Query 025245
Match_columns 255
No_of_seqs 218 out of 1319
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 06:33:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2haq_A Cyclophilin; rotamase, 100.0 1.7E-54 5.7E-59 365.6 19.6 166 85-251 7-172 (172)
2 3ich_A Peptidyl-prolyl CIS-tra 100.0 5.1E-54 1.7E-58 367.4 19.7 169 85-253 11-179 (188)
3 4fru_A Cyclophilin B, peptidyl 100.0 6.2E-54 2.1E-58 366.1 20.1 170 85-254 8-177 (185)
4 1a58_A Cyclophilin; isomerase, 100.0 1.2E-53 4.1E-58 362.0 21.7 165 87-252 4-177 (177)
5 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.2E-53 4.1E-58 360.4 21.3 166 86-252 7-172 (172)
6 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.4E-53 4.9E-58 362.1 21.5 163 88-251 8-179 (179)
7 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.5E-53 5.1E-58 357.7 21.3 163 89-252 3-165 (165)
8 3pmp_A Cyclophilin A; peptidyl 100.0 1.8E-53 6E-58 356.9 21.1 163 89-252 2-164 (164)
9 2he9_A NK-tumor recognition pr 100.0 2.2E-53 7.5E-58 364.5 21.4 169 84-253 14-191 (192)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.8E-53 9.4E-58 358.6 21.6 165 87-252 9-173 (173)
11 2igv_A Peptidyl-prolyl CIS-tra 100.0 2.8E-53 9.7E-58 358.5 20.5 164 88-252 2-172 (173)
12 1qng_A Peptidyl-prolyl CIS-tra 100.0 3.5E-53 1.2E-57 357.1 19.7 162 88-251 2-170 (170)
13 3rdd_A Peptidyl-prolyl CIS-tra 100.0 4.4E-53 1.5E-57 360.5 20.5 171 81-252 14-184 (184)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 1E-52 3.5E-57 356.3 19.4 164 88-251 9-177 (177)
15 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.3E-52 4.3E-57 358.1 19.9 164 86-250 16-186 (186)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 5.2E-52 1.8E-56 356.3 21.2 166 87-253 25-192 (193)
17 2c3b_A Ppiase, cyclophilin; is 100.0 2.5E-52 8.6E-57 352.4 14.9 163 88-251 2-172 (172)
18 1z81_A Cyclophilin; structural 100.0 6.8E-51 2.3E-55 357.0 19.0 165 87-251 57-229 (229)
19 2ose_A Probable peptidyl-proly 100.0 7.3E-50 2.5E-54 352.0 17.6 165 87-253 12-208 (234)
20 2poe_A Cyclophilin-like protei 100.0 4.3E-48 1.5E-52 329.9 17.0 155 93-252 16-175 (185)
21 1ihg_A Cyclophilin 40; ppiase 100.0 1.4E-47 4.7E-52 355.4 20.7 164 89-253 15-186 (370)
22 2ok3_A Peptidyl-prolyl CIS-tra 100.0 9E-48 3.1E-52 321.4 17.5 149 101-253 7-157 (161)
23 2fu0_A Cyclophilin, putative; 100.0 1E-47 3.5E-52 320.8 17.1 149 100-252 11-160 (160)
24 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.7E-47 5.6E-52 321.3 18.0 154 89-251 11-165 (166)
25 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1E-46 3.4E-51 324.0 19.9 149 101-253 26-176 (197)
26 2b71_A Cyclophilin-like protei 100.0 7.3E-47 2.5E-51 324.8 18.6 156 89-253 38-194 (196)
27 2a2n_A Peptidylprolyl isomeras 100.0 7.4E-47 2.5E-51 320.0 16.5 147 100-250 27-175 (176)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.3E-46 4.6E-51 324.5 17.0 156 89-253 11-167 (203)
29 1w74_A Peptidyl-prolyl CIS-tra 100.0 3E-46 1E-50 319.9 18.7 146 101-251 30-191 (191)
30 3bo7_A Peptidyl-prolyl CIS-tra 100.0 3E-46 1E-50 322.4 18.6 149 101-253 13-174 (201)
31 2hq6_A Serologically defined c 100.0 1.5E-45 5.2E-50 314.2 17.9 160 84-253 19-181 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 9.4E-45 3.2E-49 304.5 16.2 154 88-252 3-166 (166)
33 1lop_A Cyclophilin A; rotamase 100.0 5.8E-45 2E-49 305.2 13.5 146 100-252 5-164 (164)
34 3bkp_A Cyclophilin; malaria, i 100.0 2.3E-44 7.9E-49 316.5 16.8 161 83-253 15-194 (232)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 6.1E-44 2.1E-48 299.8 15.9 144 101-251 10-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.5E-37 1.2E-41 285.8 8.3 141 86-231 165-345 (369)
37 3kop_A Uncharacterized protein 91.7 0.99 3.4E-05 37.6 9.0 32 93-126 23-55 (188)
38 2nnz_A Hypothetical protein; b 90.9 0.38 1.3E-05 38.9 5.6 98 104-229 39-143 (153)
39 1zx8_A Hypothetical protein TM 58.0 34 0.0012 26.8 7.1 94 104-229 22-124 (136)
No 1
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.7e-54 Score=365.56 Aligned_cols=166 Identities=63% Similarity=1.086 Sum_probs=161.1
Q ss_pred cccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccc
Q 025245 85 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI 164 (255)
Q Consensus 85 ~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~ 164 (255)
++.+++++||||.+++|+.|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||+..++++|+.++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (172)
T 2haq_A 7 EPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSI 86 (172)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCS
T ss_pred CCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccc
Confidence 57789999999999999999999999999999999999999998899999999999999999999999888889999999
Q ss_pred cCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeE
Q 025245 165 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCR 244 (255)
Q Consensus 165 ~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~ 244 (255)
||..|++|++.++|. +|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|++++++.+++|.++|+
T Consensus 87 ~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~ 165 (172)
T 2haq_A 87 YGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVK 165 (172)
T ss_dssp SSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEE
T ss_pred cCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeE
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEe
Q 025245 245 IINSGEL 251 (255)
Q Consensus 245 I~~cGvL 251 (255)
|.+||+|
T Consensus 166 I~~~g~l 172 (172)
T 2haq_A 166 IVASGEL 172 (172)
T ss_dssp EEEEEEC
T ss_pred EEEeEEC
Confidence 9999997
No 2
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.1e-54 Score=367.37 Aligned_cols=169 Identities=63% Similarity=1.076 Sum_probs=162.9
Q ss_pred cccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccc
Q 025245 85 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI 164 (255)
Q Consensus 85 ~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~ 164 (255)
.+.+++++||||++++|+.|+|+||||.+.||+||+||++||+|++|++|+|+.||||+++|||||||+..++|+|+.++
T Consensus 11 ~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 90 (188)
T 3ich_A 11 GPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI 90 (188)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred CCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccc
Confidence 46789999999999999999999999999999999999999998889889999999999999999999877899999999
Q ss_pred cCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeE
Q 025245 165 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCR 244 (255)
Q Consensus 165 ~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~ 244 (255)
||..|++|++.++|.++|+|||||.++++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+
T Consensus 91 ~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~ 170 (188)
T 3ich_A 91 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVI 170 (188)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred cCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEecC
Q 025245 245 IINSGELPL 253 (255)
Q Consensus 245 I~~cGvL~~ 253 (255)
|.+||+|+.
