BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025249
(255 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/245 (75%), Positives = 205/245 (83%), Gaps = 2/245 (0%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
++MLERD+GRPRGFGFIT+ADRRAMDDAIREMHGR+FGDRVISVNKAQPK+GG+ SDHGY
Sbjct: 37 QVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKIGGDDSDHGY 96
Query: 72 RGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGV 131
RGG + G G DRP GQD+CFKCGR GHWARDCPSA G GG GG SSRSRFGG
Sbjct: 97 RGGYSTGSRGGYGGGDRPAGQDECFKCGRSGHWARDCPSAGGR-GGGGGLISSRSRFGGA 155
Query: 132 GVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRY 191
G RGD GG RDRYIDDRYDGGRYGD+DR+DS+D+KYG RDRY SDRYPP GDR +GDRY
Sbjct: 156 GDRGDRFGGDRDRYIDDRYDGGRYGDKDRFDSRDNKYGGRDRYASDRYPPNGDRFSGDRY 215
Query: 192 GGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP- 250
GGSDRY NGYGK++GY+RDVG R G+DRY SGGP R+D YR+R APYDRPSRG P
Sbjct: 216 GGSDRYAQNGYGKDKGYDRDVGPRGGNDRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPS 275
Query: 251 SFDRY 255
SF+RY
Sbjct: 276 SFERY 280
>gi|356575516|ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
Length = 279
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/246 (70%), Positives = 192/246 (78%), Gaps = 1/246 (0%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +IM+ERD+GRPRGFGFIT+ADRR M+DAI+EMHGRE GDR+ISVNKAQPKMGG+ D
Sbjct: 35 ECQIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDVDQ 94
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
GYRGG S G DR G QDDCFKCGRPGHWARDCP A GGRG G SF SR RFG
Sbjct: 95 GYRGGYSSGGRGSYGAGDRVG-QDDCFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFG 153
Query: 130 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
G GD LGG RDRY+DDRY+GGRYGDRDR+D++D KYGSRDRY SDRYP +GDR A D
Sbjct: 154 AAGGNGDRLGGERDRYVDDRYEGGRYGDRDRFDNRDYKYGSRDRYASDRYPTSGDRFASD 213
Query: 190 RYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDR 249
RYGG YP NGYGKERGY+R G R G+DRY SG RD+GR YR R PYDRPSRG R
Sbjct: 214 RYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMGGRDEGRSYRGRPGPYDRPSRGSR 273
Query: 250 PSFDRY 255
PS DRY
Sbjct: 274 PSLDRY 279
>gi|255645278|gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/246 (70%), Positives = 192/246 (78%), Gaps = 1/246 (0%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +IM+ERD+GRPRGFGFIT+ADRR M+DAI+EMHGRE GDR+ISVNKAQPKMGG+ D
Sbjct: 35 ECQIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDVDQ 94
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
GYRGG S G DR G QDDCFKCGRPGHWARDCP A GGRG G SF SR RFG
Sbjct: 95 GYRGGYSSGGRGSYGAGDRVG-QDDCFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFG 153
Query: 130 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
G GD LGG RDRY+DDRY+GGRYGDRDR+D++D KYGSRDRY SDRYP +GDR A D
Sbjct: 154 AAGGNGDRLGGERDRYVDDRYEGGRYGDRDRFDNRDYKYGSRDRYASDRYPTSGDRFASD 213
Query: 190 RYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDR 249
RYGG YP NGYGKERGY+R G R G+DRY SG RD+GR YR R PYDRPSRG R
Sbjct: 214 RYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMGGRDEGRSYRGRPGPYDRPSRGFR 273
Query: 250 PSFDRY 255
PS DRY
Sbjct: 274 PSLDRY 279
>gi|296085963|emb|CBI31404.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/256 (71%), Positives = 206/256 (80%), Gaps = 5/256 (1%)
Query: 2 QQCLTHNNDLK-IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
Q C + + +L IMLERD+GRPRGFGFITYADRR M+DAIREMHGR+FGDR+ISVNKAQP
Sbjct: 42 QICSSFSFELVFIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQP 101
Query: 61 KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
KMG E DHGY GG S G G DR GQDDCFKCGRPGHWARDCPS+ GGRG G
Sbjct: 102 KMG-EDPDHGYNGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGA 160
Query: 121 SFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYP 180
F SRSRF G RGD GG RDRY++DRYDGGRYGDRDR++S+D+KYG+RDRYV+DRY
Sbjct: 161 PFPSRSRFSGG--RGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYA 218
Query: 181 PAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAP 240
P+GDR +GDRYGGSDRYP NGYGK+RGY+RD R G DRYA GG AR++GR YR+R P
Sbjct: 219 PSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGP 278
Query: 241 YDRPSRGDRP-SFDRY 255
YDRP+RG RP SFDRY
Sbjct: 279 YDRPNRGGRPSSFDRY 294
>gi|356536336|ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
Length = 279
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/246 (69%), Positives = 190/246 (77%), Gaps = 1/246 (0%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +IM+ERD+GRPRGFGFIT+ADRR M+DAI+EMHGRE GDR+ISVNKAQPKMGG+ +D
Sbjct: 35 ECQIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDADQ 94
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
GYRGG S G DR G QDDCFKCGRPGHWARDCP A GGRG G SF SR RFG
Sbjct: 95 GYRGGYSSGGRGSYGAGDRVG-QDDCFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFG 153
Query: 130 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
G GD LGG RDRY+DDRYDGGRYGDRDR+D++D KYGSRDRY DRYP +GDR A D
Sbjct: 154 AAGGHGDRLGGERDRYVDDRYDGGRYGDRDRFDNRDYKYGSRDRYAGDRYPTSGDRFASD 213
Query: 190 RYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDR 249
RYG YP NGYGKERGY+R G R G+DRY SG RD+GR YR R PYDRPSRG R
