Your job contains 1 sequence.
>025246
MASVCASPAVAAISSPSSQKSRSVAGATKASFLGGKKLKLRKNGATAGTRSVSVSAAAAD
PNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLEIVHCRWAMLGAAGIFIPELLTKLGILNT
PSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVG
YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHL
ADPGHATVFAAFTPK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025246
(255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2082767 - symbol:LHCA2 "photosystem I light ha... 1018 9.8e-103 1
TAIR|locus:2202150 - symbol:Lhca6 "photosystem I light ha... 708 7.0e-70 1
TAIR|locus:2146544 - symbol:AT5G28450 species:3702 "Arabi... 530 5.1e-51 1
TAIR|locus:2079117 - symbol:LHCA4 "light-harvesting chlor... 491 6.9e-47 1
TAIR|locus:2200868 - symbol:LHCA3 "photosystem I light ha... 324 3.2e-41 2
TAIR|locus:2825741 - symbol:Lhca5 "photosystem I light ha... 420 2.3e-39 1
TAIR|locus:2149765 - symbol:LHCB4.1 "light harvesting com... 216 2.0e-30 2
TAIR|locus:2097608 - symbol:LHCB4.2 "light harvesting com... 207 1.1e-29 2
TAIR|locus:2082717 - symbol:LHCA1 "photosystem I light ha... 315 3.1e-28 1
TAIR|locus:2019287 - symbol:CAB3 "chlorophyll A/B binding... 302 7.3e-27 1
TAIR|locus:2019372 - symbol:CAB2 "chlorophyll A/B-binding... 302 7.3e-27 1
TAIR|locus:2019322 - symbol:CAB1 "chlorophyll A/B binding... 302 7.3e-27 1
TAIR|locus:2040934 - symbol:LHB1B2 "photosystem II light ... 301 9.4e-27 1
TAIR|locus:2040944 - symbol:LHB1B1 "light-harvesting chlo... 301 9.4e-27 1
UNIPROTKB|P12330 - symbol:CAB1R "Chlorophyll a-b binding ... 289 1.8e-25 1
UNIPROTKB|P12331 - symbol:CAB2R "Chlorophyll a-b binding ... 288 2.2e-25 1
TAIR|locus:2044988 - symbol:LHCB2.2 "photosystem II light... 288 2.2e-25 1
TAIR|locus:2042148 - symbol:LHCB2.1 "photosystem II light... 288 2.2e-25 1
TAIR|locus:2089139 - symbol:LHCB2.3 "photosystem II light... 288 2.2e-25 1
TAIR|locus:2122794 - symbol:LHCB5 "light harvesting compl... 284 5.9e-25 1
TAIR|locus:2047751 - symbol:LHCB4.3 "light harvesting com... 168 9.1e-25 2
TAIR|locus:2162540 - symbol:LHCB3 "light-harvesting chlor... 266 4.8e-23 1
UNIPROTKB|Q93WD2 - symbol:Lhcb4 "Chlorophyll a-b binding ... 159 1.0e-21 2
TAIR|locus:2036209 - symbol:LHCB6 "light harvesting compl... 251 1.9e-21 1
TAIR|locus:2011691 - symbol:AT1G76570 species:3702 "Arabi... 235 9.2e-20 1
>TAIR|locus:2082767 [details] [associations]
symbol:LHCA2 "photosystem I light harvesting complex gene
2" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0009768 "photosynthesis, light harvesting in
photosystem I" evidence=TAS] [GO:0009782 "photosystem I antenna
complex" evidence=TAS] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] InterPro:IPR001344
Pfam:PF00504 EMBL:CP002686 GO:GO:0009535 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
TCDB:5.B.4.1.1 UniGene:At.46743 UniGene:At.55066 KO:K08908
EMBL:AF134120 EMBL:AY054670 EMBL:AY065429 EMBL:AY072483
EMBL:BT002070 IPI:IPI00543126 PIR:T50550 RefSeq:NP_191706.2
ProteinModelPortal:Q9SYW8 SMR:Q9SYW8 STRING:Q9SYW8 PRIDE:Q9SYW8
EnsemblPlants:AT3G61470.1 GeneID:825320 KEGG:ath:AT3G61470
TAIR:At3g61470 InParanoid:Q9SYW8 OMA:SWYTAGE PhylomeDB:Q9SYW8
ProtClustDB:CLSN2696878 ArrayExpress:Q9SYW8 Genevestigator:Q9SYW8
Uniprot:Q9SYW8
Length = 257
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 53 SVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWA 99
SV A AADP+RP+WFPGSTPPEWLDGSLPGDFGFDPLGL EIVHCRWA
Sbjct: 42 SVRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWA 101
Query: 100 MLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIK 159
MLGAAGIFIPE LTK+GILNTPSWYTAGE EYFTD TTLF+VE+I IGWAEGRRWADIIK
Sbjct: 102 MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIK 161
Query: 160 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 219
PG VNTDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVM
Sbjct: 162 PGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVM 221
Query: 220 GAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 255
GAWFQHIYTGTGPIDNL AHLADPGHAT+FAAFTPK
Sbjct: 222 GAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 257
>TAIR|locus:2202150 [details] [associations]
symbol:Lhca6 "photosystem I light harvesting complex gene
6" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002684 GO:GO:0009507 GO:GO:0016020 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 KO:K08908 EMBL:AY086461 EMBL:BT020322
EMBL:BT020554 IPI:IPI00532569 RefSeq:NP_173349.1 UniGene:At.359
ProteinModelPortal:Q8LCQ4 SMR:Q8LCQ4 STRING:Q8LCQ4 PRIDE:Q8LCQ4
DNASU:838498 EnsemblPlants:AT1G19150.1 GeneID:838498
KEGG:ath:AT1G19150 TAIR:At1g19150 InParanoid:Q8LCQ4 OMA:WFAQAEL
PhylomeDB:Q8LCQ4 ProtClustDB:PLN00098 Genevestigator:Q8LCQ4
Uniprot:Q8LCQ4
Length = 270
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 134/220 (60%), Positives = 156/220 (70%)
Query: 47 AGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGL-------------EI 93
AG + VS P+RPLWFPGS+PPEWLDGSLPGDFGFDPLGL E+
Sbjct: 50 AG-KEVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAEL 108
Query: 94 VHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRR 153
+H RWAML GI IPE L +LG + SWY AG EYF D+TTLF+ +M+ +GWAEGRR
Sbjct: 109 IHSRWAMLAVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRR 168
Query: 154 WADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRL 213
WAD+IKPG V+ +P +P+ DVGYPGGLWFD + WG GSPE V LRTKEIKNGRL
Sbjct: 169 WADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRL 228
Query: 214 AMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 253
AMLA +G FQ YT PI+NL+AHLADPGH VF+AFT
Sbjct: 229 AMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFT 268
>TAIR|locus:2146544 [details] [associations]
symbol:AT5G28450 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
[GO:0016168 "chlorophyll binding" evidence=ISS] [GO:0030076
"light-harvesting complex" evidence=ISS] InterPro:IPR001344
Pfam:PF00504 EMBL:CP002688 GO:GO:0009507 GO:GO:0016020
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
IPI:IPI00523588 RefSeq:NP_198197.1 UniGene:At.46743
UniGene:At.55066 ProteinModelPortal:F4K8I1 SMR:F4K8I1 DNASU:832932
EnsemblPlants:AT5G28450.1 GeneID:832932 KEGG:ath:AT5G28450
KO:K08908 PhylomeDB:F4K8I1 Uniprot:F4K8I1
Length = 173
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 96/109 (88%), Positives = 101/109 (92%)
Query: 149 AEGR--RWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTK 206
+ GR R DIIKPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP K+KELRTK
