score=119.28 Aligned_cols=196 Identities=17% Similarity=0.166 Sum_probs=134.9
Q ss_pred ceeecCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCC-CCccc-CCCccccccccCCCCCCCCCCccc
Q 025236 23 THVVRPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTR-PVAIF-GGYPCTAWFDVGDLSEDGPDDLEG 100 (256)
Q Consensus 23 ~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 100 (256)
.|+......++.+|++.-=+|.+..+-...+..++..||.|++||+-.. +.+.. .......|.... +.+.
T Consensus 30 aYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~--------~~~~ 101 (242)
T KOG3043|consen 30 AYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGH--------SPPK 101 (242)
T ss_pred EEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcC--------Cccc
Confidence 3544444444444444444666666688899999999999999997532 22221 111122332211 1222
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChH
Q 025236 101 LDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSRE 180 (256)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 180 (256)
....+..+.++++.+.+..+|+++|++|||.++..+... .+.+.+++++.|.+....
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~------------~~~f~a~v~~hps~~d~~----------- 158 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAK------------DPEFDAGVSFHPSFVDSA----------- 158 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeecc------------chhheeeeEecCCcCChh-----------
Confidence 344455555666666666799999999999999888763 227888888888665433
Q ss_pred HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC---------------hHHHHHHHHHH
Q 025236 181 ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV---------------PEEMDEVRNWL 245 (256)
Q Consensus 181 ~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---------------~~~~~~~~~~l 245 (256)
.....++|+|++.|+.|..+|++....+.+.+++......++.+++|.+|.+. ++.++.++.|+
T Consensus 159 -D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf 237 (242)
T KOG3043|consen 159 -DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWF 237 (242)
T ss_pred -HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHH
Confidence 23456799999999999999999999999999875443357999999999876 23467888999
Q ss_pred HHHhh
Q 025236 246 TARLE 250 (256)
Q Consensus 246 ~~~l~ 250 (256)
++.+.
T Consensus 238 ~~y~~ 242 (242)
T KOG3043|consen 238 KHYLA 242 (242)
T ss_pred HHhhC
Confidence 88763
No 69
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.77 E-value=1.8e-17 Score=120.71 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=143.2
Q ss_pred cccccceeecCCC-CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCC------ccccccccCCC
Q 025236 18 FEFGRTHVVRPKG-KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGY------PCTAWFDVGDL 90 (256)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~------~~~~~~~~~~~ 90 (256)
..+...++.+... .+.|.||-+||+++....|..+...-+ .||.|+.+|.||++.+..++. ..++|......
T Consensus 67 ~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGil 145 (321)
T COG3458 67 ARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGIL 145 (321)
T ss_pred ceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecc
Confidence 3444555555554 688999999999999988877777665 899999999999987643211 12233333222
Q ss_pred CCCCCCCcc----cHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 91 SEDGPDDLE----GLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 91 ~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
......... |+..+++.+.++ ...+..||.+.|.|+||.+++.+++. ..+++++++..|++.
T Consensus 146 D~kd~yyyr~v~~D~~~ave~~~sl--~~vde~Ri~v~G~SqGGglalaaaal------------~~rik~~~~~~Pfl~ 211 (321)
T COG3458 146 DRKDTYYYRGVFLDAVRAVEILASL--DEVDEERIGVTGGSQGGGLALAAAAL------------DPRIKAVVADYPFLS 211 (321)
T ss_pred cCCCceEEeeehHHHHHHHHHHhcc--CccchhheEEeccccCchhhhhhhhc------------Chhhhcccccccccc
Confidence 211222122 233333333222 23556799999999999999998874 577888888888765
Q ss_pred cchhhhhh---------------ccC------------ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCc
Q 025236 167 CSRTLKSR---------------MEG------------SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFR 219 (256)
Q Consensus 167 ~~~~~~~~---------------~~~------------~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~ 219 (256)
......+. .+. +......+++.|+|+..|--|+++|+.....+++++..
T Consensus 212 df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~---- 287 (321)
T COG3458 212 DFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT---- 287 (321)
T ss_pred cchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC----
Confidence 32221111 000 01114567899999999999999999999999999975
Q ss_pred ceEEEEeCCCCCcCChHHH-HHHHHHHHHHh
Q 025236 220 DLTFRCYNGVGHYTVPEEM-DEVRNWLTARL 249 (256)
Q Consensus 220 ~~~~~~~~g~~H~~~~~~~-~~~~~~l~~~l 249 (256)
.+++.+|+--+|.-.+... +.+..|++...
T Consensus 288 ~K~i~iy~~~aHe~~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 288 SKTIEIYPYFAHEGGPGFQSRQQVHFLKILF 318 (321)
T ss_pred CceEEEeeccccccCcchhHHHHHHHHHhhc
Confidence 6788888877898776654 45888887654
No 70
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.76 E-value=8.2e-17 Score=114.23 Aligned_cols=199 Identities=22% Similarity=0.290 Sum_probs=134.4
Q ss_pred CceEEEEEccCCCCCCchHH----HhhhcCCCCeEEEeeCCCCC----CCcccCC----------Cc-cccccccCCCCC
Q 025236 32 HQATIVWLHGLSDKGSSWSQ----LLETLPLPNIKWICPTAPTR----PVAIFGG----------YP-CTAWFDVGDLSE 92 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~----~~~~l~~~g~~vi~~d~~~~----~~~~~~~----------~~-~~~~~~~~~~~~ 92 (256)
.++-||++||+..+...|.. +.+.+.+. +.++.+|.+-- ....... .. .+.|+.....
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~-- 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA-- 80 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc--
Confidence 46789999999999887775 33444433 77888877621 1111111 01 2466655432
Q ss_pred CCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhh
Q 025236 93 DGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLK 172 (256)
Q Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 172 (256)
........+..++.|.+.+.++.+- =+|+|+|+|+.++..++...+.. ......+.++-+|.+||+........
T Consensus 81 -~~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~---~~~~~~P~~kF~v~~SGf~~~~~~~~ 154 (230)
T KOG2551|consen 81 -SFTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKG---LPYVKQPPFKFAVFISGFKFPSKKLD 154 (230)
T ss_pred -ccccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccC---CcccCCCCeEEEEEEecCCCCcchhh
Confidence 1223455777788888888775432 25999999999999888722111 11122456789999999987643333
Q ss_pred hhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHHHHHHHHHHHHhh
Q 025236 173 SRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEMDEVRNWLTARLE 250 (256)
Q Consensus 173 ~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 250 (256)
+.. ....+++|.|.+.|+.|.++|.+.++.+++.+. +..++.-+| ||.+. ....+.+.+||.+.+.
T Consensus 155 ~~~------~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----~a~vl~Hpg-gH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 155 ESA------YKRPLSTPSLHIFGETDTIVPSERSEQLAESFK-----DATVLEHPG-GHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred hhh------hccCCCCCeeEEecccceeecchHHHHHHHhcC-----CCeEEecCC-CccCCCchHHHHHHHHHHHHHHH
Confidence 221 345789999999999999999999999999995 456666665 99976 4567889999988765
Q ss_pred h
Q 025236 251 L 251 (256)
Q Consensus 251 ~ 251 (256)
.
T Consensus 223 ~ 223 (230)
T KOG2551|consen 223 E 223 (230)
T ss_pred h
Confidence 3
No 71
>PRK05855 short chain dehydrogenase; Validated
Probab=99.76 E-value=1.3e-17 Score=142.13 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=66.0
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
..|+|||+||++++...|..+.+.|. .+|.|+++|++|+|.+..... .. ..++.+.++++..+
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~-------------~~---~~~~~~~a~dl~~~ 86 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKR-------------TA---AYTLARLADDFAAV 86 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCc-------------cc---ccCHHHHHHHHHHH
Confidence 46799999999999999999999994 789999999999875532110 00 12244444555555
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHH
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
++......++.|+||||||.+++.++.+
T Consensus 87 i~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 87 IDAVSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHhCCCCcEEEEecChHHHHHHHHHhC
Confidence 5443333369999999999999888765
No 72
>PLN00021 chlorophyllase
Probab=99.76 E-value=3.7e-17 Score=126.97 Aligned_cols=179 Identities=18% Similarity=0.202 Sum_probs=115.4
Q ss_pred eeecCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHH
Q 025236 24 HVVRPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDA 103 (256)
Q Consensus 24 ~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (256)
++.+......|+|||+||++.+...|..+++.|++.||.|+++|+++.. +. ......++..+
T Consensus 43 v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~-----~~-------------~~~~~i~d~~~ 104 (313)
T PLN00021 43 VATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLA-----GP-------------DGTDEIKDAAA 104 (313)
T ss_pred EEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcC-----CC-------------CchhhHHHHHH
Confidence 3334445567999999999999999999999999899999999987521 00 00112334444
Q ss_pred HHHHHHHHHhc------CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh---hhhh
Q 025236 104 SAAHVANLLST------EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT---LKSR 174 (256)
Q Consensus 104 ~~~~l~~~~~~------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~ 174 (256)
.++++.+.+.. ..+.++++++|||+||.+++.+|...+.. ..+.++++++.+.+....... ....
T Consensus 105 ~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~------~~~~~v~ali~ldPv~g~~~~~~~~p~i 178 (313)
T PLN00021 105 VINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV------SLPLKFSALIGLDPVDGTSKGKQTPPPV 178 (313)
T ss_pred HHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc------ccccceeeEEeeccccccccccCCCCcc
Confidence 45555543322 12336899999999999999999865211 113468888988876432210 0000
Q ss_pred ccCChHHHhhcCCCCEEEeecCCCc-----ccc----chhh-HHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 175 MEGSREATRRAASLPILLCHGSGDD-----VVA----YKHG-ERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 175 ~~~~~~~~~~~~~~p~l~~~G~~D~-----~~~----~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
... .........|+|++++..|. .+| .... .++++.++. ++.+.+.++++|.
T Consensus 179 l~~--~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~----~~~~~~~~~~gH~ 240 (313)
T PLN00021 179 LTY--APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA----PAVHFVAKDYGHM 240 (313)
T ss_pred ccc--CcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC----CeeeeeecCCCcc
Confidence 100 00122367999999999763 333 3333 677777764 7888888999996
No 73
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.75 E-value=6.3e-18 Score=119.06 Aligned_cols=190 Identities=16% Similarity=0.150 Sum_probs=133.4
Q ss_pred CCCceEEEEEccCCCCCCchHHHhhhc-CCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQLLETL-PLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~~~~~l-~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
....|+++++|+.+++.......++.+ ..-+..|+.+++||-|.+. |. ...+++.-+.+.+
T Consensus 75 E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~--Gs----------------psE~GL~lDs~av 136 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSE--GS----------------PSEEGLKLDSEAV 136 (300)
T ss_pred cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCC--CC----------------ccccceeccHHHH
Confidence 347899999999999988877766655 3568999999998654332 21 1123344344455
Q ss_pred HHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccC---------
Q 025236 109 ANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEG--------- 177 (256)
Q Consensus 109 ~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------- 177 (256)
.+.+.. ..+..+++|+|.|.||.+|+.+|+.. ..++.+++....|..-++........
T Consensus 137 ldyl~t~~~~dktkivlfGrSlGGAvai~lask~-----------~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~l 205 (300)
T KOG4391|consen 137 LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN-----------SDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLL 205 (300)
T ss_pred HHHHhcCccCCcceEEEEecccCCeeEEEeeccc-----------hhheeeeeeechhccchhhhhheeccchhhHHHHH
Confidence 554433 34567999999999999999999864 56778887766654432211111100
Q ss_pred ------ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc---CChHHHHHHHHHHHHH
Q 025236 178 ------SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY---TVPEEMDEVRNWLTAR 248 (256)
Q Consensus 178 ------~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~---~~~~~~~~~~~~l~~~ 248 (256)
.........+.|.|++.|.+|++||+...+.+++.+.+ ..+++.++|++.|. .....++.+.+|+.+.
T Consensus 206 c~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S---~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 206 CYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPS---RTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEV 282 (300)
T ss_pred HHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCch---hhhhheeCCCCccCceEEeccHHHHHHHHHHHh
Confidence 00112235678999999999999999999999988876 46899999999996 3356789999999887
Q ss_pred hhh
Q 025236 249 LEL 251 (256)
Q Consensus 249 l~~ 251 (256)
-..
T Consensus 283 ~~~ 285 (300)
T KOG4391|consen 283 VKS 285 (300)
T ss_pred ccC
Confidence 653
No 74
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.75 E-value=4.9e-17 Score=115.16 Aligned_cols=164 Identities=17% Similarity=0.243 Sum_probs=107.8
Q ss_pred EEEEccCCCCCC-chHH-HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 36 IVWLHGLSDKGS-SWSQ-LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 36 vl~~HG~~~~~~-~~~~-~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
|+++||++++.. .|.. +.+.+... ++|-.++.. ..++++.+..+.+.+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------------------~P~~~~W~~~l~~~i~ 51 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------------------NPDLDEWVQALDQAID 51 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------------------S--HHHHHHHHHHCCH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------------------CCCHHHHHHHHHHHHh
Confidence 689999987754 5666 56667654 777776552 2346777778877766
Q ss_pred cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc-chhhhhhccCChHHHhhcCCCCEEE
Q 025236 114 TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC-SRTLKSRMEGSREATRRAASLPILL 192 (256)
Q Consensus 114 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~ 192 (256)
.. +.+++|+|||+|+..++.++.. ....+++++++++|+.+. .....................|.++
T Consensus 52 ~~--~~~~ilVaHSLGc~~~l~~l~~----------~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~v 119 (171)
T PF06821_consen 52 AI--DEPTILVAHSLGCLTALRWLAE----------QSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIV 119 (171)
T ss_dssp C---TTTEEEEEETHHHHHHHHHHHH----------TCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEE
T ss_pred hc--CCCeEEEEeCHHHHHHHHHHhh----------cccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEE
Confidence 53 3379999999999999999942 237899999999999764 2222222222222223344567799
Q ss_pred eecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHH---HHHHHHHHH
Q 025236 193 CHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEE---MDEVRNWLT 246 (256)
Q Consensus 193 ~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 246 (256)
+.+++|+++|++.++.+.+.+ +.+++.++++||+...+. +..+.+.|+
T Consensus 120 iaS~nDp~vp~~~a~~~A~~l------~a~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 120 IASDNDPYVPFERAQRLAQRL------GAELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EEETTBSSS-HHHHHHHHHHH------T-EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EEcCCCCccCHHHHHHHHHHc------CCCeEECCCCCCcccccCCCchHHHHHHhc
Confidence 999999999999999999999 689999999999866443 344444443
No 75
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.75 E-value=9.1e-18 Score=124.02 Aligned_cols=183 Identities=23% Similarity=0.315 Sum_probs=102.8
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcC----CCCeEEEeeCCCCCC-----Cc---------ccCCCccccccccCCCCCC
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLP----LPNIKWICPTAPTRP-----VA---------IFGGYPCTAWFDVGDLSED 93 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~----~~g~~vi~~d~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~ 93 (256)
+++.||++||+++|+.-|+.....|. +.++.++.+|.+..- .. .......++|+.....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~--- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD--- 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S----
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC---
Confidence 46789999999999998887555443 238999999876542 11 0112244577664322
Q ss_pred CCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhh
Q 025236 94 GPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKS 173 (256)
Q Consensus 94 ~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 173 (256)
.....++.+.++.+.+.+.+..+ =.+|+|||+||.+|..++......... .....++.+|+++++.+......+
T Consensus 80 -~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~---~~~~~~kf~V~~sg~~p~~~~~~~ 153 (212)
T PF03959_consen 80 -DHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPD---GAHPPFKFAVFISGFPPPDPDYQE 153 (212)
T ss_dssp -SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST-----T----SEEEEES----EEE-GTT
T ss_pred -cccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhccc---ccCCCceEEEEEcccCCCchhhhh
Confidence 23356688888888888877533 467999999999999988765322110 024567899999999987654333
Q ss_pred hccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 174 RMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 174 ~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
.+ ....+++|+|.++|++|.+++.+.++.+.+.+.. ..+++..+| ||.+.
T Consensus 154 ~~------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 154 LY------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDP----DARVIEHDG-GHHVP 203 (212)
T ss_dssp TT--------TT---EEEEEEETT-SSS-HHHHHHHHHHHHH----HEEEEEESS-SSS--
T ss_pred hh------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccC----CcEEEEECC-CCcCc
Confidence 32 2345689999999999999999999999999964 277888886 99866
No 76
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.74 E-value=1.6e-16 Score=111.96 Aligned_cols=169 Identities=16% Similarity=0.197 Sum_probs=112.3
Q ss_pred ceEEEEEccCCCCCCc--hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSS--WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
.-+++++||+-++++. ...++.++.+.|+.++.+|++|.|.+...-+ .+ .....++++..+.+
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-------~G--------n~~~eadDL~sV~q 97 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-------YG--------NYNTEADDLHSVIQ 97 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-------cC--------cccchHHHHHHHHH
Confidence 4589999999988774 4458899999999999999999876552211 11 01112233334444
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh-------------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL------------------- 171 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------------------- 171 (256)
.+... ...--+++|||-||-+++.++.+. +. +.-+|-++|-+.....+
T Consensus 98 ~~s~~-nr~v~vi~gHSkGg~Vvl~ya~K~-----------~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid 164 (269)
T KOG4667|consen 98 YFSNS-NRVVPVILGHSKGGDVVLLYASKY-----------HD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFID 164 (269)
T ss_pred HhccC-ceEEEEEEeecCccHHHHHHHHhh-----------cC-chheEEcccccchhcchhhhhcccHHHHHHhCCcee
Confidence 43331 112346889999999999999965 22 44445554433322111
Q ss_pred -----------------hhhccCC--hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 172 -----------------KSRMEGS--REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 172 -----------------~~~~~~~--~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
.+.+..+ +.......++|+|-+||..|.+||.+.++++++.+ ++.++.++||++|.
T Consensus 165 ~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i-----~nH~L~iIEgADHn 239 (269)
T KOG4667|consen 165 VGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKII-----PNHKLEIIEGADHN 239 (269)
T ss_pred cCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhc-----cCCceEEecCCCcC
Confidence 1111111 11122346799999999999999999999999999 46899999999998
Q ss_pred CC
Q 025236 233 TV 234 (256)
Q Consensus 233 ~~ 234 (256)
+.
T Consensus 240 yt 241 (269)
T KOG4667|consen 240 YT 241 (269)
T ss_pred cc
Confidence 76
No 77
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.74 E-value=9.4e-17 Score=126.02 Aligned_cols=195 Identities=21% Similarity=0.247 Sum_probs=116.2
Q ss_pred ccceeecCCCCCceEEEEEccCCCCCCchHHH-hhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcc
Q 025236 21 GRTHVVRPKGKHQATIVWLHGLSDKGSSWSQL-LETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLE 99 (256)
Q Consensus 21 ~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~-~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (256)
...+..++.+++.|+||++-|.-+...++..+ .+.+..+|+.++++|.||.|.+.. |. .. .+.
T Consensus 178 ~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~-------~~----l~----~D~- 241 (411)
T PF06500_consen 178 PGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK-------WP----LT----QDS- 241 (411)
T ss_dssp EEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-------T-----S-----S-C-
T ss_pred EEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-------CC----CC----cCH-
Confidence 33455566677889999999988888776654 567888999999999998875431 10 00 111
Q ss_pred cHHHHHHHHHHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc---------
Q 025236 100 GLDASAAHVANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS--------- 168 (256)
Q Consensus 100 ~~~~~~~~l~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------- 168 (256)
......+.+++.. .++..||+++|.|+||+.|.++|... +.+++++|+.++.....
T Consensus 242 --~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----------~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 242 --SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----------DPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp --CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----------TTT-SEEEEES---SCGGH-HHHHTT
T ss_pred --HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----------ccceeeEeeeCchHhhhhccHHHHhc
Confidence 1223344444433 34667999999999999999998743 78999999998853210
Q ss_pred --hhhh----hhc--------------c---CChHHH--hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEE
Q 025236 169 --RTLK----SRM--------------E---GSREAT--RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTF 223 (256)
Q Consensus 169 --~~~~----~~~--------------~---~~~~~~--~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 223 (256)
..+. ..+ . -..+.. .....+|+|.+.|++|+++|.+..+.+...-. +.+.
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~-----~gk~ 383 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST-----DGKA 383 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT-----T-EE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC-----CCce
Confidence 0000 000 0 000111 24567899999999999999887755544332 4566
Q ss_pred EEeCCCC-CcCChHHHHHHHHHHHHHh
Q 025236 224 RCYNGVG-HYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 224 ~~~~g~~-H~~~~~~~~~~~~~l~~~l 249 (256)
..++... |.-.+..+..+.+||++.|
T Consensus 384 ~~~~~~~~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 384 LRIPSKPLHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp EEE-SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCccccchHHHHHHHHHHHHHhc
Confidence 6666433 7777888999999999875
No 78
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.72 E-value=1.7e-16 Score=126.52 Aligned_cols=183 Identities=15% Similarity=0.127 Sum_probs=116.1
Q ss_pred CceEEEEEccCCCCCCc-----hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH-HHH
Q 025236 32 HQATIVWLHGLSDKGSS-----WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD-ASA 105 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~-----~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 105 (256)
.+++||++||...+... +..+++.|.+.||.|+++|+++++.+.. ....+++. +.+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~------------------~~~~~d~~~~~~ 122 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR------------------YLTLDDYINGYI 122 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh------------------cCCHHHHHHHHH
Confidence 34569999997544332 3578999998999999999986542210 01122222 223
Q ss_pred HHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------
Q 025236 106 AHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------- 169 (256)
Q Consensus 106 ~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------- 169 (256)
..+.+.+.+..+..+++++||||||.+++.++... +.++++++++++.+....
T Consensus 123 ~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~-----------~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 123 DKCVDYICRTSKLDQISLLGICQGGTFSLCYAALY-----------PDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred HHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhC-----------chheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 33333333334445899999999999999998864 455666666554322100
Q ss_pred -------------------------hh---h-------------------hhccCCh-----------------------
Q 025236 170 -------------------------TL---K-------------------SRMEGSR----------------------- 179 (256)
Q Consensus 170 -------------------------~~---~-------------------~~~~~~~----------------------- 179 (256)
.+ . .......
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g 271 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLING 271 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCC
Confidence 00 0 0000000
Q ss_pred -------HHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-------hHHHHHHHHHH
Q 025236 180 -------EATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-------PEEMDEVRNWL 245 (256)
Q Consensus 180 -------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l 245 (256)
......+++|+++++|++|.++|++.++.+.+.+.. .+++++++++ ||... .+.++.+.+||
T Consensus 272 ~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~---~~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl 347 (350)
T TIGR01836 272 EVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS---EDYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWL 347 (350)
T ss_pred eeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC---CCeEEEEcCC-CCEEEEECchhHhhhhHHHHHHH
Confidence 001234688999999999999999999999888764 3578888885 88632 34568888898
Q ss_pred HH
Q 025236 246 TA 247 (256)
Q Consensus 246 ~~ 247 (256)
.+
T Consensus 348 ~~ 349 (350)
T TIGR01836 348 QA 349 (350)
T ss_pred Hh
Confidence 75
No 79
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.72 E-value=5e-15 Score=118.54 Aligned_cols=206 Identities=13% Similarity=0.043 Sum_probs=123.5
Q ss_pred CCceEEEEEccCCCCCCc-------------hHHHh---hhcCCCCeEEEeeCCCCCCCcccCCCccccccccCC--CCC
Q 025236 31 KHQATIVWLHGLSDKGSS-------------WSQLL---ETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGD--LSE 92 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~-------------~~~~~---~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~--~~~ 92 (256)
.+.++||++|+++++... |..+. +.+--..|-||++|..|.+.+.++.++.+...+... ...
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345899999999886421 44332 234456799999999988764433111111111100 000
Q ss_pred CC-CCCcccHHHHHHHHHHHHhcCCCCceeE-EeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc--
Q 025236 93 DG-PDDLEGLDASAAHVANLLSTEPADIKLG-IGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS-- 168 (256)
Q Consensus 93 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 168 (256)
.. .....++.+.++.+..++... .-.++. ++||||||++++.+|.+. |++++.+|++++.....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~l-gi~~~~~vvG~SmGG~ial~~a~~~-----------P~~v~~lv~ia~~~~~~~~ 201 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSL-GIARLHAVMGPSMGGMQAQEWAVHY-----------PHMVERMIGVIGNPQNDAW 201 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEEecCCCCChh
Confidence 00 112245666666666666543 233665 999999999999999976 66666666664321100
Q ss_pred ------------------------------------------------hhhhhhccC-----------------------
Q 025236 169 ------------------------------------------------RTLKSRMEG----------------------- 177 (256)
Q Consensus 169 ------------------------------------------------~~~~~~~~~----------------------- 177 (256)
..+...+..
T Consensus 202 ~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~ 281 (389)
T PRK06765 202 TSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEIN 281 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHH
Confidence 000000000
Q ss_pred --------------------------------ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEE
Q 025236 178 --------------------------------SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRC 225 (256)
Q Consensus 178 --------------------------------~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 225 (256)
........+++|+|+++|+.|.++|.+.++.+.+.+...+. ++++++
T Consensus 282 ~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~-~a~l~~ 360 (389)
T PRK06765 282 KATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK-YAEVYE 360 (389)
T ss_pred HHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC-CeEEEE
Confidence 00112235689999999999999999999999999875443 689999
Q ss_pred eCC-CCCcCChHHHHHHHHHHHHHh
Q 025236 226 YNG-VGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 226 ~~g-~~H~~~~~~~~~~~~~l~~~l 249 (256)
+++ +||..+.+..+.+.+-|.+.+
T Consensus 361 I~s~~GH~~~le~p~~~~~~I~~FL 385 (389)
T PRK06765 361 IESINGHMAGVFDIHLFEKKIYEFL 385 (389)
T ss_pred ECCCCCcchhhcCHHHHHHHHHHHH
Confidence 985 899976444444443333333
No 80
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.71 E-value=1.3e-15 Score=115.31 Aligned_cols=184 Identities=10% Similarity=0.058 Sum_probs=115.1
Q ss_pred CCCCceEEEEEccCCCCCC----chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 29 KGKHQATIVWLHGLSDKGS----SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 29 ~~~~~~~vl~~HG~~~~~~----~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
..+++|+||++||++.... .|..+++.|++.||.|+.+|++|+|.+..... ......+.++
T Consensus 21 ~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~---------------~~~~~~~~~D 85 (266)
T TIGR03101 21 AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA---------------AARWDVWKED 85 (266)
T ss_pred CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc---------------cCCHHHHHHH
Confidence 3445789999999987543 45567889988999999999999875431100 0122333444
Q ss_pred HHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhh---------c
Q 025236 105 AAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSR---------M 175 (256)
Q Consensus 105 ~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------~ 175 (256)
+..+.+++.+. ...+++|+||||||.+++.++.+. +..++++|++++.......+.+. .
T Consensus 86 v~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~-----------p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~ 153 (266)
T TIGR03101 86 VAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPL-----------AAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRL 153 (266)
T ss_pred HHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhC-----------ccccceEEEeccccchHHHHHHHHHHHHHHHhc
Confidence 44444455443 245899999999999999998864 77888999998875532222110 0
Q ss_pred cCCh----H-----------------------------HH---hhcCCCCEEEeecCCCcc-ccchhhHHHHHHHhhcCC
Q 025236 176 EGSR----E-----------------------------AT---RRAASLPILLCHGSGDDV-VAYKHGERSAQTLNSVGF 218 (256)
Q Consensus 176 ~~~~----~-----------------------------~~---~~~~~~p~l~~~G~~D~~-~~~~~~~~~~~~l~~~~~ 218 (256)
.... . .. ......+++++.-..+.- -......++.+.+++.|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 233 (266)
T TIGR03101 154 GGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGV 233 (266)
T ss_pred cccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCC
Confidence 0000 0 00 001244677776643221 122455689999999999
Q ss_pred cceEEEEeCCCCCcCChHHHHHH
Q 025236 219 RDLTFRCYNGVGHYTVPEEMDEV 241 (256)
Q Consensus 219 ~~~~~~~~~g~~H~~~~~~~~~~ 241 (256)
.++...++|- =++....+.++
T Consensus 234 -~v~~~~~~~~-~~~~~~~~~~~ 254 (266)
T TIGR03101 234 -EVTVDLVPGP-AFWQTQEIEEA 254 (266)
T ss_pred -eEeeeecCCc-hhhcchhhhHh
Confidence 9999999986 33333333333
No 81
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.70 E-value=2.7e-15 Score=116.30 Aligned_cols=192 Identities=15% Similarity=0.114 Sum_probs=137.6
Q ss_pred CCceEEEEEccCCC-----CCCchHHHhhhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 31 KHQATIVWLHGLSD-----KGSSWSQLLETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 31 ~~~~~vl~~HG~~~-----~~~~~~~~~~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
+..|+|||+||+|. +...|..++.+++ ..+..|+.+|+|..+.. ..+...+|...+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh------------------~~Pa~y~D~~~A 149 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH------------------PFPAAYDDGWAA 149 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC------------------CCCccchHHHHH
Confidence 46799999999874 2445777888874 57899999999875422 233446677777
Q ss_pred HHHHHH--HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhh--------
Q 025236 105 AAHVAN--LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSR-------- 174 (256)
Q Consensus 105 ~~~l~~--~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------- 174 (256)
+.++.+ ++....+.+||+|+|-|.||.+|..++.+..+.. ..+.++++.|++.|++.........
T Consensus 150 l~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-----~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~ 224 (336)
T KOG1515|consen 150 LKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-----LSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS 224 (336)
T ss_pred HHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-----CCCcceEEEEEEecccCCCCCCCHHHHHhhcCC
Confidence 888877 6777778889999999999999999999864322 2367899999999986522111110
Q ss_pred -------------------c-cCC------hH-----HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEE
Q 025236 175 -------------------M-EGS------RE-----ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTF 223 (256)
Q Consensus 175 -------------------~-~~~------~~-----~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 223 (256)
. ... .. ......-.|+|++.++.|.+. +.+..+.++|++.|+ ++++
T Consensus 225 ~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv-~v~~ 301 (336)
T KOG1515|consen 225 PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV-EVTL 301 (336)
T ss_pred cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCC-eEEE
Confidence 0 000 00 001122356999999999988 888999999999999 8889
Q ss_pred EEeCCCCCcCC---------hHHHHHHHHHHHHH
Q 025236 224 RCYNGVGHYTV---------PEEMDEVRNWLTAR 248 (256)
Q Consensus 224 ~~~~g~~H~~~---------~~~~~~~~~~l~~~ 248 (256)
..++++.|.+. .+.++.+.+||++.
T Consensus 302 ~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 302 IHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 99999999754 23456777777653
No 82
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=2.7e-15 Score=113.29 Aligned_cols=196 Identities=12% Similarity=0.144 Sum_probs=124.4
Q ss_pred cccccceeecCCCCCceEEEEEccCCCCCCchHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCC
Q 025236 18 FEFGRTHVVRPKGKHQATIVWLHGLSDKGSSWSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPD 96 (256)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (256)
+.|+..+ ...+....|+++++||.-+++.+|..+.+.|+. -+..++++|.|.||.+..-. ..
T Consensus 38 l~y~~~~-~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~----------------~h 100 (315)
T KOG2382|consen 38 LAYDSVY-SSENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT----------------VH 100 (315)
T ss_pred cceeeee-cccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc----------------cc
Confidence 4555422 333446789999999999999999999999984 46899999999987554211 12
Q ss_pred CcccHHHHHHHHHHHHhcCCCCceeEEeEeCchh-HHHHHHHHHhhhccCCCCCCCccCcceEEEe--cc-CCC------
Q 025236 97 DLEGLDASAAHVANLLSTEPADIKLGIGGFSMGA-AIALYSATCRILGQYGNGNPYSVNLSAIVGL--SG-WLP------ 166 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~--~~-~~~------ 166 (256)
+.+.+.+++..+.+.........++.|+|||||| .+++..+.. .|..+..+|.. +| ..+
T Consensus 101 ~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~-----------~p~~~~rliv~D~sP~~~~~~~~e~ 169 (315)
T KOG2382|consen 101 NYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLK-----------KPDLIERLIVEDISPGGVGRSYGEY 169 (315)
T ss_pred CHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHh-----------cCcccceeEEEecCCccCCcccchH
Confidence 2455666666666555433334589999999999 444444433 24444433332 12 100
Q ss_pred -----------cc------------------------hhhhhhcc----------------------C------ChHHHh
Q 025236 167 -----------CS------------------------RTLKSRME----------------------G------SREATR 183 (256)
Q Consensus 167 -----------~~------------------------~~~~~~~~----------------------~------~~~~~~ 183 (256)
.. ..+...+. . ......
T Consensus 170 ~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~ 249 (315)
T KOG2382|consen 170 RELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED 249 (315)
T ss_pred HHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc
Confidence 00 00000000 0 000011
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHH----HHHHHHHH
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM----DEVRNWLT 246 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~ 246 (256)
.....|+|+++|.++..++.+.-..+.+.+ +.+++++++++||+++.|.. +.+.+|+.
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f-----p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIF-----PNVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhc-----cchheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 445789999999999999999888888888 57999999999999885544 44555543
No 83
>PLN02872 triacylglycerol lipase
Probab=99.68 E-value=2.4e-16 Score=126.06 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=48.7
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc--C-C----hHHHHHHHHHHHHHhhh
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY--T-V----PEEMDEVRNWLTARLEL 251 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~--~-~----~~~~~~~~~~l~~~l~~ 251 (256)
++|+++++|++|.+++++.++.+.+.+.. ..+++.+++.+|. + . .+..+.+++|+++..+.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS----KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC----ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 57999999999999999988888888853 3688889999995 2 2 33468899999876553
No 84
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.67 E-value=3.6e-15 Score=109.17 Aligned_cols=165 Identities=19% Similarity=0.250 Sum_probs=103.8
Q ss_pred CceEEEEEccCCCCCCchHHHh--hhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLL--ETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~--~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
+.|+||++||.+++...+.... ..++ ..||.|+.|+..... .......|+. ........+...+...++.+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~----~~~~cw~w~~--~~~~~g~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRA----NPQGCWNWFS--DDQQRGGGDVAFIAALVDYV 88 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccC----CCCCcccccc--cccccCccchhhHHHHHHhH
Confidence 5799999999999988766522 2344 578999999865321 1112223443 12222222333444444444
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch--------hhhhhccCChH
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR--------TLKSRMEGSRE 180 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~ 180 (256)
... ...+.+||++.|+|.||+++..++.. +|+.|+++..+++...... .+.......+.
T Consensus 89 ~~~--~~iD~~RVyv~G~S~Gg~ma~~la~~-----------~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~ 155 (220)
T PF10503_consen 89 AAR--YNIDPSRVYVTGLSNGGMMANVLACA-----------YPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPA 155 (220)
T ss_pred hhh--cccCCCceeeEEECHHHHHHHHHHHh-----------CCccceEEEeecccccccccCcccHHHHhhCCCCCChH
Confidence 332 23566799999999999999999985 4999999888877532110 00000001110
Q ss_pred H-------HhhcCCCCEEEeecCCCccccchhhHHHHHHHhh
Q 025236 181 A-------TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNS 215 (256)
Q Consensus 181 ~-------~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~ 215 (256)
. .......|++++||+.|..|.+..+.++.+++..
T Consensus 156 ~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 156 AAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred HHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 0 0012346999999999999999999988888865
No 85
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.66 E-value=1.2e-14 Score=114.22 Aligned_cols=175 Identities=18% Similarity=0.115 Sum_probs=119.5
Q ss_pred CCceEEEEEccCCCCC---Cch-HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 31 KHQATIVWLHGLSDKG---SSW-SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~---~~~-~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
.+.|+||++||+|... ... ......+...|+.|+.+|++..+.. ..+...+++.+++.
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~------------------~~p~~~~d~~~a~~ 138 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH------------------PFPAALEDAYAAYR 138 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC------------------CCCchHHHHHHHHH
Confidence 3579999999987543 334 3344555578999999999865322 22344666777777
Q ss_pred HHHHHHhc-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------
Q 025236 107 HVANLLST-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------- 169 (256)
Q Consensus 107 ~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------- 169 (256)
++.+...+ ..+.++|+++|+|.||++++.++...... ......+.+.+++++....
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~-------~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~ 211 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR-------GLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDA 211 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc-------CCCCceEEEEEecccCCcccccchhhcCCccccCH
Confidence 77766543 34567999999999999999999875321 1234566777777654321
Q ss_pred -----hhhhhccC------C----hHHHh-hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcC
Q 025236 170 -----TLKSRMEG------S----REATR-RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYT 233 (256)
Q Consensus 170 -----~~~~~~~~------~----~~~~~-~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 233 (256)
.+...+.. . +.... ...-+|+++++|+.|.+.+ .++.+.+++++.|. .+++..++|+.|.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv-~~~~~~~~g~~H~f 288 (312)
T COG0657 212 AAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGV-PVELRVYPGMIHGF 288 (312)
T ss_pred HHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCC-eEEEEEeCCcceec
Confidence 00000000 0 00000 1115799999999999996 88999999999998 89999999999976
No 86
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.66 E-value=5.1e-15 Score=111.67 Aligned_cols=195 Identities=18% Similarity=0.195 Sum_probs=118.4
Q ss_pred CCCCCceEEEEEccCCCCCC-chH-HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 28 PKGKHQATIVWLHGLSDKGS-SWS-QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 28 ~~~~~~~~vl~~HG~~~~~~-~~~-~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
|....+|.||.+||..++.+ .|. .+.+.+.++||.++++++||++.+....... ......+++
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~---------------yh~G~t~D~ 134 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRL---------------YHSGETEDI 134 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcce---------------ecccchhHH
Confidence 45567799999999866554 333 4788888999999999999986444321111 011122445
Q ss_pred HHHHHHHhcCCCCceeEEeEeCchh-HHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc-----------------
Q 025236 106 AHVANLLSTEPADIKLGIGGFSMGA-AIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC----------------- 167 (256)
Q Consensus 106 ~~l~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------- 167 (256)
.++.+.+.......++..+|+|+|| +++..++.+.. ...+.+.+.+|..+..
T Consensus 135 ~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~----------d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~ 204 (345)
T COG0429 135 RFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGD----------DLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYS 204 (345)
T ss_pred HHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhcc----------CcccceeeeeeCHHHHHHHHHHhcCchhhhhhH
Confidence 5555555555666699999999999 55555555421 2223343333322110
Q ss_pred ------------------------c--------hhhhhh-----------------c-cCChHHHhhcCCCCEEEeecCC
Q 025236 168 ------------------------S--------RTLKSR-----------------M-EGSREATRRAASLPILLCHGSG 197 (256)
Q Consensus 168 ------------------------~--------~~~~~~-----------------~-~~~~~~~~~~~~~p~l~~~G~~ 197 (256)
. +.+.+. + ..........+.+|+||+|+.+
T Consensus 205 r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~D 284 (345)
T COG0429 205 RYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKD 284 (345)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCC
Confidence 0 000000 0 0001114456789999999999
Q ss_pred CccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc-CC------h--HHHHHHHHHHHHHhhh
Q 025236 198 DDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY-TV------P--EEMDEVRNWLTARLEL 251 (256)
Q Consensus 198 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~-~~------~--~~~~~~~~~l~~~l~~ 251 (256)
|++++.+...+...... +++.+.+-+-+||. +. + -..+.+.+|+...++.
T Consensus 285 DP~~~~~~iP~~~~~~n----p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 285 DPFMPPEVIPKLQEMLN----PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCCCChhhCCcchhcCC----CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 99999876655554432 47888888888995 22 1 1246788888877653
No 87
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.66 E-value=5.1e-15 Score=102.72 Aligned_cols=172 Identities=19% Similarity=0.185 Sum_probs=114.3
Q ss_pred CCCceEEEEEccC---CCCCCc--hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 30 GKHQATIVWLHGL---SDKGSS--WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 30 ~~~~~~vl~~HG~---~~~~~~--~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
.+..|+.|.+|-. |++.++ ...+++.|.+.||.++.+|+++-|.+. |. | ..+.-..+|...+
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~--G~-----f------D~GiGE~~Da~aa 91 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQ--GE-----F------DNGIGELEDAAAA 91 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeeccccccccc--Cc-----c------cCCcchHHHHHHH
Confidence 4678899999873 444443 345788888999999999998755433 21 1 1112234455555
Q ss_pred HHHHHHHHhcCCCCce-eEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHh
Q 025236 105 AAHVANLLSTEPADIK-LGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATR 183 (256)
Q Consensus 105 ~~~l~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 183 (256)
++++.+ ..+..+ ..|.|+|+|+++++.+|.+. +.....+..++.....+ ....
T Consensus 92 ldW~~~----~hp~s~~~~l~GfSFGa~Ia~~la~r~------------~e~~~~is~~p~~~~~d----------fs~l 145 (210)
T COG2945 92 LDWLQA----RHPDSASCWLAGFSFGAYIAMQLAMRR------------PEILVFISILPPINAYD----------FSFL 145 (210)
T ss_pred HHHHHh----hCCCchhhhhcccchHHHHHHHHHHhc------------ccccceeeccCCCCchh----------hhhc
Confidence 555543 333334 48899999999999999974 33445555555443111 1123
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh---HHHHHHHHHHH
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP---EEMDEVRNWLT 246 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~---~~~~~~~~~l~ 246 (256)
.....|.++++|+.|+++......++.+.. +.+++.+++++|++.. +..+.+.+|+.