Sbjct: 214 RYGAGSDYPQNGYGKERGYDRYSGPRGGADRYGSGMGGRDEGRSYRGRPGPYDRPSRGSR 273
Query: 250 PSFDRY 255
S DRY
Sbjct: 274 SSLDRY 279
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/245 (73%), Positives = 201/245 (82%), Gaps = 4/245 (1%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IMLERD+GRPRGFGFITYADRR M+DAIREMHGR+FGDR+ISVNKAQPKMG E DHGY
Sbjct: 37 QIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMG-EDPDHGY 95
Query: 72 RGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGV 131
GG S G G DR GQDDCFKCGRPGHWARDCPS+ GGRG G F SRSRF G
Sbjct: 96 NGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGG 155
Query: 132 GVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRY 191
RGD GG RDRY++DRYDGGRYGDRDR++S+D+KYG+RDRYV+DRY P+GDR +GDRY
Sbjct: 156 --RGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRY 213
Query: 192 GGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP- 250
GGSDRYP NGYGK+RGY+RD R G DRYA GG AR++GR YR+R PYDRP+RG RP
Sbjct: 214 GGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPS 273
Query: 251 SFDRY 255
SFDRY
Sbjct: 274 SFDRY 278
>gi|147841866|emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
Length = 240
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/243 (73%), Positives = 199/243 (81%), Gaps = 4/243 (1%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 73
MLERD+GRPRGFGFITYADRR M+DAIREMHGR+FGDR+ISVNKAQPKMG E DHGY G
Sbjct: 1 MLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMG-EDPDHGYNG 59
Query: 74 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV 133
G S G G DR GQDDCFKCGRPGHWARDCPS+ GGRG G F SRSRF G
Sbjct: 60 GYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRF--SGG 117
Query: 134 RGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGG 193
RGD GG RDRY++DRYDGGRYGDRDR++S+D+KYG+RDRYV+DRY P+GDR +GDRYGG
Sbjct: 118 RGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYGG 177
Query: 194 SDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SF 252
SDRYP NGYGK+RGY+RD R G DRYA GG AR++GR YR+R PYDRP+RG RP SF
Sbjct: 178 SDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSF 237
Query: 253 DRY 255
DRY
Sbjct: 238 DRY 240
>gi|449449318|ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
gi|449487254|ref|XP_004157539.1| PREDICTED: uncharacterized protein LOC101231083 [Cucumis sativus]
Length = 286
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/255 (65%), Positives = 192/255 (75%), Gaps = 12/255 (4%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +IMLE+++GRPRGFGFIT++DRR MDDAIREMHG+EFG+R+ISVNKA+PKM GE DH
Sbjct: 35 DSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDH 93
Query: 70 ----GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSR 125
G G G G DR QD+CFKCGR GHWARDCPS GGRG G SF +R
Sbjct: 94 GYRGGGYSTGGRGSYGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLAR 153
Query: 126 SRFGGVGVRGDYLGGGRDRYIDDRYD-GGRYGDRDRYD--SKDSKYGSRDRYVSDRYPPA 182
SR G RGD G +RY+DDRYD GGR+GDRDR+D S+D+KYGSRDRYVSDRYPP
Sbjct: 154 SRLGDSD-RGDRFAGDANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPG 212
Query: 183 GDRLAGDRYGG-SDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPY 241
GDR RY SDR+PVNGYGK+RGY RD G R G D+Y SGGPARD+GR YR+R APY
Sbjct: 213 GDRFGSSRYTNDSDRFPVNGYGKDRGYYRDGGPR-GVDKYGSGGPARDEGRSYRNRPAPY 271
Query: 242 DRPSRGDRP-SFDRY 255
DRP+RG RP SFDRY
Sbjct: 272 DRPNRGGRPSSFDRY 286
>gi|255585355|ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 276
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/247 (69%), Positives = 194/247 (78%), Gaps = 6/247 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ ++MLERD+GRPRGFGFIT++DRR+MDDAIREMHGREFGDRVISVNKAQPKMG ++
Sbjct: 35 ECQVMLERDTGRPRGFGFITFSDRRSMDDAIREMHGREFGDRVISVNKAQPKMGDDLDHG 94
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
G S G G YG DRP GQD+CFKCGR GHWARDC ++ GGRGG G SFSSRSR G
Sbjct: 95 YRGGYSSSGGRGGGYGGDRPLGQDECFKCGRIGHWARDC-TSAGGRGGGGSSFSSRSRLG 153
Query: 130 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
G RGD G RDR++DDRYDGGR+GDRDR+DS+D KY SRDRY S+RYPP+GDR A D
Sbjct: 154 GASERGDRFAGDRDRFMDDRYDGGRFGDRDRFDSRD-KY-SRDRYASERYPPSGDRFASD 211
Query: 190 RYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDR 249
RYGGSDRY N YGK+RGYERD R GSDRY +GGP D R YRSR PY+RPSRG
Sbjct: 212 RYGGSDRYAHNSYGKDRGYERDAVTRGGSDRYGNGGPRGD--RSYRSRPGPYERPSRGGH 269
Query: 250 P-SFDRY 255
P SF+RY
Sbjct: 270 PSSFERY 276
>gi|449465308|ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 178/250 (71%), Positives = 203/250 (81%), Gaps = 5/250 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +IMLERD+GRPRGFGFIT+ADRR MDDAIREMHG+E G+R+ISVNKA+PKM G+ ++
Sbjct: 35 ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELGERIISVNKAEPKMEGDDTEQ 94
Query: 70 GYRGGGYSSGGRGSY--GADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSR 127
G+RGGGYSSGGR S+ G DR GQD+CFKCGRPGHWARDCPS GGRGG GSFSSRSR
Sbjct: 95 GFRGGGYSSGGRASFGRGKDRSVGQDECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSR 154
Query: 128 FGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLA 187
F G RGD GG RDRY+D+RY+GGRYGDRDR+D +D KYGSRDRY DRYP AGDR