T Consensus 171 I~~~~~l~~ 179 (188)
T 3ich_A 171 IADCGKIEV 179 (188)
T ss_dssp EEEEEEEEE
T ss_pred EEEeEEEec
Confidence 999999853
No 3
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=6.2e-54 Score=366.11 Aligned_cols=170 Identities=62% Similarity=1.076 Sum_probs=163.5
Q ss_pred cccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccc
Q 025245 85 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI 164 (255)
Q Consensus 85 ~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~ 164 (255)
.+.++++|||||++++++.|+|+||||++.||+||+||++||++++|++|+|+.|||++++|||||||++.+++.|+.++
T Consensus 8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 87 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSI 87 (185)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccc
Confidence 47789999999999999999999999999999999999999998778559999999999999999999998899999999
Q ss_pred cCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeE
Q 025245 165 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCR 244 (255)
Q Consensus 165 ~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~ 244 (255)
|+..|++|++.++|.++|+|+|||.++++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+
T Consensus 88 ~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~ 167 (185)
T 4fru_A 88 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVT 167 (185)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred cCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEecCC
Q 025245 245 IINSGELPLD 254 (255)
Q Consensus 245 I~~cGvL~~~ 254 (255)
|.+||+|+++
T Consensus 168 I~~~g~l~~~ 177 (185)
T 4fru_A 168 IADCGKIEVE 177 (185)
T ss_dssp EEEEEEEEEE
T ss_pred EEEceEEecC
Confidence 9999999653
No 4
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.2e-53 Score=362.00 Aligned_cols=165 Identities=59% Similarity=0.981 Sum_probs=157.8
Q ss_pred cccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCC---------cccCCCEEEEeecCceeeeCCCcCCC
Q 025245 87 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGD 157 (255)
Q Consensus 87 ~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~f~Rii~~f~iqgGd~~~~~ 157 (255)
..+++|||||++++++.|+|+||||++.||+||+||++||+++++ + |+|+.||||+|+|||||||++.++
T Consensus 4 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~ 82 (177)
T 1a58_A 4 KDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNFMIQGGDFTKGD 82 (177)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTTEEEECCCSSSS
T ss_pred CCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCCEEEeCCccCCC
Confidence 357899999999999999999999999999999999999997543 4 999999999999999999998889
Q ss_pred CCCCccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCC
Q 025245 158 GTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTD 237 (255)
Q Consensus 158 g~g~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~ 237 (255)
++|+.++||..|++|++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.++
T Consensus 83 g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~ 162 (177)
T 1a58_A 83 GTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKN 162 (177)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeEEec
Q 025245 238 YPKVPCRIINSGELP 252 (255)
Q Consensus 238 ~P~~~V~I~~cGvL~ 252 (255)
+|.++|+|.+||+|.
T Consensus 163 ~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 163 RPLADVVILNCGELV 177 (177)
T ss_dssp CBSSCEEEEEEEEEC
T ss_pred cCCCCeEEEEeEEEC
Confidence 999999999999983
No 5
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.2e-53 Score=360.43 Aligned_cols=166 Identities=63% Similarity=1.102 Sum_probs=157.8
Q ss_pred ccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCcccc
Q 025245 86 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 165 (255)
Q Consensus 86 ~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~ 165 (255)
+..++++|||+++++|+.|+|+||||++.||+||+||++||++++|++|+|+.||||+|+|||||||+..++|+|+.++|
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~ 86 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIY 86 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccC
Confidence 45678999999999999999999999999999999999999987888899999999999999999999888899999999
Q ss_pred CCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEE
Q 025245 166 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRI 245 (255)
Q Consensus 166 g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I 245 (255)
+..|++|++.++|.++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ .+++|.++|+|
T Consensus 87 g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I 165 (172)
T 2cmt_A 87 GRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS-KSGKVKEPVII 165 (172)
T ss_dssp BSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC-TTCCCSSCEEE
T ss_pred CCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 46899999999
Q ss_pred EeeEEec
Q 025245 246 INSGELP 252 (255)
Q Consensus 246 ~~cGvL~ 252 (255)
.+||+|.
T Consensus 166 ~~~g~l~ 172 (172)
T 2cmt_A 166 SRCGELI 172 (172)
T ss_dssp EEEEEEC
T ss_pred EEeEeEC
Confidence 9999984
No 6
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.4e-53 Score=362.10 Aligned_cols=163 Identities=60% Similarity=1.014 Sum_probs=157.2
Q ss_pred ccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCC---------cccCCCEEEEeecCceeeeCCCcCCCC
Q 025245 88 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGDG 158 (255)
Q Consensus 88 ~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~f~Rii~~f~iqgGd~~~~~g 158 (255)
.+++|||||++++|+.|+|+||||++.||+||+||++||+|+++ + |+|+.||||+|+|||||||++.+++
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g 86 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDFSEGNG 86 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCCEEEcccccCCCC
Confidence 57899999999999999999999999999999999999987654 4 9999999999999999999988899
Q ss_pred CCCccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCC
Q 025245 159 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDY 238 (255)
Q Consensus 159 ~g~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~ 238 (255)
+++.++||..|++|++.++|+++|+|||||.+|++++|||||++.++||||++|+|||+|++|||||++|++++++.+++
T Consensus 87 ~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~ 166 (179)
T 2wfi_A 87 RGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASK 166 (179)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSC
T ss_pred CCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeeEEe
Q 025245 239 PKVPCRIINSGEL 251 (255)
Q Consensus 239 P~~~V~I~~cGvL 251 (255)
|.++|+|.+||+|
T Consensus 167 P~~~v~I~~~G~l 179 (179)
T 2wfi_A 167 PFAEVRILSCGEL 179 (179)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999997
No 7
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.5e-53 Score=357.74 Aligned_cols=163 Identities=67% Similarity=1.144 Sum_probs=157.3
Q ss_pred cceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCC
Q 025245 89 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS 168 (255)
Q Consensus 89 ~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~ 168 (255)
++++|||+++++|+.|+|+||||++.||+||+||++||+|+++++|+|+.||||+|+||+||||++.++++|+.++|+..
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 82 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR 82 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCc
Confidence 67999999999999999999999999999999999999998999999999999999999999999888899999999999
Q ss_pred CCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEee
Q 025245 169 FEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINS 248 (255)
Q Consensus 169 ~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~c 248 (255)
|++|++.++|.++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ .+++|.++|+|.+|
T Consensus 83 f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~~ 161 (165)
T 2z6w_A 83 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVITDC 161 (165)
T ss_dssp BCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEE
T ss_pred ccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEEEe
Confidence 99999999999899999999999999999999999999999999999999999999999999985 78999999999999
Q ss_pred EEec
Q 025245 249 GELP 252 (255)
Q Consensus 249 GvL~ 252 (255)
|+|.
T Consensus 162 g~l~ 165 (165)
T 2z6w_A 162 GQLS 165 (165)
T ss_dssp EECC
T ss_pred EEEC
Confidence 9984
No 8
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.8e-53 Score=356.95 Aligned_cols=163 Identities=56% Similarity=1.014 Sum_probs=157.3
Q ss_pred cceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCC
Q 025245 89 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS 168 (255)
Q Consensus 89 ~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~ 168 (255)
+++|||||.+++|+.|+|+||||++.||+||+||++||+|++|++|+|+.|||++|+||+||||+..+++.|+.++|+..
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 81 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEK 81 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcc
Confidence 57899999999999999999999999999999999999998999999999999999999999998888999999999999
Q ss_pred CCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEee
Q 025245 169 FEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINS 248 (255)
Q Consensus 169 ~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~c 248 (255)
|++|++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ +++|.++|+|.+|
T Consensus 82 ~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~c 160 (164)
T 3pmp_A 82 FADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITDC 160 (164)
T ss_dssp BCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEE
T ss_pred ccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999999986 7899999999999
Q ss_pred EEec
Q 025245 249 GELP 252 (255)
Q Consensus 249 GvL~ 252 (255)
|+|.
T Consensus 161 g~l~ 164 (164)
T 3pmp_A 161 GTVA 164 (164)
T ss_dssp EEC-
T ss_pred eEEC
Confidence 9984
No 9
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-53 Score=364.46 Aligned_cols=169 Identities=51% Similarity=0.929 Sum_probs=157.8
Q ss_pred ccccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCC---------cccCCCEEEEeecCceeeeCCCc
Q 025245 84 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFT 154 (255)
Q Consensus 84 ~~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~f~Rii~~f~iqgGd~~ 154 (255)
+....+++|||||++++|+.|+|+||||++.||+||+||++||+|+++ + |+|+.||||+|+|||||||++
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgGd~~ 92 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGGDFS 92 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCCEEEcCccc
Confidence 345678999999999999999999999999999999999999987654 4 999999999999999999998
Q ss_pred CCCCCCCccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCC
Q 025245 155 EGDGTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETS 234 (255)
Q Consensus 155 ~~~g~g~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~ 234 (255)
.+++.|+.++||..|++|++.++|+++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++
T Consensus 93 ~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~ 172 (192)
T 2he9_A 93 EGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTD 172 (192)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCeEEEeeEEecC
Q 025245 235 RTDYPKVPCRIINSGELPL 253 (255)
Q Consensus 235 ~~~~P~~~V~I~~cGvL~~ 253 (255)
.+++|.++|+|.+||+|..