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~------~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQESI------KITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhhcCC------CCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 455779999999999998877665555552 6899999999999884 34567777774
No 88
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.65 E-value=1.1e-15 Score=113.45 Aligned_cols=171 Identities=19% Similarity=0.177 Sum_probs=109.5
Q ss_pred EEEEccCCCCC---CchHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 36 IVWLHGLSDKG---SSWSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 36 vl~~HG~~~~~---~~~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
||++||+|... .....++..++. .|+.|+.+|++..+. ...+...+++.++++++.+.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~------------------~~~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE------------------APFPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT------------------SSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc------------------ccccccccccccceeeeccc
Confidence 79999987643 344556666664 799999999986421 11222355556666665554
Q ss_pred Hhc-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc-c---hhhh--hhccC-------
Q 025236 112 LST-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC-S---RTLK--SRMEG------- 177 (256)
Q Consensus 112 ~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~---~~~~--~~~~~------- 177 (256)
..+ ..+.++|+|+|+|.||++++.++...... ....++++++++|+... . .... .....
T Consensus 63 ~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~-------~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~ 135 (211)
T PF07859_consen 63 ADKLGIDPERIVLIGDSAGGHLALSLALRARDR-------GLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAP 135 (211)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------TTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHH
T ss_pred cccccccccceEEeecccccchhhhhhhhhhhh-------cccchhhhhcccccccchhccccccccccccccccccccc
Confidence 322 25567999999999999999999875321 12348899999997543 1 1110 00000
Q ss_pred ----------------ChH---HH--hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 178 ----------------SRE---AT--RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 178 ----------------~~~---~~--~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
.+. .. ....-+|+++++|+.|.++ +.++.+.++|++.|. ++++++++|..|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv-~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 136 KIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGV-DVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT--EEEEEEETTEETTGG
T ss_pred ccccccccccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCC-CEEEEEECCCeEEee
Confidence 000 00 1112459999999999886 678999999999998 999999999999763
No 89
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.64 E-value=1.7e-14 Score=103.22 Aligned_cols=158 Identities=20% Similarity=0.289 Sum_probs=100.5
Q ss_pred EEEEccCCCCCCchHH--HhhhcCCC--CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 36 IVWLHGLSDKGSSWSQ--LLETLPLP--NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 36 vl~~HG~~~~~~~~~~--~~~~l~~~--g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
|+++||+.++....+. +.+.+++. ...+.+++++. ....++..+.++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-----------------------------~p~~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-----------------------------FPEEAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-----------------------------CHHHHHHHHHHH
Confidence 7999999998876554 45555543 35677776652 134445666666
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCC------------h
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGS------------R 179 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------~ 179 (256)
+.+..+. .+.|+|.||||+.|..++.+. .+++ |++.|.+.....+...+... .
T Consensus 53 i~~~~~~-~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~ 117 (187)
T PF05728_consen 53 IEELKPE-NVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTE 117 (187)
T ss_pred HHhCCCC-CeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceech
Confidence 6654443 599999999999999998854 2333 66666554333222221110 0
Q ss_pred H---------HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHHHHHHHHH
Q 025236 180 E---------ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEMDEVRNWL 245 (256)
Q Consensus 180 ~---------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 245 (256)
. ........++++++++.|++++++.+ .+.++ .+..++.+|.+|.+. .+.+..+++|+
T Consensus 118 ~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~-----~~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 118 EHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYR-----GCAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred HhhhhcceEeccccCCCccEEEEEecCCcccCHHHH---HHHhc-----CceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 0 01122346899999999999998544 34443 344455677799976 56678888886
No 90
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.64 E-value=6.7e-15 Score=108.76 Aligned_cols=175 Identities=20% Similarity=0.199 Sum_probs=114.9
Q ss_pred ceEEEEEccCCCCCCc-hHHHhh-------hcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 33 QATIVWLHGLSDKGSS-WSQLLE-------TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~-~~~~~~-------~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
.|.|||+||.|..+.. ...+.. ...+.++-|++|.+.. .....+ .....-+...
T Consensus 191 ~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~----------------if~d~e--~~t~~~l~~~ 252 (387)
T COG4099 191 YPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNP----------------IFADSE--EKTLLYLIEK 252 (387)
T ss_pred ccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccc----------------cccccc--cccchhHHHH
Confidence 3999999999876654 222222 2224556677775421 000011 1112234455
Q ss_pred HHHHHHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHH
Q 025236 105 AAHVANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREAT 182 (256)
Q Consensus 105 ~~~l~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 182 (256)
++.+.+.+.. ..+.+||+++|.|+||+.++.++.+. |+.+++++.++|--..... .
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf-----------PdfFAaa~~iaG~~d~v~l-----------v 310 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF-----------PDFFAAAVPIAGGGDRVYL-----------V 310 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC-----------chhhheeeeecCCCchhhh-----------h
Confidence 5555545544 35668999999999999999999854 9999999999985543211 2
Q ss_pred hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeC-------CCCCcCC---hHHHHHHHHHHHHH
Q 025236 183 RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYN-------GVGHYTV---PEEMDEVRNWLTAR 248 (256)
Q Consensus 183 ~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------g~~H~~~---~~~~~~~~~~l~~~ 248 (256)
....+.|+.++|+.+|.++|.+.++-+++.+++.+. ++++..+. |..|.-. --....+++||.++
T Consensus 311 ~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~-kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~Q 385 (387)
T COG4099 311 RTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDR-KVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLKQ 385 (387)
T ss_pred hhhccCceEEEEecCCCccccCcceeehHHHHhhcc-ccchhhhhhccccccccCCCCcceeecCCHHHHHHHHhc
Confidence 345578999999999999999999999999988765 55554443 4444321 22346788888653
No 91
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=1.7e-14 Score=123.95 Aligned_cols=201 Identities=15% Similarity=0.143 Sum_probs=130.4
Q ss_pred CCCceEEEEEccCCCCCCc----hHHHhh-hcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 30 GKHQATIVWLHGLSDKGSS----WSQLLE-TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~----~~~~~~-~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
+++-|+|+..||+.++... -..+.. .+...|+.|+.+|.||.+.- |...+.+ -...-+..+.+|...+
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~---G~~~~~~----~~~~lG~~ev~D~~~~ 595 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGY---GWDFRSA----LPRNLGDVEVKDQIEA 595 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCc---chhHHHH----hhhhcCCcchHHHHHH
Confidence 4567999999998763221 111222 45678999999999875311 1110000 0111122344555555
Q ss_pred HHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCc-cCcceEEEeccCCCcc--hh-hhhhc-----
Q 025236 105 AAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYS-VNLSAIVGLSGWLPCS--RT-LKSRM----- 175 (256)
Q Consensus 105 ~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~-~~~~~----- 175 (256)
+..+.+.. ..+.+||.|+|+|.||++++.++... + ..+++.++++|..... .. ..+.+
T Consensus 596 ~~~~~~~~--~iD~~ri~i~GwSyGGy~t~~~l~~~-----------~~~~fkcgvavaPVtd~~~yds~~terymg~p~ 662 (755)
T KOG2100|consen 596 VKKVLKLP--FIDRSRVAIWGWSYGGYLTLKLLESD-----------PGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPS 662 (755)
T ss_pred HHHHHhcc--cccHHHeEEeccChHHHHHHHHhhhC-----------cCceEEEEEEecceeeeeeecccccHhhcCCCc
Confidence 55555443 45667999999999999999999853 4 4456668887754321 00 00000
Q ss_pred -------cCChHHHhhcCCCC-EEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-----hHHHHHHH
Q 025236 176 -------EGSREATRRAASLP-ILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-----PEEMDEVR 242 (256)
Q Consensus 176 -------~~~~~~~~~~~~~p-~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~ 242 (256)
...........+.| .|++||+.|..|+.+++..+.+.|+..|+ ++++.++|+.+|.+. ......+.
T Consensus 663 ~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv-~~~~~vypde~H~is~~~~~~~~~~~~~ 741 (755)
T KOG2100|consen 663 ENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV-PFRLLVYPDENHGISYVEVISHLYEKLD 741 (755)
T ss_pred cccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC-ceEEEEeCCCCcccccccchHHHHHHHH
Confidence 00111122334444 59999999999999999999999999999 699999999999976 33468899
Q ss_pred HHHHHHhhh
Q 025236 243 NWLTARLEL 251 (256)
Q Consensus 243 ~~l~~~l~~ 251 (256)
.|+.+++..
T Consensus 742 ~~~~~~~~~ 750 (755)
T KOG2100|consen 742 RFLRDCFGS 750 (755)
T ss_pred HHHHHHcCc
Confidence 999977754
No 92
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.59 E-value=2.1e-14 Score=100.40 Aligned_cols=186 Identities=13% Similarity=0.058 Sum_probs=118.8
Q ss_pred CCCceEEEEEccC-CCCCCchHHHhhhcCCC-CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 30 GKHQATIVWLHGL-SDKGSSWSQLLETLPLP-NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 30 ~~~~~~vl~~HG~-~~~~~~~~~~~~~l~~~-g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
+.....|+++.|. |+...+|..+...+... .+++++.|.+|-|.+..+.. ....+-+..+.+.
T Consensus 39 G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R---------------kf~~~ff~~Da~~ 103 (277)
T KOG2984|consen 39 GHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER---------------KFEVQFFMKDAEY 103 (277)
T ss_pred CCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc---------------cchHHHHHHhHHH
Confidence 3333467778885 66667888877666533 49999999998765553321 1223334444444
Q ss_pred HHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC--Cc------------------
Q 025236 108 VANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL--PC------------------ 167 (256)
Q Consensus 108 l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~------------------ 167 (256)
..++++.. +..++.++|+|-||..|+..|++. ++.+..++.+.+.. ..
T Consensus 104 avdLM~aL-k~~~fsvlGWSdGgiTalivAak~-----------~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r 171 (277)
T KOG2984|consen 104 AVDLMEAL-KLEPFSVLGWSDGGITALIVAAKG-----------KEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSAR 171 (277)
T ss_pred HHHHHHHh-CCCCeeEeeecCCCeEEEEeeccC-----------hhhhhhheeecccceecchhHHHHhchHHHhhhhhh
Confidence 44444432 233899999999999999999864 66676666554321 00
Q ss_pred --------------chhhhhhc---c--------CChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceE
Q 025236 168 --------------SRTLKSRM---E--------GSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLT 222 (256)
Q Consensus 168 --------------~~~~~~~~---~--------~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~ 222 (256)
...+.... . ..=......+++|+||+||+.|+.++..++--+.+.. +-.+
T Consensus 172 ~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-----~~a~ 246 (277)
T KOG2984|consen 172 GRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-----SLAK 246 (277)
T ss_pred hcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc-----ccce
Confidence 00000000 0 0001144568999999999999999998886666655 3689
Q ss_pred EEEeCCCCCcCC----hHHHHHHHHHHHH
Q 025236 223 FRCYNGVGHYTV----PEEMDEVRNWLTA 247 (256)
Q Consensus 223 ~~~~~g~~H~~~----~~~~~~~~~~l~~ 247 (256)
+.+.|..+|.+. .+.-+.+.+|+++
T Consensus 247 ~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 247 VEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred EEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 999999999876 3334566677754
No 93
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.59 E-value=3.1e-14 Score=106.90 Aligned_cols=153 Identities=21% Similarity=0.224 Sum_probs=101.7
Q ss_pred eEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 61 IKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 61 ~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
|.|+++|.||.|.+... |. ........+++.+++..+.+.+.. .++.++||||||.+++.+|...
T Consensus 1 f~vi~~d~rG~g~S~~~------~~-----~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~vG~S~Gg~~~~~~a~~~ 65 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH------WD-----PDFPDYTTDDLAADLEALREALGI----KKINLVGHSMGGMLALEYAAQY 65 (230)
T ss_dssp EEEEEEECTTSTTSSSC------CG-----SGSCTHCHHHHHHHHHHHHHHHTT----SSEEEEEETHHHHHHHHHHHHS
T ss_pred CEEEEEeCCCCCCCCCC------cc-----CCcccccHHHHHHHHHHHHHHhCC----CCeEEEEECCChHHHHHHHHHC
Confidence 68999999998765521 00 000112344555555555554433 2699999999999999999975
Q ss_pred hhccCCCCCCCccCcceEEEeccC--CCc---chh-----hhh-------------------------------------
Q 025236 141 ILGQYGNGNPYSVNLSAIVGLSGW--LPC---SRT-----LKS------------------------------------- 173 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~---~~~-----~~~------------------------------------- 173 (256)
|+++++++++++. .+. ... +..
T Consensus 66 -----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (230)
T PF00561_consen 66 -----------PERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFL 134 (230)
T ss_dssp -----------GGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred -----------chhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchh
Confidence 8899999999884 000 000 000
Q ss_pred ------h-cc--------------------CChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEe
Q 025236 174 ------R-ME--------------------GSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCY 226 (256)
Q Consensus 174 ------~-~~--------------------~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 226 (256)
. .. .........+++|+++++|+.|.++|++.+..+.+.+ ++.+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-----~~~~~~~~ 209 (230)
T PF00561_consen 135 KQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-----PNSQLVLI 209 (230)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-----TTEEEEEE
T ss_pred hccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence 0 00 0001133458899999999999999999998888777 47999999
Q ss_pred CCCCCcCChHHHHHHHHH
Q 025236 227 NGVGHYTVPEEMDEVRNW 244 (256)
Q Consensus 227 ~g~~H~~~~~~~~~~~~~ 244 (256)
+++||....+..+.+.+-
T Consensus 210 ~~~GH~~~~~~~~~~~~~ 227 (230)
T PF00561_consen 210 EGSGHFAFLEGPDEFNEI 227 (230)
T ss_dssp TTCCSTHHHHSHHHHHHH
T ss_pred CCCChHHHhcCHHhhhhh
Confidence 999999775555444443
No 94
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.58 E-value=4.8e-14 Score=126.28 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=51.7
Q ss_pred hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEE-EEeCCCCCcC-------ChHHHHHHHHHHHHHhhh
Q 025236 183 RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTF-RCYNGVGHYT-------VPEEMDEVRNWLTARLEL 251 (256)
Q Consensus 183 ~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~H~~-------~~~~~~~~~~~l~~~l~~ 251 (256)
...+++|+|+++|++|.++|++.++.+.+.+ ++.++ .+++++||.. ..+.+..+.+||.++-..
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i-----~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASVRGIRRAA-----PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-----CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 3456789999999999999999999998877 35666 5778899983 356789999999986543
No 95
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.56 E-value=9.7e-14 Score=101.90 Aligned_cols=94 Identities=19% Similarity=0.210 Sum_probs=67.6
Q ss_pred CCCceEEEEEccCCCCCCchHHHhhhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQLLETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~~~~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
....|+++++||+|.++-.|..++..+. .-..+|+++|+|+||.+..... .....+++..++..+
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e--------------~dlS~eT~~KD~~~~ 136 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE--------------DDLSLETMSKDFGAV 136 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh--------------hhcCHHHHHHHHHHH
Confidence 4567899999999999999999998886 3468889999999987664321 112334444333333
Q ss_pred H-HHHhcCCCCceeEEeEeCchhHHHHHHHHH
Q 025236 109 A-NLLSTEPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 109 ~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
. .+..+.. .+|+|+||||||.+|...|..
T Consensus 137 i~~~fge~~--~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 137 IKELFGELP--PQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred HHHHhccCC--CceEEEeccccchhhhhhhhh
Confidence 2 3333333 389999999999999888875
No 96
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.55 E-value=1.2e-12 Score=88.24 Aligned_cols=175 Identities=20% Similarity=0.171 Sum_probs=112.9
Q ss_pred eeecCCCCCceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccH
Q 025236 24 HVVRPKGKHQATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGL 101 (256)
Q Consensus 24 ~~~~~~~~~~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (256)
...+|.+....+||+-||.|.+.+ .+...+..|+..|+.|..++++..-....+.. ..... ..++
T Consensus 5 ~~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r--------kPp~~-----~~t~ 71 (213)
T COG3571 5 FLFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR--------KPPPG-----SGTL 71 (213)
T ss_pred cccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC--------CCcCc-----cccC
Confidence 345667777779999999988765 46678899999999999999876422221110 00111 1112
Q ss_pred H-HHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEec-cCCCcchhhhhhccCCh
Q 025236 102 D-ASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLS-GWLPCSRTLKSRMEGSR 179 (256)
Q Consensus 102 ~-~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~ 179 (256)
. +.+..+.++ .......+.++-|+||||-++..++... ...+.++++++ |+.|.-+. ++..
T Consensus 72 ~~~~~~~~aql-~~~l~~gpLi~GGkSmGGR~aSmvade~-----------~A~i~~L~clgYPfhppGKP-----e~~R 134 (213)
T COG3571 72 NPEYIVAIAQL-RAGLAEGPLIIGGKSMGGRVASMVADEL-----------QAPIDGLVCLGYPFHPPGKP-----EQLR 134 (213)
T ss_pred CHHHHHHHHHH-HhcccCCceeeccccccchHHHHHHHhh-----------cCCcceEEEecCccCCCCCc-----ccch
Confidence 1 222222222 2333344899999999999999998864 44588988885 44433221 1112
Q ss_pred HHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 180 EATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 180 ~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
.......++|+||++|+.|++-..+.. ....-+ +.++++++++++|..-
T Consensus 135 t~HL~gl~tPtli~qGtrD~fGtr~~V---a~y~ls---~~iev~wl~~adHDLk 183 (213)
T COG3571 135 TEHLTGLKTPTLITQGTRDEFGTRDEV---AGYALS---DPIEVVWLEDADHDLK 183 (213)
T ss_pred hhhccCCCCCeEEeecccccccCHHHH---HhhhcC---CceEEEEeccCccccc
Confidence 224566789999999999998765533 222222 4799999999999754
No 97
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.55 E-value=1.6e-13 Score=113.15 Aligned_cols=179 Identities=11% Similarity=0.096 Sum_probs=109.0
Q ss_pred eeecCCC--CCceEEEEEccCCCCCCchH-----HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCC
Q 025236 24 HVVRPKG--KHQATIVWLHGLSDKGSSWS-----QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPD 96 (256)
Q Consensus 24 ~~~~~~~--~~~~~vl~~HG~~~~~~~~~-----~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (256)
+.|.|.. ..++.||++|++......+. .+++.|.++||.|+++|++++|.+...- .+ ...
T Consensus 177 i~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~---------ddY 243 (532)
T TIGR01838 177 IQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TF---------DDY 243 (532)
T ss_pred EEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----Ch---------hhh
Confidence 3444442 25678999999876655443 6999999999999999999865332100 00 001
Q ss_pred CcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHH----HHHHhhhccCCCCCCCccCcceEEEeccCCCcch---
Q 025236 97 DLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALY----SATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR--- 169 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--- 169 (256)
..+.+.++++.+.+. ....++.++||||||.++.. ++... .+.++++++++...+++..
T Consensus 244 ~~~~i~~al~~v~~~----~g~~kv~lvG~cmGGtl~a~ala~~aa~~----------~~~rv~slvll~t~~Df~~~G~ 309 (532)
T TIGR01838 244 IRDGVIAALEVVEAI----TGEKQVNCVGYCIGGTLLSTALAYLAARG----------DDKRIKSATFFTTLLDFSDPGE 309 (532)
T ss_pred HHHHHHHHHHHHHHh----cCCCCeEEEEECcCcHHHHHHHHHHHHhC----------CCCccceEEEEecCcCCCCcch
Confidence 112334444444333 33458999999999998633 23321 1445666666644322100
Q ss_pred ---------------------------------------hhhh-----hcc---------------C-------------
Q 025236 170 ---------------------------------------TLKS-----RME---------------G------------- 177 (256)
Q Consensus 170 ---------------------------------------~~~~-----~~~---------------~------------- 177 (256)
.+.. .+. .
T Consensus 310 l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr 389 (532)
T TIGR01838 310 LGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLR 389 (532)
T ss_pred hhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHH
Confidence 0000 000 0
Q ss_pred ----------------ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 178 ----------------SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 178 ----------------~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
........+++|+|+++|++|.++|.+.++.+.+.+. ..+..+++++||...
T Consensus 390 ~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 390 NLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAG 457 (532)
T ss_pred HHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchH
Confidence 0001334578999999999999999999988887774 456778888999643
No 98
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.53 E-value=3e-13 Score=100.43 Aligned_cols=179 Identities=17% Similarity=0.136 Sum_probs=115.3
Q ss_pred eeecCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHH
Q 025236 24 HVVRPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDA 103 (256)
Q Consensus 24 ~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (256)
++++.....-|+|||+||+......|..+.+++++.||.||.+|..... ......+.+.+.+
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~------------------~~~~~~~~~~~~~ 69 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIG------------------GPDDTDEVASAAE 69 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccC------------------CCCcchhHHHHHH
Confidence 3444455668999999999977777899999999999999999964311 0112233555666
Q ss_pred HHHHHHHHHhcC------CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh--h-hhh
Q 025236 104 SAAHVANLLSTE------PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT--L-KSR 174 (256)
Q Consensus 104 ~~~~l~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~-~~~ 174 (256)
.++++.+-+... .+-++++|+|||.||-++..++..... .....++++++++.|.-..... . ...
T Consensus 70 vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~------~~~~~~~~ali~lDPVdG~~~~~~~~P~v 143 (259)
T PF12740_consen 70 VIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNAS------SSLDLRFSALILLDPVDGMSKGSQTEPPV 143 (259)
T ss_pred HHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcc------cccccceeEEEEeccccccccccCCCCcc
Confidence 666666544332 244699999999999999999986411 0114578999999886532111 0 001
Q ss_pred ccCChHHHhhcCCCCEEEeecCCCcc---------ccch-hhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 175 MEGSREATRRAASLPILLCHGSGDDV---------VAYK-HGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 175 ~~~~~~~~~~~~~~p~l~~~G~~D~~---------~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
+.. .........|++++...-+.. .|.. .-++|++.++. +.-.++..+.||.
T Consensus 144 ~~~--~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~----p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 144 LTY--TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP----PSWHFVAKDYGHM 205 (259)
T ss_pred ccC--cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC----CEEEEEeCCCCch
Confidence 111 011223458999998777642 2222 23577777764 5566666889996
No 99
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.53 E-value=2.7e-12 Score=95.16 Aligned_cols=106 Identities=24% Similarity=0.204 Sum_probs=78.2
Q ss_pred CCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 28 PKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 28 ~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
|.+.+..+||-+||..++..+|..+...|.+.|+++|.+++||.+.+..+ +....+-.+....
T Consensus 30 ~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~-----------------~~~~~~n~er~~~ 92 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGY-----------------PDQQYTNEERQNF 92 (297)
T ss_pred CCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCC-----------------cccccChHHHHHH
Confidence 44566779999999999999999999999999999999999986544311 1112223344445
Q ss_pred HHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 108 VANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 108 l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
+.+++....-..+++++|||.|+-.|+.++..+ +..+++++++
T Consensus 93 ~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~-------------~~~g~~lin~ 135 (297)
T PF06342_consen 93 VNALLDELGIKGKLIFLGHSRGCENALQLAVTH-------------PLHGLVLINP 135 (297)
T ss_pred HHHHHHHcCCCCceEEEEeccchHHHHHHHhcC-------------ccceEEEecC
Confidence 555555544446999999999999999999853 3457766654
No 100
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.53 E-value=1.4e-13 Score=101.65 Aligned_cols=138 Identities=23% Similarity=0.323 Sum_probs=82.5
Q ss_pred ccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC------------
Q 025236 99 EGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP------------ 166 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------ 166 (256)
+.+++++++|.+. ...+.++|+|+|.|.||-+|+.+|... + .++++|+++|..-
T Consensus 4 Eyfe~Ai~~L~~~--p~v~~~~Igi~G~SkGaelALllAs~~-----------~-~i~avVa~~ps~~~~~~~~~~~~~~ 69 (213)
T PF08840_consen 4 EYFEEAIDWLKSH--PEVDPDKIGIIGISKGAELALLLASRF-----------P-QISAVVAISPSSVVFQGIGFYRDSS 69 (213)
T ss_dssp HHHHHHHHHHHCS--TTB--SSEEEEEETHHHHHHHHHHHHS-----------S-SEEEEEEES--SB--SSEEEETTE-
T ss_pred HHHHHHHHHHHhC--CCCCCCCEEEEEECHHHHHHHHHHhcC-----------C-CccEEEEeCCceeEecchhcccCCC
Confidence 3455555555443 123446999999999999999999974 3 7888888766311
Q ss_pred -------cch-hh----------hhhc-------cCChHHHhhcCCCCEEEeecCCCccccc-hhhHHHHHHHhhcCCc-
Q 025236 167 -------CSR-TL----------KSRM-------EGSREATRRAASLPILLCHGSGDDVVAY-KHGERSAQTLNSVGFR- 219 (256)
Q Consensus 167 -------~~~-~~----------~~~~-------~~~~~~~~~~~~~p~l~~~G~~D~~~~~-~~~~~~~~~l~~~~~~- 219 (256)
... .. .... .........+++.|+|+++|++|...|. +.++.+.++|++++.+
T Consensus 70 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~ 149 (213)
T PF08840_consen 70 KPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPH 149 (213)
T ss_dssp -EE----B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT---
T ss_pred ccCCcCCcChhhceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCC
Confidence 000 00 0000 0001123455789999999999999986 4557888899988874
Q ss_pred ceEEEEeCCCCCcCC--------------------------------hHHHHHHHHHHHHHhh
Q 025236 220 DLTFRCYNGVGHYTV--------------------------------PEEMDEVRNWLTARLE 250 (256)
Q Consensus 220 ~~~~~~~~g~~H~~~--------------------------------~~~~~~~~~~l~~~l~ 250 (256)
+.+++.|+++||.+. .+.++.+++||+++|.
T Consensus 150 ~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 150 NVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 589999999999643 1247899999999875
No 101
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.52 E-value=1.3e-13 Score=109.98 Aligned_cols=176 Identities=15% Similarity=0.190 Sum_probs=85.0
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcc--c-CCCc------------cccccccCCCCCCCC
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAI--F-GGYP------------CTAWFDVGDLSEDGP 95 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~--~-~~~~------------~~~~~~~~~~~~~~~ 95 (256)
.+.|+|||.||.+++...|..++..|+.+||.|+++|++..-... . .... ...|...........
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 568999999999999999999999999999999999998642111 1 0000 011211111100000
Q ss_pred CC--ccc-------HHHHHHHHHHHHhc------------------CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCC
Q 025236 96 DD--LEG-------LDASAAHVANLLST------------------EPADIKLGIGGFSMGAAIALYSATCRILGQYGNG 148 (256)
Q Consensus 96 ~~--~~~-------~~~~~~~l~~~~~~------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 148 (256)
.. ... +..+++.+.++-.. ..+.++|+++|||+||..++.++.+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~--------- 248 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQ--------- 248 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhh---------
Confidence 00 001 12222222221100 0123589999999999999998876
Q ss_pred CCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCC
Q 025236 149 NPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNG 228 (256)
Q Consensus 149 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 228 (256)
..++++.|.+.+|...... . .....+.|+|+++.+. .. .......+.+ +.+.+ ....++.+.|
T Consensus 249 ---d~r~~~~I~LD~W~~Pl~~---~-------~~~~i~~P~L~InSe~-f~-~~~~~~~~~~-~~~~~-~~~~~~ti~g 311 (379)
T PF03403_consen 249 ---DTRFKAGILLDPWMFPLGD---E-------IYSKIPQPLLFINSES-FQ-WWENIFRMKK-VISNN-KESRMLTIKG 311 (379)
T ss_dssp ----TT--EEEEES---TTS-G---G-------GGGG--S-EEEEEETT-T---HHHHHHHHT-T--TT-S-EEEEEETT
T ss_pred ---ccCcceEEEeCCcccCCCc---c-------cccCCCCCEEEEECcc-cC-ChhhHHHHHH-HhccC-CCcEEEEECC
Confidence 5789999999998632110 0 1144578999998775 22 2222233333 22223 2678899999
Q ss_pred CCCc
Q 025236 229 VGHY 232 (256)
Q Consensus 229 ~~H~ 232 (256)
+.|.
T Consensus 312 t~H~ 315 (379)
T PF03403_consen 312 TAHL 315 (379)
T ss_dssp --GG
T ss_pred CcCC
Confidence 9995
No 102
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.49 E-value=1.3e-12 Score=112.80 Aligned_cols=175 Identities=15% Similarity=0.087 Sum_probs=114.6
Q ss_pred HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH------------hcCCCCc
Q 025236 52 LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL------------STEPADI 119 (256)
Q Consensus 52 ~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~ 119 (256)
+.+.|..+||.|+..|.+|.+.|. |. | ........++..+.++++.... +..-.+.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~Se--G~----~------~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSD--GC----P------TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCC--Cc----C------ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 557788899999999999876432 21 1 0011223445555555555311 1111245
Q ss_pred eeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh--------------------hh-------
Q 025236 120 KLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT--------------------LK------- 172 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------------~~------- 172 (256)
+|+++|.|+||++++.+|... ++.++++|..+++...... +.
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~-----------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~ 407 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTG-----------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRN 407 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhC-----------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcc
Confidence 999999999999999998864 5667777766443210000 00
Q ss_pred -------------h-h-------cc------------CChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCc
Q 025236 173 -------------S-R-------ME------------GSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFR 219 (256)
Q Consensus 173 -------------~-~-------~~------------~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~ 219 (256)
+ . .. .........+++|+|++||..|..++.+++.++++.+++.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~- 486 (767)
T PRK05371 408 LLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGV- 486 (767)
T ss_pred cCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCC-
Confidence 0 0 00 001123346789999999999999999999999999998776
Q ss_pred ceEEEEeCCCCCcCC-----hHHHHHHHHHHHHHhhh
Q 025236 220 DLTFRCYNGVGHYTV-----PEEMDEVRNWLTARLEL 251 (256)
Q Consensus 220 ~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 251 (256)
+.++.+.++ +|... .+..+.+.+|+..+|+.
T Consensus 487 pkkL~l~~g-~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 487 PKKLFLHQG-GHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CeEEEEeCC-CccCCCchhHHHHHHHHHHHHHhcccc
Confidence 778877776 89643 24467889999988764
No 103
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.49 E-value=1.9e-12 Score=101.33 Aligned_cols=111 Identities=16% Similarity=0.129 Sum_probs=72.0
Q ss_pred CCceEEEEEccCCCCCCc--hHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSS--WSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
...|+||++||..+++.. ...++..+.++||+|++++.||.+-+.-... .-| .....+++..+
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp---r~f------------~ag~t~Dl~~~ 187 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP---RLF------------TAGWTEDLREV 187 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC---cee------------ecCCHHHHHHH
Confidence 457999999998765542 3447777778999999999998542221111 000 11223334455
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccC
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGW 164 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~ 164 (256)
.+++++.++..+++.+|+||||.+.+.++.+.. ...+..+++...+||
T Consensus 188 v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g--------~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 188 VNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEG--------DNTPLIAAVAVCNPW 235 (409)
T ss_pred HHHHHHhCCCCceEEEEecchHHHHHHHhhhcc--------CCCCceeEEEEeccc
Confidence 555566677779999999999999999988641 112344555555565
No 104
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.47 E-value=3.6e-12 Score=87.64 Aligned_cols=130 Identities=15% Similarity=0.150 Sum_probs=92.8
Q ss_pred ccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhh-hccC
Q 025236 99 EGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKS-RMEG 177 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~ 177 (256)
..+++++..+.+.+... .++++|++||+|+.+++.++.+. ..+++|+++++|+......... ....
T Consensus 41 P~~~dWi~~l~~~v~a~--~~~~vlVAHSLGc~~v~h~~~~~-----------~~~V~GalLVAppd~~~~~~~~~~~~t 107 (181)
T COG3545 41 PVLDDWIARLEKEVNAA--EGPVVLVAHSLGCATVAHWAEHI-----------QRQVAGALLVAPPDVSRPEIRPKHLMT 107 (181)
T ss_pred CCHHHHHHHHHHHHhcc--CCCeEEEEecccHHHHHHHHHhh-----------hhccceEEEecCCCccccccchhhccc
Confidence 34677777777766554 33699999999999999999975 5589999999998754432211 1111
Q ss_pred ChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-------hHHHHHHHHHHHH
Q 025236 178 SREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-------PEEMDEVRNWLTA 247 (256)
Q Consensus 178 ~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 247 (256)
..........-|.+++...+|++++++.++.+.+.+ ...++....+||... ++....+.+++.+
T Consensus 108 f~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w------gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 108 FDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW------GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhc------cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 122233455669999999999999999999999999 457777877888533 4555555555543
No 105
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.47 E-value=1.7e-12 Score=94.73 Aligned_cols=173 Identities=18% Similarity=0.196 Sum_probs=111.1
Q ss_pred cCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 27 RPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
+......|+|+|+||+.-....|..+.+.++..||.|++|++... ...+.....++..+.++
T Consensus 40 P~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~------------------~~p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 40 PSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL------------------FPPDGQDEIKSAASVIN 101 (307)
T ss_pred CCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc------------------cCCCchHHHHHHHHHHH
Confidence 333456899999999998888899999999999999999987531 11222334566666677
Q ss_pred HHHHHHhcCC------CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh---hhhhccC
Q 025236 107 HVANLLSTEP------ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT---LKSRMEG 177 (256)
Q Consensus 107 ~l~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~ 177 (256)
|+.+-+.... +-.++.++|||.||..|..+|+.. ...-++.++|.+.|.-..... ....+..
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~---------a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty 172 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGY---------ATSLKFSALIGIDPVAGTSKGKQTPPPILTY 172 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcc---------cccCchhheecccccCCCCCCCCCCCCeeec
Confidence 7765554422 236999999999999999999854 234567888887665433221 1111110
Q ss_pred ChHHHhhcCCCCEEEeecCCC----cccc---ch--hhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 178 SREATRRAASLPILLCHGSGD----DVVA---YK--HGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 178 ~~~~~~~~~~~p~l~~~G~~D----~~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
.+ ..-....|+++|...-- ...| ++ .-+++++.++. .+-..+..+-||+
T Consensus 173 ~p--~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~----p~~hfV~~dYGHm 230 (307)
T PF07224_consen 173 VP--QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKP----PCAHFVAKDYGHM 230 (307)
T ss_pred CC--cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcc----cceeeeecccccc
Confidence 00 11234589999876544 1222 22 23577777775 4445555568996
No 106
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.45 E-value=1.5e-12 Score=91.79 Aligned_cols=189 Identities=19% Similarity=0.265 Sum_probs=113.2
Q ss_pred CCCceEEEEEccCCCCCCchHH---HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCC--------CCCCCCCCc
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQ---LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGD--------LSEDGPDDL 98 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~---~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 98 (256)
+++.|+++++-|..++.+++.. +-+..+..|+.||.||..-+|....+... .| +++. ..+......
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~e--sw-DFG~GAGFYvnAt~epw~~~y 117 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDE--SW-DFGQGAGFYVNATQEPWAKHY 117 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcc--cc-cccCCceeEEecccchHhhhh
Confidence 4567999999999999887765 34445578999999998877766543321 22 2211 111111112
Q ss_pred ccHHHHHHHHHHHHhc---CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC----------
Q 025236 99 EGLDASAAHVANLLST---EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL---------- 165 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------- 165 (256)
.-.+-.++.+.+++.. ..+..++.|+||||||+-|+..+++. +.+.+.+-+++|..
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn-----------~~kykSvSAFAPI~NP~~cpWGqK 186 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKN-----------PSKYKSVSAFAPICNPINCPWGQK 186 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcC-----------cccccceeccccccCcccCcchHH
Confidence 2233344555555542 23446899999999999999988865 55666665554432
Q ss_pred ------CcchhhhhhccCChH-HHhhcCCCCEEEeecCCCccccchh-hHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 166 ------PCSRTLKSRMEGSRE-ATRRAASLPILLCHGSGDDVVAYKH-GERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 166 ------~~~~~~~~~~~~~~~-~~~~~~~~p~l~~~G~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
.....-.+.++.... .........+||-.|..|...+-+. -+.+.++.++.....+.+...+|-+|.
T Consensus 187 Af~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHS 261 (283)
T KOG3101|consen 187 AFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHS 261 (283)
T ss_pred HhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcc
Confidence 222211222221111 1122344569999999999887221 245555555332126888899999997
No 107
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=3.8e-12 Score=103.45 Aligned_cols=198 Identities=15% Similarity=0.134 Sum_probs=125.4
Q ss_pred CCCceEEEEEccCCCC---CCchHH----HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH
Q 025236 30 GKHQATIVWLHGLSDK---GSSWSQ----LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD 102 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~---~~~~~~----~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (256)
+++.|+|+++-|+.+- .+.|.. -...|+..||.|+++|.||.-.. |...-.|....- +.-..+|-.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hR---GlkFE~~ik~km----GqVE~eDQV 711 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHR---GLKFESHIKKKM----GQVEVEDQV 711 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcccc---chhhHHHHhhcc----CeeeehhhH
Confidence 4668999999997653 122332 34567789999999999875322 222122221111 111233333
Q ss_pred HHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccC---CCcchhhhhhccCCh
Q 025236 103 ASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGW---LPCSRTLKSRMEGSR 179 (256)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~~~ 179 (256)
+.++.+.+... ..+.+||++-|+|+||++++..+.+. |+.++.+|+-++- .-.+..+.+.+-..+
T Consensus 712 eglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L~~~-----------P~IfrvAIAGapVT~W~~YDTgYTERYMg~P 779 (867)
T KOG2281|consen 712 EGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGLAQY-----------PNIFRVAIAGAPVTDWRLYDTGYTERYMGYP 779 (867)
T ss_pred HHHHHHHHhcC-cccchheeEeccccccHHHHHHhhcC-----------cceeeEEeccCcceeeeeecccchhhhcCCC
Confidence 33444443332 34567999999999999999999865 8888887765542 111111111111111
Q ss_pred -------------HH--HhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-h---HHH-H
Q 025236 180 -------------EA--TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-P---EEM-D 239 (256)
Q Consensus 180 -------------~~--~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~---~~~-~ 239 (256)
.. ........+|++||--|+.|...+...+...|.++|. ..++++||+..|++- + +.+ .
T Consensus 780 ~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK-pyeL~IfP~ERHsiR~~es~~~yE~ 858 (867)
T KOG2281|consen 780 DNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK-PYELQIFPNERHSIRNPESGIYYEA 858 (867)
T ss_pred ccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC-ceEEEEccccccccCCCccchhHHH
Confidence 00 1112234599999999999999999999999999998 899999999999854 2 223 4
Q ss_pred HHHHHHHH
Q 025236 240 EVRNWLTA 247 (256)
Q Consensus 240 ~~~~~l~~ 247 (256)
.+..|+++
T Consensus 859 rll~FlQ~ 866 (867)
T KOG2281|consen 859 RLLHFLQE 866 (867)
T ss_pred HHHHHHhh
Confidence 57777764
No 108
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.44 E-value=2.1e-12 Score=96.38 Aligned_cols=180 Identities=13% Similarity=0.165 Sum_probs=109.8
Q ss_pred cCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCccc--------CCCccccccccCCCCCCCCC--
Q 025236 27 RPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIF--------GGYPCTAWFDVGDLSEDGPD-- 96 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-- 96 (256)
++.+++.|+|||.||.|++..-|..++-.|+.+||.|.++++|.+..... .+...-.|..+.....+...
T Consensus 112 ~tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 112 STKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 33466789999999999999999999999999999999999987643221 11112233333222222210
Q ss_pred -Ccc-------cHHHHHHHHHHHHh-------------------cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCC
Q 025236 97 -DLE-------GLDASAAHVANLLS-------------------TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGN 149 (256)
Q Consensus 97 -~~~-------~~~~~~~~l~~~~~-------------------~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 149 (256)
.-+ ....++.-+.++-. ...+..++.++|||+||..++.....
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~---------- 261 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS---------- 261 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc----------
Confidence 011 12222222222211 01122478999999999999887653
Q ss_pred CCccCcceEEEeccCC-CcchhhhhhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCC
Q 025236 150 PYSVNLSAIVGLSGWL-PCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNG 228 (256)
Q Consensus 150 ~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 228 (256)
...++..|++.+|. |..+.. ....+-|++++.- .|... .+.-..+.+.+.. +. .-.+.++.|
T Consensus 262 --~t~FrcaI~lD~WM~Pl~~~~-----------~~~arqP~~finv-~~fQ~-~en~~vmKki~~~-n~-g~~~it~~G 324 (399)
T KOG3847|consen 262 --HTDFRCAIALDAWMFPLDQLQ-----------YSQARQPTLFINV-EDFQW-NENLLVMKKIESQ-NE-GNHVITLDG 324 (399)
T ss_pred --ccceeeeeeeeeeecccchhh-----------hhhccCCeEEEEc-ccccc-hhHHHHHHhhhCC-Cc-cceEEEEcc
Confidence 57889989888874 444332 2345679999993 33332 2444444444432 22 458888999
Q ss_pred CCCcC
Q 025236 229 VGHYT 233 (256)
Q Consensus 229 ~~H~~ 233 (256)
+=|..