Sbjct: 155 FDSDG-RGDRFGGDRDRYVDERYNGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFT 213
Query: 188 G-DRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSR 246
G DRY SDRYP NGY K+R Y+RD+G R+GSDRY SGGP R +GR YR R PYDRPSR
Sbjct: 214 GSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSR 273
Query: 247 GDRP-SFDRY 255
RP S+DRY
Sbjct: 274 VGRPSSYDRY 283
>gi|297806401|ref|XP_002871084.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
gi|297316921|gb|EFH47343.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 193/274 (70%), Gaps = 29/274 (10%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD- 68
D +IMLERD+GR RGFGFIT+ADRRAMD++IREMHGR+FGDRVISVN+A+PK+G + +
Sbjct: 35 DCQIMLERDTGRSRGFGFITFADRRAMDESIREMHGRDFGDRVISVNRAEPKLGRDDGES 94
Query: 69 HGYRGG---GYSSGGRGSYGADRPG--GQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS 123
HG RGG GYS G+GS+G G +D+CFKCGR GHWARDCPSA GGRGG G FS
Sbjct: 95 HGSRGGRDSGYSVTGKGSFGGGGGGRVAEDECFKCGRVGHWARDCPSAAGGRGGPVGGFS 154
Query: 124 SRS-RFGGVGVRGDYLGG-----GRDRYIDDRYDG-GRYGDRDRYDSKDSKYGSRDRYVS 176
SR+ FGG VR D R+RYIDDRYDG R+G RDR+DS+++ Y RDRY S
Sbjct: 155 SRAGAFGGSDVRVDRYADRDRYVDRERYIDDRYDGAARFGARDRFDSREA-YIPRDRYAS 213
Query: 177 DRYPPAGDRLA-GDRYG-GSDRYPVNGYGKERGYERDVGARAGSDRYA---SGGPAR--D 229
DRY DR A GDRY GSDRYP Y K R +ERD AGSDRY +GGP R +
Sbjct: 214 DRYAAQADRFAGGDRYSRGSDRYPPGSYDKARSFERDAVPSAGSDRYGGGRAGGPIRGGE 273
Query: 230 DGRGYRSRA-APYDRPSR----GDRPS---FDRY 255
+GRG+RSRA APY+RPSR G PS FDRY
Sbjct: 274 EGRGFRSRAGAPYERPSRSGGGGAYPSSSTFDRY 307
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 167/252 (66%), Gaps = 18/252 (7%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+ +IM+ +D+GRPRGFGFIT+ DRR D+AI+ MHGRE GDRVISVNKA+PK+GG+ D
Sbjct: 39 TECQIMVGKDTGRPRGFGFITFTDRRGADEAIKHMHGRELGDRVISVNKAEPKVGGDDVD 98
Query: 69 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF 128
H +GGGYSS G+GS +D+CFKC RPGHWARDCPS G G S + RSR
Sbjct: 99 HLQKGGGYSSRGKGS--------EDECFKCRRPGHWARDCPSTGGEGGRFRVSLAMRSRL 150
Query: 129 GGV-GVRGDY----LGGGRDRYI--DDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 181
G G R Y L RDRY+ DGGRY RDR++S D KY +RD Y +RY P
Sbjct: 151 GEFDGHRDRYGDRDLERERDRYMDGRRDRDGGRYSYRDRFESGD-KYEARDHYPFERYAP 209
Query: 182 AGDRLAGDRYGGSDRYPVNGY-GKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAP 240
GDR DRYG + + N Y G+ER Y+RD AR SDRY + GP RD+GR YRSR P
Sbjct: 210 PGDRFVSDRYGMPEHHLENEYRGRERSYDRDRYARDTSDRYGAMGPIRDEGRPYRSRPGP 269
Query: 241 YDRPSR-GDRPS 251
YDRPSR G RPS
Sbjct: 270 YDRPSRAGGRPS 281
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/277 (58%), Positives = 187/277 (67%), Gaps = 32/277 (11%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG-GEVSD 68
D +IMLERD+GR RGFGFIT+ADRRAMD++IREMHGR+FGDRVISVN+A+PK+G +
Sbjct: 35 DCQIMLERDTGRSRGFGFITFADRRAMDESIREMHGRDFGDRVISVNRAEPKLGRDDGES 94
Query: 69 HGYRGG---GYSSG----GRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGS 121
HG RGG GYS G G G+D+CFKCGR GHWARDCPSA GGRGG G
Sbjct: 95 HGSRGGRDSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGG 154
Query: 122 FSSR-SRFGGVGVRGDYLGG-----GRDRYIDDRYDG-GRYGDRDRYDSKDSKYGSRDRY 174
FSSR S +GG R D R+RYIDDRYDG RYG RDR+DS+++ Y RDRY
Sbjct: 155 FSSRASAYGGSDGRVDRYADRDRYVDRERYIDDRYDGAARYGARDRFDSREA-YIPRDRY 213
Query: 175 VSDRYPPAGDRLA-GDRYG-GSDRYPVNGYGKERGYERDVGARAGSDRYA---SGGPA-- 227
SDRY DR A GDRY GSDRYP Y K R +ERD+ AGSDRY +GGP
Sbjct: 214 ASDRYAAPADRFAGGDRYSRGSDRYPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRG 273
Query: 228 -RDDGRGYRSRA-APYDRPSR----GDRPS---FDRY 255
++GRG+RSRA APY+RPSR G PS FDRY
Sbjct: 274 GGEEGRGFRSRAGAPYERPSRSGGGGAYPSSSTFDRY 310
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 159/265 (60%), Gaps = 38/265 (14%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+ +IM+ RD+GRPRGFGFIT+ DRR DDAI+ MHGRE G++VISVNKA+PK+GGE D
Sbjct: 39 TECQIMVGRDTGRPRGFGFITFTDRRGADDAIKHMHGRELGNKVISVNKAEPKVGGEDVD 98
Query: 69 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF 128
+GGGYSS G+G+ +D+CFKC RPGHWARDCPS R + RSR
Sbjct: 99 QLKKGGGYSSRGKGT--------EDECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRI 150
Query: 129 GGVGVRGDYLGGGRDRY--------------------IDDRYDGGRYGDRDRYDSKDSKY 168
G + G RDRY DGGRY RDR+DS D KY
Sbjct: 151 GDI-------DGHRDRYGDRDLEREREREREFDRYMDGRRDRDGGRYSYRDRFDSGD-KY 202
Query: 169 GSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGY-GKERGYERDVGARAGSDRYASGGPA 227
RD Y +RY P GDR DRYG + + N Y G+ER Y+RD AR SDRY GP
Sbjct: 203 EPRDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSYDRDRYARDTSDRYGDMGPI 262
Query: 228 RDDGRGYRSRAAPYDRPSR-GDRPS 251
RD+GR YRSR PYDRPSR G RPS
Sbjct: 263 RDEGRPYRSRPGPYDRPSRPGGRPS 287
>gi|227206224|dbj|BAH57167.1| AT5G04280 [Arabidopsis thaliana]
Length = 272
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 160/273 (58%), Positives = 184/273 (67%), Gaps = 32/273 (11%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG-GEVSDHGYR 72
MLERD+GR RGFGFIT+ADRRAMD++IREMHGR+FGDRVISVN+A+PK+G + HG R
Sbjct: 1 MLERDTGRSRGFGFITFADRRAMDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSR 60
Query: 73 GG---GYSSG----GRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSR 125
