BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025241
(255 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 259 bits (663), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
Query: 32 VEDLIFSLTGCFDHHCPPKLRYTFNDLVRLANNSPFTINEVEALYELFKELSSSLIDDGL 91
++ L S+ GCFD K D LA ++ F+++E+EALYELFK++SS++IDDGL
Sbjct: 8 IKHLCTSVLGCFDLDLY-KQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGL 66
Query: 92 IHKEELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDF 151
I+KEE +LAL KT E+LF DRVFDLFD K NG++ FEEF RALS+FHP+ P++DKI F
Sbjct: 67 INKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
+F+LYDL++ G IE ++V+QMVVATL ESGM+L D ++ IIDKTF +AD DGKI++E
Sbjct: 127 SFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKE 186
Query: 212 EWKSFALSHPTLLKNMTLPFLKDMTTVFPSFIFNTGVDDT 251
EW+S L HP+LLKNMTL +LKD+TT FPSF+F++ V+DT
Sbjct: 187 EWRSLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVEDT 226
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 250 bits (639), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 116/185 (62%), Positives = 154/185 (83%)
Query: 61 LANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFD 120
LA ++ F+++E+EALYELFK++SS++IDDGLI+KEE +LAL KT E+LF DRVFDLFD
Sbjct: 5 LARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD 64
Query: 121 EKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQES 180
K NG++ FEEF RALS+FHP+ P++DKI F+F+LYDL++ G IE ++V+QMVVATL ES
Sbjct: 65 TKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAES 124
Query: 181 GMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTLPFLKDMTTVFP 240
GM+L D ++ IIDKTF +AD DGKI++EEW+S L HP+LLKNMTL +LKD+TT FP
Sbjct: 125 GMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFP 184
Query: 241 SFIFN 245
SF+F+
Sbjct: 185 SFVFH 189
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 234 bits (598), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 151/194 (77%)
Query: 61 LANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFD 120
LA+ +PFT+ EVEALYELFK+LSSS+IDDGLIHKEE +LAL + + NLF DR+FD+FD
Sbjct: 25 LASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD 84
Query: 121 EKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQES 180
K+NGVIEF EFVR+L +FHPS P+ +K+ FAF+LYDLR+TG IE E++++MVVA L ES
Sbjct: 85 VKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 181 GMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTLPFLKDMTTVFP 240
+ LS++ ++ ++DK F AD DGKI+ +EWK F +P+L+KNMTLP+LKD+ FP
Sbjct: 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFP 204
Query: 241 SFIFNTGVDDTEFE 254
SF+ + ++ E +
Sbjct: 205 SFVSSCEEEEMELQ 218
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 234 bits (597), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 146/183 (79%)
Query: 61 LANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFD 120
LA+ +PFT+ EVEALYELFK+LSSS+IDDGLIHKEE +LAL + + NLF DR+FD+FD
Sbjct: 25 LASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD 84
Query: 121 EKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQES 180
K+NGVIEF EFVR+L +FHPS P+ +K+ FAF+LYDLR+TG IE E++++MVVA L ES
Sbjct: 85 VKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 181 GMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTLPFLKDMTTVFP 240
+ LS++ ++ ++DK F AD DGKI+ +EWK F +P+L+KNMTLP+LKD+ FP
Sbjct: 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFP 204
Query: 241 SFI 243
SF+
Sbjct: 205 SFV 207
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 65 SPFTINEVEALYELFKELSSSLIDDGLIHKEE-LRLALLKTTSGENLFLDRVFDLFDEKK 123
S F +E++ L + FK+L L + G + EE + L L+ +N + RV D+FD
Sbjct: 12 SHFDADEIKRLGKRFKKLD--LDNSGSLSVEEFMSLPELQ----QNPLVQRVIDIFDTDG 65
Query: 124 NGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCI---EPEQVRQMVVATLQES 180
NG ++F+EF+ +S F E K+ FAFR+YD+ + G I E QV +M+V
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV------ 119
Query: 181 GMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G +L D L+ I+DKT +AD DGDG+I+ EE+
Sbjct: 120 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 65 SPFTINEVEALYELFKELSSSLIDDGLIHKEE-LRLALLKTTSGENLFLDRVFDLFDEKK 123
S F +E++ L + FK+L L + G + EE + L L+ +N + RV D+FD
Sbjct: 13 SHFDADEIKRLGKRFKKLD--LDNSGSLSVEEFMSLPELQ----QNPLVQRVIDIFDTDG 66
Query: 124 NGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCI---EPEQVRQMVVATLQES 180
NG ++F+EF+ +S F E K+ FAFR+YD+ + G I E QV +M+V
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV------ 120
Query: 181 GMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G +L D L+ I+DKT +AD DGDG+I+ EE+
Sbjct: 121 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 16/148 (10%)
Query: 70 NEVEALYELFKELSSSLIDDGLIHKEE-LRLALLKTTSGENLFLDRVFDLFDEKKNGVIE 128
+E++ L + FK+L L + G + EE + L L+ +N + RV D+FD NG ++
Sbjct: 4 DEIKRLGKRFKKLD--LDNSGSLSVEEFMSLPELQ----QNPLVQRVIDIFDTDGNGEVD 57
Query: 129 FEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCI---EPEQVRQMVVATLQESGMHLS 185
F+EF+ +S F E K+ FAFR+YD+ + G I E QV +M+V G +L
Sbjct: 58 FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV------GNNLK 111
Query: 186 DESLKAIIDKTFADADADGDGKINREEW 213
D L+ I+DKT +AD DGDG+I+ EE+
Sbjct: 112 DTQLQQIVDKTIINADKDGDGRISFEEF 139
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 16/148 (10%)
Query: 70 NEVEALYELFKELSSSLIDDGLIHKEE-LRLALLKTTSGENLFLDRVFDLFDEKKNGVIE 128
+E++ L + FK+L L + G + EE + L L+ +N + RV D+FD NG ++
Sbjct: 3 DEIKRLGKRFKKLD--LDNSGSLSVEEFMSLPELQ----QNPLVQRVIDIFDTDGNGEVD 56
Query: 129 FEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCI---EPEQVRQMVVATLQESGMHLS 185
F+EF+ +S F E K+ FAFR+YD+ + G I E QV +M+V G +L
Sbjct: 57 FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV------GNNLK 110
Query: 186 DESLKAIIDKTFADADADGDGKINREEW 213
D L+ I+DKT +AD DGDG+I+ EE+
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEF 138
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 9/174 (5%)
Query: 61 LANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLF 119
L + FT EV+ Y+ F K+ S +D K + + F VF++F
Sbjct: 16 LTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTK---FATFVFNVF 72
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
DE K+G IEF EF++ALS+ T L++K+ +AF+LYDL G I ++ +V A Q
Sbjct: 73 DENKDGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 180 SG--MHLSDE--SLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTL 229
G + L +E + + +D+ FA D + DGK+ +E++ + + P++++ ++L
Sbjct: 132 VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 56 NDLVRLANNSPFTINEVEALYE-LFKELSSSLIDDGLIHKEELRLALLK--TTSGENLFL 112
DLVR ++ F E++ Y+ FK+ S G ++K E + + + F
Sbjct: 14 QDLVR---STRFDKKELQQWYKGFFKDCPS-----GHLNKSEFQKIYKQFFPFGDPSAFA 65
Query: 113 DRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQM 172
+ VF++FD KNG I+F+EF+ ALS+ L DK+ +AF+LYDL G I +++ ++
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRI 124
Query: 173 VVATLQESGMHLS----DESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMT 228
V A + G + +++ + ++K F D + DG++ EE+ + PT++ ++
Sbjct: 125 VDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALS 184
Query: 229 L 229
L
Sbjct: 185 L 185
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 51 LRYTFNDLVRLANNSPFTINEVEALYELFK-ELSSSLIDDGLIHKEELRLALLKTTSGEN 109
+R+ L +L + FT E+++LY FK E + L+D+ +L +
Sbjct: 72 VRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTF---KLIYSQFFPQGDAT 128
Query: 110 LFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQV 169
+ +F+ FD NG I FE+FV LSI T + +K+ +AF LYD+ + GCI E++
Sbjct: 129 TYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEEM 187
Query: 170 RQMVVATLQESGMH----LSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLK 225
++ + G H L +++ +++ F D + DG + +E+ ++
Sbjct: 188 LAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMN 247
Query: 226 NMTL 229
+M L
Sbjct: 248 SMQL 251
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 26/199 (13%)
Query: 57 DLVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEEL-RLALLKTTSGENLFLDRV 115
+L + + F+ +++ LY F L ++G + +E+ R+ L N DR+
Sbjct: 13 ELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI----NPLGDRI 66
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHP------------STPLE---DKIDFAFRLYDLRE 160
+ F + + F F+R L+ F P PL +K+ FAFRLYDL +
Sbjct: 67 INAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDK 126
Query: 161 TGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSH 220
I +++ Q++ + G+++SDE L +I D+T +AD DGD I+ E+ L
Sbjct: 127 DDKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK-VLEK 182
Query: 221 PTLLKNMTLPFLKDMTTVF 239
+ + M++ FL +
Sbjct: 183 VDVEQKMSIRFLHKLAAAL 201
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 LVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELR--LALLKTTSGENLFLDRV 115
L +L + FT E++ LY FK S G++++E + A + + +
Sbjct: 39 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDASTYAHYL 94
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
F+ FD + G ++FE+FV ALSI T + +K+ + F LYD+ + G I E++ +V A
Sbjct: 95 FNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
Query: 176 TLQESGMH----LSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTL 229
G + L +++ + +D F D + DG + +E+ +++++ L
Sbjct: 154 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 211
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 58 LVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELR--LALLKTTSGENLFLDRV 115
L +L + FT E++ LY FK S G+++++ + A + + +
Sbjct: 3 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
F+ FD + G ++FE+FV ALSI T + +K+ + F LYD+ + G I E++ +V A
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 176 TLQESGMH----LSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTL 229
G + L++++ + +D F D + DG + +E+ +++++ L
Sbjct: 118 IYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVR 170
F + +F +FD+ NG I FEEF+ LS T LE+K+ +AF LYDL G I +++
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGT-LEEKLSWAFELYDLNHDGYITFDEML 122
Query: 171 QMVVATLQESGMHLS---DESLKAI-IDKTFADADADGDGKINREEWKSFALSHPTLLKN 226
+V + + G ++ DE+ + + K F D + DG I +E++ + P+++
Sbjct: 123 TIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGA 182
Query: 227 MTL 229
+ L
Sbjct: 183 LNL 185
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVR 170
F + VF FD +G I+F EF+ ALS+ LE K+ +AF +YDL G I ++
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEML 122
Query: 171 QMVVATLQ--ESGMHL-SDESL-KAIIDKTFADADADGDGKINREEWKSFALSHPTLLK 225
++V A + S M + DES + +K F D + DGK++ EE+ A S P++++
Sbjct: 123 EIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 58 LVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELR--LALLKTTSGENLFLDRV 115
L +L + FT E++ LY FK S G++++E + A + + +
Sbjct: 6 LEQLEAQTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDASTYAHYL 61
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
F+ FD + G ++FE+FV ALSI T + +K+ + F LYD+ + G I E++ +V A
Sbjct: 62 FNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 176 TLQESGMH----LSDESLKAIIDKTFADADADGDGKINREEW 213
G + L +++ + +D F D + DG + +E+
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 58 LVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELR--LALLKTTSGENLFLDRV 115