T Consensus 325 sVHqn 329 (399)
T KOG3847|consen 325 SVHQN 329 (399)
T ss_pred ceecc
Confidence 98853
No 109
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.44 E-value=9.2e-12 Score=105.08 Aligned_cols=115 Identities=15% Similarity=0.051 Sum_probs=72.6
Q ss_pred eeecCCCCCceEEEEEccCCCCCC---ch-HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcc
Q 025236 24 HVVRPKGKHQATIVWLHGLSDKGS---SW-SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLE 99 (256)
Q Consensus 24 ~~~~~~~~~~~~vl~~HG~~~~~~---~~-~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (256)
++.+...++.|+||++||++.+.. .+ ......|+.+||.|+++|++|+|.+. |. ..++ . ....+
T Consensus 13 ~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~--g~--~~~~-----~---~~~~~ 80 (550)
T TIGR00976 13 VYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASE--GE--FDLL-----G---SDEAA 80 (550)
T ss_pred EEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCC--Cc--eEec-----C---cccch
Confidence 333333457899999999987653 12 22456677899999999999886543 21 0110 0 12233
Q ss_pred cHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccC
Q 025236 100 GLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGW 164 (256)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~ 164 (256)
++.+.++++.. +...+.+|+++|+|+||.+++.+|... ++.+++++..+++
T Consensus 81 D~~~~i~~l~~---q~~~~~~v~~~G~S~GG~~a~~~a~~~-----------~~~l~aiv~~~~~ 131 (550)
T TIGR00976 81 DGYDLVDWIAK---QPWCDGNVGMLGVSYLAVTQLLAAVLQ-----------PPALRAIAPQEGV 131 (550)
T ss_pred HHHHHHHHHHh---CCCCCCcEEEEEeChHHHHHHHHhccC-----------CCceeEEeecCcc
Confidence 44444444422 222335999999999999999999864 5566666655443
No 110
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.43 E-value=8.3e-12 Score=100.73 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=80.0
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch-------hhhhhccCChHHHhhcCCC
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR-------TLKSRMEGSREATRRAASL 188 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 188 (256)
.+.++.+|+|+||||..|+.+++++ |+.|.+++++||.+.... .+.+.+. .........
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~al~~-----------Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~---~~~~~~~~l 350 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAGLHW-----------PERFGCVLSQSGSFWWPHRGGQQEGVLLEQLK---AGEVSARGL 350 (411)
T ss_pred CCccceEEEEEChHHHHHHHHHHhC-----------cccccEEEEeccceecCCccCCchhHHHHHHH---hcccCCCCc
Confidence 3446889999999999999999965 999999999998652111 0111100 000112335
Q ss_pred CEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHHHHHHHHHH
Q 025236 189 PILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEMDEVRNWLT 246 (256)
Q Consensus 189 p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 246 (256)
.+++.+|+.|..+ .+..+.+.+.|++.|. ++++.+++| ||... ...+...+.|+-
T Consensus 351 r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~-~~~~~~~~G-GHd~~~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 351 RIVLEAGRREPMI-MRANQALYAQLHPAGH-SVFWRQVDG-GHDALCWRGGLIQGLIDLW 407 (411)
T ss_pred eEEEeCCCCCchH-HHHHHHHHHHHHHCCC-cEEEEECCC-CcCHHHHHHHHHHHHHHHh
Confidence 7888899998654 4677899999999998 899999998 89744 444555555553
No 111
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.42 E-value=1.1e-11 Score=93.12 Aligned_cols=186 Identities=16% Similarity=0.198 Sum_probs=118.1
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
++|+++|+.+++...|..+++.+....+.|+.++.++.+. ......++.+.++...+.+.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~--------------------~~~~~~si~~la~~y~~~I~ 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGD--------------------DEPPPDSIEELASRYAEAIR 60 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCT--------------------TSHEESSHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCC--------------------CCCCCCCHHHHHHHHHHHhh
Confidence 3799999999999999999999984459999998886430 01123457777777777776
Q ss_pred cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh-----------hhhhcc------
Q 025236 114 TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT-----------LKSRME------ 176 (256)
Q Consensus 114 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------~~~~~~------ 176 (256)
...+..++.|+|||+||.+|+.+|.+.... ...+..++++.+..|.... ..+.+.
T Consensus 61 ~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~--------G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (229)
T PF00975_consen 61 ARQPEGPYVLAGWSFGGILAFEMARQLEEA--------GEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTP 132 (229)
T ss_dssp HHTSSSSEEEEEETHHHHHHHHHHHHHHHT--------T-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHH
T ss_pred hhCCCCCeeehccCccHHHHHHHHHHHHHh--------hhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCc
Confidence 655555999999999999999999976321 3457778888866553110 000000
Q ss_pred ----CCh--------------HHHhh----c---CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCC
Q 025236 177 ----GSR--------------EATRR----A---ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGH 231 (256)
Q Consensus 177 ----~~~--------------~~~~~----~---~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 231 (256)
... ..... . ..+|+++.....|+......-....+...-.. ..++++.++| +|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~v~G-~H 210 (229)
T PF00975_consen 133 DASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS-GDVEVHDVPG-DH 210 (229)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS-SSEEEEEESS-ET
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC-CCcEEEEEcC-CC
Confidence 000 00000 1 13468888888888775542222221222122 2688999997 99
Q ss_pred cCCh-HHHHHHHHHHHHHh
Q 025236 232 YTVP-EEMDEVRNWLTARL 249 (256)
Q Consensus 232 ~~~~-~~~~~~~~~l~~~l 249 (256)
..+- +....+.+.|.+.|
T Consensus 211 ~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 211 FSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TGHHSTTHHHHHHHHHHHH
T ss_pred cEecchHHHHHHHHHhccC
Confidence 8554 36677777777654
No 112
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.41 E-value=2.5e-12 Score=99.07 Aligned_cols=181 Identities=18% Similarity=0.168 Sum_probs=116.8
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCC-------ccccccccCCCCCCCCCCcccHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGY-------PCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
..|+|++.||.|++...|..+++.+++.||.|..+++++...+...-. ....|+ +...++...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~----------erp~dis~l 139 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWW----------ERPLDISAL 139 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhh----------cccccHHHH
Confidence 679999999999999999999999999999999999987533322110 001121 224566777
Q ss_pred HHHHHHH-----HhcCCCCceeEEeEeCchhHHHHHHHHHhhh-------cc------CCC-------------------
Q 025236 105 AAHVANL-----LSTEPADIKLGIGGFSMGAAIALYSATCRIL-------GQ------YGN------------------- 147 (256)
Q Consensus 105 ~~~l~~~-----~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-------~~------~~~------------------- 147 (256)
++.+.+. +....+..+|.++|||+||+.++.++-.... +. ...
T Consensus 140 Ld~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~ 219 (365)
T COG4188 140 LDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQ 219 (365)
T ss_pred HHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchh
Confidence 7777766 4444556799999999999999977653211 11 000
Q ss_pred -CCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCccccch-hhHHHHHHHhhcCCcceEEEE
Q 025236 148 -GNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYK-HGERSAQTLNSVGFRDLTFRC 225 (256)
Q Consensus 148 -~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~ 225 (256)
......++++++.+.+.....- -.......+.|++++.|..|...|.. .+...+..+.. ....+.+
T Consensus 220 ~~~~rDpriravvA~~p~~~~~F---------g~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g---~~k~~~~ 287 (365)
T COG4188 220 AYDLRDPRIRAVVAINPALGMIF---------GTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPG---ALKYLRL 287 (365)
T ss_pred hhccccccceeeeeccCCccccc---------ccccceeeecceeeecccccccCCcccccccccccCCc---chhheee
Confidence 0001223444444443322110 01134567899999999999987764 34455555643 2357888
Q ss_pred eCCCCCcCC
Q 025236 226 YNGVGHYTV 234 (256)
Q Consensus 226 ~~g~~H~~~ 234 (256)
++|+.|.-+
T Consensus 288 vp~a~h~sf 296 (365)
T COG4188 288 VPGATHFSF 296 (365)
T ss_pred cCCCccccc
Confidence 999999754
No 113
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.40 E-value=3.2e-12 Score=99.23 Aligned_cols=179 Identities=16% Similarity=0.156 Sum_probs=88.0
Q ss_pred eeecCC-CCCceEEEEEccCCCCCCc--------------h----HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccc
Q 025236 24 HVVRPK-GKHQATIVWLHGLSDKGSS--------------W----SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAW 84 (256)
Q Consensus 24 ~~~~~~-~~~~~~vl~~HG~~~~~~~--------------~----~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~ 84 (256)
++++.. ..+.|+||++||-|..++. + ..++..|+.+||.|+++|..+-|.........
T Consensus 105 lLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~--- 181 (390)
T PF12715_consen 105 LLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAA--- 181 (390)
T ss_dssp EEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCT---
T ss_pred EEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccc---
Confidence 344444 5678999999997765321 1 12466788999999999998765433211000
Q ss_pred cccCCCCCCCCCCcccHHH---------------HHHHHHHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCC
Q 025236 85 FDVGDLSEDGPDDLEGLDA---------------SAAHVANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGN 147 (256)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~ 147 (256)
.....+...+.. ....+.+++.. ..+.+||+++|+||||+.++.+++.
T Consensus 182 -------~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL-------- 246 (390)
T PF12715_consen 182 -------QGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL-------- 246 (390)
T ss_dssp -------TTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--------
T ss_pred -------cccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc--------
Confidence 000001111111 01112334433 3456799999999999999999986
Q ss_pred CCCCccCcceEEEeccCCCcchh--h--------------------hhhcc--CChHHHhhcCCCCEEEeecCCCccccc
Q 025236 148 GNPYSVNLSAIVGLSGWLPCSRT--L--------------------KSRME--GSREATRRAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 148 ~~~~~~~~~~~v~~~~~~~~~~~--~--------------------~~~~~--~~~~~~~~~~~~p~l~~~G~~D~~~~~ 203 (256)
.+++++.|..+-+....+. . ....+ ..+.........|+|++.|..|..+|.
T Consensus 247 ----DdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i 322 (390)
T PF12715_consen 247 ----DDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI 322 (390)
T ss_dssp -----TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH
T ss_pred ----chhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH
Confidence 5778776654332211110 0 00000 112223444567999999999999865
Q ss_pred hhhHHHHHHHhhcCCcceEEEEeCC
Q 025236 204 KHGERSAQTLNSVGFRDLTFRCYNG 228 (256)
Q Consensus 204 ~~~~~~~~~l~~~~~~~~~~~~~~g 228 (256)
.+..++...+- .+++++.+|+
T Consensus 323 --V~~AY~~~~~p--~n~~~~~~p~ 343 (390)
T PF12715_consen 323 --VRRAYAIMGAP--DNFQIHHYPK 343 (390)
T ss_dssp --HHHHHHHTT-G--GGEEE---GG
T ss_pred --HHHHHHhcCCC--cceEEeeccc
Confidence 45555554431 2689999986
No 114
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.38 E-value=2e-11 Score=94.06 Aligned_cols=183 Identities=17% Similarity=0.131 Sum_probs=109.4
Q ss_pred cccceeec--CCCCCceEEEEEccCCCCCCchHHHh----------hhcCCCCeEEEeeCCCCCCCcccCCCcccccccc
Q 025236 20 FGRTHVVR--PKGKHQATIVWLHGLSDKGSSWSQLL----------ETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDV 87 (256)
Q Consensus 20 ~~~~~~~~--~~~~~~~~vl~~HG~~~~~~~~~~~~----------~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~ 87 (256)
+...++.+ ..+.+.|+||..|+++.......... ..++++||.||..|.||.+.|. |. |
T Consensus 5 L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~--G~----~--- 75 (272)
T PF02129_consen 5 LAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE--GE----F--- 75 (272)
T ss_dssp EEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS---S-----B---
T ss_pred EEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC--Cc----c---
Confidence 33344545 56778999999999996542222211 1277899999999999876433 21 1
Q ss_pred CCCCCCCCCCcccHHHHHHHHHHHHhc-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 88 GDLSEDGPDDLEGLDASAAHVANLLST-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
... ...-.++...+.+++.. .-.+.+|+++|.|++|..++.+|... ++.+++++...+..+
T Consensus 76 ---~~~----~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~-----------~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 76 ---DPM----SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR-----------PPHLKAIVPQSGWSD 137 (272)
T ss_dssp ----TT----SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT------------TTEEEEEEESE-SB
T ss_pred ---ccC----ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC-----------CCCceEEEecccCCc
Confidence 000 11122223333444433 33446999999999999999999854 778888887755422
Q ss_pred cch---------------h---------------------h-------------hhhcc---------------------
Q 025236 167 CSR---------------T---------------------L-------------KSRME--------------------- 176 (256)
Q Consensus 167 ~~~---------------~---------------------~-------------~~~~~--------------------- 176 (256)
... . . .....
T Consensus 138 ~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 217 (272)
T PF02129_consen 138 LYRDSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQE 217 (272)
T ss_dssp TCCTSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHT
T ss_pred ccccchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHh
Confidence 000 0 0 00000
Q ss_pred CChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcC-CcceEEEEeCCCCCc
Q 025236 177 GSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVG-FRDLTFRCYNGVGHY 232 (256)
Q Consensus 177 ~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~H~ 232 (256)
.........+++|+|++.|-.|..+. ..+...++.+++.+ . +.++++-|. +|.
T Consensus 218 ~~~~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~-~~~Liigpw-~H~ 271 (272)
T PF02129_consen 218 RSPSERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSK-PQRLIIGPW-THG 271 (272)
T ss_dssp TBHHHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC--EEEEEESE-STT
T ss_pred CChHHHHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCC-CCEEEEeCC-CCC
Confidence 00111346788999999999997776 88889999998865 3 458888885 784
No 115
>PRK04940 hypothetical protein; Provisional
Probab=99.38 E-value=7e-11 Score=83.03 Aligned_cols=106 Identities=11% Similarity=0.072 Sum_probs=68.1
Q ss_pred ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccC------ChH----HHhhcCCC
Q 025236 119 IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEG------SRE----ATRRAASL 188 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~ 188 (256)
+++.|+|.|+||+-|..++.+. .+++ |++.|.+.....+...+.. ... .......-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------------g~~a-VLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~ 125 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------------GIRQ-VIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRD 125 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------------CCCE-EEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcc
Confidence 3789999999999999999864 2433 4444443322222221111 000 11112233
Q ss_pred CEEEeecCCCccccchhhHHHHHHHhhcCCcce-EEEEeCCCCCcCC--hHHHHHHHHHHH
Q 025236 189 PILLCHGSGDDVVAYKHGERSAQTLNSVGFRDL-TFRCYNGVGHYTV--PEEMDEVRNWLT 246 (256)
Q Consensus 189 p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~g~~H~~~--~~~~~~~~~~l~ 246 (256)
..+++..+.|++..+..+.+.+. .+ +.++.+|++|.+. .+.+..|++|+.
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y~--------~~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEELH--------PYYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHhc--------cCceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 46999999999998875544332 34 7889999999976 667889999984
No 116
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=7.6e-12 Score=93.13 Aligned_cols=128 Identities=21% Similarity=0.264 Sum_probs=79.9
Q ss_pred ccceeecCC-CCCceEEEEEccCCCCCCchHHHh--hhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCC
Q 025236 21 GRTHVVRPK-GKHQATIVWLHGLSDKGSSWSQLL--ETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPD 96 (256)
Q Consensus 21 ~~~~~~~~~-~~~~~~vl~~HG~~~~~~~~~~~~--~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (256)
...++.++. .+..|+||++||.+++...+.... +.++ ..||.|+.||....- .+......|+.. .+...
T Consensus 48 ~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~---wn~~~~~~~~~p----~~~~~ 120 (312)
T COG3509 48 SYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRA---WNANGCGNWFGP----ADRRR 120 (312)
T ss_pred ceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccc---cCCCcccccCCc----ccccC
Confidence 334555554 345589999999999988776644 4444 579999999653220 011111122211 11122
Q ss_pred CcccHHHHHHHHHHHHhc-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 97 DLEGLDASAAHVANLLST-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
..+++....+.+..++.+ ..+..||++.|.|-||.++..+++.. +..+.++..+++..+
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~-----------p~~faa~A~VAg~~~ 180 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEY-----------PDIFAAIAPVAGLLA 180 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcC-----------cccccceeeeecccC
Confidence 333343333333333333 24567999999999999999999954 899999999888774
No 117
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.36 E-value=2.9e-11 Score=93.44 Aligned_cols=67 Identities=22% Similarity=0.438 Sum_probs=59.1
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcC-CcceEEEEeCCCCCcCC-hHHHHHHHHHHHHHhhhcc
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVG-FRDLTFRCYNGVGHYTV-PEEMDEVRNWLTARLELEG 253 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~~ 253 (256)
.+.|+++.||..|.++|+..++.+.+.+++.| . +++++.+++.+|... .......++||.++|+...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a-~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA-DVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC-CEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCCC
Confidence 46899999999999999999999999999999 6 899999999999754 4456788899999998654
No 118
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.36 E-value=7.2e-12 Score=88.08 Aligned_cols=169 Identities=13% Similarity=0.116 Sum_probs=111.2
Q ss_pred CCceEEEEEccCCCCCC---chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGS---SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
...++.||+||+-.... .-...+..+...||+|..+++...+.. ..-.+.+.+.+.-
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~--------------------htL~qt~~~~~~g 124 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQV--------------------HTLEQTMTQFTHG 124 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCccc--------------------ccHHHHHHHHHHH
Confidence 34679999999644332 223355555578999999987542110 0001222333333
Q ss_pred HHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhcc-----------
Q 025236 108 VANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRME----------- 176 (256)
Q Consensus 108 l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------- 176 (256)
+.-.++.....+++.+.|||.|+++++.+.++. ..+++.|+++++|.+...+.......
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~----------r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae 194 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ----------RSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAE 194 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHh----------cCchHHHHHHHhhHhhHHHHhCCccccccCcccchhh
Confidence 322233323335688889999999999998874 26789999999987664433222211
Q ss_pred --CChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 177 --GSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 177 --~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
..........+.|+|++.|..|.---.++.+.+...++ +..+.+++|.+|+-.
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYDI 249 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhhH
Confidence 11223445678899999999998877889999999986 489999999999844
No 119
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.35 E-value=3.9e-12 Score=97.67 Aligned_cols=112 Identities=21% Similarity=0.271 Sum_probs=72.1
Q ss_pred CCCceEEEEEccCCCCC-CchHH-Hhhh-cCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 30 GKHQATIVWLHGLSDKG-SSWSQ-LLET-LPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~-~~~~~-~~~~-l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
+..+|++|++||++++. ..|.. +.+. +...+++|+++|+++.... .+.. .....+.+.+.+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~---~y~~------------a~~~~~~v~~~la 97 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP---NYPQ------------AVNNTRVVGAELA 97 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc---ChHH------------HHHhHHHHHHHHH
Confidence 45578999999999887 55654 4443 4446899999999764110 0000 0001222223333
Q ss_pred HHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc
Q 025236 107 HVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC 167 (256)
Q Consensus 107 ~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 167 (256)
.+.+.+.+. .+.+++.|+||||||+++..++.+. +.+++.++++.+..|.
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~-----------~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL-----------NGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh-----------cCccceeEEecCCccc
Confidence 333333222 3446899999999999999999865 6789999999876654
No 120
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.35 E-value=6.6e-12 Score=94.23 Aligned_cols=205 Identities=12% Similarity=0.129 Sum_probs=116.2
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcC-CCC----eEEEeeCCCCCCCcccCCC-ccc--cccccCCCCCCCCCCcccHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLP-LPN----IKWICPTAPTRPVAIFGGY-PCT--AWFDVGDLSEDGPDDLEGLDA 103 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~-~~g----~~vi~~d~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 103 (256)
...+.||+||++++...+..+++++. ..| ..++.++..|. -...|. ... ...-.-.+..........-..
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~--v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGK--VKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSE--EEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCe--EEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 45678999999999999999998885 554 22333333322 111111 000 000000011111122333445
Q ss_pred HHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhh-----------
Q 025236 104 SAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLK----------- 172 (256)
Q Consensus 104 ~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----------- 172 (256)
++..+...+.+.+.-.++-++||||||..++.++..... ...-+++..+|.+++.+.......
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~------~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~ 161 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGN------DKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKN 161 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTT------GTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhcc------CCCCcccceEEEeccccCccccccccchhhhhccc
Confidence 555566666667777799999999999999999887411 111246788888877554221100
Q ss_pred ------hhccCChHH--HhhcCCCCEEEeecC------CCccccchhhHHHHHHHhhcCCcceEEEEeCC--CCCcCC--
Q 025236 173 ------SRMEGSREA--TRRAASLPILLCHGS------GDDVVAYKHGERSAQTLNSVGFRDLTFRCYNG--VGHYTV-- 234 (256)
Q Consensus 173 ------~~~~~~~~~--~~~~~~~p~l~~~G~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~-- 234 (256)
..+...... ......+.+|.|.|. .|..||...++.+...++.... ..+-.++.| +.|+-.
T Consensus 162 gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~-~Y~e~~v~G~~a~HS~Lhe 240 (255)
T PF06028_consen 162 GPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAK-SYQEKTVTGKDAQHSQLHE 240 (255)
T ss_dssp -BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSS-EEEEEEEESGGGSCCGGGC
T ss_pred CCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccC-ceEEEEEECCCCccccCCC
Confidence 000000011 122345679999999 8999999999999888876554 677777766 589854
Q ss_pred -hHHHHHHHHHH
Q 025236 235 -PEEMDEVRNWL 245 (256)
Q Consensus 235 -~~~~~~~~~~l 245 (256)
++..+.|.+||
T Consensus 241 N~~V~~~I~~FL 252 (255)
T PF06028_consen 241 NPQVDKLIIQFL 252 (255)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 44566777776
No 121
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.35 E-value=6.9e-11 Score=90.28 Aligned_cols=180 Identities=16% Similarity=0.145 Sum_probs=113.0
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcC---CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLP---LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~---~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
+++.++++.|..+--+.|..+++.|. ...+.|+++.+.|+........ . . ......++++-+++-
T Consensus 1 ~~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~--------~--~--~~~~~~sL~~QI~hk 68 (266)
T PF10230_consen 1 PRPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSK--------F--S--PNGRLFSLQDQIEHK 68 (266)
T ss_pred CcEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccc--------c--c--CCCCccCHHHHHHHH
Confidence 35789999999988888988887776 4579999998887643322200 0 0 012233444444444
Q ss_pred ----HHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc----------------
Q 025236 109 ----ANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC---------------- 167 (256)
Q Consensus 109 ----~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------- 167 (256)
.+.+.... +..+++|+|||.|++++++++.+.+ ....++..++++.|.+..
T Consensus 69 ~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~--------~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~ 140 (266)
T PF10230_consen 69 IDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP--------DLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFS 140 (266)
T ss_pred HHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc--------ccCCceeEEEEeCCccccccCCchhHHHHHHHhh
Confidence 44443322 4569999999999999999999862 012566667666554210
Q ss_pred ---------------------------------c------------------------hhhhhhccCCh-HHHhhc---C
Q 025236 168 ---------------------------------S------------------------RTLKSRMEGSR-EATRRA---A 186 (256)
Q Consensus 168 ---------------------------------~------------------------~~~~~~~~~~~-~~~~~~---~ 186 (256)
. ..-.+.+.... ...... .
T Consensus 141 ~~~~~~~~~~~~~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~ 220 (266)
T PF10230_consen 141 PPPLVWLASFLSFLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNEN 220 (266)
T ss_pred ccHHHHHHHHHHHHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccC
Confidence 0 00000011111 111111 2
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcC
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYT 233 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 233 (256)
..++.+..|.+|.++|.+..+++.+.+..... ++++.+ +|..|.|
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~-~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEP-DVVVDE-EGIPHAF 265 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCC-eEEEec-CCCCCCC
Confidence 67999999999999999999999999874332 455555 7788875
No 122
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.31 E-value=4.3e-11 Score=98.17 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=39.5
Q ss_pred HhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 182 TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 182 ~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
....+++|++++.|..|.++|++.+..+.+.+.. +++++..++ ||.
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs----~~~fvl~~g-GHI 481 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG----KRRFVLSNS-GHI 481 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC----CeEEEecCC-Ccc
Confidence 3456889999999999999999999999888864 689999986 993
No 123
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.30 E-value=3.7e-10 Score=86.02 Aligned_cols=88 Identities=27% Similarity=0.319 Sum_probs=58.0
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCC--CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLP--NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~--g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
.|.|+++||++.+...|......+... .|.++.+|.+++|.+. . . ....... +..+..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~--~-----------~----~~~~~~~---~~~~~~ 80 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD--P-----------A----GYSLSAY---ADDLAA 80 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC--c-----------c----cccHHHH---HHHHHH
Confidence 559999999999988888733333211 1999999999876543 0 0 0011112 344444
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhh
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
++.... ..++.++|||+||.+++.++.+.+
T Consensus 81 ~~~~~~-~~~~~l~G~S~Gg~~~~~~~~~~p 110 (282)
T COG0596 81 LLDALG-LEKVVLVGHSMGGAVALALALRHP 110 (282)
T ss_pred HHHHhC-CCceEEEEecccHHHHHHHHHhcc
Confidence 444322 225999999999999999999764
No 124
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.29 E-value=2.1e-10 Score=83.15 Aligned_cols=173 Identities=21% Similarity=0.197 Sum_probs=98.0
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
+..++||+..|++.....|..++.+|+..||.|+.+|...| ++.+.|. -.........+.+..+.+
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~H-vGlSsG~-------------I~eftms~g~~sL~~V~d 93 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNH-VGLSSGD-------------INEFTMSIGKASLLTVID 93 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------------------HHHHHHHHHHHHH
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEecccccc-ccCCCCC-------------hhhcchHHhHHHHHHHHH
Confidence 34689999999999999999999999999999999998754 2222221 011234456677777777
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhcc--------------
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRME-------------- 176 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------------- 176 (256)
++... ...+++|+.-|+-|-+|+..+.+ ..+..+|..-|-......+...+.
T Consensus 94 wl~~~-g~~~~GLIAaSLSaRIAy~Va~~-------------i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 94 WLATR-GIRRIGLIAASLSARIAYEVAAD-------------INLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHT-T---EEEEEETTHHHHHHHHTTT-------------S--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred HHHhc-CCCcchhhhhhhhHHHHHHHhhc-------------cCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 77743 34489999999999999999874 235555555454332222111111
Q ss_pred -----------------------CC--hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCC
Q 025236 177 -----------------------GS--REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGH 231 (256)
Q Consensus 177 -----------------------~~--~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 231 (256)
.. .....+...+|++.+++++|.+|.....+++...+.. +.++++.++|+.|
T Consensus 160 ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s---~~~klysl~Gs~H 236 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINS---NKCKLYSLPGSSH 236 (294)
T ss_dssp EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEEEETT-SS
T ss_pred ccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCC---CceeEEEecCccc
Confidence 00 1114456789999999999999977766666666655 5799999999999
Q ss_pred cCC
Q 025236 232 YTV 234 (256)
Q Consensus 232 ~~~ 234 (256)
...
T Consensus 237 dL~ 239 (294)
T PF02273_consen 237 DLG 239 (294)
T ss_dssp -TT
T ss_pred hhh
Confidence 754
No 125
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.29 E-value=3.6e-11 Score=96.75 Aligned_cols=111 Identities=20% Similarity=0.257 Sum_probs=72.6
Q ss_pred CCceEEEEEccCCCCC--CchHH-HhhhcC--CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 31 KHQATIVWLHGLSDKG--SSWSQ-LLETLP--LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~--~~~~~-~~~~l~--~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
..+|++|++||++.+. ..|.. +.+.+. ...++|+++|+++++.+.... .......+.+.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---------------a~~~t~~vg~~l 103 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---------------SAAYTKLVGKDV 103 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---------------ccccHHHHHHHH
Confidence 3568999999998754 34554 555443 246999999999875322110 001122333444
Q ss_pred HHHHHHHhc--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCc
Q 025236 106 AHVANLLST--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPC 167 (256)
Q Consensus 106 ~~l~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 167 (256)
..+.+.+.. ..+.+++.|+||||||++|..++.+. +.++..++++.|.-|.
T Consensus 104 a~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~-----------p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 104 AKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT-----------KHKVNRITGLDPAGPT 156 (442)
T ss_pred HHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC-----------CcceeEEEEEcCCCCc
Confidence 444444322 23446999999999999999998854 7789999999886553
No 126
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.27 E-value=5e-11 Score=90.38 Aligned_cols=194 Identities=14% Similarity=0.114 Sum_probs=71.8
Q ss_pred CceEEEEEccCCCCCC---chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGS---SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
+...|||+.|.+..-. ....+++.|...+|.++-+.++. .+.|++... -..+.+++.+.++++
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G~G~~S----------L~~D~~eI~~~v~yl 97 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSGWGTSS----------LDRDVEEIAQLVEYL 97 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTTS-S------------HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCCcCcch----------hhhHHHHHHHHHHHH
Confidence 4568999999886433 35568888987899999997752 233432211 112233344444444
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc---------hhhhhh-----
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS---------RTLKSR----- 174 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~----- 174 (256)
+..-.......+|+|+|||-|+.-++.++...... .....+.++|+.+|--+.. +.+.+.
T Consensus 98 r~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~------~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~ 171 (303)
T PF08538_consen 98 RSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPS------PSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAK 171 (303)
T ss_dssp HHHS------S-EEEEEECCHHHHHHHHHHH-TT---------CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHH
T ss_pred HHhhccccCCccEEEEecCCCcHHHHHHHhccCcc------ccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHH
Confidence 33311112456999999999999999999874110 1146788998887642100 000000
Q ss_pred -----------------------------------------------ccC-ChHHHhhcCCCCEEEeecCCCccccchhh
Q 025236 175 -----------------------------------------------MEG-SREATRRAASLPILLCHGSGDDVVAYKHG 206 (256)
Q Consensus 175 -----------------------------------------------~~~-~~~~~~~~~~~p~l~~~G~~D~~~~~~~~ 206 (256)
+.. ........+..|+|++.+++|+.+|...-
T Consensus 172 ~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vd 251 (303)
T PF08538_consen 172 ELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVD 251 (303)
T ss_dssp HHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-------
T ss_pred HHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccc
Confidence 000 00012334677999999999999997533
Q ss_pred -HHHHHHHhhcCC---cceEEEEeCCCCCcCChHHHHHHHHHH
Q 025236 207 -ERSAQTLNSVGF---RDLTFRCYNGVGHYTVPEEMDEVRNWL 245 (256)
Q Consensus 207 -~~~~~~l~~~~~---~~~~~~~~~g~~H~~~~~~~~~~~~~l 245 (256)
+++.+++++.-. ....-.++||+.|.+..+..+...+||
T Consensus 252 k~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l 294 (303)
T PF08538_consen 252 KEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWL 294 (303)
T ss_dssp -------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc
Confidence 466666654221 122345899999998754443333333
No 127
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.25 E-value=3.9e-11 Score=102.46 Aligned_cols=108 Identities=15% Similarity=0.169 Sum_probs=71.4
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCcc---------ccccccCCCCCCCCCCcccHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPC---------TAWFDVGDLSEDGPDDLEGLD 102 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 102 (256)
..|+||++||++++...|..+++.|+..||+|+++|+++||.+....... ..+++.... ....+..+...
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l-~~aRDn~rQ~v 526 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASL-LVARDNLRQSI 526 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccc-cccccCHHHHH
Confidence 35799999999999999999999999889999999999998774331100 001110000 00112233333
Q ss_pred HHHHHHHHHHh------cC------CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 103 ASAAHVANLLS------TE------PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 103 ~~~~~l~~~~~------~~------~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.++..+...+. .. .+..+++++||||||.++..++...
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 44444444444 11 3456999999999999999999853
No 128
>COG0627 Predicted esterase [General function prediction only]
Probab=99.24 E-value=5.8e-10 Score=86.37 Aligned_cols=209 Identities=19% Similarity=0.186 Sum_probs=127.6
Q ss_pred CCCceEEEEEccCCCCCCchH---HHhhhcCCCCeEEEeeCCCCCCCcccCC----C-ccccccccCCCC--CCCCCCcc
Q 025236 30 GKHQATIVWLHGLSDKGSSWS---QLLETLPLPNIKWICPTAPTRPVAIFGG----Y-PCTAWFDVGDLS--EDGPDDLE 99 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~---~~~~~l~~~g~~vi~~d~~~~~~~~~~~----~-~~~~~~~~~~~~--~~~~~~~~ 99 (256)
+++.|+++++||..++...+. .+-+.....|+.++++|..-.+...... . ....|+..-... ...+...+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 467899999999988864433 2445555678999998654332111110 0 011222111000 01112222
Q ss_pred cHHHHHHHHHHHHhcCCC--C--ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhh-
Q 025236 100 GLDASAAHVANLLSTEPA--D--IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSR- 174 (256)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~--~--~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 174 (256)
++. +..+...+.+..+ . ++..++||||||+-|+.+|+++ |++++.+..++|.+.........
T Consensus 131 tfl--~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~-----------pd~f~~~sS~Sg~~~~s~~~~~~~ 197 (316)
T COG0627 131 TFL--TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH-----------PDRFKSASSFSGILSPSSPWGPTL 197 (316)
T ss_pred HHH--HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC-----------cchhceeccccccccccccccccc
Confidence 222 2344433333222 1 2789999999999999999975 68888888888876544110000
Q ss_pred --------------c---------cCChHHHh-----hc---------CCCCEEEeecCCCcccc--chhhHHHHHHHhh
Q 025236 175 --------------M---------EGSREATR-----RA---------ASLPILLCHGSGDDVVA--YKHGERSAQTLNS 215 (256)
Q Consensus 175 --------------~---------~~~~~~~~-----~~---------~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~ 215 (256)
+ ..++.... .. ...++++-+|..|.... ....+.+.+++++
T Consensus 198 ~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~ 277 (316)
T COG0627 198 AMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRA 277 (316)
T ss_pred cccccccCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHh
Confidence 0 00111111 21 55788888999999885 3347899999999
Q ss_pred cCCcceEEEEeCCCCCcC--ChHHHHHHHHHHHHHhhhc
Q 025236 216 VGFRDLTFRCYNGVGHYT--VPEEMDEVRNWLTARLELE 252 (256)
Q Consensus 216 ~~~~~~~~~~~~g~~H~~--~~~~~~~~~~~l~~~l~~~ 252 (256)
.|. +..+...++.+|.+ ....++....|+...+...
T Consensus 278 ~g~-~~~~~~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 278 AGI-PNGVRDQPGGDHSWYFWASQLADHLPWLAGALGLA 315 (316)
T ss_pred cCC-CceeeeCCCCCcCHHHHHHHHHHHHHHHHHHhccC
Confidence 888 77888888889984 4778899999999888653
No 129
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.23 E-value=1.5e-11 Score=93.88 Aligned_cols=129 Identities=23% Similarity=0.341 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcCCCC--ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhh------c
Q 025236 104 SAAHVANLLSTEPAD--IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSR------M 175 (256)
Q Consensus 104 ~~~~l~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~ 175 (256)
..+.|...+...+.. .+.+|+|+||||+.|+.++.++ |+.+.+++++||.+.....+... .
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~-----------Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~ 166 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH-----------PDLFGAVIAFSGALDPSPSLWGPSDDEAWK 166 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS-----------TTTESEEEEESEESETTHCHHHHSTCGHHG
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC-----------ccccccccccCccccccccccCcCCcHHhh
Confidence 334555555554432 2389999999999999999976 99999999999875432111100 0
Q ss_pred cCC-----hHHHhhcCCCCEEEeecCCCccccc----------hhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHH
Q 025236 176 EGS-----REATRRAASLPILLCHGSGDDVVAY----------KHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEM 238 (256)
Q Consensus 176 ~~~-----~~~~~~~~~~p~l~~~G~~D~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~ 238 (256)
... ..........++++..|+.|..... ...+.+.+.++..+. ...+..++| +|... ...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~G-~H~~~~W~~~l 244 (251)
T PF00756_consen 167 ENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGI-PHTYHVFPG-GHDWAYWRRRL 244 (251)
T ss_dssp GCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEEC-TTESEEEHS-ESSHHHHHHHH
T ss_pred hccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCC-CceEEEecC-ccchhhHHHHH
Confidence 000 1112344567899999999984321 223344555655666 778888886 88643 4455
Q ss_pred HHHHHHH
Q 025236 239 DEVRNWL 245 (256)
Q Consensus 239 ~~~~~~l 245 (256)
...+.|+
T Consensus 245 ~~~L~~~ 251 (251)
T PF00756_consen 245 PDALPWM 251 (251)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 5555543
No 130
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.20 E-value=2.1e-10 Score=85.28 Aligned_cols=110 Identities=16% Similarity=0.150 Sum_probs=70.5
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcC--------CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLP--------LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~--------~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
+.+|||+||.+++..++..+...+. ...+.+++.|+........+. ......+.+.+.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~--------------~l~~q~~~~~~~ 69 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGR--------------TLQRQAEFLAEA 69 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccc--------------cHHHHHHHHHHH
Confidence 5689999999988887777665541 335888999886532111100 011223445566
Q ss_pred HHHHHHHH-hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccC
Q 025236 105 AAHVANLL-STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGW 164 (256)
Q Consensus 105 ~~~l~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~ 164 (256)
++.+.+.+ ....+..+|+|+||||||.++-.++.... ..+..++.+|.++..
T Consensus 70 i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~--------~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 70 IKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN--------YDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc--------cccccEEEEEEEcCC
Confidence 66666655 22345569999999999999888876421 113568888888653
No 131
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=3e-09 Score=82.23 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=67.4
Q ss_pred CCceEEEEEccCCCCCCchH-----------HHh---hhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCC
Q 025236 31 KHQATIVWLHGLSDKGSSWS-----------QLL---ETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPD 96 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~-----------~~~---~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (256)
...++|+++|++.++..... .+. +.+--..|-||+.|..|.+.+.++-. .+... +..-....
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~---s~~p~-g~~yg~~F 124 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS---SINPG-GKPYGSDF 124 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC---CcCCC-CCccccCC
Confidence 45679999999988654333 222 22334569999999998865543221 11111 00000111
Q ss_pred CcccHHHHHHHHHHHHhcCCCCcee-EEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 97 DLEGLDASAAHVANLLSTEPADIKL-GIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
...++.+++..-..++....-. ++ .++|-||||+-++.++... |+.+..++.+++
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~y-----------Pd~V~~~i~ia~ 180 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRY-----------PDRVRRAIPIAT 180 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhC-----------hHHHhhhheecc
Confidence 2234445444443343333223 54 4999999999999999965 777776666644
No 132
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.16 E-value=3.8e-09 Score=77.00 Aligned_cols=207 Identities=16% Similarity=0.124 Sum_probs=123.7
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCC-----eEEEeeCCCCCCCcccCCCcccccccc-CCCCCCCCCCcccHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPN-----IKWICPTAPTRPVAIFGGYPCTAWFDV-GDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g-----~~vi~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 106 (256)
.-+.||+||.+++...+..++.++...+ --++.+|..+. ....+......-+.. ............+...++.
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgs-lk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGS-LKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCc-EEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 4578999999999999999888886443 34555555542 111111111111111 1111222233445577777
Q ss_pred HHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC-----cchhhhhhccCCh--
Q 025236 107 HVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP-----CSRTLKSRMEGSR-- 179 (256)
Q Consensus 107 ~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~-- 179 (256)
.+...+.+++.-.++-++||||||.....++..... ...-+.+...|.+.+.+. ..+...+..-..+
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~------dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~ 197 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGD------DKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGL 197 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcC------CCCCcchhheEEecccccccccCCCcchheeeccCccc
Confidence 888888888877799999999999999999886521 122345677777766544 1111111110000
Q ss_pred ------H-----HHhhcCCCCEEEeecCC------CccccchhhHHHHHHHhhcCCcceEEEEeCC--CCCcCC---hHH
Q 025236 180 ------E-----ATRRAASLPILLCHGSG------DDVVAYKHGERSAQTLNSVGFRDLTFRCYNG--VGHYTV---PEE 237 (256)
Q Consensus 180 ------~-----~~~~~~~~p~l~~~G~~------D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~---~~~ 237 (256)
. .......+.+|++.|+- |..||...+......+...+. ...-.+++| +.|.-. +..
T Consensus 198 ~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~k-sy~e~~~~Gk~a~Hs~lhen~~v 276 (288)
T COG4814 198 IKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGK-SYIESLYKGKDARHSKLHENPTV 276 (288)
T ss_pred cCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcc-eeEEEeeeCCcchhhccCCChhH
Confidence 0 01123457899999984 568888888888888887654 344445554 688855 445
Q ss_pred HHHHHHHHHH
Q 025236 238 MDEVRNWLTA 247 (256)
Q Consensus 238 ~~~~~~~l~~ 247 (256)
.+.+..||-+
T Consensus 277 ~~yv~~FLw~ 286 (288)
T COG4814 277 AKYVKNFLWE 286 (288)
T ss_pred HHHHHHHhhc
Confidence 6777777743
No 133
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.15 E-value=5.8e-10 Score=90.46 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=105.7
Q ss_pred CceEEEEEccCC---CCCCchHHHhhhcCCCC--eEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 32 HQATIVWLHGLS---DKGSSWSQLLETLPLPN--IKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 32 ~~~~vl~~HG~~---~~~~~~~~~~~~l~~~g--~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
..|++++.||.. ..++.+..+-..+...+ ..+.++|++..- +| ..+...++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i----gG--------------------~nI~h~ae 230 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI----GG--------------------ANIKHAAE 230 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC----CC--------------------cchHHHHH
Confidence 458899999977 22333444555555444 445555554310 00 11233333
Q ss_pred HHHH-------HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCCh
Q 025236 107 HVAN-------LLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSR 179 (256)
Q Consensus 107 ~l~~-------~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 179 (256)
.+.. .+...++..+|+|+|.|||+.+++....- .+...++++|+++-.+...+.- +...