GG GYS G G G+D+CFKCGR GHWARDCPSA GGRGG G FSSR
Sbjct: 61 GGRDSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSR 120
Query: 126 -SRFGGVGVRGDYLGG-----GRDRYIDDRYDG-GRYGDRDRYDSKDSKYGSRDRYVSDR 178
S +GG R D R+RYIDDRYDG RYG RDR+DS+++ Y RDRY SDR
Sbjct: 121 ASAYGGSDGRVDRYADRDRYVDRERYIDDRYDGAARYGARDRFDSREA-YIPRDRYASDR 179
Query: 179 YPPAGDRLA-GDRYG-GSDRYPVNGYGKERGYERDVGARAGSDRYA---SGGPA---RDD 230
Y DR A GDRY GSDRYP Y K R +ERD+ AGSDRY +GGP ++
Sbjct: 180 YAAPADRFAGGDRYSRGSDRYPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEE 239
Query: 231 GRGYRSRA-APYDRPSR----GDRPS---FDRY 255
GRG+RSRA APY+RPSR G PS FDRY
Sbjct: 240 GRGFRSRAGAPYERPSRSGGGGAYPSSSTFDRY 272
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 156/282 (55%), Gaps = 49/282 (17%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +IMLER + R RGFGF+T++D RA++ AI EMH +E R ISVN+A+PKM D
Sbjct: 35 DAQIMLERHTNRHRGFGFVTFSDPRAVESAISEMHTKELDGRTISVNRAEPKM--NTDDT 92
Query: 70 GYRGGGYSSGGRGSY--GADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSR 127
Y GG RG Y G +C++CGR GHWARDCP+ GGR G S+
Sbjct: 93 RYSSGGDRGADRGDYRGGKGDGPPPGNCYQCGRAGHWARDCPNPAGGRSG-----QLSSK 147
Query: 128 FGGVGVRGDYLGGG---RDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 184
F G G RGD G DRY+DDRYDGGRYG RD D++D G RDRY SDRYP GD
Sbjct: 148 FSGGGGRGDRFSGSDRFSDRYMDDRYDGGRYGYRDPIDNRDRYDGGRDRYASDRYPSGGD 207
Query: 185 RLAGDRYGGSDRYPVNGYG--KERGYERDV----------GAR----------------- 215
R DRYGG DRY +GYG +ER YERD G R
Sbjct: 208 RFGADRYGGPDRYQPSGYGRERERSYERDAVRGGAAFDRSGPRGGASYDRDGPRGGIGGG 267
Query: 216 --------AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDR 249
G+D Y SGGPAR DG YR R PYDRPSRG R
Sbjct: 268 YDRDGPRGGGADNYVSGGPARYDGGSYRDRPGPYDRPSRGGR 309
>gi|413933427|gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 157/279 (56%), Gaps = 51/279 (18%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D++IMLER + R RGFGF+T+ DRRA+D AI+EM G+E R ISVNKA+PKM + +
Sbjct: 35 DVQIMLERHTYRHRGFGFVTFEDRRAVDSAIKEMRGQELDGRTISVNKAEPKMNTDDT-- 92
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
R G G +C++CGRPGHW RDCPSA GGR G F S+ G
Sbjct: 93 --RFDSGGGRGEYRGGRGDGPPPGNCYECGRPGHWVRDCPSAAGGRSG---RFPSKFSGG 147
Query: 130 GVGVRGDYLGGG---RDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRL 186
G RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD
Sbjct: 148 G---RGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHF 204
Query: 187 AGDRYGGS-DRYPVNGYG--KERGYERD----------VGARAG---------------- 217
GDRYGG DRY NGYG +ER YERD G+R G
Sbjct: 205 DGDRYGGGLDRYAPNGYGRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGY 264
Query: 218 ---------SDRYASGGPARDDGRGYRSRAAPYDRPSRG 247
+DRY GGPAR DG YR R PYDRPSRG
Sbjct: 265 VRDGPRGGVADRYGGGGPARYDGGSYRERPGPYDRPSRG 303
>gi|326507358|dbj|BAK03072.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 165/275 (60%), Gaps = 45/275 (16%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +++ ERD+GR RGFGF+T+++ RA+D AIREMH E R ISVNKAQP++ +
Sbjct: 35 ETQVVTERDTGRSRGFGFVTFSEPRAVDVAIREMHNGELDGRTISVNKAQPRVNSNDGGY 94
Query: 70 GYRGGGYSSGGRGSY--GAD-RPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRS 126
GY G YSSG RG Y AD P DDCFKCGRPGHWAR+CP +VGGR G +S S
Sbjct: 95 GYGGSSYSSGARGGYRGAADIVPAASDDCFKCGRPGHWARECPYSVGGR---PGRYSPPS 151
Query: 127 RF-GGVGVRGDYLGGG---RDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPA 182
R+ G G RGD GG +RY+DDRYDGGRY D DRY G R DRYPPA
Sbjct: 152 RYVNGAGGRGDRFGGSDRFANRYVDDRYDGGRYAD-DRYG------GGR-----DRYPPA 199
Query: 183 GDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGS----------------------DR 220
DR +GDRYGG DRY G+ +ER YERD G GS DR
Sbjct: 200 ADRFSGDRYGGGDRYASGGFARERSYERDGGRPGGSYYRDEPRGTGGYGRGGPRVANGDR 259
Query: 221 YASGGPARDDGRGYRSRAAPYDRPSRGDRPSFDRY 255
Y S GPAR G YR R APYDRP+RG R +RY
Sbjct: 260 YGSAGPARLGG-SYRDRPAPYDRPTRGARSYDERY 293
>gi|212275991|ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea mays]
gi|194688516|gb|ACF78342.1| unknown [Zea mays]
Length = 311
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 157/279 (56%), Gaps = 51/279 (18%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D++IMLER + R RGFGF+T+ DRRA+D AI+EM G+E R ISVNKA+PKM + +
Sbjct: 35 DVQIMLERHTYRHRGFGFVTFEDRRAVDSAIKEMRGQESDGRTISVNKAEPKMNTDDT-- 92
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
R G G +C++CGRPGHW RDCPSA GGR G F S+ G
Sbjct: 93 --RFDSGGGRGEYRGGRGDGPPPGNCYECGRPGHWVRDCPSAAGGRSG---RFPSKFSGG 147
Query: 130 GVGVRGDYLGGG---RDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRL 186
G RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD
Sbjct: 148 G---RGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHF 204
Query: 187 AGDRYGGS-DRYPVNGYG--KERGYERD----------VGARAG---------------- 217
GDRYGG DRY NGYG +ER YERD G+R G
Sbjct: 205 DGDRYGGGLDRYAPNGYGRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGY 264
Query: 218 ---------SDRYASGGPARDDGRGYRSRAAPYDRPSRG 247
+DRY GGPAR DG YR R PYDRPSRG
Sbjct: 265 VRDGPRGGVADRYGGGGPARYDGGSYRERPGPYDRPSRG 303
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 154/267 (57%), Gaps = 36/267 (13%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +IM+ER + R RGFGF+T+ DRRA+D AI+EMHG+E R ISVNKA+PKM + +