L +L + FT E++ LY FK S G+++++ + A + + +
Sbjct: 3 LEQLEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYL 58
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
F+ FD + G ++FE+FV ALSI T + +K+ + F LYD+ + G I E++ +V A
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 176 TLQESGMH----LSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLLKNMTL 229
G + L +++ + +D F D + DG + +E+ +++++ L
Sbjct: 118 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 57 DLVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEEL-RLALLKTTSGENLFLDRV 115
+L + + F+ +++ LY F L ++G + +E+ R+ L N DR+
Sbjct: 13 ELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI----NPLGDRI 66
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHP------------STPLE---DKIDFAFRLYDLRE 160
+ F + + F F+R L+ F P PL +K+ FAFRLYDL +
Sbjct: 67 INAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDK 126
Query: 161 TGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSH 220
I +++ Q++ + G+++SDE L +I D+T +AD DGD I+ E+ L
Sbjct: 127 DEKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK-VLEK 182
Query: 221 PTLLKNMTLPFL 232
+ + M++ FL
Sbjct: 183 VDVEQKMSIRFL 194
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 51 LRYTFNDLVRLANNSPFTINEVEALYELFKELSSSLIDDGLIHKEELR--LALLKTTSGE 108
+R+ L L S FT E++ LY FK S G++++E + +
Sbjct: 45 VRHRPEALELLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFFPQGDS 100
Query: 109 NLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQ 168
+ +F+ FD NG + FE+F++ LSI T +++K+++AF LYD+ + G I E+
Sbjct: 101 TTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGT-VQEKLNWAFNLYDINKDGYITKEE 159
Query: 169 VRQMVVATLQESGMH----LSDESLKAIIDKTFADADADGDGKINREEWKSFALSHPTLL 224
+ ++ A G L +++ + ++ F D + DG + +E+ ++
Sbjct: 160 MLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 219
Query: 225 KNMTL 229
++M L
Sbjct: 220 RSMQL 224
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
D+ +G I+FEEF++ ++ ++I AFRL+D ETG I + ++++ +E
Sbjct: 54 DKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVA----KE 109
Query: 180 SGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G +++DE L+ +ID +AD DGDG++N EE+
Sbjct: 110 LGENMTDEELQEMID----EADRDGDGEVNEEEF 139
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 109 NLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQ 168
N +++++F+ FD K+G I+F E+V ALS+ ++ K+ + F+LYD+ GCI+ +
Sbjct: 51 NKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKG-KVDQKLRWYFKLYDVDGNGCIDRGE 109
Query: 169 VRQMVVATLQESGMHLSDESLKA--IIDKTFADADADGDGKINREEWKSFALSHPTLLKN 226
+ ++ A ++ +E++ A + F D +GDG+++ EE+ LL
Sbjct: 110 LLNIIKAI---RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDI 166
Query: 227 MT 228
+T
Sbjct: 167 LT 168
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 89 DGLIHKEELRLAL--LKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
DG I EEL + L E D + ++ D NG IEF+EF+ ++ T E
Sbjct: 24 DGCITVEELATVIRSLDQNPTEEELQDMISEV-DADGNGTIEFDEFLSLMAKKVKDTDAE 82
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
+++ AF+++D + G I ++R +++ G L+DE ++ +I +AD DGDG
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMI----KEADLDGDG 134
Query: 207 KINREEWKSFALS 219
++N EE+ ++
Sbjct: 135 QVNYEEFVKMMMT 147
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 149 IDF--AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
+DF AF L+D GCI E++ ++ + Q + ++E L+ +I ++ DADG+G
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQ----NPTEEELQDMI----SEVDADGNG 61
Query: 207 KINREEWKSF 216
I +E+ S
Sbjct: 62 TIEFDEFLSL 71
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 92 IHKEELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDF 151
+H+ + L L N +D+V++ FD K+G ++F EF+ A+++ +E K+ +
Sbjct: 39 LHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE-KMEQKLKW 97
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMH-LSDESLKAIIDKTFADADADGDGKINR 210
F+LYD G I+ ++ M +A +G LS E I+ F D + DG++
Sbjct: 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEF---INLVFHKIDINNDGELTL 154
Query: 211 EEW 213
EE+
Sbjct: 155 EEF 157
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 109 NLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHP-------------STPL---EDKIDFA 152
N DR+ + F + ++F FVR L+ F P PL +K+ +A
Sbjct: 60 NPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYA 119
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
F+LYDL G I ++ Q++ + G+ +++E L+ I D+T +AD DGDG ++ E
Sbjct: 120 FQLYDLDRDGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176
Query: 213 WKSFALSHPTLLKNMTLPFLK 233
+ + +L + + M++ LK
Sbjct: 177 F-TKSLEKMDVEQKMSIRILK 196
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ + T
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDS 382
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 434
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 435 GQVNYEEF 442
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGCITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AFR++D + G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADVDGD 134
Query: 206 GKINREEW 213
G+IN EE+
Sbjct: 135 GQINYEEF 142
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 326 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 384 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 435
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 436 GQVNYEEF 443
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 382
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 434
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 435 GQVNYEEF 442
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+K+ AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEKLKEAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADVDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 382
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 434
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 435 GQVNYEEF 442
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 291 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 348
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R ++ G L+DE +D+ +AD DGD
Sbjct: 349 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEE----VDEMIREADIDGD 400
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 401 GQVNYEEF 408
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 291 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 348
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R ++ G L+DE +D+ +AD DGD
Sbjct: 349 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEE----VDEMIREADIDGD 400
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 401 GQVNYEEF 408
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 288 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 345
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R ++ G L+DE +D+ +AD DGD
Sbjct: 346 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEE----VDEMIREADIDGD 397
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 398 GQVNYEEF 405
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDS 382
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 434
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 435 GQVNYEEF 442
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDQMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGCITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AFR++D + G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADVDGD 134
Query: 206 GKINREEW 213
G+IN +E+
Sbjct: 135 GQINYDEF 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 22 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 79
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 131
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 132 GQVNYEEF 139
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 26 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 83
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 84 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 135
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 136 GQVNYEEF 143
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 28 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 85
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 86 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 137
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 138 GQVNYEEF 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 21 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 78
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 79 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 130
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 131 GQVNYEEF 138
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 22 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 79
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 131
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 132 GQVNYEEF 139
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEWKSFALSH 220
G++N EE+ + S
Sbjct: 135 GQVNYEEFVTMMTSK 149
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKEL--GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 22 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 79
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 131
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 132 GQVNYEEF 139
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 133
Query: 206 GKINREEWKSFALSH 220
G++N EE+ + S
Sbjct: 134 GQVNYEEFVTMMTSK 148
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 23 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 80
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 81 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 132
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 133 GQVNYEEF 140
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 20 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 77
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 78 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 129
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 130 GQVNYEEF 137
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 30 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 87
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 88 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 139
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 140 GQVNYEEF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEXLTDEE----VDEMIREADIDGD 134
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 135 GQVNYEEF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEXLTDEE----VDEMIREADIDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 21 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 78
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 79 EEELKEAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADVDGD 130
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 131 GQVNYEEF 138
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEELKEAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADVDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLID---DGLIHKEELRLALLKTTSGENLFLDRVF 116