T Consensus 231 ~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSps----------nsdv~V~~vVCigypl~~vdgp----rgir 296 (784)
T KOG3253|consen 231 YSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPS----------NSDVEVDAVVCIGYPLDTVDGP----RGIR 296 (784)
T ss_pred HHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccc----------cCCceEEEEEEecccccCCCcc----cCCc
Confidence 3322 23345666799999999998888877652 2344588999886544332211 1122
Q ss_pred HHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 180 EATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 180 ~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
.......+.|+|++.|.+|..++.+..+++.+++++ ..+++++.+++|.+-
T Consensus 297 DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA----~~elhVI~~adhsma 347 (784)
T KOG3253|consen 297 DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA----EVELHVIGGADHSMA 347 (784)
T ss_pred chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc----cceEEEecCCCcccc
Confidence 234566789999999999999999999999999987 789999999999754
No 134
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.09 E-value=9.5e-10 Score=84.81 Aligned_cols=180 Identities=18% Similarity=0.121 Sum_probs=105.2
Q ss_pred CCceEEEEEccCCCCCCchHH--HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQ--LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~--~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
+.+|++|.+.|.|...-.... ++..|.+.|+..+.+..+..|.........+. ....++- ...-.........+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~---l~~VsDl-~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSS---LRNVSDL-FVMGRATILESRAL 165 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhccc---ccchhHH-HHHHhHHHHHHHHH
Confidence 468999999998875433222 46777777999999988876544322110000 0000000 00001222334455
Q ss_pred HHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC----------c---chhhhhhc
Q 025236 109 ANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP----------C---SRTLKSRM 175 (256)
Q Consensus 109 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~---~~~~~~~~ 175 (256)
..++..+ ...++++.|.||||.+|..++... |..+..+-++++... . .+.+...+
T Consensus 166 l~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~-----------p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~ 233 (348)
T PF09752_consen 166 LHWLERE-GYGPLGLTGISMGGHMAALAASNW-----------PRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQF 233 (348)
T ss_pred HHHHHhc-CCCceEEEEechhHhhHHhhhhcC-----------CCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHh
Confidence 5666655 445999999999999999999864 444444433332211 0 00000000
Q ss_pred c---------------------------CChHH-----------------HhhcCCCCEEEeecCCCccccchhhHHHHH
Q 025236 176 E---------------------------GSREA-----------------TRRAASLPILLCHGSGDDVVAYKHGERSAQ 211 (256)
Q Consensus 176 ~---------------------------~~~~~-----------------~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~ 211 (256)
. ...+. ......-.+.++.+++|.+||......+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 234 EDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred cccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 0 00000 111123468999999999999998889998
Q ss_pred HHhhcCCcceEEEEeCCCCCc
Q 025236 212 TLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 212 ~l~~~~~~~~~~~~~~g~~H~ 232 (256)
.+ |.+++..++| ||.
T Consensus 314 ~W-----PGsEvR~l~g-GHV 328 (348)
T PF09752_consen 314 IW-----PGSEVRYLPG-GHV 328 (348)
T ss_pred hC-----CCCeEEEecC-CcE
Confidence 88 5789999998 995
No 135
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.06 E-value=3.7e-09 Score=76.13 Aligned_cols=184 Identities=14% Similarity=0.084 Sum_probs=107.9
Q ss_pred EEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhc
Q 025236 35 TIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLST 114 (256)
Q Consensus 35 ~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (256)
.|+.--+.|--...|..++...+..||.|+.+|++|.+-+.........|-- . .-...|+...++.+.+.+
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~-~------DwA~~D~~aal~~~~~~~-- 102 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRY-L------DWARLDFPAALAALKKAL-- 102 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccch-h------hhhhcchHHHHHHHHhhC--
Confidence 4444445555556778899999999999999999998766544332221100 0 001234455555554433
Q ss_pred CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEE------eccCCC----------------------
Q 025236 115 EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVG------LSGWLP---------------------- 166 (256)
Q Consensus 115 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~------~~~~~~---------------------- 166 (256)
+..+...+|||+||.+.-.+..+. ++.+... ++++..
T Consensus 103 --~~~P~y~vgHS~GGqa~gL~~~~~-------------k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~ 167 (281)
T COG4757 103 --PGHPLYFVGHSFGGQALGLLGQHP-------------KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWK 167 (281)
T ss_pred --CCCceEEeeccccceeecccccCc-------------ccceeeEeccccccccchhhhhcccceeeccccccchhhcc
Confidence 344889999999999877665532 1111111 111111
Q ss_pred -------------c----chhhhhh------ccCC-----hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCC
Q 025236 167 -------------C----SRTLKSR------MEGS-----REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGF 218 (256)
Q Consensus 167 -------------~----~~~~~~~------~~~~-----~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~ 218 (256)
. .+.+... +..+ ..+....+.+||..+...+|+.+|....+.+.+.....
T Consensus 168 g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA-- 245 (281)
T COG4757 168 GYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNA-- 245 (281)
T ss_pred ccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC--
Confidence 0 0000000 0000 12244567899999999999999999999999988763
Q ss_pred cceEEEEeCC----CCCcC-C----hHHHHHHHHHH
Q 025236 219 RDLTFRCYNG----VGHYT-V----PEEMDEVRNWL 245 (256)
Q Consensus 219 ~~~~~~~~~g----~~H~~-~----~~~~~~~~~~l 245 (256)
+.+...++. .||+- + +...++++.|+
T Consensus 246 -pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 246 -PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred -cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 455555554 48862 2 22346666665
No 136
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.06 E-value=2.4e-09 Score=75.62 Aligned_cols=175 Identities=14% Similarity=0.126 Sum_probs=106.7
Q ss_pred EEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhc
Q 025236 35 TIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLST 114 (256)
Q Consensus 35 ~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (256)
.+|++-|=|+-...=..+++.|+++|+.|+.+|... ..|. ..+.++...++..+.+.+.+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~-----------Yfw~---------~rtP~~~a~Dl~~~i~~y~~ 63 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLR-----------YFWS---------ERTPEQTAADLARIIRHYRA 63 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHH-----------HHhh---------hCCHHHHHHHHHHHHHHHHH
Confidence 577777755544444568999999999999998642 1331 12355677777777777666
Q ss_pred CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc--hhhhhhc------c--CChHHHhh
Q 025236 115 EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS--RTLKSRM------E--GSREATRR 184 (256)
Q Consensus 115 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~------~--~~~~~~~~ 184 (256)
.....++.|+|+|+|+-+.-....+.+. ....+++.++++++.-... -.....+ . .......+
T Consensus 64 ~w~~~~vvLiGYSFGADvlP~~~nrLp~-------~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~ 136 (192)
T PF06057_consen 64 RWGRKRVVLIGYSFGADVLPFIYNRLPA-------ALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAK 136 (192)
T ss_pred HhCCceEEEEeecCCchhHHHHHhhCCH-------HHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHh
Confidence 6666799999999999887777666522 1245677777765532110 0000000 0 11122334
Q ss_pred cCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 185 AASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 185 ~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
....|++.++|++|.-.... .++. ++++.+.+|| ||.+..+ ++.+.+.|.+.
T Consensus 137 l~~~~v~CiyG~~E~d~~cp-------~l~~---~~~~~i~lpG-gHHfd~d-y~~La~~Il~~ 188 (192)
T PF06057_consen 137 LPPAPVQCIYGEDEDDSLCP-------SLRQ---PGVEVIALPG-GHHFDGD-YDALAKRILDA 188 (192)
T ss_pred CCCCeEEEEEcCCCCCCcCc-------cccC---CCcEEEEcCC-CcCCCCC-HHHHHHHHHHH
Confidence 44569999999987653221 2333 3689999998 7776644 33444444333
No 137
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.04 E-value=1.4e-08 Score=81.12 Aligned_cols=65 Identities=20% Similarity=0.286 Sum_probs=50.6
Q ss_pred hhcCC-CCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcC--C-----hHHHHHHHHHHHH
Q 025236 183 RRAAS-LPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYT--V-----PEEMDEVRNWLTA 247 (256)
Q Consensus 183 ~~~~~-~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~--~-----~~~~~~~~~~l~~ 247 (256)
...++ +|+|.+-|+.|.++|+++++.+.+.+...+..+++.++.+++||.- . .+.+..+.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 34466 9999999999999999999999998744443456778887789962 1 4566888899875
No 138
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.03 E-value=8.4e-10 Score=67.60 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=44.5
Q ss_pred ecCCCCCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcc
Q 025236 26 VRPKGKHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAI 75 (256)
Q Consensus 26 ~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~ 75 (256)
+.|.++++++|+++||++.....|..+++.|++.||.|+++|++|+|.+.
T Consensus 9 w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 9 WKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred ecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 44554479999999999999999999999999999999999999998765
No 139
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=99.02 E-value=2.1e-08 Score=78.89 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=67.3
Q ss_pred ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc------------------------------
Q 025236 119 IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS------------------------------ 168 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------------ 168 (256)
.+++++|+|.||++|..+|.-. |..+.+++--|++.-..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~a-----------P~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~~~~~~~i~~ 252 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIA-----------PWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFFNFKNIRIYC 252 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhC-----------ccceeEEEecCccccchhheeeeeecCcccccccccccccCCEEEEE
Confidence 4899999999999999999854 66677777666552210
Q ss_pred --h------------------hhhhhccCCh-HHHhhc-CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEe
Q 025236 169 --R------------------TLKSRMEGSR-EATRRA-ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCY 226 (256)
Q Consensus 169 --~------------------~~~~~~~~~~-~~~~~~-~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 226 (256)
+ .++..+.... ...... .++-.+..|+..|+.+|.+.-+.+++.+++.|. +++++.+
T Consensus 253 ~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgf-da~l~lI 331 (403)
T PF11144_consen 253 FDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGF-DATLHLI 331 (403)
T ss_pred EeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCC-CeEEEEe
Confidence 0 0000000000 001122 456678889999999999999999999999999 9999988
No 140
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.96 E-value=1.1e-07 Score=74.71 Aligned_cols=196 Identities=15% Similarity=0.137 Sum_probs=113.4
Q ss_pred ceeec-CCC---CCceEEEEEccCCCCCCchHH-------HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCC
Q 025236 23 THVVR-PKG---KHQATIVWLHGLSDKGSSWSQ-------LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLS 91 (256)
Q Consensus 23 ~~~~~-~~~---~~~~~vl~~HG~~~~~~~~~~-------~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~ 91 (256)
.++++ |.+ +..|+||++||+|--...... +...+. ...+++.|+.......
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~---------------- 169 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDE---------------- 169 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccccc----------------
Confidence 44554 432 245999999998765443222 333343 5599999986532000
Q ss_pred CCCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch--
Q 025236 92 EDGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR-- 169 (256)
Q Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 169 (256)
.......++.+.++....++... ...+|.|+|-|.||.+++.++....... . ....+.+|++|||.....
T Consensus 170 -~~~~yPtQL~qlv~~Y~~Lv~~~-G~~nI~LmGDSAGGnL~Ls~LqyL~~~~---~---~~~Pk~~iLISPWv~l~~~~ 241 (374)
T PF10340_consen 170 -HGHKYPTQLRQLVATYDYLVESE-GNKNIILMGDSAGGNLALSFLQYLKKPN---K---LPYPKSAILISPWVNLVPQD 241 (374)
T ss_pred -CCCcCchHHHHHHHHHHHHHhcc-CCCeEEEEecCccHHHHHHHHHHHhhcC---C---CCCCceeEEECCCcCCcCCC
Confidence 01122445666666666666333 2359999999999999999887653211 1 123468999999965320
Q ss_pred -----h-----------------hhhhccCC---------------------hHHHhhcCCCCEEEeecCCCccccchhh
Q 025236 170 -----T-----------------LKSRMEGS---------------------REATRRAASLPILLCHGSGDDVVAYKHG 206 (256)
Q Consensus 170 -----~-----------------~~~~~~~~---------------------~~~~~~~~~~p~l~~~G~~D~~~~~~~~ 206 (256)
. +.+.+... ........+.-++++.|+++-.- +..
T Consensus 242 ~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evfr--ddI 319 (374)
T PF10340_consen 242 SQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFR--DDI 319 (374)
T ss_pred CCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccH--HHH
Confidence 0 00000000 00111123457889998887665 677
Q ss_pred HHHHHHHhhcCCc----ceEEEEeCCCCCcCCh-HHHHHHHHHHH
Q 025236 207 ERSAQTLNSVGFR----DLTFRCYNGVGHYTVP-EEMDEVRNWLT 246 (256)
Q Consensus 207 ~~~~~~l~~~~~~----~~~~~~~~g~~H~~~~-~~~~~~~~~l~ 246 (256)
+++.+.+.+.+.. ..+..+-+++.|.-.. .....+..|.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P~~~~~~~~~~W~~ 364 (374)
T PF10340_consen 320 LEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGPILNYSRDLDKWSK 364 (374)
T ss_pred HHHHHHHhhcCccccCCcceEEEecCCccccchhhhhcCHHHHhc
Confidence 8888888754421 3577777888896442 23344555544
No 141
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.96 E-value=4.4e-08 Score=80.92 Aligned_cols=195 Identities=15% Similarity=0.135 Sum_probs=123.3
Q ss_pred cccccceeecCC---CCCceEEEEEccCCC-CCC-chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCC
Q 025236 18 FEFGRTHVVRPK---GKHQATIVWLHGLSD-KGS-SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSE 92 (256)
Q Consensus 18 ~~~~~~~~~~~~---~~~~~~vl~~HG~~~-~~~-~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (256)
..++..++++.. +.+.|++|+--|.-+ +.. .|....-.|.++||......-||. |.....|+..+...
T Consensus 430 v~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG------gelG~~WYe~GK~l- 502 (682)
T COG1770 430 VQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG------GELGRAWYEDGKLL- 502 (682)
T ss_pred cEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc------cccChHHHHhhhhh-
Confidence 344444555433 346788888777433 222 344344445689988777777773 45556887754332
Q ss_pred CCCCCcccHHHHHHHHHHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh
Q 025236 93 DGPDDLEGLDASAAHVANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL 171 (256)
Q Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 171 (256)
.....+.|+.++++.|. +..+ ..++++++|-|.||++.-.++... |+.++++|+..||.+....+
T Consensus 503 ~K~NTf~DFIa~a~~Lv---~~g~~~~~~i~a~GGSAGGmLmGav~N~~-----------P~lf~~iiA~VPFVDvltTM 568 (682)
T COG1770 503 NKKNTFTDFIAAARHLV---KEGYTSPDRIVAIGGSAGGMLMGAVANMA-----------PDLFAGIIAQVPFVDVLTTM 568 (682)
T ss_pred hccccHHHHHHHHHHHH---HcCcCCccceEEeccCchhHHHHHHHhhC-----------hhhhhheeecCCccchhhhh
Confidence 23334555665555554 4433 345999999999999988888765 89999999999986522211
Q ss_pred hhh-----------ccC--Ch----------H--HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCc--ceEEE
Q 025236 172 KSR-----------MEG--SR----------E--ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFR--DLTFR 224 (256)
Q Consensus 172 ~~~-----------~~~--~~----------~--~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~ 224 (256)
.+. +.. .+ . -.....-+++|++.|-.|+.|.+....++..+|++.+.. ++-+.
T Consensus 569 lD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlk 648 (682)
T COG1770 569 LDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLK 648 (682)
T ss_pred cCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEE
Confidence 111 000 00 0 011234478999999999999999888999999876652 24444
Q ss_pred EeCCCCCcC
Q 025236 225 CYNGVGHYT 233 (256)
Q Consensus 225 ~~~g~~H~~ 233 (256)
+--.+||.-
T Consensus 649 t~M~aGHgG 657 (682)
T COG1770 649 TNMDAGHGG 657 (682)
T ss_pred ecccccCCC
Confidence 545689963
No 142
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.95 E-value=7.4e-08 Score=70.26 Aligned_cols=102 Identities=17% Similarity=0.250 Sum_probs=64.2
Q ss_pred CCCCceEEEEEccCCCCCCchHHHhhhcCCC---CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 29 KGKHQATIVWLHGLSDKGSSWSQLLETLPLP---NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 29 ~~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~---g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
.+.+++.|+++.|..+....|..+++.|... ...+..+...+|- .-+ .+ ..........+.-++++.+
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~--~~P---~s----l~~~~s~~~~eifsL~~QV 95 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHA--LMP---AS----LREDHSHTNEEIFSLQDQV 95 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccc--cCC---cc----cccccccccccccchhhHH
Confidence 4577899999999999999999988877521 1345555444431 100 00 0001111122344566666
Q ss_pred HHHHHHHhcCC-CCceeEEeEeCchhHHHHHHHHH
Q 025236 106 AHVANLLSTEP-ADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 106 ~~l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
++=.+++++.. .+.+++++|||-|+++.+.+...
T Consensus 96 ~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 96 DHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhh
Confidence 66566665543 34689999999999999999874
No 143
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.93 E-value=3.3e-08 Score=92.17 Aligned_cols=183 Identities=15% Similarity=0.126 Sum_probs=112.5
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLL 112 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (256)
.+.++++||++++...|..+.+.|. .++.|+.++.++++... ....++.+.++.+.+.+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~--------------------~~~~~l~~la~~~~~~i 1126 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPM--------------------QTATSLDEVCEAHLATL 1126 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCC--------------------CCCCCHHHHHHHHHHHH
Confidence 4679999999999999999999997 67999999988753110 01234566666666666
Q ss_pred hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc-----------------------h
Q 025236 113 STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS-----------------------R 169 (256)
Q Consensus 113 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------------------~ 169 (256)
.......++.++||||||.++..+|.+.... +..+..++.+.++.+.. .
T Consensus 1127 ~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~--------~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1198 (1296)
T PRK10252 1127 LEQQPHGPYHLLGYSLGGTLAQGIAARLRAR--------GEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDRERE 1198 (1296)
T ss_pred HhhCCCCCEEEEEechhhHHHHHHHHHHHHc--------CCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHH
Confidence 5433445899999999999999999875321 33444444443322100 0
Q ss_pred hhhhhc-cCC--------h---H--------HHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCC
Q 025236 170 TLKSRM-EGS--------R---E--------ATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGV 229 (256)
Q Consensus 170 ~~~~~~-~~~--------~---~--------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 229 (256)
...... ... . . ........|++++.+..|...+......+.+.. . .++...++|
T Consensus 1199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~----~~~~~~v~g- 1272 (1296)
T PRK10252 1199 AFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-A----ELDVYRQDC- 1272 (1296)
T ss_pred HHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-C----CCEEEECCC-
Confidence 000000 000 0 0 011234578999999988766554444443332 2 567778875
Q ss_pred CCcCC--hHHHHHHHHHHHHHhh
Q 025236 230 GHYTV--PEEMDEVRNWLTARLE 250 (256)
Q Consensus 230 ~H~~~--~~~~~~~~~~l~~~l~ 250 (256)
+|..+ ++....+.+++.+.+.
T Consensus 1273 ~H~~~~~~~~~~~~~~~l~~~l~ 1295 (1296)
T PRK10252 1273 AHVDIISPEAFEKIGPILRATLN 1295 (1296)
T ss_pred CHHHHCCcHHHHHHHHHHHHHhc
Confidence 99754 4556777777776543
No 144
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.90 E-value=1.2e-06 Score=68.54 Aligned_cols=202 Identities=14% Similarity=0.105 Sum_probs=116.0
Q ss_pred CCCceEEEEEccCCCCCC---chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccc----cccccCCCCCC---------
Q 025236 30 GKHQATIVWLHGLSDKGS---SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCT----AWFDVGDLSED--------- 93 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~--------- 93 (256)
++++.+||++||.|.+.. ....+.+.|.+.||.++.+..+.--.......... .--........
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 456789999999998765 34567788899999999987765110000000000 00000000000
Q ss_pred -----CCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc
Q 025236 94 -----GPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS 168 (256)
Q Consensus 94 -----~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 168 (256)
.....+.+...++.+.+++... ...+++|+||+.|++.++.+.... ....+.++|.++++.+..
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~----------~~~~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEK----------PPPMPDALVLINAYWPQP 232 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcC----------CCcccCeEEEEeCCCCcc
Confidence 0001123333444444444443 334699999999999999999864 244588999999998866
Q ss_pred hhhhhhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hH-HHHHHHHHH
Q 025236 169 RTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PE-EMDEVRNWL 245 (256)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~-~~~~~~~~l 245 (256)
..-. .........++|+|=+++..... ....++.=....+.......+-+.+.+..|... .+ ..+.|.-|+
T Consensus 233 ~~n~-----~l~~~la~l~iPvLDi~~~~~~~-~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL 306 (310)
T PF12048_consen 233 DRNP-----ALAEQLAQLKIPVLDIYSADNPA-SQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWL 306 (310)
T ss_pred hhhh-----hHHHHhhccCCCEEEEecCCChH-HHHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHH
Confidence 5311 11223456789999999887332 223222222222232223577777787766543 23 557777777
Q ss_pred HHH
Q 025236 246 TAR 248 (256)
Q Consensus 246 ~~~ 248 (256)
+++
T Consensus 307 ~~~ 309 (310)
T PF12048_consen 307 KRH 309 (310)
T ss_pred Hhh
Confidence 653
No 145
>COG3150 Predicted esterase [General function prediction only]
Probab=98.88 E-value=9.7e-08 Score=65.31 Aligned_cols=158 Identities=16% Similarity=0.190 Sum_probs=88.7
Q ss_pred EEEEccCCCCCCchHH--HhhhcCCCC--eEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 36 IVWLHGLSDKGSSWSQ--LLETLPLPN--IKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 36 vl~~HG~~~~~~~~~~--~~~~l~~~g--~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
||++||+.++..+.+. +.+.+...+ ..+.++.. ..+...+++.+.+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l-----------------------------~h~p~~a~~ele~~ 52 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHL-----------------------------PHDPQQALKELEKA 52 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCC-----------------------------CCCHHHHHHHHHHH
Confidence 8999999998887665 334443222 23333322 22356667777777
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCCh------------
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSR------------ 179 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------ 179 (256)
+.+..+. ...|+|.|+||+-|..++.+. .+++++......|. +.+...+....
T Consensus 53 i~~~~~~-~p~ivGssLGGY~At~l~~~~-------------Girav~~NPav~P~-e~l~gylg~~en~ytg~~y~le~ 117 (191)
T COG3150 53 VQELGDE-SPLIVGSSLGGYYATWLGFLC-------------GIRAVVFNPAVRPY-ELLTGYLGRPENPYTGQEYVLES 117 (191)
T ss_pred HHHcCCC-CceEEeecchHHHHHHHHHHh-------------CChhhhcCCCcCch-hhhhhhcCCCCCCCCcceEEeeh
Confidence 7665444 589999999999999999864 23333322111111 11111111000
Q ss_pred ----H----HHhhcCCCCEEEeecCC-CccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--hHHHHHHHHHH
Q 025236 180 ----E----ATRRAASLPILLCHGSG-DDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--PEEMDEVRNWL 245 (256)
Q Consensus 180 ----~----~~~~~~~~p~l~~~G~~-D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 245 (256)
. ......+...+.+.... |++..+..+.+.+. .+...+.+|.+|.|. ...++.|+.|.
T Consensus 118 ~hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~--------~~~~~V~dgg~H~F~~f~~~l~~i~aF~ 186 (191)
T COG3150 118 RHIATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYH--------PCYEIVWDGGDHKFKGFSRHLQRIKAFK 186 (191)
T ss_pred hhHHHHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhh--------hhhheeecCCCccccchHHhHHHHHHHh
Confidence 0 01112233445555544 99986654443333 456677778899876 45577777775
No 146
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.87 E-value=7.8e-08 Score=72.53 Aligned_cols=173 Identities=14% Similarity=0.110 Sum_probs=96.7
Q ss_pred CCceEEEEEccCC--CCCC---chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 31 KHQATIVWLHGLS--DKGS---SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 31 ~~~~~vl~~HG~~--~~~~---~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
.+.|+++++||-. .+.. .+..++..=.-+...+|.+|.-.-- ..+ .....+........
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~---------~R~-------~~~~~n~~~~~~L~ 159 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVK---------KRR-------EELHCNEAYWRFLA 159 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHH---------HHH-------HHhcccHHHHHHHH
Confidence 5679999999932 2222 2222222222345677777664210 000 00011222233344
Q ss_pred HHHHHHHhcCCC----CceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh--hhhccC--
Q 025236 106 AHVANLLSTEPA----DIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL--KSRMEG-- 177 (256)
Q Consensus 106 ~~l~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~-- 177 (256)
..|.-++++.++ ...-+|+|.|+||.+++..+.+. |+.|..++..||.+.....- .+....
T Consensus 160 ~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~-----------Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~ 228 (299)
T COG2382 160 QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRH-----------PERFGHVLSQSGSFWWTPLDTQPQGEVAES 228 (299)
T ss_pred HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcC-----------chhhceeeccCCccccCccccccccchhhh
Confidence 444444544332 35789999999999999999965 99999999999976432111 000000
Q ss_pred ChHHHhh-cCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 178 SREATRR-AASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 178 ~~~~~~~-~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
....... ....-++...++.+.+. ...+.+++.|++.+. +..+..|+| ||...
T Consensus 229 l~~~~a~~~~~~~~l~~g~~~~~~~--~pNr~L~~~L~~~g~-~~~yre~~G-gHdw~ 282 (299)
T COG2382 229 LKILHAIGTDERIVLTTGGEEGDFL--RPNRALAAQLEKKGI-PYYYREYPG-GHDWA 282 (299)
T ss_pred hhhhhccCccceEEeecCCcccccc--chhHHHHHHHHhcCC-cceeeecCC-CCchh
Confidence 0001111 11222333333344444 455789999999998 899999998 99643
No 147
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.82 E-value=3.3e-08 Score=80.67 Aligned_cols=196 Identities=19% Similarity=0.166 Sum_probs=124.1
Q ss_pred CceEEEEEccCCCCC--CchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKG--SSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~--~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
+.|++|+--|+-.-+ -.|......+.++|-..+..+.||.| .-.+.|.... ...+....++|+.+.+++|
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGG------EfGp~WH~Aa-~k~nrq~vfdDf~AVaedL- 491 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGG------EFGPEWHQAG-MKENKQNVFDDFIAVAEDL- 491 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCC------ccCHHHHHHH-hhhcchhhhHHHHHHHHHH-
Confidence 577777665543222 23455446666789899999999853 3334564332 1122223344455444444
Q ss_pred HHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh--------hhhhc-----
Q 025236 110 NLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT--------LKSRM----- 175 (256)
Q Consensus 110 ~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~~~~----- 175 (256)
+.+.. .++++++.|-|-||.++-.+..++ |+.+.++|+-.|.+++.+. +...+
T Consensus 492 --i~rgitspe~lgi~GgSNGGLLvg~alTQr-----------PelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~ 558 (648)
T COG1505 492 --IKRGITSPEKLGIQGGSNGGLLVGAALTQR-----------PELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDD 558 (648)
T ss_pred --HHhCCCCHHHhhhccCCCCceEEEeeeccC-----------hhhhCceeeccchhhhhhhcccccchhhHhhcCCCCC
Confidence 44433 446899999999999988877765 8888888888776543211 11111
Q ss_pred ----------cCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh------HHHH
Q 025236 176 ----------EGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP------EEMD 239 (256)
Q Consensus 176 ----------~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~------~~~~ 239 (256)
...........=+|+||..+..|.-|.+.++++++.+|++.+. ++-+.+--++||.-.. +...
T Consensus 559 P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~-pv~~~e~t~gGH~g~~~~~~~A~~~a 637 (648)
T COG1505 559 PEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA-PVLLREETKGGHGGAAPTAEIARELA 637 (648)
T ss_pred HHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC-ceEEEeecCCcccCCCChHHHHHHHH
Confidence 1101111112336999999999999999999999999999986 6666666667998542 2345
Q ss_pred HHHHHHHHHh
Q 025236 240 EVRNWLTARL 249 (256)
Q Consensus 240 ~~~~~l~~~l 249 (256)
.+..||.+.|
T Consensus 638 ~~~afl~r~L 647 (648)
T COG1505 638 DLLAFLLRTL 647 (648)
T ss_pred HHHHHHHHhh
Confidence 6677777765
No 148
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=1.5e-07 Score=77.48 Aligned_cols=200 Identities=15% Similarity=0.106 Sum_probs=122.9
Q ss_pred CCceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
..+|.+|+.+|.-+-+- .|..-...|.+.|+.....|.||.| .....|..-+. .......++++...++.|
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGG------e~G~~WHk~G~-lakKqN~f~Dfia~AeyL 540 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGG------EYGEQWHKDGR-LAKKQNSFDDFIACAEYL 540 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCc------ccccchhhccc-hhhhcccHHHHHHHHHHH
Confidence 36788888877433221 2333333445789999999999854 33345644322 222233345555555544
Q ss_pred HHHHhcC-CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhcc-----------
Q 025236 109 ANLLSTE-PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRME----------- 176 (256)
Q Consensus 109 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------- 176 (256)
+... ..+++..+.|.|.||.++..+.-++ |..+.++|+--|+++.-......+-
T Consensus 541 ---ve~gyt~~~kL~i~G~SaGGlLvga~iN~r-----------PdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g 606 (712)
T KOG2237|consen 541 ---VENGYTQPSKLAIEGGSAGGLLVGACINQR-----------PDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWG 606 (712)
T ss_pred ---HHcCCCCccceeEecccCccchhHHHhccC-----------chHhhhhhhcCcceehhhhhccCccccchhhhcccC
Confidence 4443 3346999999999999998888765 8889999888887653221111100
Q ss_pred C----------Ch-----HHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCC------cceEEEEeCCCCCcCC-
Q 025236 177 G----------SR-----EATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGF------RDLTFRCYNGVGHYTV- 234 (256)
Q Consensus 177 ~----------~~-----~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~g~~H~~~- 234 (256)
. .+ .......=+-+|+..+.+|..|++.++.++.++++..-. +++-+.+..++||..-
T Consensus 607 ~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~ 686 (712)
T KOG2237|consen 607 NPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEK 686 (712)
T ss_pred ChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCC
Confidence 0 00 000011124588999999988888888888888774211 3467888899999854
Q ss_pred -----hHHHHHHHHHHHHHhhh
Q 025236 235 -----PEEMDEVRNWLTARLEL 251 (256)
Q Consensus 235 -----~~~~~~~~~~l~~~l~~ 251 (256)
-++.....+||.+.++.
T Consensus 687 ~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 687 PRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred chHHHHHHHHHHHHHHHHHhcC
Confidence 23455667788777654
No 149
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.78 E-value=4.6e-08 Score=78.06 Aligned_cols=101 Identities=19% Similarity=0.128 Sum_probs=66.9
Q ss_pred CCceEEEEEccCCCCCCchHH------HhhhcCCCCeEEEeeCCCCCCCcccCCCc----cc-cccccCCCCCCCCCCcc
Q 025236 31 KHQATIVWLHGLSDKGSSWSQ------LLETLPLPNIKWICPTAPTRPVAIFGGYP----CT-AWFDVGDLSEDGPDDLE 99 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~------~~~~l~~~g~~vi~~d~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 99 (256)
.++|+|++.||.-.++..|.. ++-.|++.||.|-.-+.||...+...-.. .. .| ++. .. .....
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW-~FS-~~---Em~~y 145 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFW-DFS-WH---EMGTY 145 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCccee-ecc-hh---hhhhc
Confidence 788999999999888887764 55567799999999999876444322110 11 22 111 00 01134
Q ss_pred cHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 100 GLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
|+-+.++.+.+. ....++..+|||+|+...+.++...
T Consensus 146 DLPA~IdyIL~~----T~~~kl~yvGHSQGtt~~fv~lS~~ 182 (403)
T KOG2624|consen 146 DLPAMIDYILEK----TGQEKLHYVGHSQGTTTFFVMLSER 182 (403)
T ss_pred CHHHHHHHHHHh----ccccceEEEEEEccchhheehhccc
Confidence 555555555543 3445999999999999998887765
No 150
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.74 E-value=3e-08 Score=79.56 Aligned_cols=119 Identities=15% Similarity=0.047 Sum_probs=77.5
Q ss_pred CCCceEEEEEccCCCCC---CchHHHhhhcCCCC-eEEEeeCCCCCCCcccCCCccccccccCCCC--CCC--CCCcccH
Q 025236 30 GKHQATIVWLHGLSDKG---SSWSQLLETLPLPN-IKWICPTAPTRPVAIFGGYPCTAWFDVGDLS--EDG--PDDLEGL 101 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~---~~~~~~~~~l~~~g-~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~ 101 (256)
.++.|+|||+||++-.. .....-...|+.+| +.||.+++|..-. .|.+..... ... ..-..|.
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~l---------GfL~~~~~~~~~~~~~n~Gl~Dq 161 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGAL---------GFLDLSSLDTEDAFASNLGLLDQ 161 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccc---------eeeehhhccccccccccccHHHH
Confidence 45679999999975432 22223345566677 9999999986422 222222222 111 1234567
Q ss_pred HHHHHHHHHHHhcC-CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 102 DASAAHVANLLSTE-PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 102 ~~~~~~l~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
..+++++.+.|..- .+.++|.|+|+|.|++.++.+++- ......+..+|..|+...
T Consensus 162 ilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~---------P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 162 ILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV---------PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC---------ccchHHHHHHHHhCCCCC
Confidence 77888888888763 455799999999999998887763 133456777788887654
No 151
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.71 E-value=3.4e-07 Score=69.17 Aligned_cols=179 Identities=15% Similarity=0.132 Sum_probs=100.5
Q ss_pred CCceEEEEEccCCCCCCc-hHHHhh-----hcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 31 KHQATIVWLHGLSDKGSS-WSQLLE-----TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~-~~~~~~-----~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
.++|++|-+|..|-|... |..+.. .+ .+.|.++-+|.||+..+...- .. .....++++.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i-~~~f~i~Hi~aPGqe~ga~~~------------p~--~y~yPsmd~L 85 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEI-LQNFCIYHIDAPGQEEGAATL------------PE--GYQYPSMDQL 85 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHH-HTTSEEEEEE-TTTSTT-----------------T--T-----HHHH
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHH-hhceEEEEEeCCCCCCCcccc------------cc--cccccCHHHH
Confidence 369999999999988765 665443 22 378999999999875432110 00 1123334444
Q ss_pred HHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch---------------
Q 025236 105 AAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR--------------- 169 (256)
Q Consensus 105 ~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------- 169 (256)
++.+.+.+... .-+.++-+|--.|+++-.++|..+ |+++.|+|++++......
T Consensus 86 Ae~l~~Vl~~f-~lk~vIg~GvGAGAnIL~rfAl~~-----------p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~ 153 (283)
T PF03096_consen 86 AEMLPEVLDHF-GLKSVIGFGVGAGANILARFALKH-----------PERVLGLILVNPTCTAAGWMEWFYQKLSSWLLY 153 (283)
T ss_dssp HCTHHHHHHHH-T---EEEEEETHHHHHHHHHHHHS-----------GGGEEEEEEES---S---HHHHHHHHHH-----
T ss_pred HHHHHHHHHhC-CccEEEEEeeccchhhhhhccccC-----------ccceeEEEEEecCCCCccHHHHHHHHHhccccc
Confidence 44444433321 223789999999999999999965 999999999966422100
Q ss_pred ------------------------------hhhhhccC------------------ChHHHhhcCCCCEEEeecCCCccc
Q 025236 170 ------------------------------TLKSRMEG------------------SREATRRAASLPILLCHGSGDDVV 201 (256)
Q Consensus 170 ------------------------------~~~~~~~~------------------~~~~~~~~~~~p~l~~~G~~D~~~ 201 (256)
.+...+.. +.........+|+|++.|+.-+..
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~ 233 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV 233 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH
T ss_pred ccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch
Confidence 00000000 000122334699999999999887
Q ss_pred cchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHH
Q 025236 202 AYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEV 241 (256)
Q Consensus 202 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~ 241 (256)
+.+.++..++.. ...++..++++|=....|...++
T Consensus 234 --~~vv~~ns~Ldp---~~ttllkv~dcGglV~eEqP~kl 268 (283)
T PF03096_consen 234 --DDVVEMNSKLDP---TKTTLLKVADCGGLVLEEQPGKL 268 (283)
T ss_dssp --HHHHHHHHHS-C---CCEEEEEETT-TT-HHHH-HHHH
T ss_pred --hhHHHHHhhcCc---ccceEEEecccCCcccccCcHHH
Confidence 677888888865 46899999999887775554333
No 152
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.69 E-value=6.6e-07 Score=67.09 Aligned_cols=147 Identities=16% Similarity=0.136 Sum_probs=86.1
Q ss_pred CCceEEEEEccCCCCCCchH----HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWS----QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAA 106 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~----~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (256)
+.+.++||+||+..+...-. .+...+..++ .++.+..|..+... . ...+.+.......
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~~~-------~----------Y~~d~~~a~~s~~ 77 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPG-VVILFSWPSDGSLL-------G----------YFYDRESARFSGP 77 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCChh-------h----------hhhhhhhHHHHHH
Confidence 45679999999988754322 2333333334 78888777543211 0 1111222333333
Q ss_pred HHHHHH---hcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHh
Q 025236 107 HVANLL---STEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATR 183 (256)
Q Consensus 107 ~l~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 183 (256)
.+.+++ .......+|.|++||||+.+.+.+.......... .....++..+++.+|-++... +..... ..
T Consensus 78 ~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d~-f~~~~~-----~~ 149 (233)
T PF05990_consen 78 ALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDNDV-FRSQLP-----DL 149 (233)
T ss_pred HHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHHH-HHHHHH-----HH
Confidence 333333 3333456999999999999999987764322110 011236788999998887643 222211 22
Q ss_pred hcCCCCEEEeecCCCccccc
Q 025236 184 RAASLPILLCHGSGDDVVAY 203 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~ 203 (256)
.....++.+.+..+|.....
T Consensus 150 ~~~~~~itvy~s~~D~AL~~ 169 (233)
T PF05990_consen 150 GSSARRITVYYSRNDRALKA 169 (233)
T ss_pred hhcCCCEEEEEcCCchHHHH
Confidence 33447999999999988743
No 153
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.68 E-value=2.3e-07 Score=73.03 Aligned_cols=65 Identities=18% Similarity=0.287 Sum_probs=46.8
Q ss_pred hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC----h-----H----HHHHHHHHHHHHh
Q 025236 183 RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV----P-----E----EMDEVRNWLTARL 249 (256)
Q Consensus 183 ~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~-----~----~~~~~~~~l~~~l 249 (256)
...+++|++++.|++|.++|++......+.+.. +++++..+ +||.-. + + ......+|+.+.-
T Consensus 326 L~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g----~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 326 LGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG----EVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred hhhcccceEEEeecccccCCHHHHHHHHHhcCC----ceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 345789999999999999999988888887753 57888777 599521 0 1 1236777887654
Q ss_pred hhc
Q 025236 250 ELE 252 (256)
Q Consensus 250 ~~~ 252 (256)
+.+
T Consensus 401 ~~~ 403 (445)
T COG3243 401 EHP 403 (445)
T ss_pred cCC
Confidence 443
No 154
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.65 E-value=1.7e-07 Score=73.13 Aligned_cols=59 Identities=27% Similarity=0.497 Sum_probs=48.9
Q ss_pred CCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC----h---HHHHHHHHHHHHHh
Q 025236 188 LPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV----P---EEMDEVRNWLTARL 249 (256)
Q Consensus 188 ~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~---~~~~~~~~~l~~~l 249 (256)
.|+|++||..|..+|...++.+++..... +.+...+++++|... . +.+..+.+|+.+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER---PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC---CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999998752 468888888899754 2 45688888988765
No 155
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.65 E-value=7.4e-08 Score=80.82 Aligned_cols=116 Identities=18% Similarity=0.161 Sum_probs=71.2
Q ss_pred CCCceEEEEEccCCCC---CCchHHHhhhcC-CC-CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 30 GKHQATIVWLHGLSDK---GSSWSQLLETLP-LP-NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~---~~~~~~~~~~l~-~~-g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
+++.|+||++||++.. ...+ ....++ .. ++.|+.+++|....+-. ...........-..|...+
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~---------~~~~~~~~~n~g~~D~~~a 160 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFL---------STGDIELPGNYGLKDQRLA 160 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccc---------cCCCCCCCcchhHHHHHHH
Confidence 3567999999996532 2211 112222 22 49999999985322110 0000111112235677788
Q ss_pred HHHHHHHHhc-CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC
Q 025236 105 AAHVANLLST-EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL 165 (256)
Q Consensus 105 ~~~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 165 (256)
++++.+.+.. ..+.++|.|+|+|.||+++..++... ..+..+.++|..||..
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~---------~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSP---------DSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCc---------chhHHHHHHhhhcCCc
Confidence 8888888765 34567999999999999998887742 1234577777777643
No 156
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.64 E-value=2.8e-06 Score=63.42 Aligned_cols=125 Identities=18% Similarity=0.189 Sum_probs=73.2
Q ss_pred HHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhh-hhhccCChHHH
Q 025236 106 AHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTL-KSRMEGSREAT 182 (256)
Q Consensus 106 ~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~ 182 (256)
+.+.-++.+. .+.++.+++|||+||.+++.+.+. +|..|...+++||-+...... ......... .