T Consensus 173 ~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 173 AASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp TTSCBSSCEEEEEEEECC-
T ss_pred CCCCCcCCeEEEEeEEEcc
Confidence 9999999999999999863
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.8e-53 Score=358.58 Aligned_cols=165 Identities=60% Similarity=1.042 Sum_probs=157.8
Q ss_pred cccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccC
Q 025245 87 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYG 166 (255)
Q Consensus 87 ~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g 166 (255)
..++++|||+++++|+.|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||++.++++|+.++|+
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g 88 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYG 88 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCC
Confidence 45789999999999999999999999999999999999999888988999999999999999999998889999999999
Q ss_pred CCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 025245 167 SSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 246 (255)
Q Consensus 167 ~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~ 246 (255)
..|++|++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ +++|.++|+|.
T Consensus 89 ~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I~ 167 (173)
T 2r99_A 89 KKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVIIA 167 (173)
T ss_dssp SCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEE
T ss_pred CcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999875 58999999999
Q ss_pred eeEEec
Q 025245 247 NSGELP 252 (255)
Q Consensus 247 ~cGvL~ 252 (255)
+||+|.
T Consensus 168 ~cG~l~ 173 (173)
T 2r99_A 168 DCGEYV 173 (173)
T ss_dssp EEEECC
T ss_pred EeeeEC
Confidence 999984
No 11
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=2.8e-53 Score=358.52 Aligned_cols=164 Identities=66% Similarity=1.149 Sum_probs=156.4
Q ss_pred ccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCc-------ccCCCEEEEeecCceeeeCCCcCCCCCC
Q 025245 88 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-------GYKGCSFHRIIKDFMIQGGDFTEGDGTG 160 (255)
Q Consensus 88 ~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~-------~Y~g~~f~Rii~~f~iqgGd~~~~~g~g 160 (255)
.+++||||+++++++.|+|+||||++.||+||+||++||++++|+ +|+|+.||||+|+|||||||+..++|+|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 367999999999999999999999999999999999999987773 2999999999999999999998889999
Q ss_pred CccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 025245 161 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 240 (255)
Q Consensus 161 ~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~ 240 (255)
+.++|+..|++|++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ .+++|.
T Consensus 82 g~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~ 160 (173)
T 2igv_A 82 GESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKPV 160 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCS
T ss_pred CCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 568999
Q ss_pred CCeEEEeeEEec
Q 025245 241 VPCRIINSGELP 252 (255)
Q Consensus 241 ~~V~I~~cGvL~ 252 (255)
++|+|.+||+|+
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEEEc
Confidence 999999999986
No 12
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=3.5e-53 Score=357.07 Aligned_cols=162 Identities=60% Similarity=1.037 Sum_probs=155.3
Q ss_pred ccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcc-------cCCCEEEEeecCceeeeCCCcCCCCCC
Q 025245 88 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDGTG 160 (255)
Q Consensus 88 ~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~-------Y~g~~f~Rii~~f~iqgGd~~~~~g~g 160 (255)
.+++||||+++++++.|+|+||||++.||+||+||++||+|+ +++ |+|+.||||+|+|||||||+..++++|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 468999999999999999999999999999999999999855 554 999999999999999999998889999
Q ss_pred CccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 025245 161 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 240 (255)
Q Consensus 161 ~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~ 240 (255)
+.++|+..|++|++.++|+++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ ++++|.
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~ 159 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVK 159 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 789999
Q ss_pred CCeEEEeeEEe
Q 025245 241 VPCRIINSGEL 251 (255)
Q Consensus 241 ~~V~I~~cGvL 251 (255)
++|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeceeC
Confidence 99999999997
No 13
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=4.4e-53 Score=360.53 Aligned_cols=171 Identities=60% Similarity=1.061 Sum_probs=158.9
Q ss_pred hhhccccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCC
Q 025245 81 DVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTG 160 (255)
Q Consensus 81 ~~~~~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g 160 (255)
+...++..+++||||+++++++.|+|+||||++.||+||+||++||++++|++|+|+.||||+|+|||||||+..+++.+
T Consensus 14 ~~~~~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 93 (184)
T 3rdd_A 14 NLYFQGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTG 93 (184)
T ss_dssp -------CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCcccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCC
Confidence 34556678899999999999999999999999999999999999999888888999999999999999999988889999
Q ss_pred CccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 025245 161 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 240 (255)
Q Consensus 161 ~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~ 240 (255)
+.++|+..|++|++.++|.++|+|+||+.+|++++|||||++.++++||++|+|||+|++|||||++|+++++ ++++|.
T Consensus 94 g~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~g~P~ 172 (184)
T 3rdd_A 94 GKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGKTS 172 (184)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCS
T ss_pred CcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC-CCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 578999
Q ss_pred CCeEEEeeEEec
Q 025245 241 VPCRIINSGELP 252 (255)
Q Consensus 241 ~~V~I~~cGvL~ 252 (255)
++|+|.+||+|+
T Consensus 173 ~~v~I~~cG~l~ 184 (184)
T 3rdd_A 173 KKITIADCGQLE 184 (184)
T ss_dssp SCEEEEEEEECC
T ss_pred CCeEEEeCeEEC
Confidence 999999999985
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1e-52 Score=356.28 Aligned_cols=164 Identities=61% Similarity=1.062 Sum_probs=156.7
Q ss_pred ccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCc-----ccCCCEEEEeecCceeeeCCCcCCCCCCCc
Q 025245 88 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-----GYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 162 (255)
Q Consensus 88 ~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~-----~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~ 162 (255)
.++++|||+++++|+.|+|+||||++.||+||+||++||+++.+. +|+|+.||||+|+|||||||+..++|+|+.
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~ 88 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVA 88 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCC
Confidence 478999999999999999999999999999999999999855431 399999999999999999999888999999
Q ss_pred cccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCC
Q 025245 163 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVP 242 (255)
Q Consensus 163 ~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~ 242 (255)
++||..|++|++.++|+++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.++
T Consensus 89 si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~ 168 (177)
T 1mzw_A 89 SIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLP 168 (177)
T ss_dssp CTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSC
T ss_pred ccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeEEe
Q 025245 243 CRIINSGEL 251 (255)
Q Consensus 243 V~I~~cGvL 251 (255)
|+|.+||+|
T Consensus 169 v~I~~cG~l 177 (177)
T 1mzw_A 169 VVISQCGEM 177 (177)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeceeC
Confidence 999999997
No 15
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.3e-52 Score=358.13 Aligned_cols=164 Identities=63% Similarity=1.046 Sum_probs=155.5
Q ss_pred ccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcc-------cCCCEEEEeecCceeeeCCCcCCCC
Q 025245 86 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDG 158 (255)
Q Consensus 86 ~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~-------Y~g~~f~Rii~~f~iqgGd~~~~~g 158 (255)
...++++|||+++++++.|+|+||||++.||+||+||++||+|++|++ |+|+.||||+|+|||||||++.++|
T Consensus 16 ~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 16 FQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 456889999999999999999999999999999999999999888885 9999999999999999999988899
Q ss_pred CCCccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCC
Q 025245 159 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDY 238 (255)
Q Consensus 159 ~g~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~ 238 (255)
+|+.++||..|++|++.++|.++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ .+++
T Consensus 96 ~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~ 174 (186)
T 2poy_A 96 TGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNGK 174 (186)
T ss_dssp SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSC
T ss_pred CCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 6789
Q ss_pred CCCCeEEEeeEE
Q 025245 239 PKVPCRIINSGE 250 (255)
Q Consensus 239 P~~~V~I~~cGv 250 (255)
|.++|+|.+||+
T Consensus 175 P~~~v~I~~cG~ 186 (186)
T 2poy_A 175 PTKSVCITASGV 186 (186)
T ss_dssp CSSCEEEEEEEC
T ss_pred CCCCEEEEeCCC
Confidence 999999999996
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=5.2e-52 Score=356.26 Aligned_cols=166 Identities=54% Similarity=0.898 Sum_probs=158.6
Q ss_pred cccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccC
Q 025245 87 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYG 166 (255)
Q Consensus 87 ~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g 166 (255)
..+++||||+++++|+.|+|+||||++.||+||+||++||+|+++++|+|+.||||+|+|||||||+..+++.++.++|+
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g 104 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYG 104 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCC
Confidence 45788999999999999999999999999999999999999888888999999999999999999988889999999999
Q ss_pred CCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC--CCeE
Q 025245 167 SSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK--VPCR 244 (255)
Q Consensus 167 ~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~--~~V~ 244 (255)
..|++|++.++|.++|+|+||+.++++++|||||++.++++||++|+|||+|++|||||++|++++++ +++|. ++|+
T Consensus 105 ~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v~ 183 (193)
T 3k2c_A 105 EKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRIE 183 (193)
T ss_dssp SCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCEE
T ss_pred CcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 67999 9999
Q ss_pred EEeeEEecC
Q 025245 245 IINSGELPL 253 (255)
Q Consensus 245 I~~cGvL~~ 253 (255)
|.+||+|..