Sbjct: 35 DAQIMVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAEPKMNTDDT-- 92
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
R G G G +CF+CGRPGHW RDCPSA GGR G S S G
Sbjct: 93 --RYAGGGGRGEYRGGRGDGPPPGNCFECGRPGHWVRDCPSAAGGRSGRFPSKFS----G 146
Query: 130 GVGV-RGDYLGGGR---DRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDR 185
G GV RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD
Sbjct: 147 GSGVGRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQADARDRYAGGRDRYANDRYPSGGDH 206
Query: 186 LAGDRY-GGSDRYPVNGYG--KERGYERDVGAR---AGSDRYASGGP------------- 226
GDRY GG D Y +GYG +ER YERD G R G Y GP
Sbjct: 207 FGGDRYGGGPDCYVPSGYGRERERSYERD-GVRGGGGGGGGYDRSGPRGGGGYDRDGPRG 265
Query: 227 ----ARDDGRGYRSRAAPYDRPSRGDR 249
AR DG YR R PYDRPSRG R
Sbjct: 266 GGGSARYDGGNYRERPGPYDRPSRGGR 292
>gi|413933428|gb|AFW67979.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 273
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/275 (48%), Positives = 153/275 (55%), Gaps = 51/275 (18%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 73
MLER + R RGFGF+T+ DRRA+D AI+EM G+E R ISVNKA+PKM + + R
Sbjct: 1 MLERHTYRHRGFGFVTFEDRRAVDSAIKEMRGQELDGRTISVNKAEPKMNTDDT----RF 56
Query: 74 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV 133
G G +C++CGRPGHW RDCPSA GGR G F S+ GG
Sbjct: 57 DSGGGRGEYRGGRGDGPPPGNCYECGRPGHWVRDCPSAAGGRSG---RFPSKFSGGG--- 110
Query: 134 RGDYLGGG---RDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDR 190
RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD GDR
Sbjct: 111 RGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHFDGDR 170
Query: 191 YGGS-DRYPVNGYG--KERGYERD----------VGARAG-------------------- 217
YGG DRY NGYG +ER YERD G+R G
Sbjct: 171 YGGGLDRYAPNGYGRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGYVRDG 230
Query: 218 -----SDRYASGGPARDDGRGYRSRAAPYDRPSRG 247
+DRY GGPAR DG YR R PYDRPSRG
Sbjct: 231 PRGGVADRYGGGGPARYDGGSYRERPGPYDRPSRG 265
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/299 (49%), Positives = 170/299 (56%), Gaps = 60/299 (20%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
+M+ERD+GRPRGFGFIT+AD RAM+DAIREMHGRE RVISVNKAQPKMG E S +GY
Sbjct: 38 VMMERDTGRPRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPKMGSEDSGYGYG 97
Query: 73 GGGYSSG------------------------------------------------GRGSY 84
SG GR SY
Sbjct: 98 RDHMPSGRDHAPGGRDHATSGRDRISGGRDHMPGGRDHFPGGRDHFPGGRDRMLGGRDSY 157
Query: 85 -GADRPGGQ-DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSR--FGGVGVRGDYLGG 140
G D+P G+ DDCFKCGRPGHWARDCPS G G GG FSS S+ GG G G
Sbjct: 158 RGVDKPVGRSDDCFKCGRPGHWARDCPSGDGV-GSGGGRFSSHSKFGGGGGGGGGGRGDR 216
Query: 141 GRDRYIDDRYDGGRY-GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPV 199
DD +DGGRY GDR+R DS+D++YG RDRY +DRY P GDR GDRY DR
Sbjct: 217 FGGDRYDDHFDGGRYGGDRERTDSRDNRYG-RDRYNNDRYQPGGDRFGGDRY--MDRDTQ 273
Query: 200 NGY-GKERGYERDVGAR-AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 255
NGY GK++GY R+ G R G + GGPAR D YR R PYDR + RP S+DRY
Sbjct: 274 NGYNGKDKGYNREGGPRGGGDKYGSGGGPARFDRGSYRDRPGPYDRSRKAGRPSSYDRY 332
>gi|414872129|tpg|DAA50686.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 259
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 151/263 (57%), Gaps = 36/263 (13%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 73
M+ER + R RGFGF+T+ DRRA+D AI+EMHG+E R ISVNKA+PKM + + R
Sbjct: 1 MVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAEPKMNTDDT----RY 56
Query: 74 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV 133
G G G +CF+CGRPGHW RDCPSA GGR G S S GG GV
Sbjct: 57 AGGGGRGEYRGGRGDGPPPGNCFECGRPGHWVRDCPSAAGGRSGRFPSKFS----GGSGV 112
Query: 134 -RGDYLGGGR---DRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD GD
Sbjct: 113 GRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQADARDRYAGGRDRYANDRYPSGGDHFGGD 172
Query: 190 RY-GGSDRYPVNGYG--KERGYERDVGAR---AGSDRYASGGP----------------- 226
RY GG D Y +GYG +ER YERD G R G Y GP
Sbjct: 173 RYGGGPDCYVPSGYGRERERSYERD-GVRGGGGGGGGYDRSGPRGGGGYDRDGPRGGGGS 231
Query: 227 ARDDGRGYRSRAAPYDRPSRGDR 249
AR DG YR R PYDRPSRG R
Sbjct: 232 ARYDGGNYRERPGPYDRPSRGGR 254
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 154/278 (55%), Gaps = 41/278 (14%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +++LERD+GR RGFGF+T+++ RA+D AIR MH E R ISVNKAQP+M +
Sbjct: 35 ETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGMHNGELDGRTISVNKAQPRMNTDDGYG 94
Query: 70 GYRGGGYSSGGRGSYGADR-------PGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSF 122
GGG P DDCFKCGR GHWAR+CP + GG GG G +
Sbjct: 95 YGGGGGGGGTYSSGARGGYRGGGDAVPSANDDCFKCGRAGHWARECPYSSGGGGGRTGRY 154
Query: 123 SSRSRFGGVGVRGDYLGGGR-----DRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSD 177
S SR+G G G +RY+DDRYDGGRY D DRY G RDRY +D
Sbjct: 155 SPPSRYGSGTGGGRGDRFGGSDRFANRYVDDRYDGGRYVD-DRYGG-----GGRDRYATD 208
Query: 178 RYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGS------------------- 218
RYPP DR GDRYGGSDRY +G+ +ER YERD G GS
Sbjct: 209 RYPPTADRFTGDRYGGSDRYASSGFTRERSYERDGGRSGGSYYRDEPRGSGGYDRGGMRM 268