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~-----------~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~-~ 189 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLT-----------YPDCFGRYGLISPSLWWHNEAILREIESLKL-L 189 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhc-----------CcchhceeeeecchhhhCCHHHhcccccccc-C
Confidence 3444444442 334679999999999999999984 489999999999855433221 111111111 1
Q ss_pred hhcCCCCEEEeecCC--Cc---cccc---hhhHHHHHHHhh-cCCcceEEEEeCCCCCcCC-hHHHHHHHHHHH
Q 025236 183 RRAASLPILLCHGSG--DD---VVAY---KHGERSAQTLNS-VGFRDLTFRCYNGVGHYTV-PEEMDEVRNWLT 246 (256)
Q Consensus 183 ~~~~~~p~l~~~G~~--D~---~~~~---~~~~~~~~~l~~-~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~ 246 (256)
. +.++.+.-|.. |. .... ..+.+..+.+++ .|. ...+..+++.+|.-. ...+..++.|+.
T Consensus 190 --~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~f~~~~~~~H~~~~~~~~~~al~~l~ 259 (264)
T COG2819 190 --K-TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGA-RLVFQEEPLEHHGSVIHASLPSALRFLD 259 (264)
T ss_pred --C-CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCC-ceEecccccccccchHHHHHHHHHHhhh
Confidence 1 44555555543 32 2222 233344444555 665 788889998888733 444555555553
No 157
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.63 E-value=3.9e-07 Score=68.56 Aligned_cols=87 Identities=18% Similarity=0.171 Sum_probs=68.2
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
|+|+++|+.++....|..+...+.. ...|+..+.++-+. ......++++.++...+.|.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~--------------------~~~~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGA--------------------GEQPFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCcccc--------------------cccccCCHHHHHHHHHHHHH
Confidence 5799999999999999999999984 48888888775211 01224457777777777776
Q ss_pred cCCCCceeEEeEeCchhHHHHHHHHHhh
Q 025236 114 TEPADIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 114 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
...+..++.|.|+|+||.+|..+|.+..
T Consensus 60 ~~QP~GPy~L~G~S~GG~vA~evA~qL~ 87 (257)
T COG3319 60 RVQPEGPYVLLGWSLGGAVAFEVAAQLE 87 (257)
T ss_pred HhCCCCCEEEEeeccccHHHHHHHHHHH
Confidence 6666679999999999999999999863
No 158
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.61 E-value=1.4e-06 Score=70.41 Aligned_cols=105 Identities=18% Similarity=0.159 Sum_probs=61.0
Q ss_pred CCccccccceeecCCC-----CCceEEEEE----ccC--CCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCcccc
Q 025236 15 RRPFEFGRTHVVRPKG-----KHQATIVWL----HGL--SDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTA 83 (256)
Q Consensus 15 ~~~~~~~~~~~~~~~~-----~~~~~vl~~----HG~--~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~ 83 (256)
.++.+|...-+.+|.+ .++|.||+= ||- |+.+. =..+...|. .|+.|+++.+.-
T Consensus 46 ~rPvNYaLlrI~pp~~~~~d~~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~-~GHPvYFV~F~p------------- 110 (581)
T PF11339_consen 46 PRPVNYALLRITPPEGVPVDPTKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALR-AGHPVYFVGFFP------------- 110 (581)
T ss_pred CCCcceeEEEeECCCCCCCCCCCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHH-cCCCeEEEEecC-------------
Confidence 4556666666666653 345666654 442 22222 123555565 688888875531
Q ss_pred ccccCCCCCCCCCCcccHHHHHHHHHHHHhc-CCCCceeEEeEeCchhHHHHHHHHHhh
Q 025236 84 WFDVGDLSEDGPDDLEGLDASAAHVANLLST-EPADIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
.+..-+..+++..+...+.+.+.. +.+..+..|+|.|+||..++.+|+..+
T Consensus 111 -------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 111 -------EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred -------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 111123455555544444444433 333348999999999999999999764
No 159
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.59 E-value=6.3e-08 Score=76.09 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=61.2
Q ss_pred CCceEEEEEccCCCCC--CchHH-Hhhh-cCC--CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH
Q 025236 31 KHQATIVWLHGLSDKG--SSWSQ-LLET-LPL--PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS 104 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~--~~~~~-~~~~-l~~--~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (256)
..+|++|++|||..+. ..|.. +.+. +.. .++.|+++|....- ... +.. .......+...
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a---~~~------Y~~------a~~n~~~vg~~ 133 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA---SNN------YPQ------AVANTRLVGRQ 133 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH---SS-------HHH------HHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc---ccc------ccc------hhhhHHHHHHH
Confidence 4689999999999887 34443 4443 444 58999999884210 000 000 00011223333
Q ss_pred HHHHHHHHh--cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc
Q 025236 105 AAHVANLLS--TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS 168 (256)
Q Consensus 105 ~~~l~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 168 (256)
+..+...+. ...+.+++.|+|||+||++|-.++.... ...++..+.++.|.-|..
T Consensus 134 la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~---------~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 134 LAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLK---------GGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTT---------T---SSEEEEES-B-TTT
T ss_pred HHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhcc---------CcceeeEEEecCcccccc
Confidence 333333332 2355679999999999999999988751 123788888888766644
No 160
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.53 E-value=7.4e-06 Score=61.58 Aligned_cols=172 Identities=15% Similarity=0.085 Sum_probs=107.2
Q ss_pred CceEEEEEccCCCCCCc-hHHHhh-----hcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 32 HQATIVWLHGLSDKGSS-WSQLLE-----TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~-~~~~~~-----~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
++|++|-.|..|-+... |..+.. .+.+ .|.++-+|.+|+-.+... ... .....++++..
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~------------~p~--~y~yPsmd~LA 109 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPS------------FPE--GYPYPSMDDLA 109 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCcc------------CCC--CCCCCCHHHHH
Confidence 68889999999988765 555432 2333 499999999987433210 000 11133344444
Q ss_pred HHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch----------------
Q 025236 106 AHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR---------------- 169 (256)
Q Consensus 106 ~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------- 169 (256)
+.|...+.. +.-+.++-+|--.|+++-.++|+.+ |+++-|+|+++.......
T Consensus 110 d~l~~VL~~-f~lk~vIg~GvGAGAyIL~rFAl~h-----------p~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~ 177 (326)
T KOG2931|consen 110 DMLPEVLDH-FGLKSVIGMGVGAGAYILARFALNH-----------PERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYY 177 (326)
T ss_pred HHHHHHHHh-cCcceEEEecccccHHHHHHHHhcC-----------hhheeEEEEEecCCCCchHHHHHHHHHHHHHHHh
Confidence 444444432 2333788899999999999999965 999999998855321000
Q ss_pred -----------------------------hhhhhccC------------------ChHHHhh----cCCCCEEEeecCCC
Q 025236 170 -----------------------------TLKSRMEG------------------SREATRR----AASLPILLCHGSGD 198 (256)
Q Consensus 170 -----------------------------~~~~~~~~------------------~~~~~~~----~~~~p~l~~~G~~D 198 (256)
.+...+.. +...... ..++|+|++.|+.-
T Consensus 178 ~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~S 257 (326)
T KOG2931|consen 178 YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNS 257 (326)
T ss_pred hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCC
Confidence 00000000 0000111 34599999999998
Q ss_pred ccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCCh
Q 025236 199 DVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVP 235 (256)
Q Consensus 199 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 235 (256)
+.+ +.+.++..++.. ....+..+.++|=....
T Consensus 258 p~~--~~vv~~n~~Ldp---~~ttllk~~d~g~l~~e 289 (326)
T KOG2931|consen 258 PHV--SAVVECNSKLDP---TYTTLLKMADCGGLVQE 289 (326)
T ss_pred chh--hhhhhhhcccCc---ccceEEEEcccCCcccc
Confidence 877 566777777765 46788999888876654
No 161
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.51 E-value=1.5e-05 Score=63.22 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=131.8
Q ss_pred cccccceeecCC-CCCceEEEEEccCCC------CCCchHHHhhhcC-CCC-eEEEeeCCCCCCCcccC-C-------Cc
Q 025236 18 FEFGRTHVVRPK-GKHQATIVWLHGLSD------KGSSWSQLLETLP-LPN-IKWICPTAPTRPVAIFG-G-------YP 80 (256)
Q Consensus 18 ~~~~~~~~~~~~-~~~~~~vl~~HG~~~------~~~~~~~~~~~l~-~~g-~~vi~~d~~~~~~~~~~-~-------~~ 80 (256)
..+...++++.. ......+|++-|+.. ...........++ ..| ..++..+-|.++..-.+ + .-
T Consensus 48 W~H~l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iI 127 (367)
T PF10142_consen 48 WWHWLTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAII 127 (367)
T ss_pred CEEEEEEEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHH
Confidence 344444555555 456678999988661 1112233444444 334 34444455555442211 1 11
Q ss_pred cccccccCC-CCCCCCC---CcccHHHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccC
Q 025236 81 CTAWFDVGD-LSEDGPD---DLEGLDASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVN 154 (256)
Q Consensus 81 ~~~~~~~~~-~~~~~~~---~~~~~~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~ 154 (256)
..+|..+-+ .....+. .......+++.+.+++++. ..-++++|.|.|==|..++..|+. +++
T Consensus 128 AytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~------------D~R 195 (367)
T PF10142_consen 128 AYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV------------DPR 195 (367)
T ss_pred HHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc------------Ccc
Confidence 123322211 1111111 1234455566666666543 334699999999999999999984 678
Q ss_pred cceEEEecc-CCCcchhhh-----------------------hhcc----------CChHHHhhcCCCCEEEeecCCCcc
Q 025236 155 LSAIVGLSG-WLPCSRTLK-----------------------SRME----------GSREATRRAASLPILLCHGSGDDV 200 (256)
Q Consensus 155 ~~~~v~~~~-~~~~~~~~~-----------------------~~~~----------~~~~~~~~~~~~p~l~~~G~~D~~ 200 (256)
+++++.+.- .+.....+. ..+. .++.....+.+.|-+++.|+.|+.
T Consensus 196 V~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeF 275 (367)
T PF10142_consen 196 VKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEF 275 (367)
T ss_pred eeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCce
Confidence 888876621 111110000 0000 012223456699999999999999
Q ss_pred ccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-hHHHHHHHHHHHHHhhhcc
Q 025236 201 VAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-PEEMDEVRNWLTARLELEG 253 (256)
Q Consensus 201 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~~ 253 (256)
..++.+..+++.|.. +..+..+|+++|... .+..+.+..|+...+....
T Consensus 276 f~pD~~~~y~d~L~G----~K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 276 FVPDSSNFYYDKLPG----EKYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNGRP 325 (367)
T ss_pred eccCchHHHHhhCCC----CeeEEeCCCCCcccchHHHHHHHHHHHHHHHcCCC
Confidence 999999999999986 789999999999866 5567889999988776543
No 162
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.50 E-value=8.8e-06 Score=61.64 Aligned_cols=188 Identities=16% Similarity=0.195 Sum_probs=110.9
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
|+||++-=.+..........+...++|+.++.+-.+... ..| . ...+...++.+.+.+.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~---------~~~-------~-----~~~~~~~~~~l~~~l~ 59 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPAD---------FFW-------P-----SKRLAPAADKLLELLS 59 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHH---------Hee-------e-----ccchHHHHHHHHHHhh
Confidence 344444444455556666777777799999998554210 000 0 1346666677777665
Q ss_pred cCCCC--ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC-Cc----chhhhhhccCC--------
Q 025236 114 TEPAD--IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL-PC----SRTLKSRMEGS-------- 178 (256)
Q Consensus 114 ~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~----~~~~~~~~~~~-------- 178 (256)
+.... .++.+-.+|.||...+......-...... ....++++|+|.=|..- .. ...+.......
T Consensus 60 ~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~-~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (240)
T PF05705_consen 60 DSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKF-GKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPL 138 (240)
T ss_pred hhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccc-cccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHH
Confidence 54333 28999999998887776655321110000 01123366666544321 00 00000000000
Q ss_pred -------------------------------hHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeC
Q 025236 179 -------------------------------REATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYN 227 (256)
Q Consensus 179 -------------------------------~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 227 (256)
.........+|-|.+.+++|.+++.+..++..+..++.|. +++...++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~-~V~~~~f~ 217 (240)
T PF05705_consen 139 WPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW-DVRAEKFE 217 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC-eEEEecCC
Confidence 0012223468999999999999999999999999999998 79999999
Q ss_pred CCCCcCC----h-HHHHHHHHH
Q 025236 228 GVGHYTV----P-EEMDEVRNW 244 (256)
Q Consensus 228 g~~H~~~----~-~~~~~~~~~ 244 (256)
+..|.-+ + +..+.+.+|
T Consensus 218 ~S~HV~H~r~~p~~Y~~~v~~f 239 (240)
T PF05705_consen 218 DSPHVAHLRKHPDRYWRAVDEF 239 (240)
T ss_pred CCchhhhcccCHHHHHHHHHhh
Confidence 9988644 3 344666555
No 163
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.48 E-value=1.2e-07 Score=69.82 Aligned_cols=113 Identities=24% Similarity=0.240 Sum_probs=54.8
Q ss_pred EEEEEccCCC-CCCchHHHhhhcCCCCeE---EEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 35 TIVWLHGLSD-KGSSWSQLLETLPLPNIK---WICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 35 ~vl~~HG~~~-~~~~~~~~~~~l~~~g~~---vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
+|||+||.+. ....|..+.+.|.++||. ++++++-....... ..+ . ....+...+....+.+
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~-----~~~---~------~~~~~~~~~l~~fI~~ 68 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPS-----VQN---A------HMSCESAKQLRAFIDA 68 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTH-----HHH---H------HB-HHHHHHHHHHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCc-----ccc---c------ccchhhHHHHHHHHHH
Confidence 6999999998 567899999999999999 79988743211000 000 0 0011122222222222
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhhhc--cCCCCCCCccCcceEEEecc
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRILG--QYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~~~~~~~~~~~~v~~~~ 163 (256)
.+. .... +|-|+||||||.++-.+....... ......+.+..+...|.+.+
T Consensus 69 Vl~-~TGa-kVDIVgHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag 121 (219)
T PF01674_consen 69 VLA-YTGA-KVDIVGHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAG 121 (219)
T ss_dssp HHH-HHT---EEEEEETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES-
T ss_pred HHH-hhCC-EEEEEEcCCcCHHHHHHHHHcCCCCcccCccccccccccccccccc
Confidence 222 2234 999999999999998887643111 11112223445555666653
No 164
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.46 E-value=3.6e-07 Score=77.53 Aligned_cols=115 Identities=15% Similarity=0.067 Sum_probs=69.3
Q ss_pred CceEEEEEccCCCCCC----chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCC-CCCCcccHHHHHH
Q 025236 32 HQATIVWLHGLSDKGS----SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSED-GPDDLEGLDASAA 106 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~----~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 106 (256)
+.|++||+||++.... ....-...++..++.||.+++|.... +|......... ...-..|...+++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~---------Gfl~~~~~~~~~gN~Gl~Dq~~AL~ 194 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAF---------GFLSLGDLDAPSGNYGLLDQRLALK 194 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHH---------HH-BSSSTTSHBSTHHHHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccc---------ccccccccccCchhhhhhhhHHHHH
Confidence 5799999999764322 12223334456789999999986422 11111111111 2223557778888
Q ss_pred HHHHHHhcC-CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccC
Q 025236 107 HVANLLSTE-PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGW 164 (256)
Q Consensus 107 ~l~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~ 164 (256)
++.+.|..- .++++|.|+|+|.||..+...+... .....+..+|+.||.
T Consensus 195 WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---------~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 195 WVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP---------SSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG---------GGTTSBSEEEEES--
T ss_pred HHHhhhhhcccCCcceeeeeecccccccceeeecc---------ccccccccccccccc
Confidence 999988773 3457999999999999888877742 225678999999983
No 165
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.42 E-value=5.2e-06 Score=61.24 Aligned_cols=172 Identities=16% Similarity=0.087 Sum_probs=91.5
Q ss_pred EEccCC--CCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcC
Q 025236 38 WLHGLS--DKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTE 115 (256)
Q Consensus 38 ~~HG~~--~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 115 (256)
++|..+ ++...|..+...+. ..+.++.++.++++.+. .. ..++...+..+...+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~~-----------------~~---~~~~~~~~~~~~~~l~~~ 60 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPGE-----------------PL---PASADALVEAQAEAVLRA 60 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCCC-----------------CC---CCCHHHHHHHHHHHHHHh
Confidence 345543 45566888899887 46899999988653111 00 112333333333333333
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchh-------hhh----h------ccCC
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRT-------LKS----R------MEGS 178 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~----~------~~~~ 178 (256)
....++.++|||+||.++..++.+.... ...+.+++.+....+.... +.. . ....
T Consensus 61 ~~~~~~~l~g~s~Gg~~a~~~a~~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (212)
T smart00824 61 AGGRPFVLVGHSSGGLLAHAVAARLEAR--------GIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDA 132 (212)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHHHhC--------CCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccch
Confidence 3345899999999999999988865211 2345555554433221100 000 0 0000
Q ss_pred ------------hHHHhhcCCCCEEEeecCCCccc-cchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-hHHHHHHHH
Q 025236 179 ------------REATRRAASLPILLCHGSGDDVV-AYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-PEEMDEVRN 243 (256)
Q Consensus 179 ------------~~~~~~~~~~p~l~~~G~~D~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~ 243 (256)
..........|+.++.++.|... +......+.+... ...+.+.++| +|... .+....+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~----~~~~~~~~~g-~H~~~~~~~~~~~~~ 206 (212)
T smart00824 133 RLTAMGAYLRLFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRAHWP----LPHTVVDVPG-DHFTMMEEHAAATAR 206 (212)
T ss_pred hhhHHHHHHHHhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccCCCC----CCceeEEccC-chHHHHHHhHHHHHH
Confidence 00012235679999999988654 2222222222221 2688899997 88765 333334433
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.39 E-value=7.2e-07 Score=66.30 Aligned_cols=88 Identities=19% Similarity=0.283 Sum_probs=50.0
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCC--Ce---EEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHH-
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLP--NI---KWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDAS- 104 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~--g~---~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 104 (256)
++.-+||++||+.++..+|..+...+... .+ .++..-... ......++++..
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~----------------------n~~~T~~gI~~~g 59 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSN----------------------NEFKTFDGIDVCG 59 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccc----------------------cccccchhhHHHH
Confidence 34568999999999999888776666531 11 111110100 000112233333
Q ss_pred ---HHHHHHHHhcCCCC-ceeEEeEeCchhHHHHHHHHHh
Q 025236 105 ---AAHVANLLSTEPAD-IKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 105 ---~~~l~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
++.|.+.+...... .+|.++||||||.++-.+....
T Consensus 60 ~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 60 ERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred HHHHHHHHHhccccccccccceEEEecccHHHHHHHHHHh
Confidence 34444444333222 5899999999999987655543
No 167
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.32 E-value=1.9e-05 Score=61.34 Aligned_cols=119 Identities=11% Similarity=0.090 Sum_probs=71.4
Q ss_pred CCceEEEEEccCCCCCCc-hHHHhhhcCCCC--eEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCccc---HHHH
Q 025236 31 KHQATIVWLHGLSDKGSS-WSQLLETLPLPN--IKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEG---LDAS 104 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~-~~~~~~~l~~~g--~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 104 (256)
..+-+++|+||+..+-.+ -...++...+.| ...+.+..+.++..... ..+-++ -..+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Y-----------------n~DreS~~~Sr~a 176 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGY-----------------NYDRESTNYSRPA 176 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeec-----------------ccchhhhhhhHHH
Confidence 346699999998866543 223444444333 45666666654432111 112222 2334
Q ss_pred HHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch
Q 025236 105 AAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR 169 (256)
Q Consensus 105 ~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 169 (256)
++.+...|....+..+|.|++||||..++++.+.+..-.. ..+.+.+++-+|+.++-++.+-
T Consensus 177 Le~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~---~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 177 LERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRA---DRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred HHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccC---CcchhhhhhheEeeCCCCChhh
Confidence 4455555555555669999999999999999887652110 1114677888999888776543
No 168
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.30 E-value=0.00014 Score=56.33 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=62.5
Q ss_pred CCCCCceEEEEEccCCCCCCch-------HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCccc
Q 025236 28 PKGKHQATIVWLHGLSDKGSSW-------SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEG 100 (256)
Q Consensus 28 ~~~~~~~~vl~~HG~~~~~~~~-------~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (256)
+..++..-||++-|.+...+.. ..+.+.....+.+|+++++||-|.+. |. ...++
T Consensus 132 ~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~--G~----------------~s~~d 193 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST--GP----------------PSRKD 193 (365)
T ss_pred CCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC--CC----------------CCHHH
Confidence 4445566899999977665541 12333334568899999999765442 21 12456
Q ss_pred HHHHHHHHHHHHhcC---CCCceeEEeEeCchhHHHHHHHHH
Q 025236 101 LDASAAHVANLLSTE---PADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 101 ~~~~~~~l~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+..+.+.+.+.+.++ +...+|++.|||+||.++..++.+
T Consensus 194 Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 766677666666532 344699999999999999886654
No 169
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.19 E-value=7e-06 Score=69.50 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=57.3
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcC----------------CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCC
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLP----------------LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPD 96 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~----------------~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (256)
.-+|+|+.|..++..+-+.++.... ...+..+++|+...-. ...| ..-.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~t-Am~G-------------~~l~d 154 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFT-AMHG-------------HILLD 154 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhh-hhcc-------------HhHHH
Confidence 3589999998888776665544332 2235666666643110 0000 01112
Q ss_pred CcccHHHHHHHHHHHHhc--CCC---CceeEEeEeCchhHHHHHHHHH
Q 025236 97 DLEGLDASAAHVANLLST--EPA---DIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~--~~~---~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
..+.+.+++..+.++.+. +.+ +..|+|+||||||.+|..++..
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 345566777777777766 332 4579999999999999887764
No 170
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.17 E-value=5.5e-05 Score=54.68 Aligned_cols=90 Identities=20% Similarity=0.209 Sum_probs=55.6
Q ss_pred CCceEEEEEccCCCCCC---chHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGS---SWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
..+..|||+-|.|..-- ....+...+-+.+|.++.+..+.+. .|++.. .-.++.+++..
T Consensus 34 v~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~Gt~----------slk~D~edl~~---- 95 (299)
T KOG4840|consen 34 VESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGYGTF----------SLKDDVEDLKC---- 95 (299)
T ss_pred ceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----cccccc----------cccccHHHHHH----
Confidence 34567899998876533 2345778888899999999876432 222211 11223333333
Q ss_pred HHHHHhc-CCCCceeEEeEeCchhHHHHHHHHH
Q 025236 108 VANLLST-EPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 108 l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+.+++.. .+. ..|+|+|||-|+.-.+.+..+
T Consensus 96 l~~Hi~~~~fS-t~vVL~GhSTGcQdi~yYlTn 127 (299)
T KOG4840|consen 96 LLEHIQLCGFS-TDVVLVGHSTGCQDIMYYLTN 127 (299)
T ss_pred HHHHhhccCcc-cceEEEecCccchHHHHHHHh
Confidence 3333322 233 389999999999988887754
No 171
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.13 E-value=2.2e-05 Score=65.13 Aligned_cols=122 Identities=11% Similarity=-0.009 Sum_probs=75.6
Q ss_pred cccccceeecCCCCCceEEEEEccCCCCCC-----chHHHhh---hcCCCCeEEEeeCCCCCCCcccCCCccccccccCC
Q 025236 18 FEFGRTHVVRPKGKHQATIVWLHGLSDKGS-----SWSQLLE---TLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGD 89 (256)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~-----~~~~~~~---~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~ 89 (256)
+.+...++.+....+.|+++..+-+.-... ....... .++..||.||..|.||++.|.....
T Consensus 30 vrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~---------- 99 (563)
T COG2936 30 VRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFD---------- 99 (563)
T ss_pred eEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccc----------
Confidence 333334444444678899999982211111 1222334 6788999999999998865432111
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC
Q 025236 90 LSEDGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL 165 (256)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 165 (256)
....+..+|-.+.++++.+ ..-.+.+|+.+|.|++|...+.+|+.. |+.+++++..++..
T Consensus 100 --~~~~~E~~Dg~D~I~Wia~---QpWsNG~Vgm~G~SY~g~tq~~~Aa~~-----------pPaLkai~p~~~~~ 159 (563)
T COG2936 100 --PESSREAEDGYDTIEWLAK---QPWSNGNVGMLGLSYLGFTQLAAAALQ-----------PPALKAIAPTEGLV 159 (563)
T ss_pred --eeccccccchhHHHHHHHh---CCccCCeeeeecccHHHHHHHHHHhcC-----------Cchheeeccccccc
Confidence 1111123344444445433 334456999999999999999999965 77788887776643
No 172
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.09 E-value=0.00018 Score=53.34 Aligned_cols=195 Identities=18% Similarity=0.221 Sum_probs=98.9
Q ss_pred ceeecCCCCCceEEEEEccC--CCC-CCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcc
Q 025236 23 THVVRPKGKHQATIVWLHGL--SDK-GSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLE 99 (256)
Q Consensus 23 ~~~~~~~~~~~~~vl~~HG~--~~~-~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (256)
.++.-|. +++.+|=|+-|. |.. .-.|..+.+.|+++||.|++.-+.. ++ |. . .......+
T Consensus 8 ~wvl~P~-~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-------tf------DH--~-~~A~~~~~ 70 (250)
T PF07082_consen 8 SWVLIPP-RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-------TF------DH--Q-AIAREVWE 70 (250)
T ss_pred cEEEeCC-CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-------CC------cH--H-HHHHHHHH
Confidence 3444443 467677777773 222 2358889999999999999984421 10 00 0 00000011
Q ss_pred cHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEec--cC-----CCcchhhh
Q 025236 100 GLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLS--GW-----LPCSRTLK 172 (256)
Q Consensus 100 ~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~--~~-----~~~~~~~~ 172 (256)
.++...+.+.+.........+++=+|||+|+-+-+.+.... +..-++-++++ .+ +|..+.+.
T Consensus 71 ~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~-----------~~~r~gniliSFNN~~a~~aIP~~~~l~ 139 (250)
T PF07082_consen 71 RFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLF-----------DVERAGNILISFNNFPADEAIPLLEQLA 139 (250)
T ss_pred HHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhc-----------cCcccceEEEecCChHHHhhCchHhhhc
Confidence 12222222222111111123778899999999988877643 22233333332 21 12111111
Q ss_pred ----hhccCChHH-----HhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC--h------
Q 025236 173 ----SRMEGSREA-----TRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV--P------ 235 (256)
Q Consensus 173 ----~~~~~~~~~-----~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~------ 235 (256)
..+...+.+ .....-...|++.=++|.+ +++..+.+.|+.....-.+....+| .|-.. .
T Consensus 140 ~~l~~EF~PsP~ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~ 215 (250)
T PF07082_consen 140 PALRLEFTPSPEETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQV 215 (250)
T ss_pred cccccCccCCHHHHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCcc
Confidence 111111111 1122334567777777766 6777788888754322467888887 99643 1
Q ss_pred ----HHHHHHHHHHHHHh
Q 025236 236 ----EEMDEVRNWLTARL 249 (256)
Q Consensus 236 ----~~~~~~~~~l~~~l 249 (256)
.-++.+-+|+++.+
T Consensus 216 g~~ftP~da~~q~~k~~~ 233 (250)
T PF07082_consen 216 GSSFTPLDAVGQWLKQEV 233 (250)
T ss_pred CCccCchHHHHHHHHHHH
Confidence 01566677776654
No 173
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.03 E-value=1.3e-05 Score=65.53 Aligned_cols=79 Identities=16% Similarity=0.075 Sum_probs=47.2
Q ss_pred CCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcCCCCceeEE
Q 025236 44 DKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTEPADIKLGI 123 (256)
Q Consensus 44 ~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l 123 (256)
.....|..+.+.|.+.||.+ ..|+++.|.. | +. . ....+.+....+.+.+... .....++.|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYD---------w---R~-~---~~~~~~~~~Lk~lIe~~~~-~~g~~kV~L 166 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYD---------F---RQ-S---NRLPETMDGLKKKLETVYK-ASGGKKVNI 166 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCC---------c---cc-c---ccHHHHHHHHHHHHHHHHH-HcCCCCEEE
Confidence 34467888999999889855 6788775431 1 10 0 0001112222222222222 233459999
Q ss_pred eEeCchhHHHHHHHHHh
Q 025236 124 GGFSMGAAIALYSATCR 140 (256)
Q Consensus 124 ~G~S~Gg~~a~~~a~~~ 140 (256)
+||||||.++..++...
T Consensus 167 VGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 167 ISHSMGGLLVKCFMSLH 183 (440)
T ss_pred EEECHhHHHHHHHHHHC
Confidence 99999999999988764
No 174
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.99 E-value=0.00016 Score=52.87 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=26.5
Q ss_pred EeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 192 LCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 192 ~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
.+-|++|.++|++..+.+.+.. +.+.+++ ++|+.+
T Consensus 170 aiIg~~D~IFpp~nQ~~~W~~~-------~~~~~~~-~~Hy~F 204 (213)
T PF04301_consen 170 AIIGKKDRIFPPENQKRAWQGR-------CTIVEID-APHYPF 204 (213)
T ss_pred EEEcCCCEEeCHHHHHHHHhCc-------CcEEEec-CCCcCc
Confidence 7789999999999887777632 3455666 699855
No 175
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.96 E-value=0.00046 Score=56.75 Aligned_cols=65 Identities=23% Similarity=0.381 Sum_probs=43.6
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhc-----------------CC----cceEEEEeCCCCCcCChHHHHHHHHH
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSV-----------------GF----RDLTFRCYNGVGHYTVPEEMDEVRNW 244 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~-----------------~~----~~~~~~~~~g~~H~~~~~~~~~~~~~ 244 (256)
...++|+.+|..|.++|.-..+.+.+.+.=. |. .+..++.+.|+||+...+.-+...+.
T Consensus 329 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 329 NGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp TT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred ccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 3489999999999999999999988887410 00 24678999999999876665555555
Q ss_pred HHHHhh
Q 025236 245 LTARLE 250 (256)
Q Consensus 245 l~~~l~ 250 (256)
|++.++
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 555543
No 176
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.95 E-value=4.6e-05 Score=60.53 Aligned_cols=101 Identities=19% Similarity=0.114 Sum_probs=66.1
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCCCeE---EEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLPNIK---WICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~---vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
.-.++++||++.+...|..+...+...|+. ++.+++++.. . .........+....+.
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~---------------~~~~~~~~~ql~~~V~ 118 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-----G---------------TYSLAVRGEQLFAYVD 118 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-----C---------------CccccccHHHHHHHHH
Confidence 448999999988889999988888877877 7777665320 0 0011222344444454
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
+.+.... ..++.|+||||||.++..++... .....++.++.+++
T Consensus 119 ~~l~~~g-a~~v~LigHS~GG~~~ry~~~~~---------~~~~~V~~~~tl~t 162 (336)
T COG1075 119 EVLAKTG-AKKVNLIGHSMGGLDSRYYLGVL---------GGANRVASVVTLGT 162 (336)
T ss_pred HHHhhcC-CCceEEEeecccchhhHHHHhhc---------CccceEEEEEEecc
Confidence 4444332 24999999999999999777754 12256666666654
No 177
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.91 E-value=0.00012 Score=51.32 Aligned_cols=75 Identities=15% Similarity=0.012 Sum_probs=48.7
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeec
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHG 195 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G 195 (256)
.+..++.++|||+||.+|..++...... .......++.+.+.......+.. ..........+..++.
T Consensus 25 ~p~~~i~v~GHSlGg~lA~l~a~~~~~~-------~~~~~~~~~~fg~p~~~~~~~~~------~~~~~~~~~~~~~i~~ 91 (153)
T cd00741 25 YPDYKIHVTGHSLGGALAGLAGLDLRGR-------GLGRLVRVYTFGPPRVGNAAFAE------DRLDPSDALFVDRIVN 91 (153)
T ss_pred CCCCeEEEEEcCHHHHHHHHHHHHHHhc-------cCCCceEEEEeCCCcccchHHHH------HhhhccCCccEEEEEE
Confidence 3556999999999999999999875211 02345667777766554443322 0012233567888888
Q ss_pred CCCccccc
Q 025236 196 SGDDVVAY 203 (256)
Q Consensus 196 ~~D~~~~~ 203 (256)
..|.+...
T Consensus 92 ~~D~v~~~ 99 (153)
T cd00741 92 DNDIVPRL 99 (153)
T ss_pred CCCccCCC
Confidence 89877654
No 178
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.89 E-value=0.00038 Score=55.01 Aligned_cols=171 Identities=12% Similarity=0.096 Sum_probs=95.9
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
-.-||+.|=|+-.+-=+.....|++.|+.|+.+|.-. +.|-. .+.+.+..++..+.+.+.
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLR-----------YfW~~---------rtPe~~a~Dl~r~i~~y~ 320 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLR-----------YFWSE---------RTPEQIAADLSRLIRFYA 320 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhh-----------hhhcc---------CCHHHHHHHHHHHHHHHH
Confidence 3455666655444444568899999999999998531 13421 245667777888888777
Q ss_pred cCCCCceeEEeEeCchhHHHHHHHHHhhhccC-----CCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCC
Q 025236 114 TEPADIKLGIGGFSMGAAIALYSATCRILGQY-----GNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASL 188 (256)
Q Consensus 114 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (256)
..-...++.|+|+|+|+=+--....+.+.... ..-+........-+.+.+|+.....-. ........+....
T Consensus 321 ~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~---~~~~~~~~~l~~~ 397 (456)
T COG3946 321 RRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGA---GDVVPDIAKLPLA 397 (456)
T ss_pred HhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCC---CCcchhhhhCCcc
Confidence 76666799999999999765444443321100 000001122233455666665443211 0011112233344
Q ss_pred CEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHH
Q 025236 189 PILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM 238 (256)
Q Consensus 189 p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~ 238 (256)
.+.-|+|.+|.-... -.++. ...+.+.+|| ||-|..++.
T Consensus 398 ~v~CiYG~~e~d~~C-------p~l~~---~~~~~v~lpG-gHHFd~dy~ 436 (456)
T COG3946 398 RVQCIYGQEEKDTAC-------PSLKA---KGVDTVKLPG-GHHFDGDYE 436 (456)
T ss_pred eeEEEecCccccccC-------Ccchh---hcceeEecCC-CcccCccHH
Confidence 677788876543211 12222 2578899998 776665543
No 179
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.86 E-value=4.7e-05 Score=49.36 Aligned_cols=55 Identities=25% Similarity=0.355 Sum_probs=45.8
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC---hHH-HHHHHHHHH
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV---PEE-MDEVRNWLT 246 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~-~~~~~~~l~ 246 (256)
..|+|++.++.|+++|++.++.+.+.+. +.+++.++|.||... ... .+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 5899999999999999999999999994 589999999999865 233 355556665
No 180
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.84 E-value=6.2e-05 Score=64.18 Aligned_cols=97 Identities=18% Similarity=0.143 Sum_probs=63.4
Q ss_pred ceEEEEEccCCCCCCc---h--HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 33 QATIVWLHGLSDKGSS---W--SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~---~--~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
.|+++++||++-.... + ......+......|+.+.+|....+ ++...........-..|...++++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lG---------F~st~d~~~~gN~gl~Dq~~AL~w 182 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLG---------FLSTGDSAAPGNLGLFDQLLALRW 182 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceece---------eeecCCCCCCCcccHHHHHHHHHH
Confidence 7999999997643222 2 2233334456789999998864322 111111111233335577788888
Q ss_pred HHHHHhcC-CCCceeEEeEeCchhHHHHHHHH
Q 025236 108 VANLLSTE-PADIKLGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 108 l~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~ 138 (256)
+.+.|..- .+.++|.|+|||.||..+..+..
T Consensus 183 v~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 183 VKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 98888763 35579999999999999887766
No 181
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.72 E-value=0.00012 Score=50.76 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=70.7
Q ss_pred ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccC---------------ChHHHh
Q 025236 119 IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEG---------------SREATR 183 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------------~~~~~~ 183 (256)
.+..+-|-||||+.|..+..++ |..+.++|++||-+.....+-..++. ++....
T Consensus 101 gs~~~sgcsmGayhA~nfvfrh-----------P~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~dp~~l~ 169 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRH-----------PHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLADPFRLE 169 (227)
T ss_pred CCccccccchhhhhhhhhheeC-----------hhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcChHHHH
Confidence 3677899999999999999876 88999999999976543322222111 122234
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
....+.+.++.|.+|+..+ ....+.+.+.++.+ +..+.+..|..|.
T Consensus 170 rlr~~~~vfc~G~e~~~L~--~~~~L~~~l~dKqi-paw~~~WggvaHd 215 (227)
T COG4947 170 RLRRIDMVFCIGDEDPFLD--NNQHLSRLLSDKQI-PAWMHVWGGVAHD 215 (227)
T ss_pred HHhhccEEEEecCcccccc--chHHHHHHhccccc-cHHHHHhcccccc
Confidence 4556789999999999884 44678888877666 5566666666664
No 182
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.63 E-value=0.00062 Score=56.57 Aligned_cols=64 Identities=13% Similarity=0.175 Sum_probs=47.2
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhh-----------------c----CC----c-----ceEEEEeCCCCCcCChH
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNS-----------------V----GF----R-----DLTFRCYNGVGHYTVPE 236 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~-----------------~----~~----~-----~~~~~~~~g~~H~~~~~ 236 (256)
.+++|+.+|+.|.++++...+++.+.|+= . |. . +..++.+.++||+...+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 58999999999999999888888877750 0 11 2 46778888999998866
Q ss_pred HHHHHHHHHHHHhh
Q 025236 237 EMDEVRNWLTARLE 250 (256)
Q Consensus 237 ~~~~~~~~l~~~l~ 250 (256)
..+.+.+.+.+.+.
T Consensus 444 ~P~~~~~~i~~fl~ 457 (462)
T PTZ00472 444 QPAVALTMINRFLR 457 (462)
T ss_pred HHHHHHHHHHHHHc
Confidence 65555555555554
No 183
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.52 E-value=0.00053 Score=53.11 Aligned_cols=143 Identities=15% Similarity=0.147 Sum_probs=83.3
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
.+-.||++-|..+-.+ ......-++.||.|+..+++|.+.+. |. +-...+...++..++...+.
T Consensus 242 gq~LvIC~EGNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagST--G~------------P~p~n~~nA~DaVvQfAI~~ 305 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGST--GL------------PYPVNTLNAADAVVQFAIQV 305 (517)
T ss_pred CceEEEEecCCccceE--eeeecChHHhCceeeccCCCCccccC--CC------------CCcccchHHHHHHHHHHHHH
Confidence 3568899888544322 11222233579999999998643211 10 00111222333334444443
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcc--------h--------hhhhhc
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCS--------R--------TLKSRM 175 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~--------~~~~~~ 175 (256)
+. +..+.|+|+|+|.||..+..+|.. || .++++|+-+.|-+.. . .+..-.
T Consensus 306 Lg--f~~edIilygWSIGGF~~~waAs~-----------YP-dVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh~ 371 (517)
T KOG1553|consen 306 LG--FRQEDIILYGWSIGGFPVAWAASN-----------YP-DVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNHM 371 (517)
T ss_pred cC--CCccceEEEEeecCCchHHHHhhc-----------CC-CceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHhc
Confidence 32 445689999999999999999884 34 588888776653211 1 111111
Q ss_pred cCChHHHhhcCCCCEEEeecCCCccccch
Q 025236 176 EGSREATRRAASLPILLCHGSGDDVVAYK 204 (256)
Q Consensus 176 ~~~~~~~~~~~~~p~l~~~G~~D~~~~~~ 204 (256)
+-.........+-|+.++.-++|+++...
T Consensus 372 NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 372 NLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred ccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 11223345566889999999999887654
No 184
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.42 E-value=0.007 Score=50.42 Aligned_cols=62 Identities=18% Similarity=0.181 Sum_probs=48.7
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC------hHH---HHHHHHHHHHHhhh
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV------PEE---MDEVRNWLTARLEL 251 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------~~~---~~~~~~~l~~~l~~ 251 (256)
-+|+.|+...-|+.. +.+..++++|+..|. .+.+.++++.-|.|. +|. -+.-++-|+..+..
T Consensus 787 LPp~~i~ac~mDP~L--DD~vmfA~kLr~lG~-~v~l~vle~lPHGFLnft~ls~E~~~~~~~CI~rl~~~L~~ 857 (880)
T KOG4388|consen 787 LPPVHIVACAMDPML--DDSVMFARKLRNLGQ-PVTLRVLEDLPHGFLNFTALSRETRQAAELCIERLRLVLTP 857 (880)
T ss_pred CCCceEEEeccCcch--hHHHHHHHHHHhcCC-ceeehhhhcCCccceeHHhhCHHHHHHHHHHHHHHHHHhCC
Confidence 478999999999988 788899999999996 999999999999876 332 34455666665543
No 185
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.35 E-value=0.0014 Score=51.37 Aligned_cols=90 Identities=19% Similarity=0.147 Sum_probs=59.7
Q ss_pred ceEEEEEccCCCCCCchHHHhhhcCCC---------CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHH
Q 025236 33 QATIVWLHGLSDKGSSWSQLLETLPLP---------NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDA 103 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~~~~~~l~~~---------g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (256)
.-+++++|||.++-..|-.+...|-+. -|.||+|..+|-|-+.... ..--...+
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s-----------------k~GFn~~a 214 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS-----------------KTGFNAAA 214 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc-----------------cCCccHHH
Confidence 347899999999988888888877543 3899999998754332111 00111233
Q ss_pred HHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 104 SAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 104 ~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+.-+.+++-. ..-++.+|-|--+|..++..+|...