Sbjct: 65 SNGRKGRAPDIIKPGSVNTDPVFPNNKLTGTDIGYPGGLWFDPLGWGSGSPTKIKELRTK 124
Query: 207 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 255
EIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAFTPK
Sbjct: 125 EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 173
>TAIR|locus:2079117 [details] [associations]
symbol:LHCA4 "light-harvesting chlorophyll-protein
complex I subunit A4" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016168 "chlorophyll binding"
evidence=ISS;NAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
transport" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009941 GO:GO:0080167 GO:GO:0018298 GO:GO:0009535
GO:GO:0010287 EMBL:AL132955 EMBL:M63931 EMBL:AY093080 EMBL:BT000093
EMBL:AY086470 IPI:IPI00523187 PIR:T45707 RefSeq:NP_190331.3
UniGene:At.21346 UniGene:At.27524 UniGene:At.35504 UniGene:At.35803
UniGene:At.66361 UniGene:At.68076 UniGene:At.71101
ProteinModelPortal:P27521 SMR:P27521 STRING:P27521 PaxDb:P27521
PRIDE:P27521 EnsemblPlants:AT3G47470.1 GeneID:823901
KEGG:ath:AT3G47470 TAIR:At3g47470 eggNOG:NOG249845
HOGENOM:HOG000238033 InParanoid:P27521 KO:K08910 OMA:WFVQAEL
PhylomeDB:P27521 ProtClustDB:PLN00101 Genevestigator:P27521
GermOnline:AT3G47470 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
Uniprot:P27521
Length = 251
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 100/215 (46%), Positives = 132/215 (61%)
Query: 51 SVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCR 97
S S+ + + W PG P++L GSL GD GFDPLGL E+V+ R
Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGR 101
Query: 98 WAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADI 157
WAMLG AG+ +PE+ TK+GI+N P WY AG+ +YF ++TLF++E I + E RRW DI
Sbjct: 102 WAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDI 161
Query: 158 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 217
PG VN DPIF L +VGYPGG+ F+PL + +P +E + KE+ NGRLAMLA
Sbjct: 162 KNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNF---AP--TQEAKEKELANGRLAMLA 215
Query: 218 VMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAF 252
+G QH TG GP +NL+ HL+DP H T+ F
Sbjct: 216 FLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
>TAIR|locus:2200868 [details] [associations]
symbol:LHCA3 "photosystem I light harvesting complex gene
3" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR001344 Pfam:PF00504 EMBL:CP002684
GO:GO:0009535 GO:GO:0010287 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 PDB:2O01 PDBsum:2O01 UniGene:At.2877 EMBL:AC005850
UniGene:At.21403 EMBL:AY059879 EMBL:AY093370 IPI:IPI00532189
PIR:E96640 RefSeq:NP_001185280.1 RefSeq:NP_176347.1
UniGene:At.20472 UniGene:At.71924 UniGene:At.71944
ProteinModelPortal:Q9SY97 SMR:Q9SY97 STRING:Q9SY97 PRIDE:Q9SY97
ProMEX:Q9SY97 EnsemblPlants:AT1G61520.1 EnsemblPlants:AT1G61520.3
GeneID:842446 KEGG:ath:AT1G61520 TAIR:At1g61520 InParanoid:Q9SY97
KO:K08909 OMA:LMGFAEH PhylomeDB:Q9SY97 ProtClustDB:PLN00048
ArrayExpress:Q9SY97 Genevestigator:Q9SY97 Uniprot:Q9SY97
Length = 273
Score = 324 (119.1 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 78/185 (42%), Positives = 109/185 (58%)
Query: 82 GDFGF-DPLGL---EIVHCRWAMLGAAGIFIPELLTKLGILNTPS---WYT------AGE 128
G GF +P L EI++ R+AMLGAAG PE+L K G++ + W+ AG
Sbjct: 86 GTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGT 145
Query: 129 LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNK-LTGT-DVGYPGGLW 186
Y+ D TLF++EM +G+AE RR D PG + K L G+ + YPGG +
Sbjct: 146 YTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPF 205
Query: 187 FDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHA 246
F+PLG+G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP NL+ HLADP +
Sbjct: 206 FNPLGFGKDE-KSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNN 264
Query: 247 TVFAA 251
V +
Sbjct: 265 NVLTS 269
Score = 130 (50.8 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 28/46 (60%), Positives = 30/46 (65%)
Query: 51 SVSVSAAAADP-----NRPLWFPGSTPPEWLDGSLPGDFGFDPLGL 91
S V AAA P NRPLWF S +LDGSLPGD+GFDPLGL
Sbjct: 36 SFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGL 81
>TAIR|locus:2825741 [details] [associations]
symbol:Lhca5 "photosystem I light harvesting complex gene
5" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009782 "photosystem I
antenna complex" evidence=IDA] [GO:0031409 "pigment binding"
evidence=IDA] [GO:0009768 "photosynthesis, light harvesting in
photosystem I" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 EMBL:CP002684 EMBL:AC083835
GO:GO:0009535 GO:GO:0031409 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 GO:GO:0009768
UniGene:At.52042 EMBL:AY062097 EMBL:AY090263 EMBL:AK221694
IPI:IPI00542586 PIR:F96510 RefSeq:NP_175137.1 RefSeq:NP_849778.1
UniGene:At.20798 ProteinModelPortal:Q9C639 SMR:Q9C639 STRING:Q9C639
PRIDE:Q9C639 EnsemblPlants:AT1G45474.1 EnsemblPlants:AT1G45474.2
GeneID:841099 KEGG:ath:AT1G45474 TAIR:At1g45474 InParanoid:Q9C639
KO:K08911 OMA:VQASVTH PhylomeDB:Q9C639 ProtClustDB:PLN00147
Genevestigator:Q9C639 GO:GO:0009782 Uniprot:Q9C639
Length = 256
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 91/209 (43%), Positives = 122/209 (58%)
Query: 63 RPLWFPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIP 109
R W PG PP +LDG+L GD+GFDPLGL E+VH R+AMLG AGI
Sbjct: 46 RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFT 105
Query: 110 ELLTKLGILNTPSWYTAGELEY-FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPI 168
+LL GI N P WY AG +++ F T TL +V+ + +G+AE +R+ D + PG +
Sbjct: 106 DLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGS 165
Query: 169 F---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH 225
F L G + GYPGG +PLG + + + KEIKNGRLAM+A++G + Q
Sbjct: 166 FFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQA 224
Query: 226 IYTGTGPIDNLIAHLADPGHATVFAA-FT 253
T TGPIDNL+ HL++P H T+ FT
Sbjct: 225 SVTHTGPIDNLVEHLSNPWHKTIIQTLFT 253
>TAIR|locus:2149765 [details] [associations]
symbol:LHCB4.1 "light harvesting complex photosystem II"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0009637 GO:GO:0010218 GO:GO:0010114 GO:GO:0018298
GO:GO:0009535 GO:GO:0010287 HOGENOM:HOG000238033 GO:GO:0009522
GO:GO:0009523 GO:GO:0016168 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 eggNOG:NOG319330 KO:K08915 EMBL:X71878
EMBL:AL161946 EMBL:AF370474 EMBL:AY048262 EMBL:AY048300
EMBL:AY057641 EMBL:AY059861 EMBL:AY081680 EMBL:AY092980