Query: 219 ---DRYASGGPARDDGRGYRSRAAPYDRPSRGDRPSFD 253
DRY +GGPAR G YR R APYDRPSR ++D
Sbjct: 269 GSGDRYGTGGPARFAG-SYRDRPAPYDRPSRAAARTYD 305
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ ++MLERD+GRPRGFGFIT+ADRRAMDDAIREMHGR+FGDRVISVNKAQPKMGG+ SDH
Sbjct: 31 ECQVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFGDRVISVNKAQPKMGGDDSDH 90
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
GYRGG + G G DRP GQD+CFKCGR GHWARDCPSA GG G SSRSRFG
Sbjct: 91 GYRGGYSTGSRGGYGGGDRPAGQDECFKCGRSGHWARDCPSAGARGGGGGLL-SSRSRFG 149
Query: 130 GVGVRGDYLGG 140
G G RGD GG
Sbjct: 150 GAGDRGDRFGG 160
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 142/269 (52%), Gaps = 73/269 (27%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +++ ERD+GR RGFGF+T+++ RA D AIREMH E R ISVNKAQP+M + +
Sbjct: 35 ETQVVTERDTGRSRGFGFVTFSEPRAADAAIREMHNGELDGRTISVNKAQPRMNTDDGGY 94
Query: 70 GYRGGGYSSGGRGSYGADR---PGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRS 126
GY GGGYSSG RG Y P DDCFKCGRPGHWAR+CP A GGR G+
Sbjct: 95 GYGGGGYSSGARGGYRGAGDAVPAASDDCFKCGRPGHWARECPYADGGRPGS-------- 146
Query: 127 RFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRL 186
RY DDRY GR DRYPPA DR
Sbjct: 147 -----------------RYADDRYSSGR----------------------DRYPPAADRF 167
Query: 187 AGDRYGGSDRYPVNGYGKERGYERDVGARAGS----------------------DRYASG 224
+GDRY G+DRY G+ +ER YERD G GS DRY SG
Sbjct: 168 SGDRYAGADRYASGGFARERSYERDGGRPGGSYYRDEPRATGGYGRGGPRVANGDRYGSG 227
Query: 225 GPARDDGRGYRSRAAPYDRPSRGDRPSFD 253
GPAR G YR R APYDRPSRG S+D
Sbjct: 228 GPARFGG-SYRDRPAPYDRPSRGAARSYD 255
>gi|242043176|ref|XP_002459459.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
gi|241922836|gb|EER95980.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
Length = 301
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 152/275 (55%), Gaps = 56/275 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE---- 65
+ ++++ER++GR RGFGF+T+++ RA+D AIR MH E R ISVNKAQP+ +
Sbjct: 35 EAQVVVERETGRSRGFGFVTFSEPRAVDAAIRGMHNGELDGRNISVNKAQPRNSDDGYGY 94
Query: 66 -----VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
GGY SGG P DDCFKCGRPGHWAR+CP + G G G
Sbjct: 95 GGGGGGGYSSGARGGYRSGGDVV-----PAASDDCFKCGRPGHWARECPYSDG--SGRTG 147
Query: 121 SFSSRSRFGGVGVRGDYLGGGRD---RYIDDRYDGGRYGDRDRYDSKDSKYGS-RDRYVS 176
+S SR+GG GG D RY DDRYDGGRY DS+D+ YG+ RDRY S
Sbjct: 148 RYSPASRYGGGTGGRGDRFGGSDRFARYDDDRYDGGRY-----VDSRDTYYGAGRDRYAS 202
Query: 177 DRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDD------ 230
DRY PA DR +GDRY G+DRY +G+ +ER YERD G ++GG RDD
Sbjct: 203 DRYAPAADRYSGDRYSGADRYASSGFARERSYERDGGR-------SNGGYYRDDPRGTGG 255
Query: 231 ------------------GRGYRSRAAPYDRPSRG 247
G YR R APYDRPSRG
Sbjct: 256 YGRGGSRGGGGGGGPARFGGSYRDRPAPYDRPSRG 290
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 145/288 (50%), Gaps = 68/288 (23%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +IMLER + R RGFGF+T++D A+D AI+EMH +E R ISVNKA+PKM + +
Sbjct: 35 DAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKEMHCQELDGRTISVNKAEPKMNTDDT-- 92
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGR-----------GGA 118
R G G +CF+CGR GHWARDCP+ GGR GG
Sbjct: 93 --RYESGGGRGEYRGGRGDGPPPGNCFECGRAGHWARDCPNPGGGRSARYSSSKFSAGGR 150
Query: 119 GGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDR 178
G FS RFG DRY+DDRYDGG R+ D +D G RDRY +DR
Sbjct: 151 GDRFSGSDRFG-------------DRYMDDRYDGGY---REPVDVRDRYGGGRDRYANDR 194
Query: 179 YPPAGDRLAGDRYGGSDRYPVNGYG--KERGYERD-VGARAGSDRY-------------- 221
YP GDR DRYGG DRY + YG +ER YERD V G DR
Sbjct: 195 YPSGGDRYVPDRYGGPDRYQPSSYGRERERSYERDGVRGNGGYDRSGPRGGGSYDRDGPR 254
Query: 222 --ASGG------------------PARDDGRGYRSRAAPYDRPSRGDR 249
SGG PAR DG YR R+ PYDRPSRG R
Sbjct: 255 GGISGGYDRDGPRGGGVDRYGGGGPARYDGGSYRDRSGPYDRPSRGGR 302
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 120/215 (55%), Gaps = 33/215 (15%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +IMLER + R RGFGF+T++D A+D AI+EMH +E R ISVNKA+PKM + +
Sbjct: 35 DAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKEMHCQELDGRTISVNKAEPKMNTDDT-- 92
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGR-----------GGA 118
R G G +CF+CGR GHWARDCP+ GGR GG
Sbjct: 93 --RYESGGGRGEYRGGRGDGPPPGNCFECGRAGHWARDCPNPGGGRSARYSSSKFSAGGR 150
Query: 119 GGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDR 178
G FS RFG DRY+DDRYDGG R+ D +D G RDRY +DR
Sbjct: 151 GDRFSGSDRFG-------------DRYMDDRYDGGY---REPVDVRDRYGGGRDRYANDR 194
Query: 179 YPPAGDRLAGDRYGGSDRYPVNGYG--KERGYERD 211
YP GDR DRYGG DRY + YG +ER YERD
Sbjct: 195 YPSGGDRYVPDRYGGPDRYQPSSYGRERERSYERD 229
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/118 (70%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
+M+ERD+GRPRGFGFIT+AD RAM+DAIREMHGRE RVISVNKAQPKMG E S +GY
Sbjct: 38 VMMERDTGRPRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPKMGSEDSGYGYG 97
Query: 73 GGGYSSGGRGSY-GADRPGGQ-DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF 128
G GGR SY G D+P G+ DDCFKCGRPGHWARDCPS G G GG FSS S+F
Sbjct: 98 GRDRMLGGRDSYRGVDKPVGRSDDCFKCGRPGHWARDCPSG-DGVGSGGGRFSSHSKF 154
>gi|226502460|ref|NP_001151678.1| LOC100285313 [Zea mays]