T Consensus 215 ~ArvmrkLMlR-Lg~nkffiqGgDwGSiI~snlasLy 250 (469)
T KOG2565|consen 215 TARVMRKLMLR-LGYNKFFIQGGDWGSIIGSNLASLY 250 (469)
T ss_pred HHHHHHHHHHH-hCcceeEeecCchHHHHHHHHHhhc
Confidence 33344444322 2234899999999999999999865
No 186
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.33 E-value=0.021 Score=45.20 Aligned_cols=64 Identities=13% Similarity=0.121 Sum_probs=53.2
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc-----CChHHHHHHHHHHHHHhhh
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY-----TVPEEMDEVRNWLTARLEL 251 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~-----~~~~~~~~~~~~l~~~l~~ 251 (256)
..+.+.+.+..|.++|.+..+++.+..++.|. +++-+-+.++.|. +.....+...+|++.....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~-~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGV-NVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCc-eEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 56888898999999999999999999999888 7888888877775 3356678899999887654
No 187
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.33 E-value=0.028 Score=46.12 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=57.6
Q ss_pred ceeecCCCCCceEEEEEccCCCCCCchHH--HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCccc
Q 025236 23 THVVRPKGKHQATIVWLHGLSDKGSSWSQ--LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEG 100 (256)
Q Consensus 23 ~~~~~~~~~~~~~vl~~HG~~~~~~~~~~--~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (256)
.++..|++-+.|+.|++-|+-. .+.|+. +.+.|.. -| .+.-|.|..|-.-.-| .+.
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~-Pf-LL~~DpRleGGaFYlG-------------------s~e 336 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA-PF-LLIGDPRLEGGAFYLG-------------------SDE 336 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCC-Ce-EEeeccccccceeeeC-------------------cHH
Confidence 4667788778899999999876 555554 4555542 22 2333555433111111 122
Q ss_pred HHHHHH-HHHHHHhc-CCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 101 LDASAA-HVANLLST-EPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 101 ~~~~~~-~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+++.+. .|.+.+.. .++.+.++|.|-|||.+-|+.+++..
T Consensus 337 yE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 337 YEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 333222 22333333 35667899999999999999999854
No 188
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.25 E-value=0.00086 Score=46.12 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 103 ASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
...+.+.++..+.. ..++.+.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~-~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYP-DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHST-TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc-CccchhhccchHHHHHHHHHHhh
Confidence 34445555444433 46999999999999999999875
No 189
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.17 E-value=0.0057 Score=44.28 Aligned_cols=97 Identities=11% Similarity=0.098 Sum_probs=53.5
Q ss_pred CCceEEEEEccCCCC-CCchHH---------------HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCC
Q 025236 31 KHQATIVWLHGLSDK-GSSWSQ---------------LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDG 94 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~-~~~~~~---------------~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (256)
.+..+++++||.|.- +.+|.. +.++....||.|++.+.... +.++.-....
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~----------~kfye~k~np--- 165 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRE----------RKFYEKKRNP--- 165 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchh----------hhhhhcccCc---
Confidence 345589999997753 334442 33344468898888865310 1111110000
Q ss_pred CCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 95 PDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.....+-.+.+..+-..+........++++.||.||..++.+..+.
T Consensus 166 ~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f 211 (297)
T KOG3967|consen 166 QKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERF 211 (297)
T ss_pred chhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhc
Confidence 0011122222333333333333345899999999999999999876
No 190
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.13 E-value=0.0055 Score=48.90 Aligned_cols=114 Identities=14% Similarity=0.050 Sum_probs=62.3
Q ss_pred eEEEEEccCCCCCCchHH---HhhhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 34 ATIVWLHGLSDKGSSWSQ---LLETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~---~~~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
..|+|.-|.-++-+.|.. +...++ +.+-.+|.+++|.-|.+..-|... . .....-.....++.-++...+.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s--~---k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQS--Y---KDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchh--c---cChhhhccccHHHHHHHHHHHH
Confidence 578888885555443332 222222 345688889988877666444321 1 1111111112222222222333
Q ss_pred HHHhcCC--CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 110 NLLSTEP--ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 110 ~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
..++... ...+|+++|-|+||+++..+=+ +||..+.|+++-|.
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRl-----------KYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRL-----------KYPHIVLGALAASA 200 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHh-----------cChhhhhhhhhccC
Confidence 3333331 2358999999999999888755 67888877765444
No 191
>PLN02606 palmitoyl-protein thioesterase
Probab=97.09 E-value=0.0051 Score=47.45 Aligned_cols=87 Identities=15% Similarity=0.095 Sum_probs=46.1
Q ss_pred eEEEEEccCC--CCCCchHHHhhhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 34 ATIVWLHGLS--DKGSSWSQLLETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 34 ~~vl~~HG~~--~~~~~~~~~~~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
.+||+.||.| .....+..+.+.+. ..+.-+.++.. +. +. ...|+. ...++++...+.+..
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~------~~-~~s~~~---------~~~~Qv~~vce~l~~ 89 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GN------GV-QDSLFM---------PLRQQASIACEKIKQ 89 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CC------Cc-cccccc---------CHHHHHHHHHHHHhc
Confidence 4688899999 44456666666664 22443333321 10 10 011110 012333443444433
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
..+ .. +-+.++|+|+||.++=.++.+.
T Consensus 90 -~~~-L~-~G~naIGfSQGglflRa~ierc 116 (306)
T PLN02606 90 -MKE-LS-EGYNIVAESQGNLVARGLIEFC 116 (306)
T ss_pred -chh-hc-CceEEEEEcchhHHHHHHHHHC
Confidence 111 12 3689999999999988888875
No 192
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.04 E-value=0.0038 Score=51.76 Aligned_cols=116 Identities=13% Similarity=-0.023 Sum_probs=59.7
Q ss_pred CceEEEEEccCCCCCCchH--HHhhhcC-CCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWS--QLLETLP-LPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHV 108 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~--~~~~~l~-~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (256)
..|++|++-|-+.-...+. .+...++ +.|-.+++.++|.-|.+..-+.... ..-.....++.-+++..+
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~--------~nL~yLt~~QALaD~a~F 99 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLST--------ENLRYLTSEQALADLAYF 99 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGG--------STTTC-SHHHHHHHHHHH
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccch--------hhHHhcCHHHHHHHHHHH
Confidence 3778888766443221111 1223333 4577999999998776653221111 111112233333334444
Q ss_pred HHHHhcC---CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 109 ANLLSTE---PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 109 ~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
.+.++.. .+..+++++|-|+||.+|..+-.+ ||..+.|.++-|+.+.
T Consensus 100 ~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~k-----------yP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 100 IRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLK-----------YPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH------------TTT-SEEEEET--CC
T ss_pred HHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhh-----------CCCeeEEEEeccceee
Confidence 4444432 234599999999999999998875 5999999998887653
No 193
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.97 E-value=0.003 Score=51.44 Aligned_cols=43 Identities=14% Similarity=0.065 Sum_probs=30.4
Q ss_pred CceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC
Q 025236 118 DIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL 165 (256)
Q Consensus 118 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 165 (256)
..++.|+||||||.++..++....... .....++.+|.+++.+
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~-----W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEE-----WKDKYIKRFISIGTPF 160 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchh-----hHHhhhhEEEEeCCCC
Confidence 569999999999999999887641100 0134578888887643
No 194
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.90 E-value=0.0027 Score=47.33 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=38.1
Q ss_pred ccHHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 99 EGLDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
.....+++.+.+.+... +. ++.+.|||.||.+|..+++... .....++..++.+.+
T Consensus 66 ~~q~~A~~yl~~~~~~~-~~-~i~v~GHSkGGnLA~yaa~~~~-------~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 66 PQQKSALAYLKKIAKKY-PG-KIYVTGHSKGGNLAQYAAANCD-------DEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHHHHhC-CC-CEEEEEechhhHHHHHHHHHcc-------HHHhhheeEEEEeeC
Confidence 33456666766666543 33 6999999999999999998631 122456777776654
No 195
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.75 E-value=0.016 Score=43.55 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=50.2
Q ss_pred eEEEEEccCCCCCCc--hHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 34 ATIVWLHGLSDKGSS--WSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~--~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
-++|++||.+.+..+ +..+.+.+.+ .|..+++.|.-. | ....| ..-+.+.++.+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~-------g-~~~s~-------------l~pl~~Qv~~~ce 82 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGD-------G-IKDSS-------------LMPLWEQVDVACE 82 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecC-------C-cchhh-------------hccHHHHHHHHHH
Confidence 368889999987665 5666655542 577788876521 1 00111 1113333333333
Q ss_pred HHhcCC-CCceeEEeEeCchhHHHHHHHHHh
Q 025236 111 LLSTEP-ADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 111 ~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+.... -..-+.++|.|+||.++-.++...
T Consensus 83 ~v~~m~~lsqGynivg~SQGglv~Raliq~c 113 (296)
T KOG2541|consen 83 KVKQMPELSQGYNIVGYSQGGLVARALIQFC 113 (296)
T ss_pred HHhcchhccCceEEEEEccccHHHHHHHHhC
Confidence 333211 123788999999999988888764
No 196
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.72 E-value=0.0042 Score=45.28 Aligned_cols=40 Identities=15% Similarity=0.051 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 101 LDASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 101 ~~~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
..+..+.+...+.....+.+++|+|||+|+.+..+++.+.
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3444455556666666667999999999999999998864
No 197
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.64 E-value=0.043 Score=42.60 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=25.3
Q ss_pred eeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 120 KLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
-+.++|||+||.++=.++.+.+. .+.++-+|.+++
T Consensus 95 G~naIGfSQGGlflRa~ierc~~---------~p~V~nlISlgg 129 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDG---------GPPVYNYISLAG 129 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCC---------CCCcceEEEecC
Confidence 68999999999999888886521 134666666543
No 198
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.017 Score=43.36 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=40.1
Q ss_pred EEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC----hHHH-HHHHHHHHHH
Q 025236 190 ILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV----PEEM-DEVRNWLTAR 248 (256)
Q Consensus 190 ~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~-~~~~~~l~~~ 248 (256)
++++.+++|.++|......+.+.+ |++++..++| ||... .+.+ .+|.+-+++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~W-----Pg~eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIW-----PGCEVRYLEG-GHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhC-----CCCEEEEeec-CceeeeehhchHHHHHHHHHHHhh
Confidence 678889999999998889999998 6788888885 99522 3333 5566665543
No 199
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.57 E-value=0.0039 Score=46.89 Aligned_cols=25 Identities=32% Similarity=0.300 Sum_probs=21.6
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+..++.+.|||+||.+|..++...
T Consensus 125 ~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 125 YPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCCceEEEEccCHHHHHHHHHHHHH
Confidence 4556999999999999999998865
No 200
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.57 E-value=0.013 Score=44.77 Aligned_cols=102 Identities=19% Similarity=0.257 Sum_probs=48.4
Q ss_pred eEEEEEccCCCCC---CchHH---HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHH
Q 025236 34 ATIVWLHGLSDKG---SSWSQ---LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAH 107 (256)
Q Consensus 34 ~~vl~~HG~~~~~---~~~~~---~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (256)
.+||+.||.|.+. ..+.. +++... +|.-|.+++....... . ....+ +-.+.+.++.
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~-PG~yV~si~ig~~~~~---D-~~~s~-------------f~~v~~Qv~~ 67 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQH-PGTYVHSIEIGNDPSE---D-VENSF-------------FGNVNDQVEQ 67 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHS-TT--EEE--SSSSHHH---H-HHHHH-------------HSHHHHHHHH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhC-CCceEEEEEECCCcch---h-hhhhH-------------HHHHHHHHHH
Confidence 3688889999753 23444 333333 6777777755321000 0 00000 1234444555
Q ss_pred HHHHHhcCCC-CceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 108 VANLLSTEPA-DIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 108 l~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
+.+.+..... .+-+.++|+|+||.+.=.++.+.+ ...++-+|.+++
T Consensus 68 vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~----------~~~V~nlISlgg 114 (279)
T PF02089_consen 68 VCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCN----------DPPVHNLISLGG 114 (279)
T ss_dssp HHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-T----------SS-EEEEEEES-
T ss_pred HHHHHhhChhhhcceeeeeeccccHHHHHHHHHCC----------CCCceeEEEecC
Confidence 5555543221 137999999999999888888651 245777777755
No 201
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.53 E-value=0.0067 Score=47.67 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=44.1
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHH
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM 238 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~ 238 (256)
.+...|-+|+.++.|..++++.+.-.++.|.. ..-+..+|+..|...+..+
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG----~kaLrmvPN~~H~~~n~~i 376 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG----EKALRMVPNDPHNLINQFI 376 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC----ceeeeeCCCCcchhhHHHH
Confidence 45678999999999999999999999999975 6788899999998776554
No 202
>PLN02310 triacylglycerol lipase
Probab=96.33 E-value=0.0065 Score=48.96 Aligned_cols=23 Identities=35% Similarity=0.563 Sum_probs=20.0
Q ss_pred CceeEEeEeCchhHHHHHHHHHh
Q 025236 118 DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 118 ~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
..+|.+.|||+||.+|+.+|...
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHH
Confidence 35899999999999999988754
No 203
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.16 E-value=0.014 Score=48.85 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=51.2
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcC------C-cceEEEEeCCCCCcCC------hHHHHHHHHHHHHHh
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVG------F-RDLTFRCYNGVGHYTV------PEEMDEVRNWLTARL 249 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~------~-~~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l 249 (256)
..-++|+.||..|+++|+..+..+++++.+.- + .-.++..+||++|... .+.+..+++|+++-.
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 35789999999999999999999988887532 1 1379999999999743 467899999998543
No 204
>PLN02571 triacylglycerol lipase
Probab=96.14 E-value=0.0092 Score=48.25 Aligned_cols=38 Identities=29% Similarity=0.347 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCC-CceeEEeEeCchhHHHHHHHHHh
Q 025236 103 ASAAHVANLLSTEPA-DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 103 ~~~~~l~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+.+..+..++....+ ..+|++.|||+||.+|+..|...
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 444555555543222 23799999999999999999865
No 205
>PLN02408 phospholipase A1
Probab=96.12 E-value=0.01 Score=47.23 Aligned_cols=37 Identities=32% Similarity=0.370 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCCC-CceeEEeEeCchhHHHHHHHHHh
Q 025236 104 SAAHVANLLSTEPA-DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 104 ~~~~l~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
..+.+.+++....+ ..+|.+.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 34455555544332 23699999999999999998865
No 206
>PLN02454 triacylglycerol lipase
Probab=96.07 E-value=0.013 Score=47.42 Aligned_cols=21 Identities=29% Similarity=0.358 Sum_probs=19.0
Q ss_pred eeEEeEeCchhHHHHHHHHHh
Q 025236 120 KLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+|++.|||+||.+|+.+|...
T Consensus 229 sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHH
Confidence 599999999999999999764
No 207
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.07 E-value=0.012 Score=49.54 Aligned_cols=22 Identities=23% Similarity=0.066 Sum_probs=19.2
Q ss_pred CceeEEeEeCchhHHHHHHHHH
Q 025236 118 DIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 118 ~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+.+++|+||||||.+++.++..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 4599999999999999988763
No 208
>PLN00413 triacylglycerol lipase
Probab=96.07 E-value=0.012 Score=48.15 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHH
Q 025236 103 ASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+..+.+.+.+.. .+..++.+.|||+||.+|..++..
T Consensus 269 ~i~~~Lk~ll~~-~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQ-NPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHH-CCCCeEEEEecCHHHHHHHHHHHH
Confidence 344455555544 445589999999999999998864
No 209
>PLN02162 triacylglycerol lipase
Probab=96.06 E-value=0.013 Score=47.97 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHH
Q 025236 103 ASAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 103 ~~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+..+.+.+.+.+ .+..++++.|||+||.+|..++..
T Consensus 263 ~I~~~L~~lL~k-~p~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 263 TIRQMLRDKLAR-NKNLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred HHHHHHHHHHHh-CCCceEEEEecChHHHHHHHHHHH
Confidence 333445555544 344589999999999999998764
No 210
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.04 E-value=0.01 Score=49.10 Aligned_cols=23 Identities=39% Similarity=0.576 Sum_probs=19.9
Q ss_pred CceeEEeEeCchhHHHHHHHHHh
Q 025236 118 DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 118 ~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
..+|.+.|||+||.+|+..|...
T Consensus 317 ~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 317 EVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred cceEEEeccCHHHHHHHHHHHHH
Confidence 34899999999999999988754
No 211
>PLN02934 triacylglycerol lipase
Probab=95.92 E-value=0.015 Score=48.11 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHH
Q 025236 104 SAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 104 ~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
....+.+++.+ .+..++++.|||+||.+|..++..
T Consensus 307 v~~~lk~ll~~-~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 307 VRSKLKSLLKE-HKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHH-CCCCeEEEeccccHHHHHHHHHHH
Confidence 44455555544 445599999999999999999864
No 212
>PLN02324 triacylglycerol lipase
Probab=95.90 E-value=0.014 Score=47.12 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCC-CceeEEeEeCchhHHHHHHHHHh
Q 025236 104 SAAHVANLLSTEPA-DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 104 ~~~~l~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
....|.+++..... ..+|.+.|||+||.+|+..|...
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 34445555544322 23799999999999999998754
No 213
>PLN02753 triacylglycerol lipase
Probab=95.67 E-value=0.15 Score=42.57 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhcCC----CCceeEEeEeCchhHHHHHHHHHh
Q 025236 103 ASAAHVANLLSTEP----ADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 103 ~~~~~l~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+.+..+..++.... +.-+|.+.|||+||.+|+.+|...
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 33444555544321 235999999999999999998754
No 214
>PLN02802 triacylglycerol lipase
Probab=95.62 E-value=0.021 Score=47.21 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCC-CceeEEeEeCchhHHHHHHHHHh
Q 025236 104 SAAHVANLLSTEPA-DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 104 ~~~~l~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.++.+.+++....+ ..+|.+.|||+||.+|+.+|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34445555443322 23799999999999999988864
No 215
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.56 E-value=0.042 Score=39.58 Aligned_cols=72 Identities=15% Similarity=0.046 Sum_probs=42.3
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeec
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHG 195 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G 195 (256)
.++.+++|+|+|+|+.++..++...+ .......++.+++++.........- . ......-.++-++-
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~-----l~~~~~~~I~avvlfGdP~~~~~~~--~-------~~~~~~~~~~~~C~ 143 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDG-----LPPDVADRIAAVVLFGDPRRGAGQP--G-------IPGDYSDRVRSYCN 143 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTT-----SSHHHHHHEEEEEEES-TTTBTTTT--T-------BTCSCGGGEEEE-B
T ss_pred CCCCCEEEEecccccHHHHHHHHhcc-----CChhhhhhEEEEEEecCCcccCCcc--c-------cCcccccceeEEcC
Confidence 45669999999999999999987610 0001246778888876543221110 0 01112235888888
Q ss_pred CCCccc
Q 025236 196 SGDDVV 201 (256)
Q Consensus 196 ~~D~~~ 201 (256)
..|.++
T Consensus 144 ~gD~vC 149 (179)
T PF01083_consen 144 PGDPVC 149 (179)
T ss_dssp TT-GGG
T ss_pred CCCccc
Confidence 889888
No 216
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.56 E-value=0.027 Score=40.39 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=48.0
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc--CC-----hHHHHHHHHHHHH
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY--TV-----PEEMDEVRNWLTA 247 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~--~~-----~~~~~~~~~~l~~ 247 (256)
...++++|-+-|+.|.+....++....+.+..........++.+|+||+ |. .+....+.+||.+
T Consensus 131 aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 131 AIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 3457789999999999999988887777765443335677888999997 22 4556777888765
No 217
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.43 E-value=0.27 Score=45.29 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=61.6
Q ss_pred CCceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
...|+++|+|-.-+....++.++..+.-+-|..-+- ..-..++++..+....+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle~PaYglQ~T---------------------------~~vP~dSies~A~~yir 2173 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLEIPAYGLQCT---------------------------EAVPLDSIESLAAYYIR 2173 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcCCcchhhhcc---------------------------ccCCcchHHHHHHHHHH
Confidence 456899999998888888888888886433311111 11224567777777777
Q ss_pred HHhcCCCCceeEEeEeCchhHHHHHHHHHhh
Q 025236 111 LLSTEPADIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 111 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
.+++..+..+.-++|.|+|+.++..+|....
T Consensus 2174 qirkvQP~GPYrl~GYSyG~~l~f~ma~~Lq 2204 (2376)
T KOG1202|consen 2174 QIRKVQPEGPYRLAGYSYGACLAFEMASQLQ 2204 (2376)
T ss_pred HHHhcCCCCCeeeeccchhHHHHHHHHHHHH
Confidence 7777777779999999999999999998763
No 218
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.41 E-value=0.19 Score=41.56 Aligned_cols=176 Identities=16% Similarity=0.126 Sum_probs=86.1
Q ss_pred CCceEEEEEccCCCCCCchHHHhhh----cC--------------CCCeEEEeeCCC-CCCCcccCCCccccccccCCCC
Q 025236 31 KHQATIVWLHGLSDKGSSWSQLLET----LP--------------LPNIKWICPTAP-TRPVAIFGGYPCTAWFDVGDLS 91 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~~~~~~----l~--------------~~g~~vi~~d~~-~~~~~~~~~~~~~~~~~~~~~~ 91 (256)
.++|+|+++-|+.+.+..+-.+.+. +. ...-.++.+|.| |-|.+... .
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~-------------~ 165 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRAL-------------G 165 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccc-------------c
Confidence 3689999999998876655543211 00 011255666633 22332221 1
Q ss_pred CCCCCCcccHHHHH----HHHHHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 92 EDGPDDLEGLDASA----AHVANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 92 ~~~~~~~~~~~~~~----~~l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
.+...+...+.+++ +.+.+.+.+.. ...+.+|+|-|+||+-+-.+|...... ....++++.+++.+.
T Consensus 166 ~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~--------~~~~~~~~nlssvli 237 (498)
T COG2939 166 DEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED--------NIALNGNVNLSSVLI 237 (498)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh--------ccccCCceEeeeeee
Confidence 11222333333334 34444333321 124899999999999888887764211 113455555555432
Q ss_pred cchhhhhhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCC-CCcCChHH
Q 025236 167 CSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGV-GHYTVPEE 237 (256)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-~H~~~~~~ 237 (256)
........+ .....=.|+..-.+..|...+.+..+++.+.... ..-....+|+ +|.....+
T Consensus 238 gng~~t~Pl------~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~----d~~~~l~~g~~~~~~~~~c 299 (498)
T COG2939 238 GNGLWTDPL------TQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAG----DYCLALMKGCYDSGSLQPC 299 (498)
T ss_pred cCCcccChh------HHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhh----hhHhhhccCCCCchhhhHH
Confidence 222100000 0111112444446777777776666555554432 3334444555 66554443
No 219
>PLN02719 triacylglycerol lipase
Probab=95.40 E-value=0.2 Score=41.71 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCC----CCceeEEeEeCchhHHHHHHHHHh
Q 025236 104 SAAHVANLLSTEP----ADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 104 ~~~~l~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
....|.+++.... ...+|.+.|||+||.+|+.+|...
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 3445555444322 224899999999999999998764
No 220
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.36 E-value=0.034 Score=42.31 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=26.1
Q ss_pred HHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 107 HVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 107 ~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+..-+.+.+++.+|.|.|||+||.+|..+..+.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3333445567777999999999999999987753
No 221
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.36 E-value=0.034 Score=42.31 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=26.1
Q ss_pred HHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 107 HVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 107 ~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+..-+.+.+++.+|.|.|||+||.+|..+..+.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3333445567777999999999999999987753
No 222
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.27 E-value=0.12 Score=41.20 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=50.2
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeec
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHG 195 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G 195 (256)
....+|.|+|||+|+.+...++....+. .....+.-++++....+....-... ......-.+.-++.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~------~~~~lVe~VvL~Gapv~~~~~~W~~-------~r~vVsGr~vN~YS 283 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAER------KAFGLVENVVLMGAPVPSDPEEWRK-------IRSVVSGRLVNVYS 283 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhc------cccCeEeeEEEecCCCCCCHHHHHH-------HHHHccCeEEEEec
Confidence 3445799999999999999888875322 1133467788887766654332222 22445678999999
Q ss_pred CCCccc
Q 025236 196 SGDDVV 201 (256)
Q Consensus 196 ~~D~~~ 201 (256)
++|.+.
T Consensus 284 ~~D~vL 289 (345)
T PF05277_consen 284 ENDWVL 289 (345)
T ss_pred CcHHHH
Confidence 999886
No 223
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.09 E-value=0.26 Score=40.85 Aligned_cols=63 Identities=19% Similarity=0.259 Sum_probs=44.7
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhc---------------CC----cc-eEEEEeCCCCCcCChHHHHHHHHHHH
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSV---------------GF----RD-LTFRCYNGVGHYTVPEEMDEVRNWLT 246 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~---------------~~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 246 (256)
..++|+..|+.|.++|+-..+.+.+.|+=. |. .+ .+++.+-|+||... ...+...+-+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 579999999999999999999888888511 11 12 67888889999984 33444444444
Q ss_pred HHhh
Q 025236 247 ARLE 250 (256)
Q Consensus 247 ~~l~ 250 (256)
+.+.
T Consensus 426 ~Fi~ 429 (433)
T PLN03016 426 RWIS 429 (433)
T ss_pred HHHc
Confidence 4443
No 224
>PLN02761 lipase class 3 family protein
Probab=94.90 E-value=0.045 Score=45.53 Aligned_cols=22 Identities=41% Similarity=0.525 Sum_probs=19.6
Q ss_pred ceeEEeEeCchhHHHHHHHHHh
Q 025236 119 IKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+|.+.|||+||.+|+..|...
T Consensus 294 ~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHH
Confidence 4899999999999999998754
No 225
>PLN02847 triacylglycerol lipase
Probab=94.69 E-value=0.063 Score=45.39 Aligned_cols=25 Identities=28% Similarity=0.288 Sum_probs=21.1
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.++-++.++|||+||.+|..++...
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHHH
Confidence 4445999999999999999988764
No 226
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.57 E-value=0.088 Score=36.48 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=25.6
Q ss_pred eecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC
Q 025236 193 CHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV 234 (256)
Q Consensus 193 ~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 234 (256)
..|+.|.++|+....++... .+.+.++.| .|..+
T Consensus 170 ~v~skDkIFpp~nq~ayw~~-------rc~v~ei~g-~H~~F 203 (214)
T COG2830 170 YVGSKDKIFPPANQHAYWNA-------RCAVIEING-EHYLF 203 (214)
T ss_pred hccCCCcccCCcchhhhhcc-------ceeEEEecC-cceEE
Confidence 45899999999887666654 377888886 88643
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.54 E-value=0.053 Score=43.28 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=21.5
Q ss_pred CCceeEEeEeCchhHHHHHHHHHhh
Q 025236 117 ADIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
++-+|.+.|||+||.+|..+|....
T Consensus 169 ~~~~i~vTGHSLGgAlA~laa~~i~ 193 (336)
T KOG4569|consen 169 PNYSIWVTGHSLGGALASLAALDLV 193 (336)
T ss_pred CCcEEEEecCChHHHHHHHHHHHHH
Confidence 3559999999999999999998653
No 228
>PLN02209 serine carboxypeptidase
Probab=94.47 E-value=0.73 Score=38.33 Aligned_cols=63 Identities=19% Similarity=0.293 Sum_probs=45.4
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhc---------------CC----cc-eEEEEeCCCCCcCChHHHHHHHHHHH
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSV---------------GF----RD-LTFRCYNGVGHYTVPEEMDEVRNWLT 246 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~---------------~~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 246 (256)
.+++|+..|+.|.++++-..+.+.+.|+=. |. .+ .+++.+-|+||... ...+...+-++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999999999888888511 11 23 67888889999984 44444555555
Q ss_pred HHhh
Q 025236 247 ARLE 250 (256)
Q Consensus 247 ~~l~ 250 (256)
+.+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 5443
No 229
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.23 E-value=0.084 Score=43.20 Aligned_cols=26 Identities=23% Similarity=0.154 Sum_probs=21.3
Q ss_pred CCCceeEEeEeCchhHHHHHHHHHhh
Q 025236 116 PADIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
....+++|++|||||.+.+.+.....
T Consensus 179 ~G~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 179 NGGKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred cCCCceEEEecCCccHHHHHHHhccc
Confidence 34469999999999999998877653
No 230
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=94.18 E-value=0.22 Score=35.67 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=41.2
Q ss_pred CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEec-cCCCcchhhhhhccCChHHHhhcCCCCEEEeec
Q 025236 117 ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLS-GWLPCSRTLKSRMEGSREATRRAASLPILLCHG 195 (256)
Q Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G 195 (256)
+..++.++|||+|+.++-..+... ...+..++.+. |-+..... . ........++...+
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~~-----------~~~vddvv~~GSPG~g~~~a--~--------~l~~~~~~v~a~~a 165 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQG-----------GLRVDDVVLVGSPGMGVDSA--S--------DLGVPPGHVYAMTA 165 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhhC-----------CCCcccEEEECCCCCCCCCH--H--------HcCCCCCcEEEeeC
Confidence 455999999999999999888742 45566666553 33332210 0 11222356888888
Q ss_pred CCCcccc
Q 025236 196 SGDDVVA 202 (256)
Q Consensus 196 ~~D~~~~ 202 (256)
..|++-.
T Consensus 166 ~~D~I~~ 172 (177)
T PF06259_consen 166 PGDPIAY 172 (177)
T ss_pred CCCCccc
Confidence 8887643
No 231
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=93.93 E-value=0.055 Score=31.34 Aligned_cols=21 Identities=24% Similarity=0.616 Sum_probs=12.0
Q ss_pred CCCceEEEEEccCCCCCCchH
Q 025236 30 GKHQATIVWLHGLSDKGSSWS 50 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~ 50 (256)
..++|+|++.||..+++..|.
T Consensus 40 ~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 40 NKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TTT--EEEEE--TT--GGGGC
T ss_pred CCCCCcEEEECCcccChHHHH
Confidence 357899999999999988773
No 232
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=93.90 E-value=0.39 Score=37.46 Aligned_cols=109 Identities=14% Similarity=0.047 Sum_probs=54.9
Q ss_pred CCCCceEEEEEccC----CCCC-CchHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHH
Q 025236 29 KGKHQATIVWLHGL----SDKG-SSWSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLD 102 (256)
Q Consensus 29 ~~~~~~~vl~~HG~----~~~~-~~~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (256)
.+..+.+|+++-|. |.+. .+...+...|.. .+..++++--+|-|....... .-.|..+.. .......-..+.
T Consensus 27 ~ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdav-vdvrrrl~~-~~~gsmFg~gL~ 104 (423)
T COG3673 27 EDSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAV-VDVRRRLEK-LSGGSMFGQGLV 104 (423)
T ss_pred ccCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhh-HHHHHhhhh-hhhHHHHHHHHH
Confidence 34567799999994 3332 445556666664 677777764444332211100 000100000 000001112333
Q ss_pred HHHHHHHHHHhcC-CCCceeEEeEeCchhHHHHHHHHH
Q 025236 103 ASAAHVANLLSTE-PADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 103 ~~~~~l~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+-+.....++... -+.++|+++|||-|++++--+|.-
T Consensus 105 ~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 105 QNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 3333333333333 355799999999999998766653
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.56 E-value=0.51 Score=35.38 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=31.8
Q ss_pred ccHHHHHHHHHHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhh
Q 025236 99 EGLDASAAHVANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRIL 142 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~ 142 (256)
+++.+-++.+.+.+.... ..++++++|+|+|+.++...+.+...
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 445555666666665422 45689999999999999998887643
No 234
>PF03283 PAE: Pectinacetylesterase
Probab=93.01 E-value=3.5 Score=33.42 Aligned_cols=24 Identities=25% Similarity=0.295 Sum_probs=19.5
Q ss_pred CCCceeEEeEeCchhHHHHHHHHH
Q 025236 116 PADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
...++++|.|.|.||..++..+-.
T Consensus 153 ~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 153 PNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred cccceEEEeccChHHHHHHHHHHH
Confidence 334699999999999999876654
No 235
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.23 E-value=3.5 Score=34.44 Aligned_cols=59 Identities=25% Similarity=0.422 Sum_probs=41.6
Q ss_pred CCEEEeecCCCccccchhhHHHHHHHhhc----------------CC----cceEEEEeCCCCCcCChHH----HHHHHH
Q 025236 188 LPILLCHGSGDDVVAYKHGERSAQTLNSV----------------GF----RDLTFRCYNGVGHYTVPEE----MDEVRN 243 (256)
Q Consensus 188 ~p~l~~~G~~D~~~~~~~~~~~~~~l~~~----------------~~----~~~~~~~~~g~~H~~~~~~----~~~~~~ 243 (256)
.+++|..|+.|.++|.-..+.+.+.|.-. |. .+..+..+.|+||....+. +..+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999999888887776421 00 1245678889999876433 344555
Q ss_pred HHH
Q 025236 244 WLT 246 (256)
Q Consensus 244 ~l~ 246 (256)
||.
T Consensus 444 fl~ 446 (454)
T KOG1282|consen 444 FLN 446 (454)
T ss_pred HHc
Confidence 554
No 236
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=91.35 E-value=0.86 Score=38.29 Aligned_cols=98 Identities=14% Similarity=0.099 Sum_probs=53.4
Q ss_pred CCCceEEEEEccCCCCCCchHHHhh-----------hcC------CCCeEEEeeCCC-CCCCcccCCCccccccccCCCC
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQLLE-----------TLP------LPNIKWICPTAP-TRPVAIFGGYPCTAWFDVGDLS 91 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~~~~-----------~l~------~~g~~vi~~d~~-~~~~~~~~~~~~~~~~~~~~~~ 91 (256)
.+..|+|||++|+.+.+..+..+.+ .+. .+...++.+|.| |.|.+.....
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~------------ 141 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKA------------ 141 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCC------------
Confidence 3467999999998766544322110 111 233577778864 5444332110
Q ss_pred CCCCCCcccH-HHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 92 EDGPDDLEGL-DASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 92 ~~~~~~~~~~-~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
....+.+.+ .+....+..++.+. ....+++|+|+|+||..+-.+|...
T Consensus 142 -~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 142 -DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred -CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 001111222 22333333333322 2346999999999999988888765
No 237
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.29 E-value=0.61 Score=37.09 Aligned_cols=63 Identities=19% Similarity=0.259 Sum_probs=45.7
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhc---------------CC----cc-eEEEEeCCCCCcCChHHHHHHHHHHH
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSV---------------GF----RD-LTFRCYNGVGHYTVPEEMDEVRNWLT 246 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~---------------~~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 246 (256)
..++|+..|+.|.++|+-..+.+.+.|+=. |. .+ .++..+-|+||+.. ...+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 589999999999999999999888888611 11 12 77788889999985 34445555555
Q ss_pred HHhh
Q 025236 247 ARLE 250 (256)
Q Consensus 247 ~~l~ 250 (256)
+.+.
T Consensus 312 ~fi~ 315 (319)
T PLN02213 312 RWIS 315 (319)
T ss_pred HHHc
Confidence 5444
No 238
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=91.08 E-value=1.2 Score=36.99 Aligned_cols=113 Identities=13% Similarity=-0.005 Sum_probs=65.7
Q ss_pred CCceEEEEEccCCCCCCchH-----HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWS-----QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~-----~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (256)
...|+.|++-|-|.-...|. .+....++.|-.|+..++|.-|.+..-+.... . ....-+..+++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st--------~---nlk~LSs~QAL 152 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLST--------S---NLKYLSSLQAL 152 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcc--------c---chhhhhHHHHH
Confidence 45678888888666554442 23333345577899998887654432211110 0 00111223333
Q ss_pred HHHHHHHhc---C--CC-CceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCC
Q 025236 106 AHVANLLST---E--PA-DIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWL 165 (256)
Q Consensus 106 ~~l~~~~~~---~--~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 165 (256)
.++.++|+. . .. +.+++.+|-|+-|.++..+=. ++|+.+.|.|+-|+.+
T Consensus 153 aDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~-----------~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 153 ADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE-----------KYPELTVGSVASSAPV 207 (514)
T ss_pred HHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH-----------hCchhheeecccccce
Confidence 333333322 2 22 249999999999999887755 5699999988877754
No 239
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.48 E-value=3.7 Score=31.95 Aligned_cols=40 Identities=23% Similarity=0.161 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHH-hcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 101 LDASAAHVANLL-STEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 101 ~~~~~~~l~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+...+......+ ....+.++|+++|+|-|+++|=.++...
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 444444333333 3334557999999999999998887653
No 240
>PLN02209 serine carboxypeptidase
Probab=90.17 E-value=0.95 Score=37.66 Aligned_cols=42 Identities=10% Similarity=-0.084 Sum_probs=27.7
Q ss_pred ccHHHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 99 EGLDASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
++..+....+..++... ....+++|.|.|+||+-+-.+|...
T Consensus 145 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i 188 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEI 188 (437)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHH
Confidence 34455555666666543 2335899999999998766666543
No 241
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=90.11 E-value=2 Score=35.90 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=53.5
Q ss_pred CCceEEEEEccCCCCCCc---hHHHhhhcCC-CCeEEEeeCCCCCCCcccCCCcccccccc-CCCCCCCCCCcccHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSS---WSQLLETLPL-PNIKWICPTAPTRPVAIFGGYPCTAWFDV-GDLSEDGPDDLEGLDASA 105 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~---~~~~~~~l~~-~g~~vi~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 105 (256)
.+.-++|++-|+|.-+.. -..=.+.|+. .+..|+.+++|-...+- .-+ ......+..-.-|-.-++
T Consensus 133 ~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGF---------L~l~~~~eaPGNmGl~DQqLAl 203 (601)
T KOG4389|consen 133 YNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGF---------LYLPGHPEAPGNMGLLDQQLAL 203 (601)
T ss_pred CCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceE---------EecCCCCCCCCccchHHHHHHH
Confidence 344589999987643221 1112344543 45777778877532211 111 111222222233456667
Q ss_pred HHHHHHHhc-CCCCceeEEeEeCchhHHHH
Q 025236 106 AHVANLLST-EPADIKLGIGGFSMGAAIAL 134 (256)
Q Consensus 106 ~~l~~~~~~-~~~~~~i~l~G~S~Gg~~a~ 134 (256)
.++.+.+.. ..++++|.|+|.|.|+.-..
T Consensus 204 ~WV~~Ni~aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 204 QWVQENIAAFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred HHHHHhHHHhCCCcceEEEeccccchhhhh
Confidence 788887765 34457999999999997544
No 242
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.54 E-value=0.85 Score=36.86 Aligned_cols=39 Identities=21% Similarity=0.405 Sum_probs=23.0
Q ss_pred CCCceEEEEEccCCC-CCCchHHHhhhcC--CCCeEEEeeCC
Q 025236 30 GKHQATIVWLHGLSD-KGSSWSQLLETLP--LPNIKWICPTA 68 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~-~~~~~~~~~~~l~--~~g~~vi~~d~ 68 (256)
.++.-.|++.||..+ +...|...+.... ..+..++.-..
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~ 118 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGK 118 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeecc
Confidence 345669999999877 4555665554443 23444444333
No 243
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=89.03 E-value=0.45 Score=36.13 Aligned_cols=118 Identities=18% Similarity=0.142 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHh
Q 025236 104 SAAHVANLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATR 183 (256)
Q Consensus 104 ~~~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 183 (256)
.++.+.+.+... -.|+|-+.|..++..++......-+.......-+..|.-++++++|..+.-.-..+...+...
T Consensus 3 il~~l~~~i~~~-----~pIig~gaGtGlsAk~ae~gGaDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp 77 (268)
T PF09370_consen 3 ILDRLRAQIKAG-----KPIIGAGAGTGLSAKCAEKGGADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILP 77 (268)
T ss_dssp HHHHHHHHHHTT-------EEEEEESSHHHHHHHHHTT-SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhCC-----CceEEEeeccchhhHHHHhcCCCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhh
Confidence 345565555543 348899999999999988531000000000011223333445556643311111111122233
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCC
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGH 231 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 231 (256)
...++|++.-.+..|+.. ....+.+.+++.|. .-+..||..|.
T Consensus 78 ~v~~tPViaGv~atDP~~---~~~~fl~~lk~~Gf--~GV~NfPTvgl 120 (268)
T PF09370_consen 78 VVKDTPVIAGVCATDPFR---DMDRFLDELKELGF--SGVQNFPTVGL 120 (268)
T ss_dssp G-SSS-EEEEE-TT-TT-----HHHHHHHHHHHT---SEEEE-S-GGG
T ss_pred hccCCCEEEEecCcCCCC---cHHHHHHHHHHhCC--ceEEECCccee
Confidence 345689999999999775 44589999999887 67777887665
No 244
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=88.35 E-value=1.5 Score=36.43 Aligned_cols=42 Identities=14% Similarity=-0.015 Sum_probs=28.1
Q ss_pred ccHHHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 99 EGLDASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+...+....+..++... +...+++|.|.|+||..+-.+|...