EMBL:AY133566 EMBL:BT000363 IPI:IPI00542715 PIR:S33443
RefSeq:NP_195773.1 UniGene:At.23015 UniGene:At.23659
UniGene:At.23691 UniGene:At.24017 UniGene:At.75201
ProteinModelPortal:Q07473 SMR:Q07473 IntAct:Q07473 STRING:Q07473
PaxDb:Q07473 PRIDE:Q07473 EnsemblPlants:AT5G01530.1 GeneID:830325
KEGG:ath:AT5G01530 TAIR:At5g01530 InParanoid:Q07473 OMA:PLHTTIF
PhylomeDB:Q07473 ProtClustDB:PLN00187 Genevestigator:Q07473
GermOnline:AT5G01530 Uniprot:Q07473
Length = 290
Score = 216 (81.1 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 57/162 (35%), Positives = 83/162 (51%)
Query: 92 EIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG 151
E++H RWAML G E LT G+ +W AG++E D ++ + F
Sbjct: 140 ELIHGRWAMLATLGALSVEWLT--GV----TWQDAGKVE-LVDGSSYLGQPLPFS--IST 190
Query: 152 RRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNG 211
W +++ G + N +L YPGG +FDPLG + PEK +L+ EIK+
Sbjct: 191 LIWIEVLVIGYIEFQR---NAELDSEKRLYPGGKFFDPLGLAA-DPEKTAQLQLAEIKHA 246
Query: 212 RLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 253
RLAM+A +G Q TG GP++N HL+DP H T+ F+
Sbjct: 247 RLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 288
Score = 135 (52.6 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 62 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGL 91
+RPLW+PG+ P+WLDGSL GD+GFDP GL
Sbjct: 54 DRPLWYPGAISPDWLDGSLVGDYGFDPFGL 83
Score = 49 (22.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 200 VKELRTKEIKNGRLAMLAVMGAWFQHIYTG 229
++ R E+ +GR AMLA +GA TG
Sbjct: 133 IQRFRECELIHGRWAMLATLGALSVEWLTG 162
>TAIR|locus:2097608 [details] [associations]
symbol:LHCB4.2 "light harvesting complex photosystem II"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009637 "response to blue light" evidence=IEP;RCA] [GO:0010114
"response to red light" evidence=IEP;RCA] [GO:0010218 "response to
far red light" evidence=IEP;RCA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0009941 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0018298 EMBL:AC010871
GO:GO:0009535 HOGENOM:HOG000238033 GO:GO:0009522 GO:GO:0009523
GO:GO:0016168 GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 KO:K08915
ProtClustDB:PLN00187 EMBL:AF134127 EMBL:AY065140 EMBL:AY081608
IPI:IPI00521901 IPI:IPI00542269 PIR:T52317 RefSeq:NP_187506.1
RefSeq:NP_850545.1 UniGene:At.21828 UniGene:At.22485
UniGene:At.6984 ProteinModelPortal:Q9XF88 SMR:Q9XF88 STRING:Q9XF88
PaxDb:Q9XF88 PRIDE:Q9XF88 ProMEX:Q9XF88 EnsemblPlants:AT3G08940.2
GeneID:820043 KEGG:ath:AT3G08940 TAIR:At3g08940 eggNOG:NOG330021
InParanoid:Q9XF88 OMA:TRFTAWF PhylomeDB:Q9XF88
Genevestigator:Q9XF88 GermOnline:AT3G08940 Uniprot:Q9XF88
Length = 287
Score = 207 (77.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 56/162 (34%), Positives = 81/162 (50%)
Query: 92 EIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG 151
E++H RWAML G E LT G+ +W AG++E D ++ + F
Sbjct: 137 ELIHGRWAMLATLGAITVEWLT--GV----TWQDAGKVE-LVDGSSYLGQPLPFS--IST 187
Query: 152 RRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNG 211
W +++ G + N +L YPGG +FDPLG S P K +L+ EIK+
Sbjct: 188 LIWIEVLVIGYIEFQR---NAELDSEKRLYPGGKFFDPLGLAS-DPVKKAQLQLAEIKHA 243
Query: 212 RLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 253
RLAM+ +G Q TG GP++N HL+DP H T+ F+
Sbjct: 244 RLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 285
Score = 137 (53.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 48 GTRSVSVSAA-AADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGL 91
GT+ S A +RPLWFPG+ PE+LDGSL GD+GFDP GL
Sbjct: 36 GTKKASPKKAKTVISDRPLWFPGAKSPEYLDGSLVGDYGFDPFGL 80
Score = 46 (21.3 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 200 VKELRTKEIKNGRLAMLAVMGA 221
++ R E+ +GR AMLA +GA
Sbjct: 130 LQRFRECELIHGRWAMLATLGA 151
>TAIR|locus:2082717 [details] [associations]
symbol:LHCA1 "photosystem I light harvesting complex gene
1" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009768 "photosynthesis, light harvesting in photosystem I"
evidence=IMP] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655
GO:GO:0046872 GO:GO:0009941 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 GO:GO:0010287
HOGENOM:HOG000238033 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 EMBL:M85150 EMBL:X56062
EMBL:AF324692 EMBL:AF325016 EMBL:AF326866 EMBL:AF339688
EMBL:AF361847 EMBL:AY070473 EMBL:AY094437 EMBL:BT000852
EMBL:AK317555 IPI:IPI00516813 PIR:S25435 RefSeq:NP_191049.1
UniGene:At.23982 UniGene:At.67867 PDB:2O01 PDB:2WSC PDB:2WSE
PDB:2WSF PDBsum:2O01 PDBsum:2WSC PDBsum:2WSE PDBsum:2WSF
ProteinModelPortal:Q01667 SMR:Q01667 DIP:DIP-59003N STRING:Q01667
PaxDb:Q01667 PRIDE:Q01667 ProMEX:Q01667 EnsemblPlants:AT3G54890.1
GeneID:824654 KEGG:ath:AT3G54890 TAIR:At3g54890 eggNOG:NOG263751
InParanoid:Q01667 KO:K08907 OMA:LAIEFLA PhylomeDB:Q01667
ProtClustDB:PLN00099 EvolutionaryTrace:Q01667 Genevestigator:Q01667
GO:GO:0009768 Uniprot:Q01667
Length = 241
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 81/199 (40%), Positives = 101/199 (50%)
Query: 66 WFPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELL 112
W PG P +LDGS PGDFGFDPLGL E++HCRWAML GI +PE L
Sbjct: 48 WMPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL 107
Query: 113 TKLGILNTPSWYT--AGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 170
+ W G+ Y + + I E A + + DP
Sbjct: 108 GYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILA--IEFLAIAFVEHQRSMEKDP--E 163
Query: 171 NNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTG 229
K YPGG FDPLG+ S P+K++EL+ KEIKNGRLA+LA +G Q Y G
Sbjct: 164 KKK-------YPGGA-FDPLGY-SKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPG 214
Query: 230 TGPIDNLIAHLADPGHATV 248
TGP++NL HLADP H +
Sbjct: 215 TGPLENLATHLADPWHNNI 233
>TAIR|locus:2019287 [details] [associations]
symbol:CAB3 "chlorophyll A/B binding protein 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016168 "chlorophyll
binding" evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002684 GO:GO:0005739 GO:GO:0046872
GO:GO:0018298 GO:GO:0009535 UniGene:At.49175 GO:GO:0010287
EMBL:AC008030 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
IPI:IPI00527705 RefSeq:NP_564339.1 RefSeq:NP_564340.1
UniGene:At.10812 UniGene:At.24351 UniGene:At.27031 UniGene:At.32199
UniGene:At.43708 UniGene:At.66422 UniGene:At.70617 UniGene:At.71449
UniGene:At.71528 UniGene:At.71547 DNASU:839869 DNASU:839870
EnsemblPlants:AT1G29910.1 EnsemblPlants:AT1G29920.1 GeneID:839869
GeneID:839870 KEGG:ath:AT1G29910 KEGG:ath:AT1G29920 KO:K08912