gi|195648731|gb|ACG43833.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|223972767|gb|ACN30571.1| unknown [Zea mays]
Length = 293
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 146/267 (54%), Gaps = 47/267 (17%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG--GEVS 67
+ ++++ER++GR RGFGF+T+++ RA+D AIR MH E R ISVNKA+P+
Sbjct: 35 EAQVVVERETGRSRGFGFVTFSEPRAVDAAIRGMHNGELDGRNISVNKAEPRNSDGYGYG 94
Query: 68 DHGYRGGGYSSGGRGSYGAD-RPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRS 126
G G G GAD P DDCFKCGRPGHWAR+CP + G G G +S S
Sbjct: 95 GGGGGGYSSGGRGGYRSGADVVPAASDDCFKCGRPGHWARECPYSDG--SGRTGRYSPGS 152
Query: 127 RFGGVGVRGDYLGGGRD---RYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAG 183
R+GG GG D RY DDRYDGGRY DS+D+ YGS DRY PA
Sbjct: 153 RYGGGTGGRGDRFGGSDRFARYDDDRYDGGRY-----VDSRDTYYGS----GRDRYAPAA 203
Query: 184 DRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDD------------- 230
+R +GDRY G+DRY +G+ +ER YERD G ++GG RD+
Sbjct: 204 ERYSGDRYSGADRYASSGFARERSYERDGGR-------SNGGYYRDEPRGTGGYGRGGSR 256
Query: 231 ----------GRGYRSRAAPYDRPSRG 247
G YR R APYDRPSRG
Sbjct: 257 GGGGGGPARFGGSYRDRPAPYDRPSRG 283
>gi|226502290|ref|NP_001150604.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640520|gb|ACG39728.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|414591943|tpg|DAA42514.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 316
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 146/281 (51%), Gaps = 52/281 (18%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM------- 62
+ +++++R++GR RGFGF+T+++ RA+D AIR MH E R ISVNKA P++
Sbjct: 35 EAQVVVKRETGRSRGFGFVTFSEPRAVDAAIRGMHNAELDGRNISVNKAHPRIADDDYGY 94
Query: 63 -------GGEVSDHGYRGGG----------YSSGGRGSYGADRPGGQDDCFKCGRPGHWA 105
+ GYR GG + G G P D+CFKCGR GHWA
Sbjct: 95 GGGGGGGYSSGARGGYRSGGDVVPAVSDECFKCGHSGHDVV--PAVSDECFKCGRSGHWA 152
Query: 106 RDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRD---RYIDDRYDGGRYGDRDRYD 162
R+CP + G G G +S SR+GG GG D RY DDRYDGGR D
Sbjct: 153 RECPYSDG--SGRTGRYSPASRYGGGAGGRGDRVGGSDRFARYDDDRYDGGR-----SVD 205
Query: 163 SKDSKYGS-RDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGS--- 218
S+D+ YG+ RDRY DR+ PA D +GDRY G+DRY +G+ ER YERD G G+
Sbjct: 206 SRDTYYGAGRDRYARDRHLPATDHHSGDRYSGADRYTSSGFAIERSYERDGGRSTGTYYR 265
Query: 219 ------------DRYASGGPARDDGRGYRSRAAPYDRPSRG 247
GG G YR R APYDRPSRG
Sbjct: 266 DDPRGTGGYGRGGSRGGGGGPARFGGSYRDRPAPYDRPSRG 306
>gi|147817638|emb|CAN64497.1| hypothetical protein VITISV_004037 [Vitis vinifera]
Length = 480
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 86/158 (54%), Gaps = 54/158 (34%)
Query: 2 QQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
Q CL + K+M+ERD+GRPRGFGFIT+AD RAM+DAIREMHGRE RVISVNKAQPK
Sbjct: 174 QSCL----NTKVMMERDTGRPRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPK 229
Query: 62 MGGEVSDHGYRGGGYSSG------------------------------------------ 79
MG E S +GY SG
Sbjct: 230 MGSEDSGYGYGRDHMPSGRDHAPGGRDHATSGRDRISGGRDHMPGGRDHFPGGRDHFPGG 289
Query: 80 ------GRGSY-GADRPGGQ-DDCFKCGRPGHWARDCP 109
GR SY G D+P G+ DDCFKCGRPGHWARDCP
Sbjct: 290 RDRMLGGRDSYRGVDKPVGRSDDCFKCGRPGHWARDCP 327
>gi|21954079|gb|AAK92787.2| putative RNA binding protein [Arabidopsis thaliana]
Length = 182
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 99/184 (53%), Gaps = 30/184 (16%)
Query: 90 GGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRY---- 145
G +D+CFKC RPGHWARDCPS R + RSR G + G RDRY
Sbjct: 2 GTEDECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDID-------GHRDRYGDRD 54
Query: 146 ----------------IDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
DGGRY RDR+DS D KY RD Y +RY P GDR D
Sbjct: 55 LEREREREREFDRYMDGRRDRDGGRYSYRDRFDSGD-KYEPRDHYPFERYAPPGDRFVSD 113
Query: 190 RYGGSDRYPVNGY-GKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSR-G 247
RYG + + N Y G+ER Y+RD AR SDRY GP RD+GR YRSR PYDRPSR G
Sbjct: 114 RYGMPEHHLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPG 173
Query: 248 DRPS 251
RPS
Sbjct: 174 GRPS 177
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 126/247 (51%), Gaps = 42/247 (17%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
H + K++L++ SGR RGFGFIT+ +++AMD+AI M+G + R I+V+KAQP GG
Sbjct: 32 HLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAG 91
Query: 67 SDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRS 126
D+ G R G DCFKCG+PGH+AR+CPS G GG FSS+
Sbjct: 92 RDNDGDRGRDRGYDRDRSRPSGGRGGGDCFKCGKPGHFARECPSESSRDG--GGRFSSKD 149
Query: 127 RFGGVGVRGDYLGGGRDRYI--DDRYDGG--RYGDR-DRYDSKDSKYGSRDRYVSDRYPP 181
DRY DDRY RYG + DRY +KD +Y S+D DRY
Sbjct: 150 ----------------DRYSSKDDRYGAKDDRYGAKEDRYGAKDDRYSSKD----DRYSS 189
Query: 182 AGDRLAGDRYGGSDRYPVNGYGKERGYERDVG-ARAGSDRYASGGPARDDGRGYRSRAAP 240
DR G R GG R YG +R ER G +R G R A GG R AP
Sbjct: 190 KDDRY-GSRDGGGSR-----YGPDRSGERAGGRSRDGGSRGAPGGE--------RHSRAP 235
Query: 241 YDRPSRG 247
YDRP G
Sbjct: 236 YDRPRAG 242
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 123/249 (49%), Gaps = 44/249 (17%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
H + K++L++ SGR RGFGFIT+ +++AMD+AI M+G + R I+V+KAQP GG
