Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>025242
MSEQGESTPTVAAAPAITTRTKDAKEWVEDLQRSVIQSKDSAIRSARSFQHNSSTYLQTL
QDFVLHGVSQYQTYEDAFFSKVKDELVSAREHPAAATGVALTAGLLFMRGPRRFLFRHTF
GRLRSEEAMFVRAEKNVNELNLSGELMKKESKKLLERAALAEKEMIRGETELKNAGNQVQ
RLAKQVYKVETQAAGIVGCIFFSSIMIVVGKTVVGNLSDMVDNFNMQDKIFLTILICDRK
GSSLFHGSHLILDFS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025242
        (255 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2131473 - symbol:AT4G26410 "AT4G26410" species...   458  2.2e-43   1
TAIR|locus:2055578 - symbol:AT2G45060 "AT2G45060" species...   207  8.6e-17   1


>TAIR|locus:2131473 [details] [associations]
            symbol:AT4G26410 "AT4G26410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA]
            GO:GO:0005739 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:BT002964
            EMBL:BT004440 IPI:IPI00521531 RefSeq:NP_194371.2 UniGene:At.46172
            PRIDE:Q84K90 EnsemblPlants:AT4G26410.1 GeneID:828747
            KEGG:ath:AT4G26410 TAIR:At4g26410 InParanoid:Q84K90 OMA:PRRFLFR
            PhylomeDB:Q84K90 ProtClustDB:CLSN2680097 Genevestigator:Q84K90
            InterPro:IPR016803 PIRSF:PIRSF022280 Uniprot:Q84K90
        Length = 263

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 89/174 (51%), Positives = 121/174 (69%)

Query:    24 AKEWVEDLQRSVIQSKDSAIRSARSFQHNSSTYLQTLQDFVLHGVSQYQTYEDAFFSKVK 83
             A++WV DLQR+V +SKD+A+RSARS + NS++  +++QDF+ H ++QY+TYE+AFFSKV 
Sbjct:    44 AEKWVGDLQRTVKESKDTAMRSARSLRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVT 103

Query:    84 DELVSAREHPXXXXXXXXXXXXXFMRGPRRFLFRHTFGRLRSEEAMFVRAEKNVNELNXX 143
             DEL+ A+EHP              MRGPRRFLFR+T GR +SEEA F++AEK+V ELN  
Sbjct:   104 DELIYAKEHPAAAIGIGVAASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMS 163

Query:   144 XXXXXXXXXXXXXRAALAEKEMIRGETELKNAGNQVQRLAKQVYKVETQAAGIV 197
                          R ALAEK+M RG +EL N+GN + RLAK V+K E +AA ++
Sbjct:   164 VDLMKKESRKLLERTALAEKDMKRGLSELMNSGNDIHRLAKSVHKAECEAADLM 217


>TAIR|locus:2055578 [details] [associations]
            symbol:AT2G45060 "AT2G45060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006007
            "glucose catabolic process" evidence=RCA] GO:GO:0005739
            EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR016803
            PIRSF:PIRSF022280 EMBL:AY045585 EMBL:AY085438 EMBL:AY143908
            IPI:IPI00521606 RefSeq:NP_566034.1 UniGene:At.26163 PaxDb:Q94AZ5
            PRIDE:Q94AZ5 EnsemblPlants:AT2G45060.1 GeneID:819113
            KEGG:ath:AT2G45060 TAIR:At2g45060 eggNOG:NOG318876
            HOGENOM:HOG000005752 InParanoid:Q94AZ5 OMA:ISNYGIS PhylomeDB:Q94AZ5
            ProtClustDB:CLSN2688937 Genevestigator:Q94AZ5 Uniprot:Q94AZ5
        Length = 272

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 55/186 (29%), Positives = 86/186 (46%)

Query:    22 KDAKEWVEDL-------QRSVIQSKDSAIRS--ARSFQHNSSTYLQTLQ--DFVLHGVSQ 70
             ++A  W++D        Q+++ ++ DS I +  AR  Q   ++   T Q  D +    S+
Sbjct:    40 ENAASWIDDALRQALVYQKTITETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIASE 99

Query:    71 YQTYEDAFFSKVKDELVSAREHPXXXXXXXXXXXXXFMRGPRRFLFRHTFGRLRSEEAMF 130
             Y  YE   F K+KD +  A  HP              ++  RRF++ +T     SEEA+ 
Sbjct:   100 YNVYEQMVFGKIKDGVNVAASHPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEALL 159

Query:   131 VRAEKNVNELNXXXXXXXXXXXXXXXRAALAEKEMIRGETELKNAGNQVQRLAKQVYKVE 190
              RA+  V EL                 A +AE+E IRG  +L+ AG Q++      YK+E
Sbjct:   160 SRADLKVKELRQSMDRLKAESEKLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYKIE 219

Query:   191 TQAAGI 196
              QAAG+
Sbjct:   220 KQAAGL 225


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      255       213   0.00084  112 3  11 22  0.47    32
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.27u 0.11s 16.38t   Elapsed:  00:00:01
  Total cpu time:  16.27u 0.11s 16.38t   Elapsed:  00:00:01
  Start:  Thu May  9 23:15:33 2013   End:  Thu May  9 23:15:34 2013

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