EMBL:X03908 EMBL:AY065165 EMBL:AY114594 ProteinModelPortal:Q8VZ87
SMR:Q8VZ87 IntAct:Q8VZ87 STRING:Q8VZ87 PaxDb:Q8VZ87 PRIDE:Q8VZ87
TAIR:At1g29910 eggNOG:NOG327854 PhylomeDB:Q8VZ87
Genevestigator:Q8VZ87 GermOnline:AT1G29910 Uniprot:Q8VZ87
Length = 267
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 83/209 (39%), Positives = 109/209 (52%)
Query: 67 FPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLT 113
F G +P +L G PGD+G+D GL E++H RWAMLGA G PELL
Sbjct: 62 FSGESP-SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 114 KLGI-LNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG--RRWA-DIIKPGCVNTDPIF 169
+ G+ W+ AG + F+D ++ + A+ WA +I G V +
Sbjct: 121 RNGVKFGEAVWFKAGS-QIFSDGGLDYLGNPSLVH-AQSILAIWATQVILMGAVEGYRVA 178
Query: 170 PNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYT 228
N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 179 GNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 236
Query: 229 GTGPIDNLIAHLADP--GHATVFAA-FTP 254
G GPI+NL HLADP +A FA F P
Sbjct: 237 GKGPIENLADHLADPVNNNAWAFATNFVP 265
>TAIR|locus:2019372 [details] [associations]
symbol:CAB2 "chlorophyll A/B-binding protein 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016168 "chlorophyll
binding" evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0010218 "response to far red light" evidence=IEP] [GO:0009750
"response to fructose stimulus" evidence=IEP] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0048046 GO:GO:0009750 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 UniGene:At.49175
EMBL:AC008030 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 EMBL:X03907
EMBL:AY052237 EMBL:AY054198 EMBL:AY060500 EMBL:AY062814
EMBL:AY081572 EMBL:AY128345 EMBL:BT000726 EMBL:AY086905
IPI:IPI00527705 PIR:A29280 RefSeq:NP_564339.1 RefSeq:NP_564340.1
UniGene:At.10812 UniGene:At.24351 UniGene:At.27031 UniGene:At.32199
UniGene:At.43708 UniGene:At.66422 UniGene:At.70617 UniGene:At.71449
UniGene:At.71528 UniGene:At.71547 ProteinModelPortal:P0CJ48
SMR:P0CJ48 IntAct:P0CJ48 PRIDE:P0CJ48 DNASU:839869 DNASU:839870
EnsemblPlants:AT1G29910.1 EnsemblPlants:AT1G29920.1 GeneID:839869
GeneID:839870 KEGG:ath:AT1G29910 KEGG:ath:AT1G29920 TAIR:At1g29920
HOGENOM:HOG000238032 KO:K08912 PhylomeDB:P0CJ48 Uniprot:P0CJ48
Length = 267
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 83/209 (39%), Positives = 109/209 (52%)
Query: 67 FPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLT 113
F G +P +L G PGD+G+D GL E++H RWAMLGA G PELL
Sbjct: 62 FSGESP-SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 114 KLGI-LNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG--RRWA-DIIKPGCVNTDPIF 169
+ G+ W+ AG + F+D ++ + A+ WA +I G V +
Sbjct: 121 RNGVKFGEAVWFKAGS-QIFSDGGLDYLGNPSLVH-AQSILAIWATQVILMGAVEGYRVA 178
Query: 170 PNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYT 228
N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 179 GNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 236
Query: 229 GTGPIDNLIAHLADP--GHATVFAA-FTP 254
G GPI+NL HLADP +A FA F P
Sbjct: 237 GKGPIENLADHLADPVNNNAWAFATNFVP 265
>TAIR|locus:2019322 [details] [associations]
symbol:CAB1 "chlorophyll A/B binding protein 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016168
"chlorophyll binding" evidence=ISS;TAS] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0015979
"photosynthesis" evidence=ISS] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
UniGene:At.23809 GO:GO:0018298 GO:GO:0009535 UniGene:At.49175
EMBL:AC008030 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
UniGene:At.10812 UniGene:At.24351 UniGene:At.32199 UniGene:At.43708
UniGene:At.66422 UniGene:At.71449 UniGene:At.71528
HOGENOM:HOG000238032 KO:K08912 eggNOG:NOG327854
GermOnline:AT1G29910 EMBL:X03909 EMBL:AF428359 EMBL:AY045673
EMBL:AY050935 EMBL:AY058180 EMBL:AY091169 EMBL:X15221 EMBL:X15222
EMBL:Z17799 IPI:IPI00547631 PIR:A86423 RefSeq:NP_174286.1
UniGene:At.19140 UniGene:At.48174 UniGene:At.71551
ProteinModelPortal:P04778 SMR:P04778 IntAct:P04778 STRING:P04778
PaxDb:P04778 PRIDE:P04778 ProMEX:P04778 EnsemblPlants:AT1G29930.1
GeneID:839871 KEGG:ath:AT1G29930 TAIR:At1g29930 InParanoid:P04778
OMA:SSGIEFY PhylomeDB:P04778 ProtClustDB:PLN00025
Genevestigator:P04778 Uniprot:P04778
Length = 267
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 83/209 (39%), Positives = 109/209 (52%)
Query: 67 FPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLT 113
F G +P +L G PGD+G+D GL E++H RWAMLGA G PELL
Sbjct: 62 FSGESP-SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 114 KLGI-LNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG--RRWA-DIIKPGCVNTDPIF 169
+ G+ W+ AG + F+D ++ + A+ WA +I G V +
Sbjct: 121 RNGVKFGEAVWFKAGS-QIFSDGGLDYLGNPSLVH-AQSILAIWATQVILMGAVEGYRVA 178
Query: 170 PNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYT 228
N L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 179 GNGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 236
Query: 229 GTGPIDNLIAHLADP--GHATVFAA-FTP 254
G GPI+NL HLADP +A FA F P
Sbjct: 237 GKGPIENLADHLADPVNNNAWAFATNFVP 265
>TAIR|locus:2040934 [details] [associations]
symbol:LHB1B2 "photosystem II light harvesting complex
gene B1B2" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0009769 "photosynthesis, light
harvesting in photosystem II" evidence=TAS] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016168 "chlorophyll binding"
evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0042651 "thylakoid membrane" evidence=TAS]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0015979 "photosynthesis" evidence=ISS] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 UniGene:At.10812 UniGene:At.24351 UniGene:At.32199
UniGene:At.66422 UniGene:At.71449 UniGene:At.71528
HOGENOM:HOG000238032 KO:K08912 ProtClustDB:PLN00025
UniGene:At.23647 UniGene:At.27457 UniGene:At.24064 UniGene:At.24888
EMBL:AF372886 EMBL:AY039561 EMBL:AY045806 EMBL:AF428397
EMBL:AF419548 EMBL:AF419587 EMBL:AY065125 EMBL:AY079101
EMBL:AY079110 EMBL:AY081587 EMBL:AY142513 EMBL:AK229627 EMBL:X64460
IPI:IPI00530785 PIR:S23546 RefSeq:NP_565786.1 UniGene:At.71003
UniGene:At.71384 ProteinModelPortal:Q39141 SMR:Q39141 IntAct:Q39141
STRING:Q39141 PRIDE:Q39141 EnsemblPlants:AT2G34420.1 GeneID:818005
KEGG:ath:AT2G34420 TAIR:At2g34420 InParanoid:Q39141
PhylomeDB:Q39141 ArrayExpress:Q39141 Genevestigator:Q39141
Uniprot:Q39141
Length = 265