+L N P + E E + E FKE + SL D DG I +EL + + G+N +
Sbjct: 295 KLEYNLPDQLTE-EQIAE-FKE-AFSLFDKDGDGTITTKELGTVM--RSLGQNPTEAELQ 349
Query: 117 DLFDE---KKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMV 173
D+ +E +G I+F EF+ ++ T E++I AFR++D G I ++R V
Sbjct: 350 DMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH-V 408
Query: 174 VATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
+ L E L+DE +D+ +AD DGDG++N EE+
Sbjct: 409 MTNLGEK---LTDEE----VDEMIREADIDGDGQVNYEEF 441
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLID---DGLIHKEELRLALLKTTSGENLFLDRVF 116
+L N P + E E + E FKE + SL D DG I +EL + + G+N +
Sbjct: 295 KLEYNLPDQLTE-EQIAE-FKE-AFSLFDKDGDGTITTKELGTVM--RSLGQNPTEAELQ 349
Query: 117 DLFDE---KKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMV 173
D+ +E +G I+F EF+ ++ T E++I AFR++D G I ++R V
Sbjct: 350 DMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH-V 408
Query: 174 VATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
+ L E L+DE +D+ +AD DGDG++N EE+
Sbjct: 409 MTNLGEK---LTDEE----VDEMIREADIDGDGQVNYEEF 441
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 25 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ ++D DGD
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIRESDIDGD 134
Query: 206 GKINREEWKSFALSH 220
G++N EE+ + S
Sbjct: 135 GQVNYEEFVTMMTSK 149
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E +G I+F EF+ ++ T
Sbjct: 324 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDS 381
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 382 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 433
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 434 GQVNYEEF 441
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 109 NLFLDRVFDLFDEK-KNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
N F +R+ +F + FE+F+ LS+F + + K +AFR++D + G + E
Sbjct: 90 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE 149
Query: 168 QVRQMV-VATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHP 221
+ ++V T + LS +K +ID ++D D DG IN E++ P
Sbjct: 150 DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 204
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 109 NLFLDRVFDLFD-EKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
N F +R+ +F + FE+F+ LS+F + + K +AFR++D + G + E
Sbjct: 59 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRE 118
Query: 168 QVRQMV-VATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHP 221
+ ++V T + LS +K +ID ++D D DG IN E++ P
Sbjct: 119 DLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 173
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E +G I+F EF+ ++ T
Sbjct: 325 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDS 382
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 434
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 435 GQVNYEEF 442
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E +G I+F EF+ ++ T
Sbjct: 316 DGTITTKEL--GTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDS 373
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L E L+DE +D+ +AD DGD
Sbjct: 374 EEEIREAFRVFDKDGNGYISAAELRH-VMTNLGEK---LTDEE----VDEMIREADIDGD 425
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 426 GQVNYEEF 433
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +A+ DGD
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREANIDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 119 FDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQ 178
D NG ++F EF+ ++ T E++I AFR++D G + ++R ++
Sbjct: 55 IDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRL-- 112
Query: 179 ESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G LSDE +D+ AD DGDG++N EE+
Sbjct: 113 --GEKLSDEE----VDEMIRAADTDGDGQVNYEEF 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
D NG I+F EF+ + T E++I AFR++D G I ++R +
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--- 113
Query: 180 SGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G L+DE +D+ +AD DGDG++N EE+
Sbjct: 114 -GEKLTDEE----VDQXIREADIDGDGQVNYEEF 142
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVR 170
+++ +F FD + I+F E+V AL++ T LE K+ + F++YD GCI+ +++
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCIDRQELL 118
Query: 171 QMVVATL------------QESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFAL 218
+V + ++ G L+ E ++D+ F D +GDG+++ E+ A
Sbjct: 119 DIVESIYKLKKACSVEVEAEQQGKLLTPEE---VVDRIFLLVDENGDGQLSLNEFVEGAR 175
Query: 219 SHPTLLKNMTL 229
++K + +
Sbjct: 176 RDKWVMKMLQM 186
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E +G I+F EF+ ++ T
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 133
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 134 GQVNYEEF 141
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
D NG I+F EF+ + T E++I AFR++D G I ++R +
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--- 112
Query: 180 SGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G L+DE +D+ +AD DGDG++N EE+
Sbjct: 113 -GEKLTDEE----VDEXIREADIDGDGQVNYEEF 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
D NG I F EF+ + T E++I AFR++D G I ++R +
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--- 112
Query: 180 SGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G L+DE +D+ +AD DGDG++N EE+
Sbjct: 113 -GEKLTDEE----VDEXIREADIDGDGQVNYEEF 141
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 58 LVRLANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLK--TTSGENLFLDR 114
L L N+ FT E+ + Y+ F KE S G I ++E + K + +
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPS-----GRITRQEFQTIYSKFFPEADPKAYAQH 67
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
VF FD +G ++F+E+V AL + + K+++AF LYD+ G I +V ++V
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 175 ATLQ 178
A +
Sbjct: 127 AIFK 130
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 58 LVRLANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLK--TTSGENLFLDR 114
L L N+ FT E+ + Y+ F KE S G I ++E + K + +
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPS-----GRITRQEFQTIYSKFFPEADPKAYAQH 67
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
VF FD +G ++F+E+V AL + + K+++AF LYD+ G I +V ++V
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 175 ATLQ 178
A +
Sbjct: 127 AIFK 130
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 58 LVRLANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLK--TTSGENLFLDR 114
L L N+ FT E+ + Y+ F KE S G I ++E + K + +
Sbjct: 14 LEELQLNTKFTEEELSSWYQSFLKECPS-----GRITRQEFQTIYSKFFPEADPKAYAQH 68
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
VF FD +G ++F+E+V AL + + K+++AF LYD+ G I +V ++V
Sbjct: 69 VFRSFDANSDGTLDFKEYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVT 127
Query: 175 ATLQ 178
A +
Sbjct: 128 AIFK 131
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 58 LVRLANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLK--TTSGENLFLDR 114
L L N+ FT E+ + Y+ F KE S G I ++E + K + +
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPS-----GRITRQEFQTIYSKFFPEADPKAYAQH 67
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
VF FD +G ++F+E+V AL + + K+++AF LYD+ G I +V ++V
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 175 ATLQ 178
A +
Sbjct: 127 AIFK 130
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 79 FKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRA 135
FKE S DG +L + + G+N + D+ +E NG I+F +F+
Sbjct: 313 FKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTM 372
Query: 136 LSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDK 195
++ T E++I AFR++ G I Q+R V+ L E L+DE +D+
Sbjct: 373 MARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRH-VMTNLGEK---LTDEE----VDE 424
Query: 196 TFADADADGDGKINREEW 213
+A DGDG++N E++
Sbjct: 425 MIREAGIDGDGQVNYEQF 442
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 99 LALLKTTSGENLFLDRVFDLFDEKKN---GVIEFEEFVRALSIFHPSTPLEDKIDFAFRL 155
L L T G+N + DL E +N G + F EF ++ T E+++ AF++
Sbjct: 32 LGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKI 91
Query: 156 YDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
+D G I P ++R +++ G ++DE ID+ +AD DGDG IN EE+
Sbjct: 92 FDRDGDGFISPAELRFVMINL----GEKVTDEE----IDEMIREADFDGDGMINYEEF 141
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 25/158 (15%)
Query: 64 NSPFTINEVEALYELFKELSSSLID---DGLIHKEELRLALLKTTSGENLFLDRVFDLFD 120
NS + + +YE F SL D DG + EL++A+ G L + DL D
Sbjct: 14 NSELLEEQKQEIYEAF-----SLFDMNNDGFLDYHELKVAM--KALGFELPKREILDLID 66
Query: 121 E---KKNGVIEFEEF--VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
E + ++++++F V I PL D+I AF+L+D TG I + +R++
Sbjct: 67 EYDSEGRHLMKYDDFYIVMGEKIL-KRDPL-DEIKRAFQLFDDDHTGKISIKNLRRVA-- 122
Query: 176 TLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
+E G L+DE L+A+I++ D DGDG+IN E+
Sbjct: 123 --KELGETLTDEELRAMIEEF----DLDGDGEINENEF 154
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA--RKMKDS 79
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 80 EEEIREAFRVFDKDGNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADIDGD 131
Query: 206 GKINREEWKSFALSH 220
G++N EE+ + S
Sbjct: 132 GQVNYEEFVTMMTSK 146
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 58 LVRLANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLK--TTSGENLFLDR 114
L L N+ FT E+ + Y+ F KE S G I ++E + K + +
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPS-----GRITRQEFQTIYSKFFPEADPKAYAQH 67
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
VF FD +G ++F+++V AL + + K+++AF LYD+ G I +V ++V
Sbjct: 68 VFRSFDANSDGTLDFKQYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 175 ATLQ 178
A +
Sbjct: 127 AIFK 130
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 90 GLIHKEELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKI 149
G + KE L L T E E +G I +EF S F P +
Sbjct: 6 GALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYA 65
Query: 150 DFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHL-SDESLKAIIDKTFADADADGDGKI 208
FR +D G ++ +Q V+A +H+ S ++ F+ D DG+G I
Sbjct: 66 QHVFRSFDANSDGTLD---FKQYVIA------LHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 209 NREE 212
++ E
Sbjct: 117 SKNE 120
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 58 LVRLANNSPFTINEVEALYELF-KELSSSLIDDGLIHKEELRLALLK--TTSGENLFLDR 114
L L N+ FT E+ + Y+ F KE S G I ++E + K + +
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPS-----GRITRQEFQTIYSKFFPEADPKAYAQH 67
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
VF FD +G ++F+++V AL + + K+++AF LYD+ G I +V ++V
Sbjct: 68 VFRSFDANSDGTLDFKQYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVT 126
Query: 175 ATLQ 178
A +
Sbjct: 127 AIFK 130
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 90 GLIHKEELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKI 149
G + KE L L T E E +G I +EF S F P +
Sbjct: 6 GALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYA 65
Query: 150 DFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHL-SDESLKAIIDKTFADADADGDGKI 208
FR +D G ++ +Q V+A +H+ S ++ F+ D DG+G I
Sbjct: 66 QHVFRSFDANSDGTLD---FKQYVIA------LHMTSAGKTNQKLEWAFSLYDVDGNGTI 116