T Consensus 184 I~~cG~l~~ 192 (193)
T 3k2c_A 184 IRDCGVLGS 192 (193)
T ss_dssp EEEEEECC-
T ss_pred EEEceEeCC
Confidence 999999974
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-52 Score=352.42 Aligned_cols=163 Identities=57% Similarity=0.979 Sum_probs=125.7
Q ss_pred ccceEEEEEEEC--Ce---eceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCc
Q 025245 88 VTTKVFFDVDIG--GK---PAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 162 (255)
Q Consensus 88 ~~~~v~~di~i~--~t---~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~ 162 (255)
+| +|||||+++ ++ +.|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||+..++++|+.
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~ 80 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR 80 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc
Confidence 46 899999998 64 4599999999999999999999999988888899999999999999999997778899999
Q ss_pred cccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEc--CHHHHHHhhcCCCCCCC-CC
Q 025245 163 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVID--GMDVVRKLESVETSRTD-YP 239 (255)
Q Consensus 163 ~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~Vie--Gmdvl~~I~~~~~~~~~-~P 239 (255)
++||..|++|++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++ |||||++|++++++..+ +|
T Consensus 81 si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P 160 (172)
T 2c3b_A 81 SIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRS 160 (172)
T ss_dssp ------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCS
T ss_pred ccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999998766 99
Q ss_pred CCCeEEEeeEEe
Q 025245 240 KVPCRIINSGEL 251 (255)
Q Consensus 240 ~~~V~I~~cGvL 251 (255)
.++|+|.+||+|
T Consensus 161 ~~~v~I~~cG~l 172 (172)
T 2c3b_A 161 NTRPKIVNCGEL 172 (172)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999997
No 18
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=6.8e-51 Score=356.97 Aligned_cols=165 Identities=50% Similarity=0.936 Sum_probs=157.1
Q ss_pred cccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCc-----ccCCCEEEEeecCceeeeCCCcCCCCCCC
Q 025245 87 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-----GYKGCSFHRIIKDFMIQGGDFTEGDGTGG 161 (255)
Q Consensus 87 ~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~-----~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~ 161 (255)
..+++||||+++++++.|+|+||||.+.||+||+||++||+++++. +|+|+.||||+|+|||||||++.++|+|+
T Consensus 57 ~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg 136 (229)
T 1z81_A 57 PSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGS 136 (229)
T ss_dssp TTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCC
T ss_pred CCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCC
Confidence 3478999999999999999999999999999999999999876542 39999999999999999999988899999
Q ss_pred ccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEE--cCHHHHHHhhcCCCCCC-CC
Q 025245 162 ISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVI--DGMDVVRKLESVETSRT-DY 238 (255)
Q Consensus 162 ~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~Vi--eGmdvl~~I~~~~~~~~-~~ 238 (255)
.++||..|++|++.++|.++|+|||||.+|++++|||||++.++++||++|+|||+|+ +|||||++|++++++.+ ++
T Consensus 137 ~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~ 216 (229)
T 1z81_A 137 LSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYK 216 (229)
T ss_dssp CBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCC
T ss_pred CccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999999987 99
Q ss_pred CCCCeEEEeeEEe
Q 025245 239 PKVPCRIINSGEL 251 (255)
Q Consensus 239 P~~~V~I~~cGvL 251 (255)
|.++|+|.+||+|
T Consensus 217 P~~~V~I~~cG~l 229 (229)
T 1z81_A 217 PKIPINVVECGEL 229 (229)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999997
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=7.3e-50 Score=352.00 Aligned_cols=165 Identities=27% Similarity=0.478 Sum_probs=150.4
Q ss_pred cccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccC-----------C----C--cccCCCEEEEeecCceee
Q 025245 87 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGE-----------K----G--YGYKGCSFHRIIKDFMIQ 149 (255)
Q Consensus 87 ~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~-----------~----g--~~Y~g~~f~Rii~~f~iq 149 (255)
..++++||||.+++|+.|+|+||||.+.||+||+||++||+|+ + | ++|+|+.||||+++||||
T Consensus 12 ~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQ 91 (234)
T 2ose_A 12 GKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIV 91 (234)
T ss_dssp CSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEE
T ss_pred CCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEE
Confidence 4578999999999999999999999999999999999999976 3 4 669999999999999999
Q ss_pred eCCCcCCCCCCCccccCCC-----CCCCcccccccCCeEEEEee----cCCCCCCceeEEEcCC------CCCCCCCCeE
Q 025245 150 GGDFTEGDGTGGISIYGSS-----FEDESFVLKHVGPGVLSMAN----AGPNTNGSQFFICTVK------TPWLDNRHVV 214 (255)
Q Consensus 150 gGd~~~~~g~g~~~~~g~~-----~~~e~~~l~h~~~G~lsma~----~g~~s~gSqFfItl~~------~~~Ld~~~~V 214 (255)
|||+..++|+|+.++||.. |+ ++.++|.++|+||||| .+|+++||||||++.+ ++|||++|+|
T Consensus 92 gGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tV 169 (234)
T 2ose_A 92 SGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVV 169 (234)
T ss_dssp ECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEE
T ss_pred cCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeE
Confidence 9998778999999999987 66 4689998999999999 8999999999999999 9999999999
Q ss_pred EEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEeeEEecC
Q 025245 215 FGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 253 (255)
Q Consensus 215 FG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~cGvL~~ 253 (255)
||+|++|||||++|++++++.+++|.++|+|.+||+|..
T Consensus 170 FG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 170 IGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp EEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred EEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 999999999999999999999999999999999999864
No 20
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=4.3e-48 Score=329.94 Aligned_cols=155 Identities=44% Similarity=0.669 Sum_probs=145.8
Q ss_pred EEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCC
Q 025245 93 FFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDE 172 (255)
Q Consensus 93 ~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e 172 (255)
++++.++ |+.|+|+||||++.||+||+||++||+ +|| |+|+.||||+|+|||||||+. +++.|+.++||..|++|
T Consensus 16 ~~~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 90 (185)
T 2poe_A 16 FQGVRII-TNYGDLKFELFCSQCPKACKNFLALSA--SGY-YKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDE 90 (185)
T ss_dssp CCEEEEE-ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCC
T ss_pred ceEEEEE-ecCccEEEEEeCCCCcHHHHHHHHHhc--cCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence 3445554 799999999999999999999999996 788 999999999999999999987 78889999999999999
Q ss_pred c-ccccccCCeEEEEeecC----CCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 025245 173 S-FVLKHVGPGVLSMANAG----PNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 247 (255)
Q Consensus 173 ~-~~l~h~~~G~lsma~~g----~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~ 247 (255)
. ..++|.++|+||||+.+ |++++|||||+++++++||++|+|||+|++|||||++|++++++.+++|.++|+|.+
T Consensus 91 ~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 2poe_A 91 IYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKD 170 (185)
T ss_dssp CCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEE
T ss_pred ccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 8 78999999999999998 999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEec
Q 025245 248 SGELP 252 (255)
Q Consensus 248 cGvL~ 252 (255)
|+++.