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 82/209 (39%), Positives = 109/209 (52%)
Query: 67 FPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLT 113
F G PP +L G PGD+G+D GL E++H RWAMLGA G PELL
Sbjct: 60 FSGE-PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 118
Query: 114 KLGI-LNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG--RRWA-DIIKPGCVNTDPIF 169
+ G+ W+ AG + F+D ++ + A+ WA +I G V +
Sbjct: 119 RNGVKFGEAVWFKAGS-QIFSDGGLDYLGNPSLVH-AQSILAIWATQVILMGAVEGYRVA 176
Query: 170 PNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYT 228
+ L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 177 GDGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 234
Query: 229 GTGPIDNLIAHLADP--GHATVFAA-FTP 254
G GP++NL HLADP +A FA F P
Sbjct: 235 GKGPLENLADHLADPVNNNAWAFATNFVP 263
>TAIR|locus:2040944 [details] [associations]
symbol:LHB1B1 "light-harvesting chlorophyll-protein
complex II subunit B1" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0009769
"photosynthesis, light harvesting in photosystem II" evidence=TAS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS;TAS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0042651 "thylakoid membrane" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0010287 "plastoglobule"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR001344 Pfam:PF00504 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 GO:GO:0009765 Gene3D:1.10.3460.10
InterPro:IPR022796 InterPro:IPR023329 PANTHER:PTHR21649
SUPFAM:SSF103511 UniGene:At.10812 UniGene:At.24351 UniGene:At.66422
UniGene:At.71449 UniGene:At.71528 HOGENOM:HOG000238032 KO:K08912
ProtClustDB:PLN00025 UniGene:At.22980 UniGene:At.71384
EMBL:AF326864 EMBL:AF339687 EMBL:AY120776 EMBL:BT002103 EMBL:X64459
IPI:IPI00535697 PIR:S25677 RefSeq:NP_565787.1 UniGene:At.67299
UniGene:At.71696 ProteinModelPortal:Q39142 SMR:Q39142 STRING:Q39142
PRIDE:Q39142 EnsemblPlants:AT2G34430.1 GeneID:818006
KEGG:ath:AT2G34430 TAIR:At2g34430 InParanoid:Q39142 OMA:RITMRKA
PhylomeDB:Q39142 ArrayExpress:Q39142 Genevestigator:Q39142
Uniprot:Q39142
Length = 266
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 82/209 (39%), Positives = 109/209 (52%)
Query: 67 FPGSTPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLT 113
F G PP +L G PGD+G+D GL E++H RWAMLGA G PELL
Sbjct: 61 FSGE-PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 114 KLGI-LNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG--RRWA-DIIKPGCVNTDPIF 169
+ G+ W+ AG + F+D ++ + A+ WA +I G V +
Sbjct: 120 RNGVKFGEAVWFKAGS-QIFSDGGLDYLGNPSLVH-AQSILAIWATQVILMGAVEGYRVA 177
Query: 170 PNNKL-TGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYT 228
+ L D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I T
Sbjct: 178 GDGPLGEAEDLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 235
Query: 229 GTGPIDNLIAHLADP--GHATVFAA-FTP 254
G GP++NL HLADP +A FA F P
Sbjct: 236 GKGPLENLADHLADPVNNNAWAFATNFVP 264
>UNIPROTKB|P12330 [details] [associations]
symbol:CAB1R "Chlorophyll a-b binding protein 1,
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0009535 "chloroplast thylakoid membrane" evidence=ISS]
[GO:0015979 "photosynthesis" evidence=ISS] InterPro:IPR001344
Pfam:PF00504 GO:GO:0016021 GO:GO:0005739 GO:GO:0046872
GO:GO:0048046 GO:GO:0009941 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
HOGENOM:HOG000238032 KO:K08912 ProtClustDB:PLN00025 EMBL:X13908
EMBL:D00641 EMBL:AP005313 EMBL:AP005700 EMBL:AK060851 PIR:A44956
PIR:S03705 RefSeq:NP_001062939.1 UniGene:Os.7941
ProteinModelPortal:P12330 SMR:P12330 STRING:P12330
EnsemblPlants:LOC_Os09g17740.1 GeneID:4346803
KEGG:dosa:Os09t0346500-04 KEGG:osa:4346803 Gramene:P12330
eggNOG:NOG322441 OMA:GEARITM Uniprot:P12330
Length = 265
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 79/207 (38%), Positives = 103/207 (49%)
Query: 72 PPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLTKLGI- 117
PP +L G PGD+G+D GL E++H RWAMLGA G PELL + G+
Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 124
Query: 118 LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 170
W+ AG L+Y + + + ++ I WA ++ G V I
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAI-WA-----VQVVLMGAVEGYRIAG 178
Query: 171 NNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGT 230
D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG
Sbjct: 179 GPLGEVVDPLYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 231 GPIDNLIAHLADP--GHATVFAA-FTP 254
GP++NL HLADP +A +A F P
Sbjct: 237 GPLENLADHLADPVNNNAWAYATNFVP 263
>UNIPROTKB|P12331 [details] [associations]
symbol:CAB2R "Chlorophyll a-b binding protein 2,
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0009535 "chloroplast thylakoid membrane" evidence=ISS]
[GO:0015979 "photosynthesis" evidence=ISS] InterPro:IPR001344
Pfam:PF00504 GO:GO:0016021 GO:GO:0005739 GO:GO:0046872
GO:GO:0048046 GO:GO:0009941 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 GO:GO:0009522 GO:GO:0009523 GO:GO:0016168
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511 KO:K08912
OMA:SSGIEFY ProtClustDB:PLN00025 eggNOG:NOG322441 EMBL:X13909
EMBL:AP003278 EMBL:AK121563 PIR:S03706 RefSeq:NP_001043493.1
UniGene:Os.79136 ProteinModelPortal:P12331 SMR:P12331 STRING:P12331
EnsemblPlants:LOC_Os01g41710.1 GeneID:4324599
KEGG:dosa:Os01t0600900-02 KEGG:dosa:Os03t0165375-00
KEGG:dosa:Os06t0484450-00 KEGG:osa:4324599 Gramene:P12331
Uniprot:P12331
Length = 261
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 79/207 (38%), Positives = 103/207 (49%)
Query: 72 PPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLTKLGI- 117
PP +L G PGD+G+D GL E++H RWAMLGA G PELL + G+
Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 120
Query: 118 LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 170
W+ AG L+Y + + + ++ I WA ++ G V I
Sbjct: 121 FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAI-WA-----VQVVLMGAVEGYRIAG 174
Query: 171 NNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGT 230
D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG
Sbjct: 175 GPLGEVVDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 232
Query: 231 GPIDNLIAHLADP--GHATVFAA-FTP 254
GP++NL HLADP +A +A F P
Sbjct: 233 GPLENLADHLADPVNNNAWAYATNFVP 259
>TAIR|locus:2044988 [details] [associations]
symbol:LHCB2.2 "photosystem II light harvesting complex
gene 2.2" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0030076 "light-harvesting
complex" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001344