Query: 209 NREE 212
++ E
Sbjct: 117 SKNE 120
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E+++ FR++D G I+ E
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMK-EDAKGKSEEELAECFRIFDRNADGYIDAE 113
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ ++ A SG H++DE +++++ D D + DG+I+ +E+
Sbjct: 114 ELAEIFRA----SGEHVTDEEIESLM----KDGDKNNDGRIDFDEF 151
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
FD+FD G I +E + + TP ++++D D +G I+ E+ M+V
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Query: 175 ATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
++E S+E L + F D + DG I+ EE
Sbjct: 81 RQMKEDAKGKSEEELA----ECFRIFDRNADGYIDAEE 114
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++ T
Sbjct: 20 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 77
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E +I AFR++D G I ++R V+ L G L+DE +D+ +A+ DGD
Sbjct: 78 E-EIREAFRVFDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREANIDGD 128
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 129 GQVNYEEF 136
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E+++ FR++D G I+ E
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMK-EDAKGKSEEELAELFRIFDRNADGYIDAE 113
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ ++ A SG H++DE +++++ D D + DG+I+ +E+
Sbjct: 114 ELAEIFRA----SGEHVTDEEIESLM----KDGDKNNDGRIDFDEF 151
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
FD+FD G I +E + + TP ++++D D +G I+ E+ M+V
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Query: 175 ATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
++E S+E L + + F D + DG I+ EE
Sbjct: 81 RQMKEDAKGKSEEELAELF-RIF---DRNADGYIDAEE 114
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 114 RVFDLFDEKKNGVIEFEEF--VRALSIFHPSTP--LEDKIDFAFRLYDLRETGCIEPEQV 169
++ D FD NG I+F+ F + A + P ++ ++ AFRLYD G I + +
Sbjct: 54 QLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVM 113
Query: 170 RQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
R+ ++A L E+ LS E L A+ID+ DADG G ++ EE+
Sbjct: 114 RE-ILAELDET---LSSEDLDAMIDEI----DADGSGTVDFEEF 149
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 119 FDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQ 178
D++ G + F +F+ ++ +++I AF+L+D ETG I + ++++ +
Sbjct: 51 IDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA----K 106
Query: 179 ESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
E G +L+DE L+ +ID +AD DGDG+++ +E+
Sbjct: 107 ELGENLTDEELQEMID----EADRDGDGEVSEQEF 137
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AF+++D G I ++R V+ L G L+D+ +D+ +AD DGD
Sbjct: 82 EEELIEAFKVFDRDGNGLISAAELRH-VMTNL---GEKLTDDE----VDEMIREADIDGD 133
Query: 206 GKINREEWKSFALS 219
G IN EE+ +S
Sbjct: 134 GHINYEEFVRMMVS 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 89 DGLIHKEELRLALLKTTSGENLFLDRVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPL 145
DG I +EL + + G+N + D+ +E NG I+F EF+ ++
Sbjct: 24 DGTITTKELGTVM--RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS 81
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AF+++D G I ++R V+ L G L+D+ +D+ +AD DGD
Sbjct: 82 EEELIEAFKVFDRDGNGLISAAELRH-VMTNL---GEKLTDDE----VDEMIREADIDGD 133
Query: 206 GKINREEWKSFALS 219
G IN EE+ +S
Sbjct: 134 GHINYEEFVRMMVS 147
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 140 HPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFAD 199
H T E+++ AF+++D + G I ++R +++ G L+DE ++ +I +
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMI----KE 53
Query: 200 ADADGDGKINREE 212
AD DGDG++N EE
Sbjct: 54 ADLDGDGQVNYEE 66
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E++++ FR++D G I+ E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMK-EDAKGKSEEELEDCFRIFDKNADGFIDIE 116
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ +++ AT G H+++E ++ ++ D+D + DG+I+ +E+
Sbjct: 117 ELGEILRAT----GEHVTEEDIEDLM----KDSDKNNDGRIDFDEF 154
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 25/158 (15%)
Query: 64 NSPFTINEVEALYELFKELSSSLID---DGLIHKEELRLALLKTTSGENLFLDRVFDLFD 120
NS + + +YE F SL D DG + EL++A G L + DL D
Sbjct: 14 NSELLEEQKQEIYEAF-----SLFDXNNDGFLDYHELKVA--XKALGFELPKREILDLID 66
Query: 121 E---KKNGVIEFEEF--VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
E + + ++++F V I PL D+I AF+L+D TG I + +R++
Sbjct: 67 EYDSEGRHLXKYDDFYIVXGEKIL-KRDPL-DEIKRAFQLFDDDHTGKISIKNLRRVA-- 122
Query: 176 TLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
+E G L+DE L+A I++ D DGDG+IN E+
Sbjct: 123 --KELGETLTDEELRAXIEEF----DLDGDGEINENEF 154
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 127 IEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSD 186
+ F +F+ ++ +++I AF+L+D ETG I + ++++ +E G +L+D
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA----KELGENLTD 56
Query: 187 ESLKAIIDKTFADADADGDGKINREEW 213
E L+ +ID +AD DGDG+++ +E+
Sbjct: 57 EELQEMID----EADRDGDGEVSEQEF 79
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR++ E+ D FR++D G I+ +
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMFDKNADGYIDLD 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +EW F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEWLEF 156
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E+ D FR++D G I+ E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAD-CFRIFDKNADGFIDIE 116
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ +++ AT G H+++E ++ ++ D+D + DG+I+ +E+
Sbjct: 117 ELGEILRAT----GEHVTEEDIEDLM----KDSDKNNDGRIDFDEF 154
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E+++ FR++D G I+ E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMK-EDAKGKSEEELANCFRIFDKNADGFIDIE 116
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ +++ AT G H+++E ++ ++ D+D + DG+I+ +E+
Sbjct: 117 ELGEILRAT----GEHVTEEDIEDLM----KDSDKNNDGRIDFDEF 154
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E+++ FR++D G I+ E
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMK-EDAKGKSEEELANCFRIFDKNADGFIDIE 113
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ +++ AT G H+++E ++ ++ D+D + DG+I+ +E+
Sbjct: 114 ELGEILRAT----GEHVTEEDIEDLM----KDSDKNNDGRIDFDEF 151
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
D++ G F +F+ + +++I AF+L+D ETG I + ++++ +E
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA----KE 132
Query: 180 SGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
G +L+DE L+ ID +AD DGDG+++ +E+
Sbjct: 133 LGENLTDEELQEXID----EADRDGDGEVSEQEF 162
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 8/62 (12%)
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
AF+L+D ETG I + ++++ +E G +L+DE L+ +ID +AD DGDG+++ +
Sbjct: 16 AFKLFDDDETGKISFKNLKRVA----KELGENLTDEELQEMID----EADRDGDGEVSEQ 67
Query: 212 EW 213
E+
Sbjct: 68 EF 69
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 119 FDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQ 178
D+ +G I+FEEF+ ++ ++I AFRL+D +G I + +R++ +
Sbjct: 73 IDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVA----K 128
Query: 179 ESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
E G +L++E L+ +I A+AD + D +I+ +E+
Sbjct: 129 ELGENLTEEELQEMI----AEADRNDDNEIDEDEF 159
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AFR++D + G I ++R V+ L G L+DE +D+ +AD DGD
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRH-VMTNL---GEKLTDEE----VDEMIREADVDGD 54
Query: 206 GKINREEW 213
G+IN EE+
Sbjct: 55 GQINYEEF 62
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
LD + + DE +G I+FEEF VR + E+++ FR++D G I+ E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMK-EDAKGKSEEELANCFRIFDKNADGFIDIE 116
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ +++ AT G H+ +E ++ ++ D+D + DG+I+ +E+
Sbjct: 117 ELGEILRAT----GEHVIEEDIEDLM----KDSDKNNDGRIDFDEF 154
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 38.1 bits (87), Expect = 0.005, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E++I AFR++D G I ++R + + G L+DE +D+ +AD DGD
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEE----VDEMIREADIDGD 52
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 53 GQVNYEEF 60
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 37.7 bits (86), Expect = 0.006, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADA 202
T E++I AFR++D G I ++R + + G L+DE +D+ +AD
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEE----VDEMIREADI 52
Query: 203 DGDGKINREEW 213
DGDG++N EE+
Sbjct: 53 DGDGQVNYEEF 63
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 37.7 bits (86), Expect = 0.006, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADA 202
T E++I AFR++D G I ++R + + G L+DE +D+ +AD
Sbjct: 5 TDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEE----VDEMIREADI 56
Query: 203 DGDGKINREEW 213
DGDG++N EE+
Sbjct: 57 DGDGQVNYEEF 67
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTP--LEDKIDFAFRLYDLRETGCIEPEQ 168
+ VF FD +G ++F+E+V AL H +T K+++AF LYD+ G I +
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIAL---HXTTAGKTNQKLEWAFSLYDVDGNGTISKNE 128
Query: 169 VRQMVVATLQ 178
V ++V A +
Sbjct: 129 VLEIVXAIFK 138
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 78 LFKELSSSLIDDGLIHKEELRLALLKTTSGE-NLFLDRVFDLFDEKKNGVIEFEEFVRAL 136
+F+ S+L DG + +E +AL TT+G+ N L+ F L+D NG I E + +
Sbjct: 76 VFRSFDSNL--DGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
Query: 137 -SIFHPSTPLEDKI 149
+IF TP + K+
Sbjct: 134 XAIFKXITPEDVKL 147
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 37.7 bits (86), Expect = 0.007, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADA 202
T E++I AFR++D G I ++R + + G L+DE +D+ +AD
Sbjct: 4 TDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEE----VDEMIREADI 55
Query: 203 DGDGKINREEW 213
DGDG++N EE+
Sbjct: 56 DGDGQVNYEEF 66
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 37.7 bits (86), Expect = 0.007, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADA 202
T E++I AFR++D G I ++R + + G L+DE +D+ +AD
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEE----VDEMIREADI 52
Query: 203 DGDGKINREEW 213
DGDG++N EE+
Sbjct: 53 DGDGQVNYEEF 63
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 37.7 bits (86), Expect = 0.007, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADA 202
T E++I AFR++D G I ++R + + G L+DE +D+ +AD
Sbjct: 2 TDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEE----VDEMIREADI 53
Query: 203 DGDGKINREEW 213
DGDG++N EE+
Sbjct: 54 DGDGQVNYEEF 64
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR++ E+ D FR++D G I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDL-FRMFDKNADGYIDLE 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E+ F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEFLEF 156
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR++ E+ D FR++D G I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMFDKNADGYIDLE 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E+ F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEFLEF 156
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGD 205
E+++ AF+++D + G I ++R +++ G L+DE ++ +I +AD DGD
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMIK----EADLDGD 54
Query: 206 GKINREEW 213