T Consensus 171 ~~i~~ 175 (185)
T 2poe_A 171 IVIHS 175 (185)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 21
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.4e-47 Score=355.43 Aligned_cols=164 Identities=66% Similarity=1.084 Sum_probs=156.9
Q ss_pred cceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCc--------ccCCCEEEEeecCceeeeCCCcCCCCCC
Q 025245 89 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY--------GYKGCSFHRIIKDFMIQGGDFTEGDGTG 160 (255)
Q Consensus 89 ~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~--------~Y~g~~f~Rii~~f~iqgGd~~~~~g~g 160 (255)
+++||||+++++++.|+|+||||++.||+||+||++||++++|+ +|+|+.||||+|+|||||||++.++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999986543 3999999999999999999999889999
Q ss_pred CccccCCCCCCCcccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 025245 161 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 240 (255)
Q Consensus 161 ~~~~~g~~~~~e~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~ 240 (255)
+.++||..|++|++.++|+++|+|+||+.+|+++|||||||+.+++|||++|+|||+|++||+||++|+..+++. ++|.
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~ 173 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPA 173 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEES
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999877 9999
Q ss_pred CCeEEEeeEEecC
Q 025245 241 VPCRIINSGELPL 253 (255)
Q Consensus 241 ~~V~I~~cGvL~~ 253 (255)
++|+|.+||++..
T Consensus 174 ~~v~I~~~g~l~~ 186 (370)
T 1ihg_A 174 KLCVIAECGELKE 186 (370)
T ss_dssp SCEEEEEEEEECT
T ss_pred eeEEEEEEEEecc
Confidence 9999999999853
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=9e-48 Score=321.42 Aligned_cols=149 Identities=49% Similarity=0.761 Sum_probs=142.1
Q ss_pred eeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCCcc-ccccc
Q 025245 101 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKHV 179 (255)
Q Consensus 101 t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e~~-~l~h~ 179 (255)
|+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+||+||||+. +++.|+.++||..|++|.. .++|+
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~ 82 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCA--SNY-YNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEYSEYLKHN 82 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCSC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhh--hcc-cCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccccCcCcCcC
Confidence 799999999999999999999999997 678 999999999999999999987 7788899999999999985 78998
Q ss_pred CCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCC-CCCCCCeEEEeeEEecC
Q 025245 180 GPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRT-DYPKVPCRIINSGELPL 253 (255)
Q Consensus 180 ~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~-~~P~~~V~I~~cGvL~~ 253 (255)
++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+ ++|.++|+|.+|+++..
T Consensus 83 ~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~ 157 (161)
T 2ok3_A 83 VRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157 (161)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECC
T ss_pred CCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999987 99999999999999863
No 23
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1e-47 Score=320.75 Aligned_cols=149 Identities=50% Similarity=0.811 Sum_probs=141.5
Q ss_pred CeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCCcc-cccc
Q 025245 100 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKH 178 (255)
Q Consensus 100 ~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e~~-~l~h 178 (255)
.|+.|+|+||||++.||+||+||++||+ +|+ |+|+.||||+|+|||||||+. +++.|+.++||..|++|.. .++|
T Consensus 11 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h 86 (160)
T 2fu0_A 11 YTTMGDIHISLFYKECKKTVQNFSVHSI--NGY-YNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEFFDHLNH 86 (160)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCBTTBCS
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhc--cCc-cCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCccccccCCccc
Confidence 3689999999999999999999999996 788 999999999999999999986 7788999999999999987 6999
Q ss_pred cCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEeeEEec
Q 025245 179 VGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELP 252 (255)
Q Consensus 179 ~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~cGvL~ 252 (255)
.++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.++|+|.+|.++.
T Consensus 87 ~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 87 SKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp SSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred CCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 98999999999999999999999999999999999999999999999999999999999999999999998863
No 24
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.7e-47 Score=321.27 Aligned_cols=154 Identities=50% Similarity=0.868 Sum_probs=145.3
Q ss_pred cceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCC
Q 025245 89 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS 168 (255)
Q Consensus 89 ~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~ 168 (255)
+..+.|+ |+.|+|+||||++.||+||+||++||+ +|| |+|+.||||+|+|||||||+. +++.++.++|+..
T Consensus 11 ~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~ 81 (166)
T 2x7k_A 11 PPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR--RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQ 81 (166)
T ss_dssp CSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH--HTT-TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSSC
T ss_pred CCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHHh--cCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCc
Confidence 3567776 489999999999999999999999996 788 999999999999999999987 7888999999999
Q ss_pred CCCCc-ccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 025245 169 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 247 (255)
Q Consensus 169 ~~~e~-~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~ 247 (255)
|++|. ..++|.++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.++|+|.+
T Consensus 82 ~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~ 161 (166)
T 2x7k_A 82 FEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (166)
T ss_dssp BCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEE
T ss_pred cccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 99998 58999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEe
Q 025245 248 SGEL 251 (255)
Q Consensus 248 cGvL 251 (255)
|.++
T Consensus 162 ~~i~ 165 (166)
T 2x7k_A 162 AYPS 165 (166)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
No 25
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1e-46 Score=324.03 Aligned_cols=149 Identities=48% Similarity=0.794 Sum_probs=142.4
Q ss_pred eeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCCc-cccccc
Q 025245 101 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDES-FVLKHV 179 (255)
Q Consensus 101 t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e~-~~l~h~ 179 (255)
|+.|+|+||||++.||+||+||++||+ +|| |+|+.||||+++|||||||+. +++.|+.++||..|++|. ..++|+
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~--~g~-Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~~~~l~h~ 101 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCK--KHY-YDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEFRPNLSHT 101 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHH--TTT-TTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCCCTTCCSC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHh--cCC-CCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccccCcCcCCC
Confidence 589999999999999999999999996 788 999999999999999999987 788899999999999994 789999
Q ss_pred CCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCC-CCCCCCeEEEeeEEecC
Q 025245 180 GPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRT-DYPKVPCRIINSGELPL 253 (255)
Q Consensus 180 ~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~-~~P~~~V~I~~cGvL~~ 253 (255)
.+|+|||||.+|++++|||||++.++++||++|+|||+|++|||||++|++++++.+ ++|.++|+|.+|+++.+
T Consensus 102 ~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~d 176 (197)
T 1zkc_A 102 GRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVD 176 (197)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEEC
T ss_pred CceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcC
Confidence 999999999999999999999999999999999999999999999999999999987 99999999999999864
No 26
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.3e-47 Score=324.79 Aligned_cols=156 Identities=42% Similarity=0.697 Sum_probs=144.9
Q ss_pred cceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCC
Q 025245 89 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS 168 (255)
Q Consensus 89 ~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~ 168 (255)
+..+.|+ |+.|+|+||||++.||+||+||++||+ +|+ |+|+.||||+|+|||||||+. +++.|+.++||..
T Consensus 38 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~--~g~-Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~~ 108 (196)
T 2b71_A 38 RGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLCE--MGF-YDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGEY 108 (196)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHH--TTT-TTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBSC
T ss_pred CcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHhh--cCC-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCc
Confidence 4667776 489999999999999999999999996 788 999999999999999999987 7888999999999
Q ss_pred CCCCc-ccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 025245 169 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 247 (255)
Q Consensus 169 ~~~e~-~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~ 247 (255)
|++|. ..++|.++|+||||+.+|++++|||||++++++|||++|+|||+|++|||||++|++++++.+++|.++|+|.+
T Consensus 109 ~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 188 (196)
T 2b71_A 109 FEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILR 188 (196)
T ss_dssp BCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEE
T ss_pred ccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEE
Confidence 99995 57899899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecC
Q 025245 248 SGELPL 253 (255)
Q Consensus 248 cGvL~~ 253 (255)
|+++..