Pfam:PF00504 GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009941 GO:GO:0009535 GO:GO:0010287 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 HOGENOM:HOG000238032
ProtClustDB:PLN00025 EMBL:AC007211 EMBL:AF134123 EMBL:AY054218
EMBL:AY062563 EMBL:AY066036 EMBL:AY093372 IPI:IPI00542481
PIR:T52324 RefSeq:NP_178582.1 UniGene:At.48420 UniGene:At.63397
UniGene:At.72525 ProteinModelPortal:Q9S7J7 SMR:Q9S7J7 IntAct:Q9S7J7
STRING:Q9S7J7 PaxDb:Q9S7J7 PRIDE:Q9S7J7 ProMEX:Q9S7J7
EnsemblPlants:AT2G05070.1 GeneID:815055 KEGG:ath:AT2G05070
TAIR:At2g05070 eggNOG:NOG312402 InParanoid:Q9S7J7 KO:K08913
OMA:AFATKYT PhylomeDB:Q9S7J7 ArrayExpress:Q9S7J7
Genevestigator:Q9S7J7 Uniprot:Q9S7J7
Length = 265
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 82/220 (37%), Positives = 109/220 (49%)
Query: 61 PNRPLWF-PGS-TPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAG 105
P+RP + P S P +L G PGD+G+D GL E++H RWAMLGA G
Sbjct: 52 PDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111
Query: 106 IFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADI 157
PE+L+K G+ W+ AG L+Y + + ++ I WA +
Sbjct: 112 CTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----VQV 165
Query: 158 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 217
+ G + I G D YPGG FDPL PE EL+ KE+KNGRLAM +
Sbjct: 166 VLMGFIEGYRIGGGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFS 223
Query: 218 VMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254
+ G + Q I TG GPI+NL HLADP +A +A F P
Sbjct: 224 MFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVP 263
>TAIR|locus:2042148 [details] [associations]
symbol:LHCB2.1 "photosystem II light harvesting complex
gene 2.1" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0030076 "light-harvesting
complex" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0010218 "response to far red light" evidence=IEP] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009941 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0009535 GO:GO:0010287
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
HOGENOM:HOG000238032 ProtClustDB:PLN00025 UniGene:At.48420
UniGene:At.63397 KO:K08913 EMBL:AC007443 EMBL:AY052275
EMBL:AY052348 EMBL:BT001933 IPI:IPI00535929 RefSeq:NP_178585.1
ProteinModelPortal:Q9SHR7 SMR:Q9SHR7 STRING:Q9SHR7 PRIDE:Q9SHR7
EnsemblPlants:AT2G05100.1 GeneID:815058 KEGG:ath:AT2G05100
TAIR:At2g05100 InParanoid:Q9SHR7 OMA:MAASAIQ PhylomeDB:Q9SHR7
ArrayExpress:Q9SHR7 Genevestigator:Q9SHR7 Uniprot:Q9SHR7
Length = 265
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 82/220 (37%), Positives = 109/220 (49%)
Query: 61 PNRPLWF-PGS-TPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAG 105
P+RP + P S P +L G PGD+G+D GL E++H RWAMLGA G
Sbjct: 52 PDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111
Query: 106 IFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADI 157
PE+L+K G+ W+ AG L+Y + + ++ I WA +
Sbjct: 112 CTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----VQV 165
Query: 158 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 217
+ G + I G D YPGG FDPL PE EL+ KE+KNGRLAM +
Sbjct: 166 VLMGFIEGYRIGGGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFS 223
Query: 218 VMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254
+ G + Q I TG GPI+NL HLADP +A +A F P
Sbjct: 224 MFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVP 263
>TAIR|locus:2089139 [details] [associations]
symbol:LHCB2.3 "photosystem II light harvesting complex
gene 2.3" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016168
"chlorophyll binding" evidence=ISS] [GO:0030076 "light-harvesting
complex" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009637
"response to blue light" evidence=IEP;RCA] [GO:0010114 "response to
red light" evidence=IEP;RCA] [GO:0010218 "response to far red
light" evidence=IEP;RCA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 EMBL:CP002686 GO:GO:0009941
GO:GO:0009637 GO:GO:0010218 GO:GO:0010114 GO:GO:0009535
EMBL:AB018114 GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
HOGENOM:HOG000238032 ProtClustDB:PLN00025 UniGene:At.63397
KO:K08913 EMBL:AF134125 EMBL:AF370557 EMBL:BT006298 IPI:IPI00549108
PIR:T52322 RefSeq:NP_189406.1 UniGene:At.71997 UniGene:At.8025
ProteinModelPortal:Q9XF87 SMR:Q9XF87 STRING:Q9XF87 PRIDE:Q9XF87
EnsemblPlants:AT3G27690.1 GeneID:822391 KEGG:ath:AT3G27690
TAIR:At3g27690 InParanoid:Q9XF87 OMA:QHSSFAG PhylomeDB:Q9XF87
Genevestigator:Q9XF87 Uniprot:Q9XF87
Length = 266
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 81/220 (36%), Positives = 109/220 (49%)
Query: 61 PNRPLWF-PGS-TPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAG 105
P+RP + P S P +L G PGD+G+D GL E++H RWAMLGA G
Sbjct: 53 PDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 112
Query: 106 IFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADI 157
PE+L+K G+ W+ AG L+Y + + ++ I WA +
Sbjct: 113 CTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 166
Query: 158 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 217
+ G + I G D YPGG FDPL PE EL+ KE+KNGRLAM +
Sbjct: 167 VLMGFIEGYRIGGGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFS 224
Query: 218 VMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254
+ G + Q I TG GPI+NL H+ADP +A +A F P
Sbjct: 225 MFGFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVP 264
>TAIR|locus:2122794 [details] [associations]
symbol:LHCB5 "light harvesting complex of photosystem II
5" species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009533 "chloroplast stromal thylakoid"
evidence=IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS;IMP]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009783 "photosystem II antenna complex"
evidence=IMP] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0010196
"nonphotochemical quenching" evidence=IMP] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009637 "response to blue light"
evidence=IEP;RCA] [GO:0010114 "response to red light"
evidence=IEP;RCA] [GO:0010218 "response to far red light"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0009517 "PSII associated
light-harvesting complex II" evidence=IDA] InterPro:IPR001344
Pfam:PF00504 GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009637 GO:GO:0010218 GO:GO:0010114
GO:GO:0018298 GO:GO:0010287 GO:GO:0015979 EMBL:AL049488
EMBL:AL161517 GO:GO:0009522 GO:GO:0016168 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 HOGENOM:HOG000238032