G++N EE+
Sbjct: 55 GQVNYEEF 62
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
AFRLYD G I + +R+ ++A L E+ LS E L A+ID+ DADG G ++ E
Sbjct: 8 AFRLYDKEGNGYISTDVMRE-ILAELDET---LSSEDLDAMIDEI----DADGSGTVDFE 59
Query: 212 EW 213
E+
Sbjct: 60 EF 61
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 71 EVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLF---DEKKNGVI 127
E+ L E F + + G I EEL+ L + G NL + DL D +G I
Sbjct: 25 EIAGLKEXFNXIDAD--KSGQITFEELKAGLKRV--GANLKESEILDLXQAADVDNSGTI 80
Query: 128 EFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDE 187
+++EF+ A ++ ED + AF +D +G I P++++Q +E G+ E
Sbjct: 81 DYKEFI-AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQ----ACEEFGV----E 131
Query: 188 SLKAIIDKTFADADADGDGKINREEW 213
++ I++ D D D DG+I+ E+
Sbjct: 132 DVR--IEELXRDVDQDNDGRIDYNEF 155
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 141 PSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADA 200
T E++I AFR+ D G I ++R V+ L G L+DE +D+ +A
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRH-VMTNL---GEKLTDEE----VDEMIREA 74
Query: 201 DADGDGKINREEW 213
D DGDG++N EE+
Sbjct: 75 DIDGDGQVNYEEF 87
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR + E+ D FR++D G I+ E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDL-FRMFDKNADGYIDLE 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E+ F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEFLEF 156
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 112 LDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQ 171
+D+V D D KNG IE+ EFV +++ + ++++ AFR++D +G I ++
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 442
Query: 172 MVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFAL 218
+ + + E+ K+++ ++ D + DG+++ +E++ L
Sbjct: 443 IFGVS------DVDSETWKSVL----SEVDKNNDGEVDFDEFQQMLL 479
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 142 STPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADAD 201
S+ D+I F + D ++G IE E++ Q+ + S L+ KA + A D
Sbjct: 37 SSKTPDQIKKVFGILDQDKSGFIEEEEL-QLFLKNFSSSARVLTSAETKAFL----AAGD 91
Query: 202 ADGDGKINREEWKSF 216
DGDGKI EE++S
Sbjct: 92 TDGDGKIGVEEFQSL 106
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 142 STPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADAD 201
S+ D+I F + D ++G IE E++ Q+ + S L+ KA + A D
Sbjct: 36 SSKTPDQIKKVFGILDQDKSGFIEEEEL-QLFLKNFSSSARVLTSAETKAFL----AAGD 90
Query: 202 ADGDGKINREEWKSF 216
DGDGKI EE++S
Sbjct: 91 TDGDGKIGVEEFQSL 105
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 112 LDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQ 171
+D+V D D KNG IE+ EFV +++ + ++++ AFR++D +G I ++
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 465
Query: 172 MVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFAL 218
+ + +S E+ K+++ ++ D + DG+++ +E++ L
Sbjct: 466 IFGVSDVDS------ETWKSVL----SEVDKNNDGEVDFDEFQQMLL 502
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 112 LDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQ 171
+D+V D D KNG IE+ EFV +++ + ++++ AFR++D +G I ++
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 466
Query: 172 MVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFAL 218
+ + +S E+ K+++ ++ D + DG+++ +E++ L
Sbjct: 467 IFGVSDVDS------ETWKSVL----SEVDKNNDGEVDFDEFQQMLL 503
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR++ E+ D FR++D G I+ +
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMWDKNADGYIDLD 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E+ F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEFLEF 156
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 78 LFKELSSSLIDDGLIHKEELRLALLKTTSGEN-LFLDRVFDLFDEKKNGVIEFEEFVRAL 136
LFKE+ + DG + EE++ + K + +N L +F D NG I+ EF +
Sbjct: 5 LFKEIDVN--GDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 137 SIFHPSTPLEDKIDFA--FRLYDLRETGCIEPEQVRQMVVATLQESGMH-LSDESLKAII 193
+DKI ++L D+ G + E+V + ++ G+ ++++ +KA
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKA-- 116
Query: 194 DKTFADADADGDGKINREEWKSFAL 218
DA+GDG I EE+ F+L
Sbjct: 117 -------DANGDGYITLEEFLEFSL 134
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
+F D +G + +EE V+A + E + F+ D G I+ + +
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY- 62
Query: 175 ATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHP 221
++Q G LSD+ + + + D DGDGK+ +EE SF H
Sbjct: 63 GSIQ--GQDLSDDKIGLKV--LYKLMDVDGDGKLTKEEVTSFFKKHG 105
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 78 LFKELSSSLIDDGLIHKEELRLALLKTTSGEN-LFLDRVFDLFDEKKNGVIEFEEFVRAL 136
LFKE+ + DG + EE++ + K + +N L +F D NG I+ EF +
Sbjct: 5 LFKEIDVN--GDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 137 SIFHPSTPLEDKIDFA--FRLYDLRETGCIEPEQVRQMVVATLQESGMH-LSDESLKAII 193
+DKI ++L D+ G + E+V + ++ G+ ++++ +KA
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKA-- 116
Query: 194 DKTFADADADGDGKINREEWKSFAL 218
DA+GDG I EE+ F+L
Sbjct: 117 -------DANGDGYITLEEFLEFSL 134
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
+F D +G + +EE V+A + E + F+ D G I+ + +
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY- 62
Query: 175 ATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFALSHP 221
++Q G LSD+ + + + D DGDGK+ +EE SF H
Sbjct: 63 GSIQ--GQDLSDDKIGLKV--LYKLMDVDGDGKLTKEEVTSFFKKHG 105
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 69 INEVEALYELFKELSSSLIDDGLIHKEELRLALLK-TTSGENLFLDRVFDLFDEKKNGVI 127
++E + +ELF + G I KE L+ L + E + +F+ D NG I
Sbjct: 5 VSEFKEAFELFDSERT-----GFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKI 59
Query: 128 EFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSD 186
+F EF+ + T ED + AFR +D TG I P+ A LQ++ ++L D
Sbjct: 60 QFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYI-PK-------AALQDALLNLGD 110
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
AF L+D TG I E ++ L++ G+ + A ++ F +ADA G+GKI
Sbjct: 11 AFELFDSERTGFITKEGLQ----TVLKQFGVRVE----PAAFNEMFNEADATGNGKIQFP 62
Query: 212 EWKS 215
E+ S
Sbjct: 63 EFLS 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 35.4 bits (80), Expect = 0.033, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADA 202
T E++I AFR++D G I +R + + G L+DE +D+ +AD
Sbjct: 3 TDSEEEIREAFRVFDKDGNGYISAADLRHV----MTNLGEKLTDEE----VDEMIREADI 54
Query: 203 DGDGKINREEW 213
DGDG++N E++
Sbjct: 55 DGDGQVNYEDF 65
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 32/202 (15%)
Query: 24 VFSPFIGFVEDLIFSLTGCFDHHCPPKLRYTFNDLVRLANNSPFTINEVEALYELFKELS 83
+ + F L + T C +H P +Y ++ +P TI+++ +L +
Sbjct: 256 LIRKMLTFHPSLRITATQCLEH--PWIQKY--------SSETP-TISDLPSLESAMTNIR 304
Query: 84 SSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSIF---- 139
+ L L +A TT E L +F D +G+++ +E VR F
Sbjct: 305 QFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLK 364
Query: 140 ---------HPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLK 190
+ + +ED+ID L D+ +G IE + +A+ + + LS E +
Sbjct: 365 GVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEF----IASAIDRTILLSRERM- 419
Query: 191 AIIDKTFADADADGDGKINREE 212
++ F D DG GKI+ +E
Sbjct: 420 ---ERAFKMFDKDGSGKISTKE 438
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR++ E+ D FR++D G I+ +
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMFDKNADGYIDLD 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEXLEF 156
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL SG L F D + FD + G I F++F++ + T +
Sbjct: 86 GMIDKNELKQAL----SGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 140
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 141 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 167
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL + +G L F D + FD + G I F++F++ + T +
Sbjct: 89 GMIDKNELKQAL--SGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 145
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 146 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 172
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 112 LDRVFDLFDEKKNGVIEFEEF----VRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPE 167
L + D DE +G ++F+EF VR++ E+ D FR+ D G I+ +
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMXDKNADGYIDLD 115
Query: 168 QVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E+ F
Sbjct: 116 ELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDEFLEF 156
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 40/166 (24%)
Query: 68 TINEVEALYELFKELSSSLIDDGLIHKEEL------------RLALLKTTSGENLFLDRV 115
T+ E + L ++FK+L + DG + K+EL L LK E +D +
Sbjct: 350 TLEERKELTDIFKKLDKN--GDGQLDKKELIEGYNVLRNFKNELGELKNVEEE---VDNI 404
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPL--EDKIDFAFRLYDLRETGCIEPEQVRQMV 173
D KNG IE+ EF+ S+ L E+++ AF L+D ++G I E++ +
Sbjct: 405 LKEVDFDKNGYIEYSEFI---SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF 461
Query: 174 VATLQESGMHLSDESLKAIIDKTFAD----ADADGDGKINREEWKS 215
L +I +KT+ D AD + D I+ +E+ S
Sbjct: 462 --------------GLTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
AF+++D G I ++R V+ L G L+D+ +D+ +AD DGDG IN E
Sbjct: 13 AFKVFDRDGNGLISAAELRH-VMTNL---GEKLTDDE----VDEMIREADIDGDGHINYE 64
Query: 212 EWKSFALS 219
E+ +S
Sbjct: 65 EFVRMMVS 72
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 110 LFLDRVFDLFDEKKNGVI---EFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE- 165
++ D +FD+ D+ +NG I E++ + +A I S E+ FR+ D+ E+G ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 166 PEQVRQ 171
E RQ
Sbjct: 165 DEMTRQ 170
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 110 LFLDRVFDLFDEKKNGVI---EFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE- 165
++ D +FD+ D+ +NG I E++ + +A I S E+ FR+ D+ E+G ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 166 PEQVRQMV 173
E RQ +
Sbjct: 165 DEXTRQHL 172
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 71 EVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFDEK---KNGVI 127
E+ L ELFK + + + G I +EL+ L + G L + DL D K+G I
Sbjct: 8 EIGGLKELFKMIDTD--NSGTITFDELKDGLKRV--GSELMESEIKDLMDAADIDKSGTI 63
Query: 128 EFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDE 187
++ EF+ A ++ E+ + AF +D +G I ++++Q D
Sbjct: 64 DYGEFI-AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQAC-----------KDF 111
Query: 188 SLKAI-IDKTFADADADGDGKIN--------REEWKSFALSHPTLLKNMTL 229
L I ID + D D DG+I+ R+ + + T+ K + L
Sbjct: 112 GLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNL 162
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
F+ D +G IE E+++ V+ + G L+D KA + AD DGDGKI +E
Sbjct: 48 FKAIDADASGFIEEEELK-FVLKSFAADGRDLTDAETKAFLKA----ADKDGDGKIGIDE 102
Query: 213 WKSF 216
+++
Sbjct: 103 FETL 106
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTF-ADADADGDGKINRE 211
FR+ D ++G IE ++++ + ESG + L A KTF A AD DGDGKI E
Sbjct: 47 FRILDNDQSGFIEEDELKYFLQRF--ESGARV----LTASETKTFLAAADHDGDGKIGAE 100
Query: 212 EWKSFALS 219
E++ S
Sbjct: 101 EFQEMVQS 108
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 142 STPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADAD 201
S D I AF D ++G IE ++++ + + + L+D KA + D
Sbjct: 37 SGKSADDIKKAFVFIDQDKSGFIEEDELK-LFLQVFKAGARALTDAETKAFLKA----GD 91
Query: 202 ADGDGKINREEW 213