T Consensus 189 ~~i~~d 194 (196)
T 2b71_A 189 TSTAVN 194 (196)
T ss_dssp EEC---
T ss_pred EEEecC
Confidence 999853
No 27
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=7.4e-47 Score=320.00 Aligned_cols=147 Identities=54% Similarity=0.849 Sum_probs=140.1
Q ss_pred CeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCCcc-cccc
Q 025245 100 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKH 178 (255)
Q Consensus 100 ~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e~~-~l~h 178 (255)
.|+.|+|+||||++.||+||+||++||+ .+| |+|+.||||+|+|||||||+. +++.|+.++||..|++|.. .++|
T Consensus 27 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h 102 (176)
T 2a2n_A 27 HTSMGDIHTKLFPVECPKTVENFCVHSR--NGY-YNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHSTLRH 102 (176)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhh--cCc-cCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcccccccccccc
Confidence 4689999999999999999999999996 788 999999999999999999986 6788999999999999987 6999
Q ss_pred cCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCC-CCCCCCCCeEEEeeEE
Q 025245 179 VGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETS-RTDYPKVPCRIINSGE 250 (255)
Q Consensus 179 ~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~-~~~~P~~~V~I~~cGv 250 (255)
.++|+|+||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|.+
T Consensus 103 ~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 103 DRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp CSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred CCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998 7899999999999875
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=324.49 Aligned_cols=156 Identities=49% Similarity=0.844 Sum_probs=146.7
Q ss_pred cceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCC
Q 025245 89 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS 168 (255)
Q Consensus 89 ~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~ 168 (255)
+..+.|+ |+.|+|+||||++.||+||+||++||+ ++| |+|+.||||+|+|||||||+. +++.++.++|+..
T Consensus 11 ~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~--~g~-Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~~ 81 (203)
T 2k7n_A 11 PPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR--RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQ 81 (203)
T ss_dssp CSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHHH--HTC-GGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCSC
T ss_pred CCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHHh--cCc-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCc
Confidence 4567776 488999999999999999999999996 788 999999999999999999987 6788899999999
Q ss_pred CCCCc-ccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 025245 169 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 247 (255)
Q Consensus 169 ~~~e~-~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~ 247 (255)
|++|. ..++|.++|+|+|||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.++|+|.+
T Consensus 82 f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~ 161 (203)
T 2k7n_A 82 FEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIK 161 (203)
T ss_dssp BCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEE
T ss_pred ccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEE
Confidence 99998 58999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecC
Q 025245 248 SGELPL 253 (255)
Q Consensus 248 cGvL~~ 253 (255)
|++++.
T Consensus 162 ~~v~~~ 167 (203)
T 2k7n_A 162 AYPSGG 167 (203)
T ss_dssp EEECCC
T ss_pred EEEEec
Confidence 999864
No 29
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3e-46 Score=319.89 Aligned_cols=146 Identities=48% Similarity=0.755 Sum_probs=136.4
Q ss_pred eeceeEEEEecCCCChhHHHHHHHHhccCC-------------CcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCC
Q 025245 101 KPAGRIVMGLFGDVVPKTAENFRALCTGEK-------------GYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 167 (255)
Q Consensus 101 t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~-------------g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~ 167 (255)
|+.|+|+||||++.||+||+||++||+|++ ++ |+|+.||||+|+|||||||+. ++++|+ +|.
T Consensus 30 t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgGd~~-g~G~gg---~g~ 104 (191)
T 1w74_A 30 TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGGDPT-GTGRGG---PGY 104 (191)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEECCTT-SSSSCC---SSC
T ss_pred ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCCEEecCCCC-CCCCCC---CCC
Confidence 589999999999999999999999998754 45 999999999999999999975 667776 578
Q ss_pred CCCCC-cccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEc--CHHHHHHhhcCCCCCCCCCCCCeE
Q 025245 168 SFEDE-SFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVID--GMDVVRKLESVETSRTDYPKVPCR 244 (255)
Q Consensus 168 ~~~~e-~~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~Vie--Gmdvl~~I~~~~~~~~~~P~~~V~ 244 (255)
.|++| ++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++ |||||++|++++++.+++|.++|+
T Consensus 105 ~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~ 184 (191)
T 1w74_A 105 KFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVV 184 (191)
T ss_dssp CBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCE
T ss_pred ccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeE
Confidence 89999 468999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred EEeeEEe
Q 025245 245 IINSGEL 251 (255)
Q Consensus 245 I~~cGvL 251 (255)
|.+|+++
T Consensus 185 I~~~~i~ 191 (191)
T 1w74_A 185 IESITIS 191 (191)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999985
No 30
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=3e-46 Score=322.38 Aligned_cols=149 Identities=38% Similarity=0.618 Sum_probs=136.3
Q ss_pred eeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeC-----CCcCCCCCCCcccc-------CCC
Q 025245 101 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGG-----DFTEGDGTGGISIY-------GSS 168 (255)
Q Consensus 101 t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgG-----d~~~~~g~g~~~~~-------g~~ 168 (255)
|+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+++|||||| |++ ++|.|+.++| +..
T Consensus 13 T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~~g~~ 88 (201)
T 3bo7_A 13 TTQGSLNIELHADMAPRACDSFLRLCA--VKY-FDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSISGFPGGAP 88 (201)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSSTTCCC
T ss_pred eCCCCEEEEEcCCCCcHHHHHHHHHHh--cCc-cCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCccccccccccCCCc
Confidence 589999999999999999999999996 788 999999999999999999 987 7788999999 889
Q ss_pred CCCCc-ccccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 025245 169 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 247 (255)
Q Consensus 169 ~~~e~-~~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdvl~~I~~~~~~~~~~P~~~V~I~~ 247 (255)
|++|. ..++|+.+|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+|.+
T Consensus 89 f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 168 (201)
T 3bo7_A 89 FEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEE 168 (201)
T ss_dssp BCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEE
T ss_pred ccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 99994 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecC
Q 025245 248 SGELPL 253 (255)
Q Consensus 248 cGvL~~ 253 (255)
|++|.+
T Consensus 169 ~~v~~d 174 (201)
T 3bo7_A 169 IIVFKN 174 (201)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999964
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=314.16 Aligned_cols=160 Identities=38% Similarity=0.672 Sum_probs=147.3
Q ss_pred ccccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCcc
Q 025245 84 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGIS 163 (255)
Q Consensus 84 ~~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~ 163 (255)
.++..+.+|+|+. +.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|||||||+. +++.|+.+
T Consensus 19 ~~~~~~~~V~l~T-----~~G~I~ieL~~~~aP~tv~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~s 89 (185)
T 2hq6_A 19 SEPPTNGKVLLKT-----TAGDIDIELWSKEAPKACRNFIQLCL--EAY-YDNTIFHRVVPGFIVQGGDPT-GTGSGGES 89 (185)
T ss_dssp CCCCCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHHH--TTT-TTTEECCEEETTTEEEECCTT-SSSSCCCC
T ss_pred cCCCCCCEEEEEe-----CCccEEEEEeCCCCcHHHHHHHHHhh--cCc-cCCCEEEEEECCCEEEcCCCC-CCCCCCCc
Confidence 3455667888885 78999999999999999999999996 788 999999999999999999986 78889999
Q ss_pred ccCCCCCCCcc-cccccCCeEEEEeecCCCCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHH--HHHhhcCCCCCCCCCC
Q 025245 164 IYGSSFEDESF-VLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDV--VRKLESVETSRTDYPK 240 (255)
Q Consensus 164 ~~g~~~~~e~~-~l~h~~~G~lsma~~g~~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdv--l~~I~~~~~~~~~~P~ 240 (255)
+||..|++|.. .++|+++|+|||||.++++++|||||+++++++||++|+|||+|+ ||++ +++|++++++++++|.
T Consensus 90 i~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~ 168 (185)
T 2hq6_A 90 IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPH 168 (185)
T ss_dssp TTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBS
T ss_pred ccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCC
Confidence 99999999985 688989999999999999999999999999999999999999999 8877 4789999999999999
Q ss_pred CCeEEEeeEEecC
Q 025245 241 VPCRIINSGELPL 253 (255)
Q Consensus 241 ~~V~I~~cGvL~~ 253 (255)
++|+|.+|++|..
T Consensus 169 ~~v~I~~~~v~~~ 181 (185)
T 2hq6_A 169 NPHKIKSCEVLFN 181 (185)
T ss_dssp SCCEEEEEEEEEC
T ss_pred CCeEEEEEEEeCC
Confidence 9999999999864
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=9.4e-45 Score=304.50 Aligned_cols=154 Identities=32% Similarity=0.529 Sum_probs=136.6
Q ss_pred ccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCC
Q 025245 88 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 167 (255)
Q Consensus 88 ~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~ 167 (255)
.+++++|+ |+.|+|+||||++.||+||+||++||+ +|| |+|+.||||+|+|||||||++...+ ...++.
