Your job contains 1 sequence.
>025248
MFWKERERENKELNGGPPTGQVRVLVVGDSGVIFVHDLSQRRTKTSLQKWAVEIATSGTF
SAPLASGGPGGLPVPYVVIGNKADVAAKEGTRGSSGNLVDAARQWVEKQGLLPSSEELPL
TESFPGGGGLIAAAKEARYDKEAVMKFFRMLIRRRYFSDEMPAPNPWSISPTHKPIQRLD
ENSSDDDKFYSSGYSSDPYNMLPPLPAQRNLTPPPTLYPQQPVSVQENYNLPRFSLTGSQ
EISSSARSKRTDINV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025248
(255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006713 - symbol:LIP1 "Light Insensitive Per... 620 6.8e-71 2
TAIR|locus:2178148 - symbol:AT5G09910 species:3702 "Arabi... 493 8.8e-57 2
>TAIR|locus:505006713 [details] [associations]
symbol:LIP1 "Light Insensitive Period1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] InterPro:IPR001806
Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264
GO:GO:0003924 GO:GO:0009640 EMBL:AB019236 GO:GO:0032922
eggNOG:COG1100 InterPro:IPR025662 KO:K07976 EMBL:AF360203
EMBL:AY040050 IPI:IPI00544164 RefSeq:NP_568996.1 UniGene:At.19012
ProteinModelPortal:Q9C5J9 SMR:Q9C5J9 IntAct:Q9C5J9 PRIDE:Q9C5J9
EnsemblPlants:AT5G64813.1 GeneID:836603 KEGG:ath:AT5G64813
TAIR:At5g64813 HOGENOM:HOG000272685 InParanoid:Q9C5J9 OMA:VDIAPRD
PhylomeDB:Q9C5J9 ProtClustDB:PLN00023 Genevestigator:Q9C5J9
GermOnline:AT5G64813 Uniprot:Q9C5J9
Length = 342
Score = 620 (223.3 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 135/234 (57%), Positives = 154/234 (65%)
Query: 30 SGVIFVHDLSQRRTKTSLQKWAVEIATSGTFXXXXXXXXXXXXXXXXXXXXNKADVAAKE 89
+GVIFVHDLSQRRTKTSLQKWA E+A +GTF NKAD+AAKE
Sbjct: 109 NGVIFVHDLSQRRTKTSLQKWASEVAATGTFSAPLPSGGPGGLPVPYIVVGNKADIAAKE 168
Query: 90 GTRGSSGNLVDAARQWVEKQGXXXXXXXXXXXXXXX-GGGGLIAAAKEARYDKEAVMKFF 148
GT+GSSGNLVDAAR WVEKQG G GGLIAAAKE RYDKEA+ KFF
Sbjct: 169 GTKGSSGNLVDAARHWVEKQGLLPSSSEDLPLFESFPGNGGLIAAAKETRYDKEALNKFF 228
Query: 149 RMLIRRRYFSDEMPAPNPWSISPTH-KPIQRLDENSSDDDKFYS-SGYSSDPY---NMLP 203
RMLIRRRYFSDE+PA +PWSISP QRLDE +SDDD+FY + + DPY N +P
Sbjct: 229 RMLIRRRYFSDELPAASPWSISPVPTSSSQRLDEITSDDDQFYKRTSFHGDPYKYNNTIP 288
Query: 204 PLPAQRNXXXXXXXXXXXXVSVQENYNLPRFSLTGSQEISS--SARSKRTDINV 255
PLPAQRN VS +NY +PR+SL+ QE ++ SARSKR DINV
Sbjct: 289 PLPAQRNLTPPPTLYPQQPVSTPDNYTIPRYSLSSVQETTNNGSARSKRMDINV 342
Score = 116 (45.9 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 24/31 (77%), Positives = 25/31 (80%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGV 32
FW+ERERENKE P GQVRVLVVGDSGV
Sbjct: 3 FWRERERENKEQILAPLCGQVRVLVVGDSGV 33
>TAIR|locus:2178148 [details] [associations]
symbol:AT5G09910 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 EMBL:CP002688 GO:GO:0007264 InterPro:IPR025662
PROSITE:PS00675 KO:K07976 IPI:IPI00517543 RefSeq:NP_196553.2
UniGene:At.71651 ProteinModelPortal:F4KFD8 SMR:F4KFD8
EnsemblPlants:AT5G09910.1 GeneID:830852 KEGG:ath:AT5G09910
OMA:MRFWRER Uniprot:F4KFD8
Length = 333
Score = 493 (178.6 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 117/232 (50%), Positives = 138/232 (59%)
Query: 30 SGVIFVHDLSQRRTKTSLQKWAVEIATSGTFXXXXXXXXXXXXXXXXXXXXNKADVAAKE 89
+GVIFVHDLSQR TKT+LQKWA E++ +G F NKAD+AAK
Sbjct: 109 NGVIFVHDLSQRTTKTNLQKWAGEVSVTGEFSAPLSSGGPGGLPVPYIVIGNKADIAAKG 168
Query: 90 GTRGSSGNLVDAARQWVEKQGXXXXXXXXXXXXXXXGGGGLIAAAKEARYDKEAVMKFFR 149
GT GSSGNLVDAAR WVEKQG GLI AAKEARYDKEA+ K F
Sbjct: 169 GTNGSSGNLVDAARHWVEKQGLLPHSDELPLSESFPSNVGLIMAAKEARYDKEALTKIFH 228
Query: 150 MLIRRRYFSDEMPAPNP-WSISPTHKPIQRLDENSSDDDKFY--SSGYSSDPY--NMLPP 204
MLIRRRYFSDE+P+P+ WS+S H P QRLDE +SD+D+FY +S D Y N LP
Sbjct: 229 MLIRRRYFSDELPSPSSAWSLS--HAPSQRLDEGTSDEDQFYKRTSLREGDAYKYNTLP- 285
Query: 205 LPAQRNXXXXXXXXXXXXVSVQENYNLPRFSLTGSQEISS-SARSKRTDINV 255
Q N + NY +PRFSL+ +E S+ + RSKR DINV
Sbjct: 286 ---QHNLMQSPTLYPQQPPD-RYNYAIPRFSLSSVEETSNGNGRSKRMDINV 333
Score = 109 (43.4 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 22/31 (70%), Positives = 24/31 (77%)
Query: 2 FWKERERENKELNGGPPTGQVRVLVVGDSGV 32
FW+ER RENKE P GQ+RVLVVGDSGV
Sbjct: 3 FWRERGRENKEHMVAPLCGQIRVLVVGDSGV 33
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 255 208 0.00077 112 3 11 23 0.42 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 576 (61 KB)
Total size of DFA: 167 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.34u 0.12s 16.46t Elapsed: 00:00:00
Total cpu time: 16.34u 0.12s 16.46t Elapsed: 00:00:00
Start: Mon May 20 21:03:07 2013 End: Mon May 20 21:03:07 2013