+DGDG I EEW
Sbjct: 92 SDGDGAIGVEEW 103
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 142 STPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADAD 201
S D I AF D ++G IE ++++ + + + L+D KA + D
Sbjct: 36 SGKSADDIKKAFVFIDQDKSGFIEEDELK-LFLQVFKAGARALTDAETKAFLKA----GD 90
Query: 202 ADGDGKINREEW 213
+DGDG I EEW
Sbjct: 91 SDGDGAIGVEEW 102
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 33.1 bits (74), Expect = 0.16, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 145 LEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADG 204
LED + AFR +D G I +++R+ + G L E L A+I +AD D
Sbjct: 5 LED-LQVAFRAFDQDGDGHITVDELRRAMAGL----GQPLPQEELDAMI----READVDQ 55
Query: 205 DGKINREEW 213
DG++N EE+
Sbjct: 56 DGRVNYEEF 64
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 112 LDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQ 171
+D+V D D KNG IE+ EFV ++ + ++++ AFR +D +G I ++
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV-TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELAT 442
Query: 172 MVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFAL 218
+ + +S E+ K+++ ++ D + DG+++ +E++ L
Sbjct: 443 IFGVSDVDS------ETWKSVL----SEVDKNNDGEVDFDEFQQXLL 479
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL + G L F D + FD + G I F++F++ + T +
Sbjct: 86 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 142
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 143 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 169
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL + G L F D + FD + G I F++F++ + T +
Sbjct: 85 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 141
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 142 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 168
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL + G L F D + FD + G I F++F++ + T +
Sbjct: 107 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 163
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 164 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 190
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL + G L F D + FD + G I F++F++ + T +
Sbjct: 108 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 164
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 165 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 191
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 90 GLIHKEELRLALLKTTSGENL---FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
G+I K EL+ AL + G L F D + FD + G I F++F++ + T +
Sbjct: 89 GMIDKNELKQAL--SGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI- 145
Query: 147 DKIDFAFRLYDLRETGCIEP--EQVRQMVVATL 177
FR YD + G I+ EQ MV + +
Sbjct: 146 ------FRRYDTDQDGWIQVSYEQYLSMVFSIV 172
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 110 LFLDRVFDLFDEKKNGVI---EFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE- 165
L+ D +FD+ D+ +NG I E++ + ++ I S E+ FR+ D+ E+G ++
Sbjct: 109 LWGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 166 PEQVRQ 171
E RQ
Sbjct: 165 DEMTRQ 170
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 120 DEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
D NG I+F EF+ ++ T E++I AFR++D G I ++R ++
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 115 VFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVV 174
+F D +G + +EE V+A E + F+ D+ G I+ + +
Sbjct: 5 LFKQLDANGDGSVSYEE-VKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 175 ATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
A ++ LSDE + I + DADGDGK+ +EE +F
Sbjct: 64 AVKEQD---LSDEKVGLKI--LYKLMDADGDGKLTKEEVTTF 100
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 78 LFKELSSSLIDDGLIHKEELR--LALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRA 135
LFK+L ++ DG + EE++ ++ + E L L +F D NG I+ EF +
Sbjct: 5 LFKQLDAN--GDGSVSYEEVKAFVSSKRPIKNEQL-LQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 136 LSIFHPSTPLEDKIDFA--FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAII 193
+ ++K+ ++L D G + E+V ++ G ++
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTF----FKKFGYE-------KVV 110
Query: 194 DKTFADADADGDGKINREEWKSFAL 218
D+ ADA+GDG I EE+ +F L
Sbjct: 111 DQIMK-ADANGDGYITLEEFLAFNL 134
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 145 LEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMH----LSDESLKAIIDKTFADA 200
+ +K+ +AF LYD+ + G I E++ ++ + G H L +++ +++ F
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 201 DADGDGKINREEWKSFALSHPTLLKNMTL 229
D + DG + EE+ ++ +M L
Sbjct: 67 DRNQDGVVTIEEFLEACQKDENIMSSMQL 95
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 15/61 (24%)
Query: 89 DGLIHKEELRLALLKTTS---GENLF-----------LDRVFDLFDEKKNGVIEFEEFVR 134
DG I KEE+ LA++K+ G + + ++R F+ D ++GV+ EEF+
Sbjct: 23 DGYITKEEM-LAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLE 81
Query: 135 A 135
A
Sbjct: 82 A 82
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D + AF + D ++G IE ++++ + + S L+D KA + AD D DGDG
Sbjct: 41 DDVKKAFYVIDQDKSGFIEEDELK-LFLQNFSPSARALTDAETKAFL----ADGDKDGDG 95
Query: 207 KINREEWKS 215
I +E+ +
Sbjct: 96 MIGVDEFAA 104
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D + AF + D ++G IE ++++ + + + L+D K + D+DGDG
Sbjct: 41 DDVKKAFAIIDQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKA----GDSDGDG 95
Query: 207 KINREEW 213
KI +EW
Sbjct: 96 KIGVDEW 102
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSI---------FHPSTPLEDKIDFA--FRLYDLR 159
+ D +FD+ K+G ++ + R L++ S+ +E K DF F YD+
Sbjct: 149 YTDAXXKIFDKNKDGRLDLNDLARILALQENFLLQFKXDASSQVERKRDFEKIFAHYDVS 208
Query: 160 ETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
TG +E +V V + +S L + D + DGKI + E
Sbjct: 209 RTGALEGPEVDGFVKDXXELVRPSISGGDLDKFRECLLTHCDXNKDGKIQKSE 261
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D I AF + D ++G IE ++++ + + L+D KA + D+DGDG
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELK-LFLQVFSAGARALTDAETKAFLKA----GDSDGDG 96
Query: 207 KINREEWKS 215
I +EW +
Sbjct: 97 AIGVDEWAA 105
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE-PEQV 169
+ D VFD+FD+ +G I +E+ +A +P ++ + FR DL ++G ++ E
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMT 172
Query: 170 RQ 171
RQ
Sbjct: 173 RQ 174
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
AFR+ D + G I+ + +R ++ + L DE + I+ A+ D DG G ++ E
Sbjct: 12 AFRVLDKEKKGVIKVDVLRWILKS--------LGDELTEDEIENMIAETDTDGSGTVDYE 63
Query: 212 EWKSFALS 219
E+K +S
Sbjct: 64 EFKCLMMS 71
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 145 LEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADG 204
+ D ++ F+ +D G I ++ L+ G +DE + + A+ D DG
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTD----ALRTLGSTSADE-----VQRMMAEIDTDG 51
Query: 205 DGKINREEWKSFALSHPTLLKNMTLPF 231
DG I+ E+ SF ++P L+K++ F
Sbjct: 52 DGFIDFNEFISFCNANPGLMKDVAKVF 78
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
F + D ++G IE E+++ V+ G L+D KA++ A D+D DGKI +E
Sbjct: 47 FEILDKDQSGFIEEEELKG-VLKGFSAHGRDLNDTETKALL----AAGDSDHDGKIGADE 101
Query: 213 W 213
+
Sbjct: 102 F 102
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR D ++G ++ E+++ + + L++ K+++ A AD DGDGKI EE
Sbjct: 48 FRFIDNDQSGYLDEEELK-FFLQKFESGARELTESETKSLM----AAADNDGDGKIGAEE 102
Query: 213 WKSFALS 219
++ S
Sbjct: 103 FQEMVHS 109
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE-PEQV 169
+ D VFD+FD+ +G I +E+ +A +P ++ + FR DL +G ++ E
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 170 RQ 171
RQ
Sbjct: 173 RQ 174
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE-PEQV 169
+ D VFD+FD+ +G I +E+ +A +P ++ + FR DL +G ++ E
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 170 RQ 171
RQ
Sbjct: 173 RQ 174
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 113 DRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE-PEQVRQ 171
D VFD+FD+ +G I +E+ +A +P ++ + FR DL +G ++ E RQ
Sbjct: 116 DAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQ 174
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D ++ F+ +D G I ++ L+ G +DE + + A+ D DGDG
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTD----ALRTLGSTSADE-----VQRMMAEIDTDGDG 52
Query: 207 KINREEWKSFALSHPTLLKNMTLPF 231
I+ E+ SF ++P L+K++ F
Sbjct: 53 FIDFNEFISFCNANPGLMKDVAKVF 77
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 114 RVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVR 170
V DL +E N IEF EF+ +S S E ++ AF+++D G I +++
Sbjct: 47 EVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELK 106
Query: 171 QMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
++ + G L+D A +D + +DG G+IN +++ +
Sbjct: 107 HVLTSI----GEKLTD----AEVDDMLREV-SDGSGEINIQQFAAL 143
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE-PEQV 169
+ D VFD+FD+ +G I +E+ +A +P ++ + FR DL G ++ E
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Query: 170 RQ 171
RQ
Sbjct: 173 RQ 174
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR D ++G ++ ++++ + Q L++ K+++D AD DGDGKI +E
Sbjct: 47 FRFIDNDQSGYLDGDELK-YFLQKFQSDARELTESETKSLMDA----ADNDGDGKIGADE 101
Query: 213 WKSFALS 219
++ S
Sbjct: 102 FQEMVHS 108
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 88 DDGLIHKEELRLALLKTTSG-ENLFLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLE 146
+DG + EEL AL N L+ + + K+ + F+ R I P+ +
Sbjct: 18 NDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRK-PIKTPTEQSK 76
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
+ +D AFR D G I+ ++RQ++ ++L D + +++ + GDG
Sbjct: 77 EMLD-AFRALDKEGNGTIQEAELRQLL--------LNLGDALTSSEVEELMKEVSVSGDG 127
Query: 207 KINREEW 213
IN E +
Sbjct: 128 AINYESF 134
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 115 VFDLFDE---KKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQ 171
V DL +E N IEF EF+ +S S E ++ AF+++D G I +++
Sbjct: 49 VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKH 108
Query: 172 MVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
++ + G L+D A +D + +DG G+IN +++ +
Sbjct: 109 VLTSI----GEKLTD----AEVDDMLREV-SDGSGEINIQQFAAL 144
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 69 INEVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFL---DRVFDLFDEKKNG 125
+N+ + L E F+ + + G I EL AL +++G L +++ ++D+ +G
Sbjct: 23 MNDNQELMEWFRAVDTD--GSGAISVPELNAAL--SSAGVPFSLATTEKLLHMYDKNHSG 78
Query: 126 VIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLS 185
I F+EF + H + + FR D G ++ +VR A L SG +S
Sbjct: 79 EITFDEFK---DLHHFILSMRE----GFRKRDSSGDGRLDSNEVR----AALLSSGYQVS 127
Query: 186 DESLKAIIDK 195
+++ +A++ K
Sbjct: 128 EQTFQALMRK 137
>pdb|2ZNN|A Chain A, Human Pprr Alpha Ligand Binding Domain In Complex With A
Synthetic Agonist Tipp703
pdb|3VI8|A Chain A, Human Pprr Alpha Ligand Binding Domain In Complex With A
Synthetic Agonist Aphm13
Length = 273
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 37 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 77
>pdb|3ET1|A Chain A, Structure Of Pparalpha With 3-[5-Methoxy-1-(4-Methoxy-
Benzenesulfonyl)-1h-Indol-3-Yl]-Propionic Acid
pdb|3ET1|B Chain B, Structure Of Pparalpha With 3-[5-Methoxy-1-(4-Methoxy-
Benzenesulfonyl)-1h-Indol-3-Yl]-Propionic Acid
Length = 291