EMBL:AF134129 EMBL:AF326900 EMBL:AF339718 EMBL:AF424597
EMBL:AF380631 EMBL:AY054126 EMBL:AY087939 IPI:IPI00535216
PIR:T04049 RefSeq:NP_192772.1 UniGene:At.23060
ProteinModelPortal:Q9XF89 SMR:Q9XF89 DIP:DIP-59004N STRING:Q9XF89
PaxDb:Q9XF89 PRIDE:Q9XF89 EnsemblPlants:AT4G10340.1 GeneID:826626
KEGG:ath:AT4G10340 TAIR:At4g10340 eggNOG:NOG321165
InParanoid:Q9XF89 KO:K08916 OMA:EGPVENL PhylomeDB:Q9XF89
ProtClustDB:CLSN2685679 Genevestigator:Q9XF89 GermOnline:AT4G10340
GO:GO:0009783 GO:GO:0009517 GO:GO:0010196 Uniprot:Q9XF89
Length = 280
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 81/204 (39%), Positives = 106/204 (51%)
Query: 61 PNRPLWFPG-----STPPEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLG 102
P+R ++ P S PE+L+G + GD+G+DP GL E++H RWAMLG
Sbjct: 65 PDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLG 124
Query: 103 AAGIFIPELLTKLGILNTPS--WYTAGELEYFTDTTTL-FIVEMIFIGWAEGRRWADIIK 159
AAG IPE L K G P W+ G L D TL + + I I A+++
Sbjct: 125 AAGFIIPEALNKYGANCGPEAVWFKTGAL--LLDGNTLNYFGKNIPINLVLAVV-AEVVL 181
Query: 160 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVM 219
G I N L D +PGG FDPLG PE+ L+ KEIKNGRLAM A++
Sbjct: 182 LGGAEYYRI--TNGLDFEDKLHPGGP-FDPLGLAK-DPEQGALLKVKEIKNGRLAMFAML 237
Query: 220 GAWFQHIYTGTGPIDNLIAHLADP 243
G + Q TG GP++NL HL+DP
Sbjct: 238 GFFIQAYVTGEGPVENLAKHLSDP 261
>TAIR|locus:2047751 [details] [associations]
symbol:LHCB4.3 "light harvesting complex photosystem II"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009765 "photosynthesis, light harvesting"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016168 "chlorophyll
binding" evidence=ISS] [GO:0030076 "light-harvesting complex"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009637
"response to blue light" evidence=IEP;RCA] [GO:0010114 "response to
red light" evidence=IEP;RCA] [GO:0010218 "response to far red
light" evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=RCA]
InterPro:IPR001344 Pfam:PF00504 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0018298 GO:GO:0009535 HOGENOM:HOG000238033
GO:GO:0009522 GO:GO:0009523 GO:GO:0016168 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 eggNOG:NOG319330 KO:K08915
OMA:TTLIWIE ProtClustDB:PLN00187 EMBL:AF134128 EMBL:AY070392
EMBL:AY096735 EMBL:AY088398 IPI:IPI00538445 PIR:T52316
RefSeq:NP_181539.1 UniGene:At.24469 ProteinModelPortal:Q9S7W1
SMR:Q9S7W1 PaxDb:Q9S7W1 PRIDE:Q9S7W1 EnsemblPlants:AT2G40100.1
GeneID:818599 KEGG:ath:AT2G40100 TAIR:At2g40100 InParanoid:Q9S7W1
PhylomeDB:Q9S7W1 Genevestigator:Q9S7W1 GermOnline:AT2G40100
Uniprot:Q9S7W1
Length = 276
Score = 168 (64.2 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 92 EIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG 151
E++H RWAMLG G E LT GI +W AG++E ++ ++ + +
Sbjct: 141 ELIHGRWAMLGTLGAIAVEALT--GI----AWQDAGKVELVEGSS--YLGQPLPFSLTT- 191
Query: 152 RRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNG 211
W +++ G + N++L YPGG +FDPLG + PEK+ L+ EIK+
Sbjct: 192 LIWIEVLVVGYIEFQR---NSELDPEKRIYPGG-YFDPLGLAA-DPEKLDTLKLAEIKHS 246
Query: 212 RLAMLAVMGAWFQHIYTGTGPIDNL 236
RLAM+A + Q +TG GP+ L
Sbjct: 247 RLAMVAFLIFALQAAFTGKGPVSFL 271
Score = 132 (51.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 60 DPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGL 91
D +R +WFPG+ PPEWLDGS+ GD GFDP GL
Sbjct: 53 DGDRLVWFPGANPPEWLDGSMIGDRGFDPFGL 84
Score = 46 (21.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 200 VKELRTKEIKNGRLAMLAVMGAWFQHIYTG 229
++ R E+ +GR AML +GA TG
Sbjct: 134 IQRFRECELIHGRWAMLGTLGAIAVEALTG 163
>TAIR|locus:2162540 [details] [associations]
symbol:LHCB3 "light-harvesting chlorophyll B-binding
protein 3" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=ISS;IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0005198 "structural
molecule activity" evidence=IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR001344 Pfam:PF00504 EMBL:CP002688 GO:GO:0005198
EMBL:AB010695 GO:GO:0009535 UniGene:At.49175 GO:GO:0015979
GO:GO:0009765 Gene3D:1.10.3460.10 InterPro:IPR022796
InterPro:IPR023329 PANTHER:PTHR21649 SUPFAM:SSF103511
UniGene:At.10812 UniGene:At.32199 UniGene:At.66422
HOGENOM:HOG000238032 ProtClustDB:PLN00025 UniGene:At.70236
UniGene:At.21173 EMBL:AF134126 EMBL:AF143691 EMBL:AF361858
EMBL:AF372917 EMBL:AY057735 IPI:IPI00532626 PIR:T52318
RefSeq:NP_200238.1 ProteinModelPortal:Q9S7M0 SMR:Q9S7M0
STRING:Q9S7M0 PRIDE:Q9S7M0 EnsemblPlants:AT5G54270.1 GeneID:835515
KEGG:ath:AT5G54270 TAIR:At5g54270 InParanoid:Q9S7M0 KO:K08914
OMA:ADDPVTF PhylomeDB:Q9S7M0 Genevestigator:Q9S7M0 Uniprot:Q9S7M0
Length = 265
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 76/205 (37%), Positives = 103/205 (50%)
Query: 73 PEWLDGSLPGDFGFDPLGL-------------EIVHCRWAMLGAAGIFIPELLTK-LGI- 117
P +L G PGD+G+D GL E++H RWAMLGA G PE+L K + +
Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRVD 123
Query: 118 LNTPSWYTAGELEYFTDTTTLFI--VEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLT 175
P W+ AG + F++ ++ ++ +I G V F N L
Sbjct: 124 FKEPVWFKAGS-QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEG---FRINGLD 179
Query: 176 GTDVG---YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 232
G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP
Sbjct: 180 GVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 233 IDNLIAHLADP--GHATVFAA-FTP 254
++NL+ HL +P +A FA F P
Sbjct: 239 LENLLDHLDNPVANNAWAFATKFAP 263
>UNIPROTKB|Q93WD2 [details] [associations]
symbol:Lhcb4 "Chlorophyll a-b binding protein CP29"
species:3055 "Chlamydomonas reinhardtii" [GO:0009503 "thylakoid
light-harvesting complex" evidence=IDA] [GO:0009765
"photosynthesis, light harvesting" evidence=NAS] [GO:0016168
"chlorophyll binding" evidence=NAS] InterPro:IPR001344 Pfam:PF00504
GO:GO:0016021 GO:GO:0046872 GO:GO:0009941 GO:GO:0009637
GO:GO:0010218 GO:GO:0010114 GO:GO:0018298 GO:GO:0010287
GO:GO:0009522 GO:GO:0009523 GO:GO:0016168 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 EMBL:AB051207 EMBL:AB051211
EMBL:AY171230 RefSeq:XP_001697193.1 UniGene:Cre.4370
ProteinModelPortal:Q93WD2 DIP:DIP-48401N STRING:Q93WD2 PRIDE:Q93WD2
GeneID:5722671 KEGG:cre:CHLREDRAFT_184810 eggNOG:NOG319330
KO:K08915 OMA:TTLIWIE ProtClustDB:CLSN2922608
BioCyc:MetaCyc:CHLREDRAFT_184810-MONOMER GO:GO:0009503
Uniprot:Q93WD2
Length = 280
Score = 159 (61.0 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 50/151 (33%), Positives = 73/151 (48%)