T Consensus 3 ~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~ 71 (166)
T 1v9t_A 3 GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYVN--SGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNP 71 (166)
T ss_dssp CSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCC
T ss_pred CCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHhc--cCC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCC
Confidence 35677877 589999999999999999999999996 788 9999999999999999999875432 233577
Q ss_pred CCCCCcccccccCCeEEEEeec-CCCCCCceeEEEcCCCCCCCCC-----CeEEEEEEcCHHHHHHhhcCCCCC----CC
Q 025245 168 SFEDESFVLKHVGPGVLSMANA-GPNTNGSQFFICTVKTPWLDNR-----HVVFGHVIDGMDVVRKLESVETSR----TD 237 (255)
Q Consensus 168 ~~~~e~~~l~h~~~G~lsma~~-g~~s~gSqFfItl~~~~~Ld~~-----~~VFG~VieGmdvl~~I~~~~~~~----~~ 237 (255)
+|++|.....|+.+|+|||||. +|++++|||||++.+++|||++ |+|||+|++|||||++|++++++. ++
T Consensus 72 ~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~ 151 (166)
T 1v9t_A 72 PIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQN 151 (166)
T ss_dssp CBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEE
T ss_pred cccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCC
Confidence 8999986544557999999996 6999999999999999999998 999999999999999999999976 57
Q ss_pred CCCCCeEEEeeEEec
Q 025245 238 YPKVPCRIINSGELP 252 (255)
Q Consensus 238 ~P~~~V~I~~cGvL~ 252 (255)
+|.++|+|.+|++++
T Consensus 152 ~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 152 VPSKPVVILSATVLP 166 (166)
T ss_dssp EESSCCBEEEEEECC
T ss_pred CcCCCeEEEEEEEeC
Confidence 999999999999874
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.8e-45 Score=305.22 Aligned_cols=146 Identities=37% Similarity=0.602 Sum_probs=133.1
Q ss_pred CeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCCccc-ccc
Q 025245 100 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESFV-LKH 178 (255)
Q Consensus 100 ~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e~~~-l~h 178 (255)
.|+.|+|+||||++.||+||+||++||+ +|+ |+|+.||||+|+|||||||++.+. +.++++..|++|... ++|
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~~ 78 (164)
T 1lop_A 5 HTNHGDIVIKTFDDKAPETVKNFLDYCR--EGF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNGLKN 78 (164)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHH--TTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSSCCC
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHHh--cCC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccccccccc
Confidence 4689999999999999999999999996 788 999999999999999999987543 356678899999864 667
Q ss_pred cCCeEEEEeec-CCCCCCceeEEEcCCCCCCCCC--------CeEEEEEEcCHHHHHHhhcCCCCC----CCCCCCCeEE
Q 025245 179 VGPGVLSMANA-GPNTNGSQFFICTVKTPWLDNR--------HVVFGHVIDGMDVVRKLESVETSR----TDYPKVPCRI 245 (255)
Q Consensus 179 ~~~G~lsma~~-g~~s~gSqFfItl~~~~~Ld~~--------~~VFG~VieGmdvl~~I~~~~~~~----~~~P~~~V~I 245 (255)
.+|+|||||. +|++++|||||++.+++|||++ |+|||+|++|||||++|++++++. +++|.++|+|
T Consensus 79 -~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I 157 (164)
T 1lop_A 79 -TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVII 157 (164)
T ss_dssp -CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEE
T ss_pred -CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEE
Confidence 6999999974 7999999999999999999998 999999999999999999999975 5899999999
Q ss_pred EeeEEec
Q 025245 246 INSGELP 252 (255)
Q Consensus 246 ~~cGvL~ 252 (255)
.+|++++
T Consensus 158 ~~~~v~~ 164 (164)
T 1lop_A 158 ESVTVSE 164 (164)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999974
No 34
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-44 Score=316.49 Aligned_cols=161 Identities=35% Similarity=0.595 Sum_probs=145.7
Q ss_pred hccccccceEEEEEEECCeeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCc
Q 025245 83 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 162 (255)
Q Consensus 83 ~~~~~~~~~v~~di~i~~t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~ 162 (255)
...+..+.+|+|+. +.|+|+||||++.||+||+||++||+ .|| |+|+.||||+++|||||||+. ++++|+.
T Consensus 15 ~~~p~~~~~V~l~T-----~~G~I~ieL~~d~aP~tv~NF~~L~~--~g~-Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg~ 85 (232)
T 3bkp_A 15 YFQGSTRGKVVLHT-----SLGDLDVELWARECPLACRNFVQLCL--EGY-YVNTIFHRVVKDFIVQGGDPT-GTGRGGA 85 (232)
T ss_dssp GCCCSCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHHH--HTT-TTTCBEEEEETTTEEEECCTT-SSSSCCC
T ss_pred cccCCCCCEEEEEE-----CCCcEEEEEcCCCCcHHHHHHHHHhh--cCc-cCCCEEEEEeCCCEEEcCCCC-CCCCCCC
Confidence 33455677888874 78999999999999999999999997 678 999999999999999999997 7889999
Q ss_pred ccc--CCCCCCCcc-cccccCCeEEEEeecCC--------------CCCCceeEEEcCCCCCCCCCCeEEEEEEcCHHH-
Q 025245 163 SIY--GSSFEDESF-VLKHVGPGVLSMANAGP--------------NTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDV- 224 (255)
Q Consensus 163 ~~~--g~~~~~e~~-~l~h~~~G~lsma~~g~--------------~s~gSqFfItl~~~~~Ld~~~~VFG~VieGmdv- 224 (255)
++| |..|++|.. .++|+.+|+||||+.++ ++++|||||++.+++|||++|+|||+|+ ||+|
T Consensus 86 si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~ 164 (232)
T 3bkp_A 86 DTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLY 164 (232)
T ss_dssp CCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHH
T ss_pred ccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchH
Confidence 999 899999985 78899999999999987 6999999999999999999999999999 7765
Q ss_pred -HHHhhcCCCCCCCCCCCCeEEEeeEEecC
Q 025245 225 -VRKLESVETSRTDYPKVPCRIINSGELPL 253 (255)
Q Consensus 225 -l~~I~~~~~~~~~~P~~~V~I~~cGvL~~ 253 (255)
|++|++++++.+++|.++|+|.+|++|..
T Consensus 165 ~v~kI~~~~t~~~~~P~~~i~I~~~~vl~d 194 (232)
T 3bkp_A 165 NLMKFNDLEVGKEDRPMTPPFIKSVDVLWN 194 (232)
T ss_dssp HHHHHTTSCBCGGGCBSSCCBEEEEEEEEC
T ss_pred HHHHHHcCCcCCCCCcCCCeEEEEEEEEcC
Confidence 89999999999999999999999999853
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=6.1e-44 Score=299.77 Aligned_cols=144 Identities=34% Similarity=0.528 Sum_probs=130.3
Q ss_pred eeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCCCcc-ccccc
Q 025245 101 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKHV 179 (255)
Q Consensus 101 t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~e~~-~l~h~ 179 (255)
|+.|+|+||||++.||+||+||++||+ ++| |+|+.||||+++|||||||++...+ ...++..+++|.. .++|
T Consensus 10 T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~~~E~~~~l~~- 82 (167)
T 3s6m_A 10 TNHGVIKLELDEAKAPKTVENFLNYVK--KGH-YDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPIANEANNGLKN- 82 (167)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH--HTT-TTTEECCEEETTTEEEESSEETTTE---ECCCCCCBCCCGGGCCCC-
T ss_pred eCCceEEEEEeCCCCcHHHHHHHHHhh--hcc-cCCCEeEEecCCcEEEeccccCCCC---CCCCCCccCCcccccccC-
Confidence 699999999999999999999999996 678 9999999999999999999875432 2345777888864 4555
Q ss_pred CCeEEEEee-cCCCCCCceeEEEcCCCCCCCCC--------CeEEEEEEcCHHHHHHhhcCCCCC----CCCCCCCeEEE
Q 025245 180 GPGVLSMAN-AGPNTNGSQFFICTVKTPWLDNR--------HVVFGHVIDGMDVVRKLESVETSR----TDYPKVPCRII 246 (255)
Q Consensus 180 ~~G~lsma~-~g~~s~gSqFfItl~~~~~Ld~~--------~~VFG~VieGmdvl~~I~~~~~~~----~~~P~~~V~I~ 246 (255)
.+|+||||| .+|++++|||||++.+++|||++ |+|||+|++|||||++|+++++++ +++|.++|+|.