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 55 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 95
>pdb|1KKQ|A Chain A, Crystal Structure Of The Human Ppar-Alpha Ligand-Binding
Domain In Complex With An Antagonist Gw6471 And A Smrt
Corepressor Motif
pdb|1KKQ|B Chain B, Crystal Structure Of The Human Ppar-Alpha Ligand-Binding
Domain In Complex With An Antagonist Gw6471 And A Smrt
Corepressor Motif
pdb|1KKQ|C Chain C, Crystal Structure Of The Human Ppar-Alpha Ligand-Binding
Domain In Complex With An Antagonist Gw6471 And A Smrt
Corepressor Motif
pdb|1KKQ|D Chain D, Crystal Structure Of The Human Ppar-Alpha Ligand-Binding
Domain In Complex With An Antagonist Gw6471 And A Smrt
Corepressor Motif
Length = 269
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 33 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 73
>pdb|3G8I|A Chain A, Aleglitazar, A New, Potent, And Balanced Ppar AlphaGAMMA
Agonist For The Treatment Of Type Ii Diabetes
Length = 270
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 34 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 74
>pdb|3SP6|A Chain A, Structural Basis For Iloprost As A Dual PparalphaDELTA
AGONIST
Length = 285
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 49 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 89
>pdb|1I7G|A Chain A, Crystal Structure Of The Ligand Binding Domain From
Human Ppar-Alpha In Complex With The Agonist Az 242
Length = 287
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 51 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 91
>pdb|2P54|A Chain A, A Crystal Structure Of Ppar Alpha Bound With Src1
Peptide And Gw735
pdb|3FEI|A Chain A, Design And Biological Evaluation Of Novel, Balanced Dual
PparaG AGONISTS
Length = 267
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 31 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 71
>pdb|2REW|A Chain A, Crystal Structure Of Pparalpha Ligand Binding Domain
With Bms-631707
pdb|3KDT|A Chain A, Crystal Structure Of Peroxisome
Proliferator-Activatedecepto (Pparalpha) Complex With
N-3-((2-(4-Chlorophenyl)-5-Methyl-
Oxazol-4-Yl)methoxy)benzyl)-N-(Methoxycarbonyl)glycine
pdb|3KDT|B Chain B, Crystal Structure Of Peroxisome
Proliferator-Activatedecepto (Pparalpha) Complex With
N-3-((2-(4-Chlorophenyl)-5-Methyl-
Oxazol-4-Yl)methoxy)benzyl)-N-(Methoxycarbonyl)glycine
pdb|3KDU|A Chain A, Crystal Structure Of Peroxisome
Proliferator-Activatedecepto (Pparalpha) Complex With
N-3-((2-(4-Chlorophenyl)-5-Methyl-
Oxazol-4-Yl)methoxy)benzyl)-N-((4-
Methylphenoxy)carbonyl)gl
pdb|3KDU|B Chain B, Crystal Structure Of Peroxisome
Proliferator-Activatedecepto (Pparalpha) Complex With
N-3-((2-(4-Chlorophenyl)-5-Methyl-
Oxazol-4-Yl)methoxy)benzyl)-N-((4-
Methylphenoxy)carbonyl)gl
Length = 277
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 41 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 81
>pdb|1K7L|A Chain A, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide.
pdb|1K7L|C Chain C, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide.
pdb|1K7L|E Chain E, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide.
pdb|1K7L|G Chain G, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide
Length = 288
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 60 RLANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+ +NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 52 KASNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 92
>pdb|3FD5|A Chain A, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Ampcp
pdb|3FD5|B Chain B, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Ampcp
pdb|3FD6|A Chain A, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Adp And Phosphate
pdb|3FD6|B Chain B, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Adp And Phosphate
Length = 394
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 144 PLEDKIDFAFRLY---DLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDK 195
P ++D +FRL +L+ TGC P+ V Q ++ +LQE+ ++ L A++ +
Sbjct: 11 PESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPR 65
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 111 FLDRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIE-PEQV 169
+ D VFD+FD+ +G I +E+ +A +P E+ + F+ DL +G ++ E
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMT 172
Query: 170 RQMV 173
RQ +
Sbjct: 173 RQHL 176
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 114 RVFDLFDE---KKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVR 170
V DL +E N IEF EF+ +S E ++ AF+++D G I +++
Sbjct: 48 EVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELK 107
Query: 171 QMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSF 216
++ + G L+D A +D+ + +DG G+IN +++ +
Sbjct: 108 HVLTSI----GEKLTD----AEVDEMLREV-SDGSGEINIKQFAAL 144
>pdb|2NPA|A Chain A, The Crystal Structure Of The Human Pparaplpha Ligand
Binding Domain In Complex With A A-Hydroxyimino
Phenylpropanoic Acid
pdb|2NPA|C Chain C, The Crystal Structure Of The Human Pparaplpha Ligand
Binding Domain In Complex With A A-Hydroxyimino
Phenylpropanoic Acid
Length = 270
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 62 ANNSPFTINEVEALYELFKELSSSLIDDGLIHKE-ELRL 99
+NN PF I+++E L K L + L+ +G+ +KE E+R+
Sbjct: 36 SNNPPFVIHDMETLCMAEKTLVAKLVANGIQNKEAEVRI 74
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR++D G I+ E+++ M+ AT G ++++ ++ ++ D D + DG+I+ +E
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 62
Query: 213 WKSF 216
+ F
Sbjct: 63 FLEF 66
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D + AF + ++G IE ++++ + + + L+D K + D+DGDG
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKA----GDSDGDG 95
Query: 207 KINREEW 213
KI +EW
Sbjct: 96 KIGVDEW 102
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR++D G I+ E+++ M+ AT G ++++ ++ ++ D D + DG+I+ +E
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 64
Query: 213 WKSF 216
+ F
Sbjct: 65 FLEF 68
>pdb|4B2X|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B2X|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B2X|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B2X|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B3U|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B42|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4B|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4G|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B4M|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4B5B|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLK|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|3ZLL|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
Length = 303
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 81 ELSSSLIDDGLIHKE---ELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALS 137
+LS+ ++ D L + EL + + +G ++F + + D ++ GV+EF++ +A+S
Sbjct: 112 DLSALVLGDNLYYGHDFHELLGSASQRQTGASVF---AYHVLDPERYGVVEFDQGGKAIS 168
Query: 138 IFHPSTPLEDKIDFA 152
+ PLE K ++A
Sbjct: 169 L--EEKPLEPKSNYA 181
>pdb|4ARW|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ARW|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ARW|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ARW|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
Length = 302
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 81 ELSSSLIDDGLIHKE---ELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALS 137
+LS+ ++ D L + EL + + +G ++F + + D ++ GV+EF++ +A+S
Sbjct: 111 DLSALVLGDNLYYGHDFHELLGSASQRQTGASVF---AYHVLDPERYGVVEFDQGGKAIS 167
Query: 138 IFHPSTPLEDKIDFA 152
+ PLE K ++A
Sbjct: 168 L--EEKPLEPKSNYA 180
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 24/74 (32%)
Query: 158 LRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEWKSFA 217
L+ G + P++VR+M+ A+ D DGDG I+ +E+ FA
Sbjct: 37 LKTLGSVTPDEVRRMM------------------------AEIDTDGDGFISFDEFTDFA 72
Query: 218 LSHPTLLKNMTLPF 231
++ L+K+++ F
Sbjct: 73 RANRGLVKDVSKIF 86
>pdb|1FXO|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FXO|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tmp Complex.
pdb|1FZW|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1FZW|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Apo Enzyme.
pdb|1G0R|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G0R|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). ThymidineGLUCOSE- 1-Phosphate Complex.
pdb|1G1L|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G1L|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-Glucose Complex.
pdb|1G2V|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G2V|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Ttp Complex.
pdb|1G3L|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|1G3L|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|1G3L|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|1G3L|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Tdp-L-Rhamnose Complex.
pdb|4ASJ|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASJ|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASJ|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASJ|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|A Chain A, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|B Chain B, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|C Chain C, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
pdb|4ASY|D Chain D, Pseudomonas Aeruginosa Rmla In Complex With Allosteric
Inhibitor
Length = 293
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 81 ELSSSLIDDGLIHKE---ELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALS 137
+LS+ ++ D L + EL + + +G ++F + + D ++ GV+EF++ +A+S
Sbjct: 102 DLSALVLGDNLYYGHDFHELLGSASQRQTGASVF---AYHVLDPERYGVVEFDQGGKAIS 158
Query: 138 IFHPSTPLEDKIDFA 152
+ PLE K ++A
Sbjct: 159 L--EEKPLEPKSNYA 171
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR++D G I+ E+++ M+ AT G ++++ ++ ++ D D + DG+I+ +E
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 67
Query: 213 WKSF 216
+ F
Sbjct: 68 FLEF 71
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8L|B Chain B, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8N|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
pdb|3O8N|B Chain B, Structure Of Phosphofructokinase From Rabbit Skeletal
Muscle
Length = 762
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 66 PFTINEVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLFLDRVFDLFDEKKNG 125
PFTI +++A E + + + GL+ + E EN D +F+L+ E+ G
Sbjct: 599 PFTIRDLQANVEHLVQKMKTTVKRGLVLRNE--------KCNENYTTDFIFNLYSEEGKG 650
Query: 126 VIEFEEFV 133
+ + + V
Sbjct: 651 IFDSRKNV 658
>pdb|1G23|A Chain A, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|B Chain B, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|C Chain C, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|D Chain D, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|E Chain E, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|F Chain F, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|G Chain G, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex.