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i 186 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 186 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHH
Confidence 33445555666666543 2346899999999998777666654
No 245
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=87.18 E-value=1.6 Score=37.29 Aligned_cols=46 Identities=26% Similarity=0.473 Sum_probs=35.0
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHh-hc-CC-cceEEEEeCCCCCc
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLN-SV-GF-RDLTFRCYNGVGHY 232 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~-~~-~~-~~~~~~~~~g~~H~ 232 (256)
..|.+++||..|.++|..+.-+-+-.+. .. |. ...+++++.++.|+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 6899999999999999987655444443 22 22 36899999998885
No 246
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=85.38 E-value=9.6 Score=30.36 Aligned_cols=66 Identities=15% Similarity=-0.029 Sum_probs=39.2
Q ss_pred cHHHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 100 GLDASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 100 ~~~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
...+....|..++... +...+++|.|-|+||+-+-.+|......... ....+-.++|++.-.|+..
T Consensus 30 ~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~-~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 30 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI-CCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred HHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc-ccCCceeeeEEEeCCCCCC
Confidence 3455555666665443 3456899999999998777776654221100 0011235778887777654
No 247
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=85.22 E-value=1.2 Score=29.29 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=13.0
Q ss_pred ecCCCCCceEEEEEccCCCCCCchHH
Q 025236 26 VRPKGKHQATIVWLHGLSDKGSSWSQ 51 (256)
Q Consensus 26 ~~~~~~~~~~vl~~HG~~~~~~~~~~ 51 (256)
.++.+....+||++||+.++--.|..
T Consensus 85 ~rs~~~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 85 VRSKRPNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp E--S-TT-EEEEEE--SS--GGGGHH
T ss_pred eeCCCCCCeEEEEECCCCccHHhHHh
Confidence 34455567799999999988665554
No 248
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=85.08 E-value=2.4 Score=35.40 Aligned_cols=45 Identities=11% Similarity=-0.082 Sum_probs=31.4
Q ss_pred CCcccHHHHHHHHHHHHhcC--CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 96 DDLEGLDASAAHVANLLSTE--PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 96 ~~~~~~~~~~~~l~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.+.....+....|.+++.+. +..+.++|.|-|++|+..-.+|.+-
T Consensus 143 ~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 143 GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 34445566667777777653 3456899999999997766666643
No 249
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.81 E-value=7.4 Score=33.49 Aligned_cols=40 Identities=23% Similarity=0.136 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHh-cCCC-CceeEEeEeCchhHHHHHHHHHh
Q 025236 101 LDASAAHVANLLS-TEPA-DIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 101 ~~~~~~~l~~~~~-~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
++.....+.+.+. .... +.+|.-+||||||.++=.++...
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHH
Confidence 3333334444333 2333 55899999999998887777653
No 250
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=83.63 E-value=0.88 Score=30.52 Aligned_cols=27 Identities=19% Similarity=0.463 Sum_probs=21.1
Q ss_pred CCCceEEEEEccCCCCCCchHH--Hhhhc
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQ--LLETL 56 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~--~~~~l 56 (256)
...+|.|+-+||+.+++.+|.. +++.|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 4678999999999999988765 44443
No 251
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.91 E-value=10 Score=32.05 Aligned_cols=61 Identities=13% Similarity=0.135 Sum_probs=37.0
Q ss_pred HHHHHHHHHHh-cCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcch
Q 025236 103 ASAAHVANLLS-TEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSR 169 (256)
Q Consensus 103 ~~~~~l~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 169 (256)
.+-+.+.+.+. ......+|.|+|||+|+-+.+.++.....+ +.-..+..++++....+...
T Consensus 430 kaG~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakk------ke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 430 KAGELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKK------KEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred HHHHHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhc------ccccceeeeeeccCCccCCH
Confidence 33344444443 344556899999999999998777754221 11334556677666555443
No 252
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=82.73 E-value=5.2 Score=28.75 Aligned_cols=45 Identities=20% Similarity=0.305 Sum_probs=32.6
Q ss_pred CCceEEEEEccCCCCCCc-hH-HHhhhcCCCCeEEEeeCCCCCCCcc
Q 025236 31 KHQATIVWLHGLSDKGSS-WS-QLLETLPLPNIKWICPTAPTRPVAI 75 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~-~~-~~~~~l~~~g~~vi~~d~~~~~~~~ 75 (256)
..+|.+||+-|..+++.. .. .+.+.|.+.|+.++..|...--++.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL 66 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGL 66 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcc
Confidence 356799999998877653 33 3667777899999999886543333
No 253
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=80.75 E-value=20 Score=28.54 Aligned_cols=119 Identities=16% Similarity=0.150 Sum_probs=62.9
Q ss_pred CCceEEEEEccCCCCC-C---chHHHhhh---cC------CCCeEEEeeCCCC-CCCcccCCCccccccccCCCCCCCCC
Q 025236 31 KHQATIVWLHGLSDKG-S---SWSQLLET---LP------LPNIKWICPTAPT-RPVAIFGGYPCTAWFDVGDLSEDGPD 96 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~-~---~~~~~~~~---l~------~~g~~vi~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (256)
..+|..+++.|..+.+ . +|+.+... ++ -+...++.+|-|- .|.+--+|. . .
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~------------~---~ 93 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGS------------S---A 93 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCc------------c---c
Confidence 5678999999975432 2 34443221 11 1234566777653 222222221 1 1
Q ss_pred CcccHHHHHHHHHHHHh----c--CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 97 DLEGLDASAAHVANLLS----T--EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~----~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
...+..+...++..+++ . ++...+.+|+..|+||-+|..+++...... ..-.....+.++++-.+|+.
T Consensus 94 Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aI--k~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 94 YTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAI--KRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHH--hcCceeecceeEEccCcccC
Confidence 12233333444444433 2 244569999999999999999988652210 01112345667776666654
No 254
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=77.86 E-value=43 Score=28.56 Aligned_cols=130 Identities=12% Similarity=0.143 Sum_probs=75.1
Q ss_pred CcccHHHHHHHHHHHHhcCC-CCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhc
Q 025236 97 DLEGLDASAAHVANLLSTEP-ADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRM 175 (256)
Q Consensus 97 ~~~~~~~~~~~l~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 175 (256)
..+.+....+.+.+.+.... .+-+|...|.---.--+..+..+. .....+.+++.....+.....+...
T Consensus 17 ~l~~~~~~~~~i~~~l~~~~~~~~~v~~~~~v~~~~~i~~~~~~~---------~~~~~~dgvi~~m~TFs~a~~~i~~- 86 (484)
T cd03557 17 ALKQVAAHSREIVDGLNASGKLPVKIVFKPVLTTPDEILAVCREA---------NADDNCAGVITWMHTFSPAKMWIAG- 86 (484)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEEccccCCHHHHHHHHHHc---------cccCCccEEEEccCCCchHHHHHHH-
Confidence 34445555555555544321 123555555444444344444321 1235688998887766655544433
Q ss_pred cCChHHHhhcCCCCEEEeecCCCccccchh--------------hHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHH
Q 025236 176 EGSREATRRAASLPILLCHGSGDDVVAYKH--------------GERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEV 241 (256)
Q Consensus 176 ~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~--------------~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~ 241 (256)
.+..++|+|+.+-..-.-+|++. ..++...+.+.|+ +.+++. ||.-.++..+.+
T Consensus 87 -------~~~l~~PvL~~~~q~~~~l~~~sidmd~m~l~qaahG~~e~~~il~R~gi-~~~~v~----G~~~d~~~~~~i 154 (484)
T cd03557 87 -------LTALQKPLLHLHTQFNREIPWDTIDMDFMNLNQSAHGDREFGFIGSRMRI-PRKVVV----GHWQDPEVHEKI 154 (484)
T ss_pred -------HHHcCCCEEEEccCCCccCCCCCccchHHhhhhhcCCcHHHHHHHHHcCC-CeeEEE----EeCCCHHHHHHH
Confidence 35678999998877533333332 2344556666676 455544 888778888999
Q ss_pred HHHHHHH
Q 025236 242 RNWLTAR 248 (256)
Q Consensus 242 ~~~l~~~ 248 (256)
.+|++-.
T Consensus 155 ~~w~raa 161 (484)
T cd03557 155 GDWMRAA 161 (484)
T ss_pred HHHHHHH
Confidence 9999754
No 255
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=77.05 E-value=38 Score=27.44 Aligned_cols=85 Identities=12% Similarity=0.215 Sum_probs=46.6
Q ss_pred ccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCccccchhh--------------HHHHHHHhhcC
Q 025236 152 SVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHG--------------ERSAQTLNSVG 217 (256)
Q Consensus 152 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~--------------~~~~~~l~~~~ 217 (256)
.+.+.++|.+--.+...+.+.. ..+..+.|++++|-..+.-+|++.. +++.-.+...|
T Consensus 70 ~~~c~gvi~wMhTfSpakmwI~--------gl~~l~kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~g 141 (359)
T PF02610_consen 70 DEDCDGVITWMHTFSPAKMWIP--------GLQRLQKPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMG 141 (359)
T ss_dssp -TTEEEEEEEESS---THHHHH--------HHHH--S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT
T ss_pred cCCccEEeehhhhhccHHHHHH--------HHHHhCCCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhC
Confidence 5678888876554444443332 3466789999999999998887643 34444455555
Q ss_pred CcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 218 FRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 218 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
. + ..++- ||+-.++..++|.+|++...
T Consensus 142 i-~--~kvV~--G~w~D~~v~~~I~~W~rAA~ 168 (359)
T PF02610_consen 142 I-P--RKVVV--GHWQDEEVWAEIGDWMRAAA 168 (359)
T ss_dssp -----EEEEE--S-TT-HHHHHHHHHHHHHHH
T ss_pred C-C--cCeEe--eeCCCHHHHHHHHHHHHHHH
Confidence 5 3 33333 79888888999999997654
No 256
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=76.15 E-value=36 Score=26.78 Aligned_cols=66 Identities=14% Similarity=0.211 Sum_probs=45.7
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc--CC-----hHHHHHHHHHHHHHhhh
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY--TV-----PEEMDEVRNWLTARLEL 251 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~--~~-----~~~~~~~~~~l~~~l~~ 251 (256)
.++-++-+-|++|.+.-..+.+...+.+....-.-.+.+..+++||. |. .+....+.+||.+.-+.
T Consensus 338 ~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 338 TNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred eceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 35678889999999987777766666554322123567788999997 22 44567888898876443
No 257
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=74.52 E-value=3.8 Score=33.56 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCceEEEEEccCCCCCCchH-HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHH
Q 025236 31 KHQATIVWLHGLSDKGSSWS-QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVA 109 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~~~~-~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (256)
..+|+|++.-|++....... ...+.|.. +-+.+++|.-+.|.... ..|-. .+..+...+.-.|.
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld~---NQl~vEhRfF~~SrP~p---~DW~~---------Lti~QAA~D~Hri~ 125 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLDG---NQLSVEHRFFGPSRPEP---ADWSY---------LTIWQAASDQHRIV 125 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhcc---ceEEEEEeeccCCCCCC---CCccc---------ccHhHhhHHHHHHH
Confidence 45789999999877544322 34444432 33444445433332221 12311 12333344444555
Q ss_pred HHHhcCCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEe
Q 025236 110 NLLSTEPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGL 161 (256)
Q Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 161 (256)
+.++..++. +.+-.|.|=||+.++.+=. -||..+.+.|..
T Consensus 126 ~A~K~iY~~-kWISTG~SKGGmTa~y~rr-----------FyP~DVD~tVaY 165 (448)
T PF05576_consen 126 QAFKPIYPG-KWISTGGSKGGMTAVYYRR-----------FYPDDVDGTVAY 165 (448)
T ss_pred HHHHhhccC-CceecCcCCCceeEEEEee-----------eCCCCCCeeeee
Confidence 555555655 8999999999999887643 347777776654
No 258
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=72.58 E-value=17 Score=30.84 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=33.0
Q ss_pred CceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC
Q 025236 118 DIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP 166 (256)
Q Consensus 118 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 166 (256)
..+-+..|.|-||.-++..|.+. |+.+.|+++-+|.+.
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQry-----------P~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRY-----------PEDFDGILAGAPAIN 151 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhC-----------hhhcCeEEeCCchHH
Confidence 35789999999999999999965 999999999888654
No 259
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=64.79 E-value=56 Score=24.37 Aligned_cols=132 Identities=14% Similarity=0.199 Sum_probs=68.6
Q ss_pred cccHHHHHHHHHHHHhcCCCCceeEEeEeCch-----hHHHHHHHHHhhhccCCCCCCCccCcc--eEEEeccCCCcchh
Q 025236 98 LEGLDASAAHVANLLSTEPADIKLGIGGFSMG-----AAIALYSATCRILGQYGNGNPYSVNLS--AIVGLSGWLPCSRT 170 (256)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~G-----g~~a~~~a~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~ 170 (256)
.+++...++.+.+.+.....+..++++||.-- ++.++..... ...+. .+.++-++... +.
T Consensus 117 k~DYe~~v~aik~~~ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~------------~~~f~~v~v~~ve~yP~~-d~ 183 (265)
T COG4822 117 KNDYEICVEAIKDQIPPLNKDEILVLMGHGTDHHSNAAYACLDHVLD------------EYGFDNVFVAAVEGYPLV-DT 183 (265)
T ss_pred hhhHHHHHHHHHHhcCCcCcCeEEEEEecCCCccHHHHHHHHHHHHH------------hcCCCceEEEEecCCCcH-HH
Confidence 45677777777777765555668999998544 3444443332 23332 22333444333 32
Q ss_pred hhhhccCChHHHhhc-CCCCEEEeecCC---CccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHH
Q 025236 171 LKSRMEGSREATRRA-ASLPILLCHGSG---DDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLT 246 (256)
Q Consensus 171 ~~~~~~~~~~~~~~~-~~~p~l~~~G~~---D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 246 (256)
..+.++.. .... .-.|.+++.|+. |-.- +....+.+.+.+.|. .++ ....|.|- .+......++-|+
T Consensus 184 vi~~l~~~---~~~~v~L~PlMlvAG~Ha~nDMas--ddedswk~il~~~G~-~v~-~~l~GLGE--~~~iq~ifi~Hik 254 (265)
T COG4822 184 VIEYLRKN---GIKEVHLIPLMLVAGDHAKNDMAS--DDEDSWKNILEKNGF-KVE-VYLHGLGE--NPAIQAIFIDHIK 254 (265)
T ss_pred HHHHHHHc---CCceEEEeeeEEeechhhhhhhcc--cchHHHHHHHHhCCc-eeE-EEeecCCC--cHHHHHHHHHHHH
Confidence 22222110 1111 235999998863 3332 223678888999887 553 33455554 2333344455555
Q ss_pred HHhhh
Q 025236 247 ARLEL 251 (256)
Q Consensus 247 ~~l~~ 251 (256)
+.+..
T Consensus 255 ~aie~ 259 (265)
T COG4822 255 DAIER 259 (265)
T ss_pred HHHhh
Confidence 54443
No 260
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=64.52 E-value=5.3 Score=31.33 Aligned_cols=22 Identities=14% Similarity=0.434 Sum_probs=18.9
Q ss_pred CCCceEEEEEccCCCCCCchHH
Q 025236 30 GKHQATIVWLHGLSDKGSSWSQ 51 (256)
Q Consensus 30 ~~~~~~vl~~HG~~~~~~~~~~ 51 (256)
...+|.++-+||+.+++.+|..
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va 127 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVA 127 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHH
Confidence 4678999999999999988764
No 261
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted.; PDB: 2OO3_A.
Probab=64.26 E-value=63 Score=24.74 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=59.4
Q ss_pred eeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCc
Q 025236 120 KLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDD 199 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~ 199 (256)
++.+.. .=|+-++.... -|..-+++|++.|.+-....+............+..+.-+++...-.|
T Consensus 104 ~v~v~~--~DG~~~l~all------------PP~~rRglVLIDPpYE~~~dy~~v~~~l~~a~kR~~~G~~~iWYPi~~- 168 (245)
T PF04378_consen 104 RVRVHH--RDGYEGLKALL------------PPPERRGLVLIDPPYEQKDDYQRVVDALAKALKRWPTGVYAIWYPIKD- 168 (245)
T ss_dssp -EEEE---S-HHHHHHHH-------------S-TTS-EEEEE-----STTHHHHHHHHHHHHHHH-TTSEEEEEEEESS-
T ss_pred ccEEEe--CchhhhhhhhC------------CCCCCCeEEEECCCCCCchHHHHHHHHHHHHHHhcCCcEEEEEeeccc-
Confidence 554442 45566655554 144458999999977666655555444444444444444566554444
Q ss_pred cccchhhHHHHHHHhhcCCc---ceEEEEeCCC-CCcCC-------------hHHHHHHHHHHHHHhhhcc
Q 025236 200 VVAYKHGERSAQTLNSVGFR---DLTFRCYNGV-GHYTV-------------PEEMDEVRNWLTARLELEG 253 (256)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~---~~~~~~~~g~-~H~~~-------------~~~~~~~~~~l~~~l~~~~ 253 (256)
....+.+.+.+++.+.+ .+++.+.+.. ++... .+.++.+..||.+.|...+
T Consensus 169 ---~~~~~~~~~~l~~~~~~~~l~~El~v~~~~~~~gm~GSGm~iiNPPw~l~~~l~~~l~~L~~~L~~~~ 236 (245)
T PF04378_consen 169 ---RERVDRFLRALKALGIKKVLRAELRVRPPDSPRGMNGSGMLIINPPWTLDEELEEILPWLAETLAQDG 236 (245)
T ss_dssp ---HHHHHHHHHHHHHH-SSE-EEEEEE---SS---S--EEEEEEES--TTHHHHHHHHHHHHHHHSSTTT
T ss_pred ---HHHHHHHHHHHHhcCCCCeEEEEEEecCCCCcCceecceEEEEcCCccHHHHHHHHHHHHHHHhCcCC
Confidence 35567888888876653 2566665432 22211 5668999999999998763
No 262
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=63.51 E-value=11 Score=31.11 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=38.0
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-------hHHHHHHHHHHHHH
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-------PEEMDEVRNWLTAR 248 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~~ 248 (256)
...|++++.|.-|.+-+ +....+.+.+...|+ ..-.+..||.|+... ......+++|+...
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGi-A~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGI-AMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT--EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCC-EEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcC
Confidence 45699999999998863 333444566777887 777888899988632 23467888888663
No 263
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=62.02 E-value=10 Score=31.20 Aligned_cols=58 Identities=21% Similarity=0.073 Sum_probs=35.2
Q ss_pred cCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCC-----hHHHHHHHHHHHHHh
Q 025236 185 AASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTV-----PEEMDEVRNWLTARL 249 (256)
Q Consensus 185 ~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l 249 (256)
.....+|+|.|++|++.-. . +...+ |..+....+.||++|... ++....+..-|.++.
T Consensus 349 ~~~~rmlFVYG~nDPW~A~--~---f~l~~--g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAE--P---FRLGK--GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred hCCCeEEEEeCCCCCcccC--c---cccCC--CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 4467899999999988621 1 11111 223678888999999743 333344444444443
No 264
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=60.22 E-value=1e+02 Score=25.71 Aligned_cols=123 Identities=12% Similarity=0.083 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhc---CCCCceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCCcchhhhhhccC
Q 025236 101 LDASAAHVANLLST---EPADIKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLPCSRTLKSRMEG 177 (256)
Q Consensus 101 ~~~~~~~l~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 177 (256)
+.+++..+.+.+.. .++++++++.+.+-++.-++...+.. +. .+...-.|+++....-..
T Consensus 126 frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLad------------pg-dafLvPtPyY~gfdrdl~---- 188 (471)
T KOG0256|consen 126 FRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLAD------------PG-DAFLVPTPYYPGFDRDLR---- 188 (471)
T ss_pred HHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcC------------CC-ceeeecCCCCCcccccce----
Confidence 45555555555543 35667999998888888777776632 22 233333444443221110
Q ss_pred ChHHHhhcCCCCEEEeecC-CC-ccccchhhHHHHHHHhhcCCcceEEEEeCC----CCCcCChHHHHHHHHHHHH
Q 025236 178 SREATRRAASLPILLCHGS-GD-DVVAYKHGERSAQTLNSVGFRDLTFRCYNG----VGHYTVPEEMDEVRNWLTA 247 (256)
Q Consensus 178 ~~~~~~~~~~~p~l~~~G~-~D-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 247 (256)
-...+.+.=+|.. .| ..+..+.-+..++..++.+. +++=+++-+ .|-.+.++.+..+++|..+
T Consensus 189 ------~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~-kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~ 257 (471)
T KOG0256|consen 189 ------WRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGL-KVKGVLITNPSNPLGTTLSPEELISLLNFASR 257 (471)
T ss_pred ------eccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCC-ceeEEEEeCCCCCCCCccCHHHHHHHHHHHhh
Confidence 1112222222222 22 33444555566666666676 666666654 3445668889999999876
No 265
>PRK12467 peptide synthase; Provisional
Probab=58.89 E-value=43 Score=36.91 Aligned_cols=88 Identities=18% Similarity=0.141 Sum_probs=53.5
Q ss_pred CceEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHH
Q 025236 32 HQATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANL 111 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (256)
..+.++..|...++...+..+...+. .+..++.+..... ....| ....+........+.
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~--------~~d~~------------~~~~~~~~~~~y~~~ 3749 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHL--------LDDGW------------QDTSLQAMAVQYADY 3749 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhC-CCCcEEEEecccc--------ccccC------------CccchHHHHHHHHHH
Confidence 44679999998887777777777775 3445555543221 00011 112233333344444
Q ss_pred HhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 112 LSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+....+..+..+.|+|+||.++..++...
T Consensus 3750 ~~~~~~~~p~~l~g~s~g~~~a~~~~~~l 3778 (3956)
T PRK12467 3750 ILWQQAKGPYGLLGWSLGGTLARLVAELL 3778 (3956)
T ss_pred HHHhccCCCeeeeeeecchHHHHHHHHHH
Confidence 44434444788999999999999988865
No 266
>PRK02929 L-arabinose isomerase; Provisional
Probab=58.73 E-value=1.2e+02 Score=26.14 Aligned_cols=84 Identities=12% Similarity=0.164 Sum_probs=55.7
Q ss_pred ccCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCccccch--------------hhHHHHHHHhhcC
Q 025236 152 SVNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYK--------------HGERSAQTLNSVG 217 (256)
Q Consensus 152 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~--------------~~~~~~~~l~~~~ 217 (256)
...+.+++.....+.....+... .+..++|+|+.+-...+-+|++ ...++...+.+.|
T Consensus 70 ~~~~dgvi~~m~TFs~a~~~i~~--------~~~l~~PvL~~~~Q~~~e~p~~~id~d~m~lnqs~~G~~e~~~il~R~g 141 (499)
T PRK02929 70 DDNCAGVITWMHTFSPAKMWIRG--------LSALQKPLLHLHTQFNAEIPWDTIDMDFMNLNQSAHGDREFGFIGARLR 141 (499)
T ss_pred cCCCcEEEEccCCCchHHHHHHH--------HHHcCCCEEEEecCCCccCCCCCCCcchhhhhhcccChHHHHHHHHHcC
Confidence 56688988887766655544333 4567899999998322222221 2346666677777
Q ss_pred CcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 218 FRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 218 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
+ +.+++. ||.-.++..+.+.+|++-.
T Consensus 142 i-~~~~v~----G~~~d~~v~~~i~~w~raa 167 (499)
T PRK02929 142 K-QRKVVV----GHWQDPEVQERIGAWMRVA 167 (499)
T ss_pred C-CeeEEE----EeCCCHHHHHHHHHHHHHH
Confidence 6 444444 8887788889999998754
No 267
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=58.35 E-value=20 Score=27.95 Aligned_cols=92 Identities=18% Similarity=0.036 Sum_probs=49.5
Q ss_pred HHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcCCC--CceeEEeEeCc
Q 025236 51 QLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTEPA--DIKLGIGGFSM 128 (256)
Q Consensus 51 ~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~i~l~G~S~ 128 (256)
.-.+++-.-+..++++.+... +.|..+-. +.....+.....++.+.+.....+. .-+++|+|.|+
T Consensus 52 ~a~E~l~~GD~A~va~QYSyl----------PSw~sfl~---dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSL 118 (289)
T PF10081_consen 52 DALEYLYGGDVAIVAMQYSYL----------PSWLSFLV---DRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESL 118 (289)
T ss_pred hHHHHHhCCCeEEEEeccccc----------cchHHHhc---ccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCc
Confidence 345566556688888877543 24544311 1111122333444445444444332 24899999999
Q ss_pred hhHHHHHHHHHhhhccCCCCCCCccCcceEEEecc
Q 025236 129 GAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSG 163 (256)
Q Consensus 129 Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (256)
|++.+........ .....+.+++...+
T Consensus 119 Ga~g~~~af~~~~--------~~~~~vdGalw~Gp 145 (289)
T PF10081_consen 119 GAYGGEAAFDGLD--------DLRDRVDGALWVGP 145 (289)
T ss_pred cccchhhhhccHH--------HhhhhcceEEEeCC
Confidence 9987766543210 11345677766554
No 268
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only]
Probab=52.23 E-value=1.1e+02 Score=23.63 Aligned_cols=96 Identities=15% Similarity=0.173 Sum_probs=60.2
Q ss_pred cCcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcc---eEEEEeCCC
Q 025236 153 VNLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRD---LTFRCYNGV 229 (256)
Q Consensus 153 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~g~ 229 (256)
..-+|+|++.|.+.....+...............+.-..|.. +++.-+..+.+.+.+++.++++ +++.+-|..
T Consensus 154 ~erRglVLIDPPfE~~~eY~rvv~~l~~~~kRf~~g~yaiWY----Pik~r~~~~~f~~~L~~~~i~kiL~iEL~VrP~~ 229 (279)
T COG2961 154 KERRGLVLIDPPFELKDEYQRVVEALAEAYKRFATGTYAIWY----PIKDRRQIRRFLRALEALGIRKILQIELAVRPDS 229 (279)
T ss_pred CCcceEEEeCCCcccccHHHHHHHHHHHHHHhhcCceEEEEE----eecchHHHHHHHHHHhhcCccceeeeEEEecCCC
Confidence 334899999998877665554444333333333333333433 4444567789999999888743 466666543
Q ss_pred CC-cC-------------ChHHHHHHHHHHHHHhhhc
Q 025236 230 GH-YT-------------VPEEMDEVRNWLTARLELE 252 (256)
Q Consensus 230 ~H-~~-------------~~~~~~~~~~~l~~~l~~~ 252 (256)
+- .+ ..+.+..+..||.+.+..+
T Consensus 230 d~~gm~gSGMivINPPwtle~ql~~~LP~L~~~L~~~ 266 (279)
T COG2961 230 DPRGMNGSGMIVINPPWTLEQQLRAALPWLTTLLAQD 266 (279)
T ss_pred CCCCccceeEEEECCCccHHHHHHHHHHHHHHHhccC
Confidence 22 11 1567889999999999876
No 269
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=51.27 E-value=59 Score=24.39 Aligned_cols=64 Identities=23% Similarity=0.416 Sum_probs=33.4
Q ss_pred CCCEEEeecCCC-ccccchhhHHHHHHHhhcCCcceEEEE--eCCCCCcC-------ChHHHHHHHHHHHHHhhhcc
Q 025236 187 SLPILLCHGSGD-DVVAYKHGERSAQTLNSVGFRDLTFRC--YNGVGHYT-------VPEEMDEVRNWLTARLELEG 253 (256)
Q Consensus 187 ~~p~l~~~G~~D-~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~g~~H~~-------~~~~~~~~~~~l~~~l~~~~ 253 (256)
+.|++++||..+ ....+ ..+...|++.|....++.- |....... ..+..+.+.+|+.+.++..+
T Consensus 1 ~~PVVlVHG~~~~~~~~w---~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG 74 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNW---STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG 74 (219)
T ss_dssp S--EEEE--TTTTTCGGC---CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCcchhhCH---HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC
Confidence 359999999997 43333 3677888888863322333 22222211 12334688889988876554
No 270
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=50.15 E-value=76 Score=25.19 Aligned_cols=22 Identities=23% Similarity=0.099 Sum_probs=18.9
Q ss_pred ceeEEeEeCchhHHHHHHHHHh
Q 025236 119 IKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.++.|+|||=|+.+--.+....
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El 214 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYEL 214 (303)
T ss_pred CceEEEEecCcchHHHHHHHHH
Confidence 3899999999999988887765
No 271
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=49.70 E-value=4.4 Score=13.97 Aligned_cols=6 Identities=67% Similarity=1.425 Sum_probs=2.8
Q ss_pred EeCchh
Q 025236 125 GFSMGA 130 (256)
Q Consensus 125 G~S~Gg 130 (256)
|+++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 345544
No 272
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=49.28 E-value=1e+02 Score=25.33 Aligned_cols=19 Identities=21% Similarity=-0.057 Sum_probs=15.5
Q ss_pred EEeEeCchhHHHHHHHHHh
Q 025236 122 GIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~~~ 140 (256)
+..-.|.||.-|+++++..
T Consensus 95 v~t~Qt~GGTGAL~~~A~f 113 (396)
T COG1448 95 VATVQTLGGTGALRVAADF 113 (396)
T ss_pred HhheecCCcchHHHHHHHH
Confidence 4456899999999999865
No 273
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=48.97 E-value=32 Score=27.77 Aligned_cols=76 Identities=24% Similarity=0.281 Sum_probs=46.7
Q ss_pred HHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcCCCCceeEEeEeCch
Q 025236 50 SQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTEPADIKLGIGGFSMG 129 (256)
Q Consensus 50 ~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~l~G~S~G 129 (256)
..+.+.|..+|+.|.++-+.......- ......=+..+++-+.+.+...+..+.+++....+ ++|.|+|
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl------~~~pDGiflSNGPGDP~~~~~~i~~ik~l~~~~iP-----ifGICLG 259 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEIL------ALNPDGIFLSNGPGDPAPLDYAIETIKELLGTKIP-----IFGICLG 259 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHH------hhCCCEEEEeCCCCChhHHHHHHHHHHHHhccCCC-----eEEEcHH
Confidence 467888888999888874432110000 00000112334556677888888898888876433 8999999
Q ss_pred hHHHHHH
Q 025236 130 AAIALYS 136 (256)
Q Consensus 130 g~~a~~~ 136 (256)
=.+..++
T Consensus 260 HQllalA 266 (368)
T COG0505 260 HQLLALA 266 (368)
T ss_pred HHHHHHh
Confidence 8765443
No 274
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=48.07 E-value=46 Score=24.78 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=24.4
Q ss_pred cCCCCCceEEEEEccCCCCCCc-hHHHhhhcCCCCe-EEEee
Q 025236 27 RPKGKHQATIVWLHGLSDKGSS-WSQLLETLPLPNI-KWICP 66 (256)
Q Consensus 27 ~~~~~~~~~vl~~HG~~~~~~~-~~~~~~~l~~~g~-~vi~~ 66 (256)
+|-.+...+|++.||....+.. |.-+-..+.+.|| .|++.
T Consensus 132 ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~ 173 (265)
T COG4822 132 PPLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVA 173 (265)
T ss_pred CCcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEE
Confidence 3444566799999997766554 3334445556777 44443
No 275
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=47.56 E-value=46 Score=20.17 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=25.2
Q ss_pred ccHHHHHHHHHHHHhcC---CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 99 EGLDASAAHVANLLSTE---PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 99 ~~~~~~~~~l~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
......+..-.+.++.. ..+.++.++|-|-|=.+|.+.++..
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 33444444444443331 2235899999999999998887753
No 276
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=47.23 E-value=23 Score=27.31 Aligned_cols=14 Identities=29% Similarity=0.242 Sum_probs=12.0
Q ss_pred CceeEEeEeCchhH
Q 025236 118 DIKLGIGGFSMGAA 131 (256)
Q Consensus 118 ~~~i~l~G~S~Gg~ 131 (256)
...|+++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 35899999999975
No 277
>COG0536 Obg Predicted GTPase [General function prediction only]
Probab=46.46 E-value=1.2e+02 Score=24.61 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=68.4
Q ss_pred EEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEEeccCCC--cchhhhhhccCChHHHhhcCCCCEEEeecCCCc
Q 025236 122 GIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVGLSGWLP--CSRTLKSRMEGSREATRRAASLPILLCHGSGDD 199 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~ 199 (256)
.|=|-|.|..+...++.+.-+ ...+--+|-+++.-. ..+.+.................|.+++.-.-|.
T Consensus 217 LIEGAs~G~GLG~~FLrHIER---------t~vL~hviD~s~~~~~dp~~~~~~i~~EL~~Y~~~L~~K~~ivv~NKiD~ 287 (369)
T COG0536 217 LIEGASEGVGLGLRFLRHIER---------TRVLLHVIDLSPIDGRDPIEDYQTIRNELEKYSPKLAEKPRIVVLNKIDL 287 (369)
T ss_pred cccccccCCCccHHHHHHHHh---------hheeEEEEecCcccCCCHHHHHHHHHHHHHHhhHHhccCceEEEEeccCC
Confidence 344999999999999886411 122233444444322 111121111122233445667899999999998
Q ss_pred cccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHH
Q 025236 200 VVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTAR 248 (256)
Q Consensus 200 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 248 (256)
..+.+..+.+.+.+.+.......+. +....+.-..+....+.+++.+.
T Consensus 288 ~~~~e~~~~~~~~l~~~~~~~~~~~-ISa~t~~g~~~L~~~~~~~l~~~ 335 (369)
T COG0536 288 PLDEEELEELKKALAEALGWEVFYL-ISALTREGLDELLRALAELLEET 335 (369)
T ss_pred CcCHHHHHHHHHHHHHhcCCCccee-eehhcccCHHHHHHHHHHHHHHh
Confidence 8888888888888875322122222 55555555566666666666655
No 278
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=43.66 E-value=91 Score=20.39 Aligned_cols=76 Identities=11% Similarity=-0.089 Sum_probs=43.9
Q ss_pred EEEEEccCCCCCCchHHHhhhcCCC-CeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHh
Q 025236 35 TIVWLHGLSDKGSSWSQLLETLPLP-NIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLS 113 (256)
Q Consensus 35 ~vl~~HG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (256)
+||..|| .-+..+...++.+... .-.+.++++.. ..+..+..+.+.+.+.
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~---------------------------~~~~~~~~~~l~~~i~ 52 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP---------------------------DESIEDFEEKLEEAIE 52 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT---------------------------TSCHHHHHHHHHHHHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC---------------------------CCCHHHHHHHHHHHHH
Confidence 6888899 3444555666665533 22333333321 1224555556666665
Q ss_pred cCCCCceeEEeEeCchhHHHHHHHHH
Q 025236 114 TEPADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 114 ~~~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
+....+.+.++--=+||.....++..
T Consensus 53 ~~~~~~~vlil~Dl~ggsp~n~a~~~ 78 (116)
T PF03610_consen 53 ELDEGDGVLILTDLGGGSPFNEAARL 78 (116)
T ss_dssp HCCTTSEEEEEESSTTSHHHHHHHHH
T ss_pred hccCCCcEEEEeeCCCCccchHHHHH
Confidence 54445688888888888776666554
No 279
>COG4425 Predicted membrane protein [Function unknown]
Probab=43.14 E-value=45 Score=27.95 Aligned_cols=34 Identities=26% Similarity=0.130 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhcCCC--CceeEEeEeCchhHHHHH
Q 025236 102 DASAAHVANLLSTEPA--DIKLGIGGFSMGAAIALY 135 (256)
Q Consensus 102 ~~~~~~l~~~~~~~~~--~~~i~l~G~S~Gg~~a~~ 135 (256)
+...+.+.......+. ..|.+|.|-|+|++-...
T Consensus 378 ~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 378 RALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred HHHHHHHHHHHHhCCcCCCCceEEeccccccccCcc
Confidence 3334444444443322 238999999999987655
No 280
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=42.71 E-value=43 Score=26.66 Aligned_cols=22 Identities=27% Similarity=0.153 Sum_probs=17.9
Q ss_pred CCceeEEeEeCchhHHHHHHHH
Q 025236 117 ADIKLGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~ 138 (256)
...+.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4457899999999999887664
No 281
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=42.16 E-value=12 Score=29.00 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=26.8
Q ss_pred eEEEEEccCCCCCCchHHHhhhcCCCCeEEEeeC
Q 025236 34 ATIVWLHGLSDKGSSWSQLLETLPLPNIKWICPT 67 (256)
Q Consensus 34 ~~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d 67 (256)
..||++|-...+......+...|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3688999866666667778899999999988763
No 282
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=41.34 E-value=68 Score=20.77 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=28.6
Q ss_pred chhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHhhh
Q 025236 203 YKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLEL 251 (256)
Q Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 251 (256)
.+.++++.+.+++.|. ..+ .+|.+..+.++.+.+..++.+..
T Consensus 14 ~~~~~~l~~A~~~~GF--f~l-----~nhGi~~~l~~~~~~~~~~fF~l 55 (116)
T PF14226_consen 14 EEVAEQLRDACEEWGF--FYL-----VNHGIPQELIDRVFAAAREFFAL 55 (116)
T ss_dssp HHHHHHHHHHHHHTSE--EEE-----ESSSSSHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhCCE--EEE-----ecccccchhhHHHHHHHHHHHHh
Confidence 3456788888887665 333 47888887777777777766643
No 283
>COG1647 Esterase/lipase [General function prediction only]
Probab=40.84 E-value=1.2e+02 Score=22.90 Aligned_cols=56 Identities=27% Similarity=0.449 Sum_probs=37.0
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHH-H-HHHHHHHHH
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEM-D-EVRNWLTAR 248 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~-~-~~~~~l~~~ 248 (256)
+.-+|++||=.- .+...+.+.+.|.+.|. .+..=.+| ||...++.+ + .-.+|+++.
T Consensus 15 ~~AVLllHGFTG---t~~Dvr~Lgr~L~e~Gy-Tv~aP~yp--GHG~~~e~fl~t~~~DW~~~v 72 (243)
T COG1647 15 NRAVLLLHGFTG---TPRDVRMLGRYLNENGY-TVYAPRYP--GHGTLPEDFLKTTPRDWWEDV 72 (243)
T ss_pred CEEEEEEeccCC---CcHHHHHHHHHHHHCCc-eEecCCCC--CCCCCHHHHhcCCHHHHHHHH
Confidence 356888888543 45778899999999877 55555566 787776432 2 244555544
No 284
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=40.58 E-value=18 Score=25.42 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=25.9
Q ss_pred ceEEEEEccCCCCCCc-hH-HHhhhcCCCCeEEEeeCCC
Q 025236 33 QATIVWLHGLSDKGSS-WS-QLLETLPLPNIKWICPTAP 69 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~-~~-~~~~~l~~~g~~vi~~d~~ 69 (256)
+|.|||+-|..+++.. .. .+.+.|.+.|..++..|..
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 4789999998877653 22 2556676789999999864
No 285
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=39.24 E-value=1.7e+02 Score=22.76 Aligned_cols=38 Identities=11% Similarity=0.227 Sum_probs=30.3
Q ss_pred CceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEeeCCC
Q 025236 32 HQATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICPTAP 69 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~ 69 (256)
..|+||++.|+.+.+. ....+...|-.+|+.|.++..+
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4689999999876554 4667888898899999998554
No 286
>PLN02606 palmitoyl-protein thioesterase
Probab=38.82 E-value=2e+02 Score=22.93 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=26.5
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhc-CCcceEEEEe
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSV-GFRDLTFRCY 226 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 226 (256)
...|++++||--|...+. ....+.+.+.+. +. ....+.+
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~-pg~~v~i 64 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGY-PGTCVEI 64 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCC-CeEEEEE
Confidence 367999999999987764 666777777533 55 3344433
No 287
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=38.39 E-value=9.9 Score=27.57 Aligned_cols=33 Identities=12% Similarity=0.258 Sum_probs=23.0
Q ss_pred eEEEEEccC---CCCCCchHHHhhhcCCCCeEEEee
Q 025236 34 ATIVWLHGL---SDKGSSWSQLLETLPLPNIKWICP 66 (256)
Q Consensus 34 ~~vl~~HG~---~~~~~~~~~~~~~l~~~g~~vi~~ 66 (256)
..||++|.. ..+......+.+.|.++||.++.+
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl 187 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTI 187 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEH
Confidence 358999942 122345666888888899998876
No 288
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=37.41 E-value=2e+02 Score=23.96 Aligned_cols=97 Identities=18% Similarity=-0.018 Sum_probs=50.5
Q ss_pred cCCCCC-CchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCc---------cccccccCCCCCCCCCCcccHHHHHHHHHH
Q 025236 41 GLSDKG-SSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYP---------CTAWFDVGDLSEDGPDDLEGLDASAAHVAN 110 (256)
Q Consensus 41 G~~~~~-~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (256)
|...++ ..+..+.+.+...|..++.+|.--.+.......- ...|...... ...-+.++.....+..