Query: 92 EIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEG 151
E++H RWAML G + E T G+ SW AG++E D + + + F
Sbjct: 137 ELIHGRWAMLACLGALVAEATT--GV----SWVEAGKVEL--DGASYAGLSLPFS--ITQ 186
Query: 152 RRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNG 211
W ++I G + N++ YPGG+ FDPL S E+ L+T EIK+
Sbjct: 187 LIWIEVILVGGAE---FYRNSETNPEKRCYPGGV-FDPLKLASEDEERAFRLKTAEIKHA 242
Query: 212 RLAMLAVMGAWFQHIYTGTGPIDNLIAHLAD 242
RLAM++ G Q + TG G + +L A AD
Sbjct: 243 RLAMVSFFGYGVQALSTGEGALGSL-AKFAD 272
Score = 133 (51.9 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 27/46 (58%), Positives = 30/46 (65%)
Query: 46 TAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGL 91
+ GTRS V + LW P +T PEWLDGSLPGD GFDPLGL
Sbjct: 34 STGTRSGGVGYRKYQGDA-LWLPNTTRPEWLDGSLPGDRGFDPLGL 78
Score = 48 (22.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 204 RTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 234
R E+ +GR AMLA +GA TG ++
Sbjct: 134 RECELIHGRWAMLACLGALVAEATTGVSWVE 164
Score = 41 (19.5 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 92 EIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAG 127
EI H R AM+ G + L T G L + + + G
Sbjct: 238 EIKHARLAMVSFFGYGVQALSTGEGALGSLAKFADG 273
>TAIR|locus:2036209 [details] [associations]
symbol:LHCB6 "light harvesting complex photosystem II
subunit 6" species:3702 "Arabidopsis thaliana" [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009765 "photosynthesis, light
harvesting" evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016168 "chlorophyll binding" evidence=ISS] [GO:0015979
"photosynthesis" evidence=IMP;NAS] [GO:0009783 "photosystem II
antenna complex" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010196 "nonphotochemical quenching"
evidence=IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] InterPro:IPR001344 Pfam:PF00504 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 EMBL:AC034256 HOGENOM:HOG000238033 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 GO:GO:0009783 GO:GO:0010196
UniGene:At.25300 EMBL:AF332425 EMBL:AY065113 EMBL:AY081644
IPI:IPI00524194 PIR:F86292 RefSeq:NP_173034.1 UniGene:At.15569
UniGene:At.72611 UniGene:At.74824 UniGene:At.74983
ProteinModelPortal:Q9LMQ2 SMR:Q9LMQ2 STRING:Q9LMQ2 PaxDb:Q9LMQ2
PRIDE:Q9LMQ2 DNASU:838151 EnsemblPlants:AT1G15820.1 GeneID:838151
KEGG:ath:AT1G15820 TAIR:At1g15820 eggNOG:NOG277110
InParanoid:Q9LMQ2 KO:K08917 OMA:SWIPAFK PhylomeDB:Q9LMQ2
ProtClustDB:PLN00170 ArrayExpress:Q9LMQ2 Genevestigator:Q9LMQ2
Uniprot:Q9LMQ2
Length = 258
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 67/195 (34%), Positives = 100/195 (51%)
Query: 48 GTRSVSVSAAAADPNRPLWFP----GST--PPEWLDGSLPGDFGFDPLGL---------- 91
G +++ V+AAAA P + W P G PEWLDGSLPGDFGFDPLGL
Sbjct: 40 GRKTLIVAAAAAQPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWY 98
Query: 92 ---EIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAG-ELEYFTDTT--TLFIVEMIF 145
E++H RWAM GIF+ + + G+ +W+ AG + + + +L +++
Sbjct: 99 REAELIHGRWAMAAVLGIFVGQAWS--GV----AWFEAGAQPDAIAPFSFGSLLGTQLLL 152
Query: 146 IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT------DVGYPGGLWFDPLGWGSGSPEK 199
+GW E +RW D P + + P +K D GYPGG +FDPLG + +
Sbjct: 153 MGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANYTGDQGYPGGRFFDPLGLAGKNRDG 212
Query: 200 VKELRTKEIKNGRLA 214
V E ++++ +LA
Sbjct: 213 VYEPDFEKLERLKLA 227
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 57/180 (31%), Positives = 87/180 (48%)
Query: 64 PLWFPGSTPPEW-LDG-SLPGDFGFDPL--GLEIVHCRWAMLGAAGIFIPELLTKLGILN 119
P W GS P ++ D L D F E++H RWAM GIF+ + + G+
Sbjct: 70 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS--GVAW 127
Query: 120 TPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKL----- 174
+ + F+ +L +++ +GW E +RW D P + + P +K
Sbjct: 128 FEAGAQPDAIAPFS-FGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFA 186
Query: 175 --TGTDVGYPGGLWFDPLGW------GSGSP--EKVKELRTKEIKNGRLAMLAVMGAWFQ 224
TG D GYPGG +FDPLG G P EK++ L+ EIK+ RLAM+A++ +F+
Sbjct: 187 NYTG-DQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFYFE 245
>TAIR|locus:2011691 [details] [associations]
symbol:AT1G76570 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009765
"photosynthesis, light harvesting" evidence=IEA] [GO:0015979
"photosynthesis" evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
[GO:0016168 "chlorophyll binding" evidence=ISS] [GO:0030076
"light-harvesting complex" evidence=ISS] [GO:0009637 "response to
blue light" evidence=IEP] [GO:0010218 "response to far red light"
evidence=IEP] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR001344 Pfam:PF00504
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016020
GO:GO:0009637 GO:GO:0010218 EMBL:AC015450 GO:GO:0009765
Gene3D:1.10.3460.10 InterPro:IPR022796 InterPro:IPR023329
PANTHER:PTHR21649 SUPFAM:SSF103511 HOGENOM:HOG000238032
IPI:IPI00528080 PIR:G96793 RefSeq:NP_177783.1 UniGene:At.34640
ProteinModelPortal:Q9C9K1 SMR:Q9C9K1 PaxDb:Q9C9K1 PRIDE:Q9C9K1
EnsemblPlants:AT1G76570.1 GeneID:843990 KEGG:ath:AT1G76570
TAIR:At1g76570 eggNOG:NOG237807 InParanoid:Q9C9K1 KO:K14172
OMA:DYGFDIA PhylomeDB:Q9C9K1 ProtClustDB:PLN00171
Genevestigator:Q9C9K1 Uniprot:Q9C9K1
Length = 327
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 66/202 (32%), Positives = 96/202 (47%)
Query: 64 PLWFPGSTPPEW-LD-GSLPGD-FGFDP-LGLEIVHCRWAMLGAAGIFIPELLTKLGILN 119
P + G P ++ D L D FD EI+H RWAML A G IPE+ G +
Sbjct: 123 PPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDLTGTFH 182
Query: 120 --TPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADI------IKPGCVN---TDPI 168
P W+ G + +T + + + ++G I + P + +
Sbjct: 183 FAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYCGIEAL 242
Query: 169 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYT 228
P D+ YPGG FDPL S P ++L+ KEIKNGRLAM+A +G + Q +T
Sbjct: 243 EPLGIYLPGDINYPGGTLFDPLNL-SEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFT 301
Query: 229 GTGPIDNLIAHLADPGHATVFA 250
G GP+ NL+ H++DP H + A
Sbjct: 302 GKGPVQNLVDHVSDPLHNNLIA 323
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.456 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 255 226 0.00078 113 3 11 22 0.40 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 610 (65 KB)
Total size of DFA: 194 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.45u 0.10s 18.55t Elapsed: 00:00:01
Total cpu time: 18.45u 0.11s 18.56t Elapsed: 00:00:01
Start: Thu May 9 23:41:26 2013 End: Thu May 9 23:41:27 2013