pdb|1G23|H Chain H, The Structural Basis Of The Catalytic Mechanism And
Regulation Of Glucose-1-Phosphate Thymidylyltransferase
(Rmla). Glucose-1-Phosphate Complex
Length = 293
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 81 ELSSSLIDDGLIHKE---ELRLALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALS 137
+LS+ ++ D L + EL + + +G ++F + + D ++ GV+EF++ +A+S
Sbjct: 102 DLSALVLGDNLYYGHDFHELLGSASQRQTGASVF---AYHVLDPERYGVVEFDQGGKAIS 158
Query: 138 IFHPSTPLEDKIDFA 152
+ PLE K ++A
Sbjct: 159 L--EEKPLEPKSNYA 171
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 25/158 (15%)
Query: 68 TINEVEALYELFKELSSSLIDDGLIHKEEL-----RLALLKTTSGENL-------FLDRV 115
T+ E + L ++F++L ++ DG + ++EL +L K + +L +D +
Sbjct: 309 TLEETKELTQIFRQLDNN--GDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI 366
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
D +NG IE+ EFV + + +++ AF+ +D +G I E++ ++
Sbjct: 367 LQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV 425
Query: 176 TLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
T + DE+ ++ + D + DG+++ EE+
Sbjct: 426 T------EVDDETWHQVL----QECDKNNDGEVDFEEF 453
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR++D G I+ E+++ M LQ +G ++++ ++ ++ D D + DG+I+ +E
Sbjct: 21 FRMFDKNADGYIDLEELKIM----LQATGETITEDDIEELM----KDGDKNNDGRIDYDE 72
Query: 213 WKSF 216
+ F
Sbjct: 73 FLEF 76
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 68 TINEVEALYELFKELSSSLIDDGLIHKEEL-----RLALLKTTSGENL-------FLDRV 115
T+ E + L ++F++L ++ DG + ++EL +L K + +L +D +
Sbjct: 35 TLEETKELTQIFRQLDNN--GDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI 92
Query: 116 FDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVA 175
D +NG IE+ EFV + + +++ AF+ +D +G I E++ ++
Sbjct: 93 LQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV 151
Query: 176 TLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
T + DE+ ++ + D + DG+++ EE
Sbjct: 152 T------EVDDETWHQVL----QECDKNNDGEVDFEE 178
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 36 IFSLTGCFDHHCPPKLRYTFNDLVRLANNSPFTINEVEALYEL 78
IF L D P K + TF L+RL N +V + YEL
Sbjct: 265 IFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYEL 307
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 72 VEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGE--NLFLDRVFDLFDEKKNGVIEF 129
V+ L + F+E ++ DG I ELR A+ K + + ++ + D +G ++F
Sbjct: 101 VKELRDAFREFDTN--GDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDF 158
Query: 130 EEFVRALS 137
EEFVR +S
Sbjct: 159 EEFVRMMS 166
>pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 205
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
T L + + LY L+E IEPE Q+V ++L E
Sbjct: 61 TTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYE 97
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D + AF + D ++G IE ++++ + + + L+D K + D+DGDG
Sbjct: 42 DDVKKAFAIIDQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKA----GDSDGDG 96
Query: 207 KINREEW 213
KI +E+
Sbjct: 97 KIGVDEF 103
>pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
pdb|1VSY|J Chain J, Proteasome Activator Complex
pdb|1VSY|X Chain X, Proteasome Activator Complex
pdb|3L5Q|N Chain N, Proteasome Activator Complex
pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
Length = 204
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 143 TPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQE 179
T L + + LY L+E IEPE Q+V ++L E
Sbjct: 60 TTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYE 96
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 100 ALLKTTSGENLFLDRVFDLFDEKKNGVIEFEEFVRALSI 138
A LK + +L L +++DL D GV+ +EF AL +
Sbjct: 35 AFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 53 YTFNDLVRLANNSPFTI--NEVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGEN- 109
YT +L L+ P I +E+E + E FK +G I K+EL A+ N
Sbjct: 16 YTVPNL--LSEQRPVDIPEDELEEIREAFKVFDRD--GNGFISKQELGTAMRSLGYMPNE 71
Query: 110 LFLDRVFDLFDEKKNGVIEFEEFVRALS 137
+ L+ + D +G ++FEEFV L
Sbjct: 72 VELEVIIQRLDMDGDGQVDFEEFVTLLG 99
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
Query: 146 EDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFA------- 198
E +I F +D G I+ A L E G+ + +A+ A
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 199 DADADGDGKINREEWKSFALSH----PTLLKNMTLPFL 232
AD DGD +I REE+ + A+ P M PFL
Sbjct: 63 IADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFL 100
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 72 VEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGE--NLFLDRVFDLFDEKKNGVIEF 129
V+ L + F+E ++ DG I ELR A+ K + + ++ + D +G ++F
Sbjct: 87 VKELRDAFREFDTN--GDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDF 144
Query: 130 EEFVRALS 137
EEFVR +S
Sbjct: 145 EEFVRMMS 152
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR++D G I+ E++ +++ AT G H+ +E ++ ++ D+D + DG+I+ +E
Sbjct: 16 FRIFDKNADGFIDIEELGEILRAT----GEHVIEEDIEDLM----KDSDKNNDGRIDFDE 67
Query: 213 W 213
+
Sbjct: 68 F 68
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 146 EDKIDF--AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADAD 203
E +DF AF L+D GCI E++ ++ + Q + ++E L+ +I ++ DAD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQ----NPTEEELQDMI----SEVDAD 58
Query: 204 GDGKINREEWKSF 216
G+G I +E+ S
Sbjct: 59 GNGTIEFDEFLSL 71
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 149 IDF--AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
+DF AF L+D GCI E++ ++ + Q + ++E L+ +I ++ DADG+G
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQ----NPTEEELQDMI----SEVDADGNG 61
Query: 207 KINREEWKSF 216
I +E+ S
Sbjct: 62 TIEFDEFLSL 71
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 152 AFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINRE 211
AFR +D G I ++R+ + A L G + ++ II D D +GDG+++ E
Sbjct: 93 AFREFDTNGDGEISTSELREAMRALL---GHQVGHRDIEEII----RDVDLNGDGRVDFE 145
Query: 212 EW 213
E+
Sbjct: 146 EF 147
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 72 VEALYELFKELSSSLIDDGLIHKEELR---LALLKTTSGENLFLDRVFDLFDEKKNGVIE 128
V+ L + F+E ++ DG I ELR ALL G + + D+ D +G ++
Sbjct: 87 VKELRDAFREFDTN--GDGEISTSELREAMRALLGHQVGHRDIEEIIRDV-DLNGDGRVD 143
Query: 129 FEEFVRALS 137
FEEFVR +S
Sbjct: 144 FEEFVRMMS 152
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
FR++D G I+ ++++ M+ AT G ++++ ++ ++ D D + DG+I+ +E
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQAT----GETITEDDIEELM----KDGDKNNDGRIDYDE 63
Query: 213 WKSF 216
+ F
Sbjct: 64 FLEF 67
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 20/146 (13%)
Query: 67 FTINEVEALYELFKELSSSLID---DGLIHKEELRLALLKTTSGENLFLDRVFDLFDEKK 123
FT ++V+ E F+ LID DG I K ++R S L ++ D +
Sbjct: 51 FTQHQVQEFKEAFQ-----LIDQDKDGFISKNDIRATF---DSLGRLCTEQELDSMVAEA 102
Query: 124 NGVIEFEEFVRALSIFHPSTPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMH 183
G I F F+ T ED I AF L+D + C E TL+ S
Sbjct: 103 PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEE---------TLKRSLTT 153
Query: 184 LSDESLKAIIDKTFADADADGDGKIN 209
++ + +D+ ++A DG+G I+
Sbjct: 154 WGEKFSQDEVDQALSEAPIDGNGLID 179
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 72 VEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGE--NLFLDRVFDLFDEKKNGVIEF 129
V+ L + F+E ++ DG I ELR A+ K + + ++ + D +G ++F
Sbjct: 6 VKELRDAFREFDTN--GDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDF 63
Query: 130 EEFVRALS 137
EEFVR +S
Sbjct: 64 EEFVRMMS 71
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 114 RVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDF 151
RVF+ FD+ K+G + +EF F P ED + F
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF 42
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 147 DKIDFAFRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDG 206
D + AF + ++G IE ++++ + + + L+D K + D+DGDG
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKA----GDSDGDG 95
Query: 207 KINREEW 213
KI ++W
Sbjct: 96 KIGVDDW 102
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 24/145 (16%)
Query: 72 VEALYELFKELSSSLIDDGL--IHKEELRLALLKTTSGENLFLDR-----VFDLFDEKKN 124
++ L F++L DG + +E R L K L LD+ V +D +
Sbjct: 36 IQGLARFFRQLDR----DGSRSLDADEFRQGLAKL----GLVLDQAEAEGVCRKWDRNGS 87
Query: 125 GVIEFEEFVRALSIFHP--STPLEDKIDFAFRLYDLRETGCIEPEQVRQMVVATLQ---E 179
G ++ EEF+RAL P S E I AF D G + + +R +
Sbjct: 88 GTLDLEEFLRAL---RPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVR 144
Query: 180 SGMHLSDESLKAIIDKTFADADADG 204
SG DE L+ +D F ++ DG
Sbjct: 145 SGEWTEDEVLRRFLD-NFDSSEKDG 168
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 113 DRVFDLFDEKKNGVIEFEEFVRALSIFHPSTPLEDKIDF-AFRLYDLRETGCIEPEQVRQ 171
D + D D +G I++ EF+ A L K+ + AFR++D+ G I ++
Sbjct: 93 DLLLDQIDSDGSGNIDYTEFLAAAI---DRRQLSKKLIYCAFRVFDVDNDGEITTAELAH 149
Query: 172 MVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREEW 213
++ + + D + + K + D +GDGKI+ E+
Sbjct: 150 VLFNGNKRGNITERDVNQ---VKKMIREVDKNGDGKIDFYEF 188
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 71 EVEALYELFKELSSSLIDDGLIHKEELRLALLKTTSGENLF-----LDRVFDLFDEKKNG 125
E++ +E+F ++ D I KEEL+L + T G +L LD + + D+ +G
Sbjct: 6 EIKGAFEVF---AAKEGDPNQISKEELKLVM--QTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 126 VIEFEEFV 133
+ FEEF+
Sbjct: 61 EVSFEEFL 68
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 26.9 bits (58), Expect = 9.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 153 FRLYDLRETGCIEPEQVRQMVVATLQESGMHLSDESLKAIIDKTFADADADGDGKINREE 212
F+ D+ G + E+V+ V + +E L +I F DADG+G+I++ E
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFV-----SKKRAIKNEQLLQLI---FKSIDADGNGEIDQNE 57
Query: 213 WKSF 216
+ F
Sbjct: 58 FAKF 61
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,644,883
Number of Sequences: 62578
Number of extensions: 314911
Number of successful extensions: 1503
Number of sequences better than 100.0: 255
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 1097
Number of HSP's gapped (non-prelim): 385
length of query: 255
length of database: 14,973,337
effective HSP length: 97
effective length of query: 158
effective length of database: 8,903,271
effective search space: 1406716818
effective search space used: 1406716818
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)