T Consensus 8 gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~----~dRg~ai~~M~~ga~~ 83 (403)
T PF06792_consen 8 GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSS----GDRGEAIEAMARGAAR 83 (403)
T ss_pred EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhcc----CCHHHHHHHHHHHHHH
Confidence 433343 4566677778889999999997554332221100 0011000000 0111223333333334
Q ss_pred HHhcCCC---CceeEEeEeCchhHHHHHHHHHhh
Q 025236 111 LLSTEPA---DIKLGIGGFSMGAAIALYSATCRI 141 (256)
Q Consensus 111 ~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~ 141 (256)
++...+. -.-|+-+|-|.|..++.......|
T Consensus 84 ~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LP 117 (403)
T PF06792_consen 84 FVSDLYDEGKIDGVIGIGGSGGTALATAAMRALP 117 (403)
T ss_pred HHHHHHhcCCccEEEEecCCccHHHHHHHHHhCC
Confidence 4433332 236778899999999988887653
No 289
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=36.82 E-value=62 Score=25.81 Aligned_cols=18 Identities=33% Similarity=0.265 Sum_probs=15.9
Q ss_pred EEeEeCchhHHHHHHHHH
Q 025236 122 GIGGFSMGAAIALYSATC 139 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~~ 139 (256)
.+.|-|.||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 588999999999998863
No 290
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=36.42 E-value=46 Score=25.89 Aligned_cols=20 Identities=30% Similarity=0.162 Sum_probs=16.2
Q ss_pred ceeEEeEeCchhHHHHHHHH
Q 025236 119 IKLGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~ 138 (256)
.+-.++|||+|=+.|+.++-
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 36789999999998886664
No 291
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=36.27 E-value=55 Score=24.75 Aligned_cols=21 Identities=29% Similarity=0.234 Sum_probs=17.9
Q ss_pred eeEEeEeCchhHHHHHHHHHh
Q 025236 120 KLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.-.+.|-|.|+.++..++...
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCC
Confidence 447999999999999998853
No 292
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=34.61 E-value=18 Score=27.10 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=25.5
Q ss_pred eEEEEEccCC-CCCCchHHHhhhcCCCCeEEEeeC
Q 025236 34 ATIVWLHGLS-DKGSSWSQLLETLPLPNIKWICPT 67 (256)
Q Consensus 34 ~~vl~~HG~~-~~~~~~~~~~~~l~~~g~~vi~~d 67 (256)
..||++|... .+...+..+...|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 4689999743 344456778899999999988763
No 293
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=34.28 E-value=37 Score=26.98 Aligned_cols=19 Identities=32% Similarity=0.287 Sum_probs=15.6
Q ss_pred ceeEEeEeCchhHHHHHHH
Q 025236 119 IKLGIGGFSMGAAIALYSA 137 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a 137 (256)
.+-+++|||+|=+.|+.++
T Consensus 84 ~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 84 KPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp CESEEEESTTHHHHHHHHT
T ss_pred ccceeeccchhhHHHHHHC
Confidence 4778999999999888554
No 294
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=34.07 E-value=56 Score=25.59 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=16.5
Q ss_pred ceeEEeEeCchhHHHHHHHH
Q 025236 119 IKLGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~ 138 (256)
.+..++|||+|=+.|+.++.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCcEEeecCHHHHHHHHHhC
Confidence 47789999999988887653
No 295
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=33.85 E-value=34 Score=24.73 Aligned_cols=19 Identities=32% Similarity=0.216 Sum_probs=16.8
Q ss_pred eEEeEeCchhHHHHHHHHH
Q 025236 121 LGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 121 i~l~G~S~Gg~~a~~~a~~ 139 (256)
=.+.|-|.|+.++..++..
T Consensus 29 d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 29 KRVAGTSAGAITAALLALG 47 (194)
T ss_pred ceEEEECHHHHHHHHHHcC
Confidence 4789999999999998874
No 296
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=32.33 E-value=2.3e+02 Score=21.57 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=30.1
Q ss_pred CceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEeeCCC
Q 025236 32 HQATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICPTAP 69 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~ 69 (256)
..|+||++.|+.+.+. ....+...|-.+|+.|.++..+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 3689999999866554 4666888888899999998554
No 297
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.30 E-value=1.9e+02 Score=24.80 Aligned_cols=92 Identities=7% Similarity=-0.028 Sum_probs=50.5
Q ss_pred ccCCCCCCchHH-HhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhcCCCC
Q 025236 40 HGLSDKGSSWSQ-LLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLSTEPAD 118 (256)
Q Consensus 40 HG~~~~~~~~~~-~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (256)
-|+|.+...... ..++....||.|+.+|..|+.+ +- ...+..+..++....+
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~-----------------------~~---~~lm~~l~k~~~~~~p- 497 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH-----------------------NN---APLMTSLAKLIKVNKP- 497 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc-----------------------CC---hhHHHHHHHHHhcCCC-
Confidence 345544333222 2333447899999999876421 11 1223345555544333
Q ss_pred ceeEEeEeCchhHHHHHHHHHhhhccCCCCCCCccCcceEEE
Q 025236 119 IKLGIGGFSMGAAIALYSATCRILGQYGNGNPYSVNLSAIVG 160 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~v~ 160 (256)
+.|+.+|.-+=|.=++.-+.+..+..... ..|..+.++++
T Consensus 498 d~i~~vgealvg~dsv~q~~~fn~al~~~--~~~r~id~~~l 537 (587)
T KOG0781|consen 498 DLILFVGEALVGNDSVDQLKKFNRALADH--STPRLIDGILL 537 (587)
T ss_pred ceEEEehhhhhCcHHHHHHHHHHHHHhcC--CCccccceEEE
Confidence 48999999888877776665543322211 13556677664
No 298
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=30.37 E-value=2.6e+02 Score=21.61 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=25.1
Q ss_pred CCCEEEeecCCCccc-cchhhHHHHHHHhhcCCcceEEEEeCC
Q 025236 187 SLPILLCHGSGDDVV-AYKHGERSAQTLNSVGFRDLTFRCYNG 228 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~g 228 (256)
+.+++++||..+..+ .......+.+.+.+.|. .+-..-++|
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~-~v~~~Dl~G 67 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGF-PVLRFDYRG 67 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCC-EEEEeCCCC
Confidence 357888898877654 23334567788877665 444444444
No 299
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=30.26 E-value=1.7e+02 Score=19.39 Aligned_cols=74 Identities=16% Similarity=-0.008 Sum_probs=41.1
Q ss_pred EEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCCCCCCCcccCCCccccccccCCCCCCCCCCcccHHHHHHHHHHHHhc
Q 025236 35 TIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTAPTRPVAIFGGYPCTAWFDVGDLSEDGPDDLEGLDASAAHVANLLST 114 (256)
Q Consensus 35 ~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (256)
.||..|| .-+..+...++.+....-.+.++++.. ..+..+..+.+.+.+..
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~---------------------------~~~~~~~~~~i~~~i~~ 53 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP---------------------------GESPDDLLEKIKAALAE 53 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC---------------------------CCCHHHHHHHHHHHHHH
Confidence 6888899 344455666666653333455554431 11233334445554544
Q ss_pred CCCCceeEEeEeCchhHHHHHHH
Q 025236 115 EPADIKLGIGGFSMGAAIALYSA 137 (256)
Q Consensus 115 ~~~~~~i~l~G~S~Gg~~a~~~a 137 (256)
....+.+.++--=+||.......
T Consensus 54 ~~~~~~viil~Dl~GGSp~n~~~ 76 (122)
T cd00006 54 LDSGEGVLILTDLFGGSPNNAAA 76 (122)
T ss_pred hCCCCcEEEEEeCCCCCHHHHHH
Confidence 33345788888777888755433
No 300
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=30.16 E-value=46 Score=23.64 Aligned_cols=20 Identities=35% Similarity=0.204 Sum_probs=17.4
Q ss_pred eeEEeEeCchhHHHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~ 139 (256)
.-.+.|-|.|+.++..++..
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred CCEEEEECHHHHHHHHHHcC
Confidence 45689999999999999885
No 301
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=30.09 E-value=65 Score=24.37 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=27.8
Q ss_pred CceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEeeCCC
Q 025236 32 HQATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICPTAP 69 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~ 69 (256)
..|+||++.|+.+++. ....+...|-.+|+.|.++..+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4679999999887765 3556788888889999998654
No 302
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=29.40 E-value=43 Score=26.18 Aligned_cols=19 Identities=32% Similarity=0.378 Sum_probs=15.7
Q ss_pred eeEEeEeCchhHHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~ 138 (256)
+-.++|||+|-+.|+.++.
T Consensus 83 p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred ccEEEecCHHHHHHHHHhC
Confidence 6689999999999886653
No 303
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=29.18 E-value=2e+02 Score=20.00 Aligned_cols=59 Identities=22% Similarity=0.192 Sum_probs=33.4
Q ss_pred hhcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHh
Q 025236 183 RRAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARL 249 (256)
Q Consensus 183 ~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 249 (256)
......|.|++ |.- ..+.+..+.+.+.++ +++...+-|-..+-.+.......+||...|
T Consensus 86 a~~~~KP~l~i----~~~-~~~~~~~v~~wl~~~---~i~vLNVAGPReS~~PgI~~~~~~~L~~~l 144 (145)
T PF12694_consen 86 ARKHGKPCLHI----DLS-IPEAAAAVAEWLREH---NIRVLNVAGPRESKAPGIYRQVRAFLEALL 144 (145)
T ss_dssp HHHTT--EEEE----TS--HHHHHHHHHHHHHHT---T--EEEEE---TTT-TTHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEE----ecC-cccHHHHHHHHHHHC---CceEEEeccCcccCCCCHHHHHHHHHHHHh
Confidence 34567788888 222 234467888888874 457777777666666666777777777655
No 304
>cd00578 L-fuc_L-ara-isomerases L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins. FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose in glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in various oligo- and polysaccharides in mammals, bacteria and plants. AI catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion to D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=28.72 E-value=3.6e+02 Score=22.82 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=47.3
Q ss_pred CcceEEEeccCCCcchhhhhhccCChHHHhhcCCCCEEEeecCCCc--------cccchhhHHHHHHHhhcCCcceEEEE
Q 025236 154 NLSAIVGLSGWLPCSRTLKSRMEGSREATRRAASLPILLCHGSGDD--------VVAYKHGERSAQTLNSVGFRDLTFRC 225 (256)
Q Consensus 154 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~--------~~~~~~~~~~~~~l~~~~~~~~~~~~ 225 (256)
.+.++|...+.+.....+... .+..+.|+|+.+-...+ .-..-....+...+++.|. +.+++.
T Consensus 63 ~~d~ii~~~~tf~~~~~~~~~--------~~~~~~Pvll~a~~~~~~~~~~~~~~~s~~g~~~~~~~l~r~gi-~~~~v~ 133 (452)
T cd00578 63 NCDGLIVWMHTFGPAKMWIAG--------LSELRKPVLLLATQFNREIPDFMNLNQSACGLREFGNILARLGI-PFKVVY 133 (452)
T ss_pred CCcEEEEcccccccHHHHHHH--------HHhcCCCEEEEeCCCCCCCCchhhhhcchhhhHHHHHHHHHcCC-ceeEEE
Confidence 577877766655544433322 23457788776654321 1222344677777888776 444332
Q ss_pred eCCCCCcCChHHHHHHHHHHHH
Q 025236 226 YNGVGHYTVPEEMDEVRNWLTA 247 (256)
Q Consensus 226 ~~g~~H~~~~~~~~~~~~~l~~ 247 (256)
||...++..+.+.+|++-
T Consensus 134 ----g~~~d~~~~~~i~~~~ra 151 (452)
T cd00578 134 ----GHWKDEDVLRKIESWARA 151 (452)
T ss_pred ----CCCCCHHHHHHHHHHHHH
Confidence 565556677888888863
No 305
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=28.40 E-value=2.1e+02 Score=21.58 Aligned_cols=37 Identities=16% Similarity=-0.004 Sum_probs=19.6
Q ss_pred ceEEEEEccCCCCCCchH----HHhhhcCCCCeEEEeeCCC
Q 025236 33 QATIVWLHGLSDKGSSWS----QLLETLPLPNIKWICPTAP 69 (256)
Q Consensus 33 ~~~vl~~HG~~~~~~~~~----~~~~~l~~~g~~vi~~d~~ 69 (256)
.+.|+.+=|.......-. ...+.+...|+.+-.+|+.
T Consensus 26 ~~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~ 66 (219)
T TIGR02690 26 IPRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPP 66 (219)
T ss_pred CCEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCcc
Confidence 346677777433222212 2333444458888888764
No 306
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=28.25 E-value=67 Score=21.82 Aligned_cols=14 Identities=7% Similarity=0.083 Sum_probs=10.8
Q ss_pred hhhcCCCCeEEEee
Q 025236 53 LETLPLPNIKWICP 66 (256)
Q Consensus 53 ~~~l~~~g~~vi~~ 66 (256)
...|.+.|++|+++
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 35667889999887
No 307
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=28.17 E-value=50 Score=26.25 Aligned_cols=19 Identities=37% Similarity=0.329 Sum_probs=16.5
Q ss_pred eEEeEeCchhHHHHHHHHH
Q 025236 121 LGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 121 i~l~G~S~Gg~~a~~~a~~ 139 (256)
=.++|-|+|+.++..++..
T Consensus 45 d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 45 DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CEEEEECHHHHHHHHHHcC
Confidence 4688999999999998875
No 308
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=28.00 E-value=51 Score=23.48 Aligned_cols=20 Identities=30% Similarity=0.197 Sum_probs=17.1
Q ss_pred eeEEeEeCchhHHHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~ 139 (256)
.=.+.|-|.|+.++..++..
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcC
Confidence 44789999999999988875
No 309
>cd06259 YdcF-like YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.
Probab=27.71 E-value=2e+02 Score=19.59 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=19.7
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCC
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGF 218 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~ 218 (256)
..|.+++.|..-.......+..+.+.+.+.|+
T Consensus 34 ~~~~ii~sGg~~~~~~~~ea~~m~~~l~~~gv 65 (150)
T cd06259 34 PAPKLIVSGGQGPGEGYSEAEAMARYLIELGV 65 (150)
T ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHcCC
Confidence 35666666665444344566677777777666
No 310
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=27.42 E-value=1.7e+02 Score=21.15 Aligned_cols=36 Identities=22% Similarity=0.086 Sum_probs=23.2
Q ss_pred HHHHHHHHhcC-CCCceeEEeEeCchhHHHHHHHHHh
Q 025236 105 AAHVANLLSTE-PADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 105 ~~~l~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
+..+.+++... ...+++.+++.|.|+.-+.....+.
T Consensus 86 lKnaiD~l~~~~~~~Kpv~~~~~s~g~~~~~~a~~~L 122 (184)
T COG0431 86 LKNAIDWLSREALGGKPVLLLGTSGGGAGGLRAQNQL 122 (184)
T ss_pred HHHHHHhCCHhHhCCCcEEEEecCCCchhHHHHHHHH
Confidence 44444554443 4456888999998888777665543
No 311
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=26.87 E-value=2.5e+02 Score=22.70 Aligned_cols=51 Identities=22% Similarity=0.355 Sum_probs=36.5
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHH
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNW 244 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~ 244 (256)
...+++.+.|-.++ +.+.+.+++.|..-.....|++ .|.+..+.++.+.+.
T Consensus 226 ~~~~v~a~sGIg~P-------~~F~~~L~~~G~~~~~~~~f~D-Hh~yt~~dl~~l~~~ 276 (326)
T PF02606_consen 226 KGKPVLAFSGIGNP-------ERFFDTLESLGIEVVGTLAFPD-HHRYTEQDLEKLEAE 276 (326)
T ss_pred cCCeeEEEEEcCCh-------HHHHHHHHHcCCeEEEeeECCC-CCCCCHHHHHHHHHh
Confidence 44566777766654 4788889888884455888996 777888777777664
No 312
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.64 E-value=57 Score=24.25 Aligned_cols=21 Identities=29% Similarity=0.102 Sum_probs=17.7
Q ss_pred eeEEeEeCchhHHHHHHHHHh
Q 025236 120 KLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.=.+.|-|.|+.++..++...
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 346899999999999999854
No 313
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.50 E-value=65 Score=22.75 Aligned_cols=20 Identities=35% Similarity=0.051 Sum_probs=16.4
Q ss_pred eeEEeEeCchhHHHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~ 139 (256)
--.+.|-|.||.+++.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 44689999999999888874
No 314
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=26.43 E-value=56 Score=25.41 Aligned_cols=19 Identities=32% Similarity=0.319 Sum_probs=16.5
Q ss_pred eEEeEeCchhHHHHHHHHH
Q 025236 121 LGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 121 i~l~G~S~Gg~~a~~~a~~ 139 (256)
=.+.|-|+|+.++..+|..
T Consensus 40 d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 40 DAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred cEEEEECHHHHHHHHHHcC
Confidence 3689999999999999874
No 315
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=26.21 E-value=94 Score=26.02 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=22.7
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
....+++++|+.|+....... +.. . ..+..+++||++|.
T Consensus 375 ~~tnviFtNG~~DPW~~lgv~----~~~---~-~~~~~~~I~g~~Hc 413 (434)
T PF05577_consen 375 NATNVIFTNGELDPWRALGVT----SDS---S-DSVPAIVIPGGAHC 413 (434)
T ss_dssp T--SEEEEEETT-CCGGGS------S-S---S-SSEEEEEETT--TT
T ss_pred CCCeEEeeCCCCCCcccccCC----CCC---C-CCcccEEECCCeee
Confidence 346899999999998755411 111 2 25666789999996
No 316
>PTZ00445 p36-lilke protein; Provisional
Probab=25.83 E-value=1.2e+02 Score=22.75 Aligned_cols=24 Identities=17% Similarity=0.148 Sum_probs=19.1
Q ss_pred HHHhhhcCCCCeEEEeeCCCCCCC
Q 025236 50 SQLLETLPLPNIKWICPTAPTRPV 73 (256)
Q Consensus 50 ~~~~~~l~~~g~~vi~~d~~~~~~ 73 (256)
..+.+.|.+.|+.+++.|+...-.
T Consensus 32 ~~~v~~L~~~GIk~Va~D~DnTlI 55 (219)
T PTZ00445 32 DKFVDLLNECGIKVIASDFDLTMI 55 (219)
T ss_pred HHHHHHHHHcCCeEEEecchhhhh
Confidence 347788889999999999986533
No 317
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=25.66 E-value=2e+02 Score=20.34 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=31.4
Q ss_pred CceEEEEEccCCCCCCchH--HHhhhcCCCCeEEEeeCCCCCCCcc
Q 025236 32 HQATIVWLHGLSDKGSSWS--QLLETLPLPNIKWICPTAPTRPVAI 75 (256)
Q Consensus 32 ~~~~vl~~HG~~~~~~~~~--~~~~~l~~~g~~vi~~d~~~~~~~~ 75 (256)
.+..+||+-|..+++..-. .+.+.|..+|-..+..|...--++.
T Consensus 29 qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDGDNvRhGL 74 (207)
T KOG0635|consen 29 QKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDGDNVRHGL 74 (207)
T ss_pred CCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecCccccccc
Confidence 4568999999987765422 3667777889999999876544333
No 318
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=25.14 E-value=75 Score=27.62 Aligned_cols=20 Identities=25% Similarity=-0.016 Sum_probs=16.5
Q ss_pred ceeEEeEeCchhHHHHHHHH
Q 025236 119 IKLGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~ 138 (256)
.+-+++|||+|=+.++..|-
T Consensus 265 ~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 265 KPDFALGYSKGEASMWASLG 284 (538)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 36689999999998887764
No 319
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=25.09 E-value=1e+02 Score=24.36 Aligned_cols=17 Identities=35% Similarity=0.370 Sum_probs=15.3
Q ss_pred EEeEeCchhHHHHHHHH
Q 025236 122 GIGGFSMGAAIALYSAT 138 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~ 138 (256)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999999876
No 320
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=24.90 E-value=53 Score=26.51 Aligned_cols=18 Identities=33% Similarity=0.248 Sum_probs=14.7
Q ss_pred eEEeEeCchhHHHHHHHH
Q 025236 121 LGIGGFSMGAAIALYSAT 138 (256)
Q Consensus 121 i~l~G~S~Gg~~a~~~a~ 138 (256)
-.++|||+|=+.|+.++-
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999998887663
No 321
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=24.59 E-value=69 Score=24.67 Aligned_cols=19 Identities=26% Similarity=0.083 Sum_probs=16.8
Q ss_pred EEeEeCchhHHHHHHHHHh
Q 025236 122 GIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~~~ 140 (256)
.++|-|.|+.++..+++..
T Consensus 30 ~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred EEEEECHHHHhHHHHHhCC
Confidence 6899999999999988853
No 322
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.53 E-value=2e+02 Score=23.14 Aligned_cols=24 Identities=17% Similarity=-0.058 Sum_probs=19.3
Q ss_pred CCCceeEEeEeCchhHHHHHHHHH
Q 025236 116 PADIKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
.+.++|.++|-|+++.++-.+-..
T Consensus 114 ~~a~kvLvvGDslm~gla~gl~~a 137 (354)
T COG2845 114 RDADKVLVVGDSLMQGLAEGLDKA 137 (354)
T ss_pred CCCCEEEEechHHhhhhHHHHHHH
Confidence 445699999999999998876554
No 323
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=24.12 E-value=1.4e+02 Score=26.58 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=27.8
Q ss_pred CCceEEEEEccCCCCCC---chHHHhhhcCCCCeEEEeeCCCCCC
Q 025236 31 KHQATIVWLHGLSDKGS---SWSQLLETLPLPNIKWICPTAPTRP 72 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~~~~ 72 (256)
+.+..+|++||.....- +-..+.+.|...|..|-..-+++.+
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~ 593 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEG 593 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCC
Confidence 45668999999765433 3334777777778777666666543
No 324
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=24.06 E-value=1.8e+02 Score=19.03 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHhh
Q 025236 238 MDEVRNWLTARLE 250 (256)
Q Consensus 238 ~~~~~~~l~~~l~ 250 (256)
.+.+.+++.+.++
T Consensus 78 ~~~i~~~l~~~lg 90 (116)
T PTZ00397 78 AAAITKILASHLK 90 (116)
T ss_pred HHHHHHHHHHHhC
Confidence 3344444444433
No 325
>PRK10834 vancomycin high temperature exclusion protein; Provisional
Probab=24.00 E-value=1.6e+02 Score=22.54 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=34.8
Q ss_pred hcCCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcC
Q 025236 184 RAASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYT 233 (256)
Q Consensus 184 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 233 (256)
+..+.+.+++.|++... .+..++.|.+.+.+.|+ +.+-++.+.++...
T Consensus 78 k~gk~~~ilvSGg~~~~-~~~Ea~~M~~yLi~~GV-p~e~Ii~e~~s~nT 125 (239)
T PRK10834 78 NSGKVNYLLLSGDNALQ-SYNEPMTMRKDLIAAGV-DPSDIVLDYAGFRT 125 (239)
T ss_pred HhCCCCEEEEeCCCCCC-CCCHHHHHHHHHHHcCC-CHHHEEecCCCCCH
Confidence 34556888999987543 56788899999999999 55666666666644
No 326
>PF02698 DUF218: DUF218 domain; InterPro: IPR003848 This domain of unknown function is found in several uncharacterised proteins.; PDB: 3CA8_A.
Probab=23.92 E-value=1.7e+02 Score=20.10 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=14.2
Q ss_pred chhhHHHHHHHhhcCCcceEEEEeCCCCC
Q 025236 203 YKHGERSAQTLNSVGFRDLTFRCYNGVGH 231 (256)
Q Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 231 (256)
.+.+....+.+.+.+. .++.++...-|
T Consensus 83 ~ena~~~~~~~~~~~~--~~iilVT~~~H 109 (155)
T PF02698_consen 83 YENARFSKRLLKERGW--QSIILVTSPYH 109 (155)
T ss_dssp HHHHHHHHHHHHT-SS--S-EEEE--CCC
T ss_pred HHHHHHHHHHHHhhcC--CeEEEECCHHH
Confidence 3666677777766554 35555555566
No 327
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=23.88 E-value=4.5e+02 Score=22.27 Aligned_cols=28 Identities=4% Similarity=0.127 Sum_probs=16.9
Q ss_pred ceEEEEeCC----CCCcCChHHHHHHHHHHHH
Q 025236 220 DLTFRCYNG----VGHYTVPEEMDEVRNWLTA 247 (256)
Q Consensus 220 ~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 247 (256)
.++.+++.+ .|..+..+.++.+++|.++
T Consensus 200 ~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~ 231 (447)
T PLN02607 200 RVRGVLITNPSNPLGATVQRSVLEDILDFVVR 231 (447)
T ss_pred CeeEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 456555543 2334556777777777765
No 328
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=23.80 E-value=75 Score=22.52 Aligned_cols=20 Identities=25% Similarity=0.144 Sum_probs=16.9
Q ss_pred eeEEeEeCchhHHHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~ 139 (256)
.=.+.|-|.|+.++..++..
T Consensus 29 ~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred eeEEEEECHHHHHHHHHHcC
Confidence 34799999999999998864
No 329
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=23.60 E-value=67 Score=28.73 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=28.6
Q ss_pred CCceEEEEEccCCCCC----------CchHHHhhhcCCCCeEEEeeC
Q 025236 31 KHQATIVWLHGLSDKG----------SSWSQLLETLPLPNIKWICPT 67 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~----------~~~~~~~~~l~~~g~~vi~~d 67 (256)
++..+||+.|...... ..|..+.+.|.+.||.++..+
T Consensus 46 ~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~ 92 (672)
T PRK14581 46 KNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVD 92 (672)
T ss_pred CCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHH
Confidence 4567899999986432 247778888888999999886
No 330
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=23.53 E-value=27 Score=25.14 Aligned_cols=39 Identities=13% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCceEEEEEccCCCC------------CCchHH-HhhhcCCCCeEEEeeCCC
Q 025236 31 KHQATIVWLHGLSDK------------GSSWSQ-LLETLPLPNIKWICPTAP 69 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~------------~~~~~~-~~~~l~~~g~~vi~~d~~ 69 (256)
+...+||++||.|.- ...... +++...+.||.|+.++..
T Consensus 97 ~~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~ 148 (178)
T PF09757_consen 97 TAKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPN 148 (178)
T ss_dssp ----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 566799999996651 001112 444445678888877654
No 331
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=23.18 E-value=88 Score=22.05 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=18.8
Q ss_pred cccHHHHH----HHHHHHHhcCCCCceeEEeEeCchhH
Q 025236 98 LEGLDASA----AHVANLLSTEPADIKLGIGGFSMGAA 131 (256)
Q Consensus 98 ~~~~~~~~----~~l~~~~~~~~~~~~i~l~G~S~Gg~ 131 (256)
.+.+...+ ..+.+.......+++|.|+|.|++..
T Consensus 79 a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 79 ADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 45566666 33333333333456999999999987
No 332
>PRK10279 hypothetical protein; Provisional
Probab=23.08 E-value=1.6e+02 Score=23.35 Aligned_cols=20 Identities=20% Similarity=0.119 Sum_probs=17.0
Q ss_pred eeEEeEeCchhHHHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a~~ 139 (256)
.-.+.|-|+|+.++..+|..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcC
Confidence 45789999999999998863
No 333
>PRK10673 acyl-CoA esterase; Provisional
Probab=22.97 E-value=3.2e+02 Score=20.29 Aligned_cols=40 Identities=23% Similarity=0.125 Sum_probs=23.4
Q ss_pred CCCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCc
Q 025236 186 ASLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHY 232 (256)
Q Consensus 186 ~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 232 (256)
.+.|++++||-.+.... -..+...+.+ ..+++.++--||.
T Consensus 15 ~~~~iv~lhG~~~~~~~---~~~~~~~l~~----~~~vi~~D~~G~G 54 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDN---LGVLARDLVN----DHDIIQVDMRNHG 54 (255)
T ss_pred CCCCEEEECCCCCchhH---HHHHHHHHhh----CCeEEEECCCCCC
Confidence 46789999997665422 2344555543 4555555544554
No 334
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=22.92 E-value=4.2e+02 Score=22.09 Aligned_cols=34 Identities=6% Similarity=-0.019 Sum_probs=17.8
Q ss_pred EEEEEccCCCCCCchHHHhhhcCCCCeEEEeeCC
Q 025236 35 TIVWLHGLSDKGSSWSQLLETLPLPNIKWICPTA 68 (256)
Q Consensus 35 ~vl~~HG~~~~~~~~~~~~~~l~~~g~~vi~~d~ 68 (256)
.|++.--+|.+...-..+++.+.+.|..|...++
T Consensus 250 ~l~Y~smyg~T~~ma~aiaegl~~~gv~v~~~~~ 283 (388)
T COG0426 250 DLIYDSMYGNTEKMAQAIAEGLMKEGVDVEVINL 283 (388)
T ss_pred EEEEecccCCHHHHHHHHHHHhhhcCCceEEEEc
Confidence 3444434444444444456666666666666654
No 335
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=22.63 E-value=1.7e+02 Score=17.79 Aligned_cols=31 Identities=6% Similarity=0.080 Sum_probs=23.2
Q ss_pred cCCCCEEEeecCCCccccchhhHHHHHHHhh
Q 025236 185 AASLPILLCHGSGDDVVAYKHGERSAQTLNS 215 (256)
Q Consensus 185 ~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~ 215 (256)
...+|++++++.+...++..-.+.+.+.+++
T Consensus 36 ~~~PPtFv~f~N~~~~~~~sY~ryL~n~lRe 66 (80)
T PF14714_consen 36 GTRPPTFVLFVNDPELLPESYKRYLENQLRE 66 (80)
T ss_dssp ETTTTEEEEEES-CCC--HHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 4578999999999888888888888888775
No 336
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=22.58 E-value=1.6e+02 Score=21.01 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=28.5
Q ss_pred CEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeC
Q 025236 189 PILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYN 227 (256)
Q Consensus 189 p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 227 (256)
.+||+.++.|... -+.++.+...|++.|. ++++.-..
T Consensus 2 k~LIlYstr~GqT-~kIA~~iA~~L~e~g~-qvdi~dl~ 38 (175)
T COG4635 2 KTLILYSTRDGQT-RKIAEYIASHLRESGI-QVDIQDLH 38 (175)
T ss_pred ceEEEEecCCCcH-HHHHHHHHHHhhhcCC-eeeeeehh
Confidence 5899999999886 3677889999998776 66665443
No 337
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.30 E-value=75 Score=24.90 Aligned_cols=18 Identities=39% Similarity=0.241 Sum_probs=16.1
Q ss_pred EEeEeCchhHHHHHHHHH
Q 025236 122 GIGGFSMGAAIALYSATC 139 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~~ 139 (256)
.+.|-|.||.+++.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 688999999999999874
No 338
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.17 E-value=75 Score=23.80 Aligned_cols=19 Identities=32% Similarity=0.261 Sum_probs=16.6
Q ss_pred eEEeEeCchhHHHHHHHHH
Q 025236 121 LGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 121 i~l~G~S~Gg~~a~~~a~~ 139 (256)
-.+.|-|.|+.++..++..
T Consensus 30 ~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 30 SAISGTSAGALVGGLFASG 48 (221)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 3699999999999999874
No 339
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=22.16 E-value=1.7e+02 Score=23.84 Aligned_cols=21 Identities=29% Similarity=0.143 Sum_probs=18.7
Q ss_pred ceeEEeEeCchhHHHHHHHHH
Q 025236 119 IKLGIGGFSMGAAIALYSATC 139 (256)
Q Consensus 119 ~~i~l~G~S~Gg~~a~~~a~~ 139 (256)
.+++++|-|-||-.|+.....
T Consensus 157 ~~iV~IGaStGGp~AL~~il~ 177 (350)
T COG2201 157 RKIVAIGASTGGPAALRAVLP 177 (350)
T ss_pred ccEEEEEeCCCCHHHHHHHHH
Confidence 479999999999999998775
No 340
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=21.60 E-value=5.3e+02 Score=22.26 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=15.7
Q ss_pred ceEEEEeCC----CCCcCChHHHHHHHHHHHH
Q 025236 220 DLTFRCYNG----VGHYTVPEEMDEVRNWLTA 247 (256)
Q Consensus 220 ~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 247 (256)
+++.+++.+ .|..+..+.++.+++|.++
T Consensus 199 ~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~ 230 (496)
T PLN02376 199 KVKGLILTNPSNPLGTMLDKDTLTNLVRFVTR 230 (496)
T ss_pred CeeEEEEcCCCCCCCccCCHHHHHHHHHHHHH
Confidence 345555543 2334456667777777754
No 341
>PF10137 TIR-like: Predicted nucleotide-binding protein containing TIR-like domain; InterPro: IPR019302 This entry represents a TIR-like domain found in a family of prokaryotic predicted nucleotide-binding proteins. Their exact function has not, as yet, been defined.
Probab=21.50 E-value=2.3e+02 Score=19.10 Aligned_cols=8 Identities=25% Similarity=0.850 Sum_probs=5.0
Q ss_pred EEEeecCC
Q 025236 190 ILLCHGSG 197 (256)
Q Consensus 190 ~l~~~G~~ 197 (256)
++|+||.+
T Consensus 2 VFIvhg~~ 9 (125)
T PF10137_consen 2 VFIVHGRD 9 (125)
T ss_pred EEEEeCCC
Confidence 56777733
No 342
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=21.45 E-value=1.6e+02 Score=24.70 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=22.3
Q ss_pred HHHHHHHhcCCCCceeEEeEeCchhHHHHHHHHHh
Q 025236 106 AHVANLLSTEPADIKLGIGGFSMGAAIALYSATCR 140 (256)
Q Consensus 106 ~~l~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 140 (256)
.-+..+...... +=++.|-|.|+.+|..++...
T Consensus 90 GVLkaL~E~gl~--p~vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 90 GVLKALFEANLL--PRIISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCC
Confidence 344444444433 236999999999999888754
No 343
>PLN02216 protein SRG1
Probab=21.34 E-value=3.3e+02 Score=22.25 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=34.7
Q ss_pred CCCEEEeecCCCccccchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHHHHHHHHHHHHHhhh
Q 025236 187 SLPILLCHGSGDDVVAYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEEMDEVRNWLTARLEL 251 (256)
Q Consensus 187 ~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 251 (256)
.+|++=+..-.+..-..+.++++.+++++.|. ..+ .+|.+..+.++.+.+..++.+..
T Consensus 52 ~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GF--F~v-----~nHGI~~~li~~~~~~~~~FF~L 109 (357)
T PLN02216 52 EIPIIDMKRLCSSTAMDSEVEKLDFACKEWGF--FQL-----VNHGIDSSFLDKVKSEIQDFFNL 109 (357)
T ss_pred CCCeEEChhccCCccHHHHHHHHHHHHHHCcE--EEE-----ECCCCCHHHHHHHHHHHHHHHcC
Confidence 46777665433221112345677778877664 333 37998888777777776666543
No 344
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.20 E-value=81 Score=25.58 Aligned_cols=17 Identities=41% Similarity=0.421 Sum_probs=15.4
Q ss_pred EEeEeCchhHHHHHHHH
Q 025236 122 GIGGFSMGAAIALYSAT 138 (256)
Q Consensus 122 ~l~G~S~Gg~~a~~~a~ 138 (256)
.+.|-|.||.+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 68899999999999886
No 345
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=21.06 E-value=2e+02 Score=20.04 Aligned_cols=18 Identities=28% Similarity=0.056 Sum_probs=15.6
Q ss_pred eeEEeEeCchhHHHHHHH
Q 025236 120 KLGIGGFSMGAAIALYSA 137 (256)
Q Consensus 120 ~i~l~G~S~Gg~~a~~~a 137 (256)
--.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 457889999999999887
No 346
>cd05397 NT_Pol-beta-like Nucleotidyltransferase (NT) domain of DNA polymerase beta and similar proteins. This superfamily includes the NT domains of DNA polymerase beta and other family X DNA polymerases, as well as the NT domains of Class I and Class II CCA-adding enzymes, RelA- and SpoT-like ppGpp synthetases and hydrolases, 2'5'-oligoadenylate (2-5A)synthetases, Escherichia coli adenylyltransferase (GlnE), Escherichia coli uridylyl transferase (GlnD), poly (A) polymerases, terminal uridylyl transferases, and Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. The Escherichia coli CCA-adding enzyme belongs to this superfamily but is not included as this enzyme lacks the N-terminal helix conserved in the remainder of the superfamily. In the majority of the Pol beta-like superfamily NTs, two carboxylates, Dx[D/E], together with a third more distal carboxylate coordinate two divalent metal cations that are essential for catalysis. These divalent metal ions are
Probab=20.97 E-value=1.5e+02 Score=15.84 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=11.7
Q ss_pred HHHHHHHHhcCCCCceeEEeE
Q 025236 105 AAHVANLLSTEPADIKLGIGG 125 (256)
Q Consensus 105 ~~~l~~~~~~~~~~~~i~l~G 125 (256)
++.+.+.+.+..+..+++++|
T Consensus 4 l~~i~~~l~~~~~~~~v~lfG 24 (49)
T cd05397 4 LDIIKERLKKLVPGYEIVVYG 24 (49)
T ss_pred HHHHHHHHHhhcCCcEEEEEC
Confidence 334445555444455777776
No 347
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=20.91 E-value=48 Score=26.78 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=16.4
Q ss_pred hHHHhhcCCCCEEEeecCCCc
Q 025236 179 REATRRAASLPILLCHGSGDD 199 (256)
Q Consensus 179 ~~~~~~~~~~p~l~~~G~~D~ 199 (256)
++...+.+++|+++++...|.
T Consensus 261 pq~v~~~irtP~F~vN~afD~ 281 (402)
T KOG4287|consen 261 PQYVLKTIRTPVFLVNAAFDS 281 (402)
T ss_pred hHHHHhhcCCceEehhhhhhH
Confidence 344667789999999888875
No 348
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=20.91 E-value=8.6e+02 Score=24.42 Aligned_cols=58 Identities=17% Similarity=0.079 Sum_probs=31.1
Q ss_pred EEeecCCCccc---cchhhHHHHHHHhhcCCcceEEEEeCCCCCcCChHH----HHHHHHHHHHHhhh
Q 025236 191 LLCHGSGDDVV---AYKHGERSAQTLNSVGFRDLTFRCYNGVGHYTVPEE----MDEVRNWLTARLEL 251 (256)
Q Consensus 191 l~~~G~~D~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~~ 251 (256)
-.+|-.+|... |.+....+.+.|++.|+ --.++...|-.|+... ...+.+-+++.+..
T Consensus 649 paCHNs~D~~TiSGp~a~v~~~v~qL~~~gv---Fak~V~t~G~aFHS~~m~a~~p~l~~~l~k~i~e 713 (2376)
T KOG1202|consen 649 PACHNSKDNVTISGPQASVFAFVEQLRAEGV---FAKEVRTGGYAFHSPYMEAAAPPLRQSLEKVIPE 713 (2376)
T ss_pred ccccCCCCceEecCChHHHHHHHHHhhhcCe---eeeEecCCCccccCHHHHhhChHHHHHHHHhcCC
Confidence 35667777643 34566789999998665 2233333344344322 23444444444443
No 349
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=20.88 E-value=2.7e+02 Score=22.59 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=29.2
Q ss_pred CCceEEEEEccCCCCCC--chHHHhhhcCCCCeEEEee
Q 025236 31 KHQATIVWLHGLSDKGS--SWSQLLETLPLPNIKWICP 66 (256)
Q Consensus 31 ~~~~~vl~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~ 66 (256)
+++|.|+++=|..+.+. ....++.+|...|+.|+..
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vlla 173 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLA 173 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEE
Confidence 45689999999766654 5778999999999999987
No 350
>KOG4150 consensus Predicted ATP-dependent RNA helicase [RNA processing and modification]
Probab=20.32 E-value=4.7e+02 Score=23.26 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=40.1
Q ss_pred cCCCCEEEeecCCCccccchhhH-HHHHHHhhcCCcceEEEEeCCCCCcC----ChHHHHHHHHHHHHHhh
Q 025236 185 AASLPILLCHGSGDDVVAYKHGE-RSAQTLNSVGFRDLTFRCYNGVGHYT----VPEEMDEVRNWLTARLE 250 (256)
Q Consensus 185 ~~~~p~l~~~G~~D~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~g~~H~~----~~~~~~~~~~~l~~~l~ 250 (256)
..-.|++|.++.+|-..-....+ ++.++-.+.. .+.+++.|+.+|-.. -+..++.+-+.|...+.
T Consensus 896 ~~~~P~FI~~~~~dI~TECKApEKEfaErqt~R~-RPaRLIFYD~~G~~~GaGLC~KAfEH~Dd~Ie~~lr 965 (1034)
T KOG4150|consen 896 VNVVPTFITCNYSDIATECKAPEKEFAERQTQRY-RPARLIFYDPGGTGIGAGLCPKAFEHLDDAIEDLLR 965 (1034)
T ss_pred HhhcceEEecCchhhcccCCCchHHHHHhhhhcc-CcceEEEEcCCCCcccccccHHHHHHHHHHHHHHHH
Confidence 34579999999999877655443 4544443333 378999998766543 24444444444444433
No 351
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=20.32 E-value=99 Score=22.36 Aligned_cols=28 Identities=7% Similarity=0.030 Sum_probs=17.6
Q ss_pred cccHHHHHHHHHHHHhcCCCCceeEEeE
Q 025236 98 LEGLDASAAHVANLLSTEPADIKLGIGG 125 (256)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~i~l~G 125 (256)
.+.+.+.+..+.+.+.+..+..+|+++-
T Consensus 73 ~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 73 PEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp TTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 4456777777777777766666777774
Done!