T Consensus 83 ~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~ 162 (167)
T 3s6m_A 83 DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVIE 162 (167)
T ss_dssp CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEEE
T ss_pred CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEEE
Confidence 799999999 67999999999999999999998 999999999999999999999987 68999999999
Q ss_pred eeEEe
Q 025245 247 NSGEL 251 (255)
Q Consensus 247 ~cGvL 251 (255)
+|.+|
T Consensus 163 ~~~il 167 (167)
T 3s6m_A 163 KAVVV 167 (167)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99886
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-37 Score=285.85 Aligned_cols=141 Identities=28% Similarity=0.414 Sum_probs=119.4
Q ss_pred ccccceEEEEEEE--CC---eeceeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCC
Q 025245 86 AKVTTKVFFDVDI--GG---KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTG 160 (255)
Q Consensus 86 ~~~~~~v~~di~i--~~---t~~G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g 160 (255)
+..+.+.++++.+ .+ ++.|+|+||||++.||+||+||++||+ +|| |+|+.|||| ++|||||||++ +++.|
T Consensus 165 P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~--~Gf-YdGt~FHRV-~gFmIQgGDp~-g~G~G 239 (369)
T 3rfy_A 165 PLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE--RHF-YDGMEIQRS-DGFVVQTGDPE-GPAEG 239 (369)
T ss_dssp CEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH--TTT-TTTEECEEE-EEEEECCCCCC-CCCSC
T ss_pred ccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh--cCC-cCCCeeeee-CCeeEecCCCC-CCCCC
Confidence 3444455544444 32 369999999999999999999999996 888 999999999 99999999997 45544
Q ss_pred ---------------------CccccCCCCCCCcc-----cccccCCeEEEEeec--CCCCCCceeEEEc-------CCC
Q 025245 161 ---------------------GISIYGSSFEDESF-----VLKHVGPGVLSMANA--GPNTNGSQFFICT-------VKT 205 (255)
Q Consensus 161 ---------------------~~~~~g~~~~~e~~-----~l~h~~~G~lsma~~--g~~s~gSqFfItl-------~~~ 205 (255)
+.++|+..|++|++ .++|+.+|+|||||. +||+++|||||++ .+.
T Consensus 240 ~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~ 319 (369)
T 3rfy_A 240 FIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNS 319 (369)
T ss_dssp CCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCC
T ss_pred ccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCC
Confidence 35677777887754 678889999999997 8999999999999 468
Q ss_pred CCCCCCCeEEEEEEcCHHHHHHhhcC
Q 025245 206 PWLDNRHVVFGHVIDGMDVVRKLESV 231 (255)
Q Consensus 206 ~~Ld~~~~VFG~VieGmdvl~~I~~~ 231 (255)
+|||++|+|||+|++|||||++|++.
T Consensus 320 ~~LDgkytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 320 NILDGRYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp SSSCSCEEEEEEEEESTTGGGGCCTT
T ss_pred cccCCCeeEEEEEecCHHHHHHHhCC
Confidence 99999999999999999999999873
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=91.73 E-value=0.99 Score=37.59 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.3
Q ss_pred EEEEEECCeece-eEEEEecCCCChhHHHHHHHHh
Q 025245 93 FFDVDIGGKPAG-RIVMGLFGDVVPKTAENFRALC 126 (255)
Q Consensus 93 ~~di~i~~t~~G-~ivIeL~~~~aP~t~~nF~~L~ 126 (255)
|+.|++. ..| .++.+|..+.||+||+.|+++-
T Consensus 23 ~i~itl~--~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITLE--KRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEET--TTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEe--cCCeEEEEEEccccChHHHHHHHHhC
Confidence 5566663 344 4889999999999999999975
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=90.86 E-value=0.38 Score=38.95 Aligned_cols=98 Identities=19% Similarity=0.214 Sum_probs=57.0
Q ss_pred eeEEEEecCCCChhHHHHHHHHhccCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCCC-CcccccccCCe
Q 025245 104 GRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFED-ESFVLKHVGPG 182 (255)
Q Consensus 104 G~ivIeL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~~-e~~~l~h~~~G 182 (255)
..++++|+.+.||+||+.|+++- - +... +.+. .+ -+-+ +.. ..+.. |+. .....+|
T Consensus 39 ~~~~a~L~D~~aP~Ta~~f~~~L---P---l~~~-~~~~-g~-E~y~-~lp------------~~l~~~en~-~~~~~~G 95 (153)
T 2nnz_A 39 AECEVELYEEWAPETVRAIADAL---P---IKST-ANRW-GD-EIYF-TTQ------------VAVEKEENS-KDVVELG 95 (153)
T ss_dssp EEEEECCCTTSCHHHHHHHHHTC---S---EEEE-EEEE-TT-EEEE-CCS------------CCCCCSSCC-BCCCCTT
T ss_pred EEEEEEEcCCCCHHHHHHHHHhC---C---cEEE-HHhh-CC-cEEE-ECC------------CCCCCCCCC-cccCCCC
Confidence 67999999999999999999986 1 2222 2221 11 1111 110 00111 221 2334578
Q ss_pred EEEEeecCCCCCCceeEEEcCCCCCCCC------CCeEEEEEEcCHHHHHHhh
Q 025245 183 VLSMANAGPNTNGSQFFICTVKTPWLDN------RHVVFGHVIDGMDVVRKLE 229 (255)
Q Consensus 183 ~lsma~~g~~s~gSqFfItl~~~~~Ld~------~~~VFG~VieGmdvl~~I~ 229 (255)
-|++-..+. .+.|-.++.|...+ .-.+||+|.+|++.|.++.
T Consensus 96 DI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 96 DVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp EEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred eEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 888865432 37777777653322 2488999999987776553
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=58.05 E-value=34 Score=26.83 Aligned_cols=94 Identities=16% Similarity=0.188 Sum_probs=52.9
Q ss_pred eeEEEEecCCCChhHHHHHHHHhc--cCCCcccCCCEEEEeecCceeeeCCCcCCCCCCCccccCCCCC-CCcccccccC
Q 025245 104 GRIVMGLFGDVVPKTAENFRALCT--GEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFE-DESFVLKHVG 180 (255)
Q Consensus 104 G~ivIeL~~~~aP~t~~nF~~L~~--g~~g~~Y~g~~f~Rii~~f~iqgGd~~~~~g~g~~~~~g~~~~-~e~~~l~h~~ 180 (255)
..++.+|+.. |.|++.|.++-= +.-.. |. ..++=..|.. .+ +|+.. .-..
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~-~g-~E~y~~~p~~----------------------l~~~e~~~-~~~~ 74 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIPFESVVNT-WG-EEIYFSTPVN----------------------VQKMENPR-EVVE 74 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCSEEEECEE-SS-SEEEEECSCC----------------------CCCCSSEE-SSBC
T ss_pred cEEEEEEcCC--HHHHHHHHHHCCcEEEHHH-hC-CcEEEECCcc----------------------CCCCCCCC-ccCC
Confidence 4688999755 779999998851 11111 32 2222222221 11 11111 1225
Q ss_pred CeEEEEeecCCCCCCceeEEEcCCCCCCCC------CCeEEEEEEcCHHHHHHhh
Q 025245 181 PGVLSMANAGPNTNGSQFFICTVKTPWLDN------RHVVFGHVIDGMDVVRKLE 229 (255)
Q Consensus 181 ~G~lsma~~g~~s~gSqFfItl~~~~~Ld~------~~~VFG~VieGmdvl~~I~ 229 (255)
.|-|+.-..+. -|-|-.++.|...+ .-.+||+|.+|++.+..+.
T Consensus 75 ~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 75 IGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp TTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred CCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 78888765433 37777777754433 3589999999977665553
Done!