Sbjct: 32 HLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGSG 91
Query: 67 SDHG---YRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS 123
DH R GY R G DCFKCG+PGH+AR+CPS S
Sbjct: 92 RDHDGDRSRDRGYD---RDRSRPSGGRGGGDCFKCGKPGHFARECPSE-----------S 137
Query: 124 SRSRFGGVGVRGDYLGGGRDRYIDDRYDGG--RYGDR-DRYDSKDSKYGSRDRYVSDRYP 180
SR GGGR DDRY RYG + DRY SKD +Y S+D DRY
Sbjct: 138 SRD------------GGGRYSSKDDRYSAKDDRYGAKEDRYGSKDDRYSSKD----DRYS 181
Query: 181 PAGDR--LAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRA 238
DR + DRYG D G G G +R G RAG G G +
Sbjct: 182 AKDDRYGVKDDRYGSRD-----GGGSRYGPDR-SGERAGGRSRDGGSRGGPGGERHSRAT 235
Query: 239 APYDRPSRG 247
APYDRP G
Sbjct: 236 APYDRPRAG 244
>gi|226528928|ref|NP_001149053.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195624344|gb|ACG34002.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 271
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 119/258 (46%), Gaps = 54/258 (20%)
Query: 42 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR-PGGQDDCFKCGR 100
E R + R I+VNKA+P++ G G + G G D P D+CFKCG
Sbjct: 6 ECIMRNWMARNITVNKAKPRIADYGYGGGGGGYSSGARGGYRSGGDVVPAVSDECFKCGL 65
Query: 101 PGHWARDCPSAVGGRGGAGGSFSSRSRFGG-VGVRGDYLGGG--RDRYIDDRYDGGRYGD 157
GHWAR CP + G G G +S SR+GG G GD GG RY DDRYDGGRY D
Sbjct: 66 SGHWARQCPYSDGS--GRTGRYSPASRYGGGTGRHGDRFGGSDRFARYDDDRYDGGRYVD 123
Query: 158 ---------RDRYDS---------------------KDSKYGSRDRYVSDRYPPAGDRLA 187
RDRY + S + RDRY +DR+PPA DR +
Sbjct: 124 SRDTYYGAGRDRYANDRHPPATDLYSGDRYSGADRYASSGFAGRDRYANDRHPPATDRYS 183
Query: 188 GDRYGGSDRYPVNGYGKERGYERDVGARAGS------------------DRYASGGPARD 229
GDRY G+ R +G+ +ER YERD G G+ GG
Sbjct: 184 GDRYSGARRSASSGFARERSYERDGGRSTGTYYRDVPRGTGGYGRGGSRGGSGGGGGPAR 243
Query: 230 DGRGYRSRAAPYDRPSRG 247
G YR R APYDRPSRG
Sbjct: 244 FGGSYRDRPAPYDRPSRG 261
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 99/176 (56%), Gaps = 15/176 (8%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
H + K++L++ SGR RGFGFIT+ +++AMD+AI M+G + R I+V+KAQP GG
Sbjct: 32 HLLEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGSG 91
Query: 67 SDHG---YRGG-GYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSF 122
DH RG GY G R G DCFKCG+PGH+AR+CPS GG S
Sbjct: 92 RDHDGDRSRGDRGYDRDRSRPSGGGRGSGGGDCFKCGKPGHFARECPSETSRGGGGRYSG 151
Query: 123 SSRSRFGG----VGVRGDYLGGGRDRY--IDDRYDGGRYGDRDRYDSKDSKYGSRD 172
R+ G G + D G DRY DDRY G DRY +KD +YG++D
Sbjct: 152 KD-DRYSGNDDRYGGKEDRYGAKEDRYGGKDDRYSGK----DDRYSAKDDRYGAKD 202
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ +++LERD+GR RGFGF+T+++ RA+D AIR MH E R ISVNKAQP+M +
Sbjct: 35 ETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGMHNGELDGRTISVNKAQPRMNTDDGYG 94
Query: 70 GYRGGGYSSGGRGSYGADR-------PGGQDDCFKCGRPGHWARDCP 109
GGG P DDCFKCGR GHWAR+CP
Sbjct: 95 YGGGGGGGGTYSSGARGGYRGGGDAVPSANDDCFKCGRAGHWARECP 141
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG-- 64
H + K+++++ SGR RGFGF+++ D++AM+DAI+EMHG + R I+V+KAQP G
Sbjct: 32 HLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEMHGMDLDGRSITVDKAQPNQGSGR 91
Query: 65 ----EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGG 117
+ R YG R +CFKCG+PGH+AR+CPS+ G RGG
Sbjct: 92 DRDGDRDRDRGRDRYNDRDRNRDYGGGRGSNGGECFKCGKPGHFARECPSSEGARGG 148
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ K+++++++G RGFGF+ + D R+M++AI +HG+E R I+VN+A+PK
Sbjct: 35 EAKVIVDKETGHSRGFGFVNFGDERSMEEAIERLHGKELDGRPITVNRAKPKGRD--GGG 92
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF 128
GG GGRG G GG DCFKCG+PGHWAR+CPS+ GG GAGG +S R R+
Sbjct: 93 DRGYGGGGGGGRGGGGGGGGGGGGDCFKCGQPGHWARECPSS-GGDRGAGGRYSGRDRY 150
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
H + K++L++ SGR RGFGFIT+ +++AMD+AI M+G + R I+V+KAQP GG
Sbjct: 32 HLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAG 91
Query: 67 SDH-GYRG--GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
D+ G RG GY R G DCFKCG+PGH+AR+CPS
Sbjct: 92 RDNDGDRGRDRGYD---RDRSRPSGGRGGGDCFKCGKPGHFARECPS 135
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
H + K+++++ SGR RGFGF+T+ +++AMD+AI+ M+G + R I+V+KAQP G
Sbjct: 32 HLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGR 91
Query: 67 SDHGYR---GGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
G R G + +G R DCFKCG+PGH+AR+CPS
Sbjct: 92 DHDGDRPRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPS 138
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 72/118 (61%), Gaps = 13/118 (11%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE--- 65
+ K++L++ SGR RGF F+T+ +++ M+ AI +M+G + R I+V+KAQP+ G
Sbjct: 34 TEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIEDMNGLDLDGRAITVDKAQPQGAGRDRN 93
Query: 66 -----VSDHGYRG--GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRG 116
D G R G S GGR G+ GG DCFKCG+PGH+AR+CP GGRG
Sbjct: 94 GDRDYDRDRGSRNDRGRDSGGGRAPRGS---GGGGDCFKCGKPGHFARECPDGDGGRG 148
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
Length = 163
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 35/132 (26%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ K++++R SGR RGFGF+T+AD+RAMD+AI +H +E RV++VNKA PK SD
Sbjct: 31 EAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDRLHNKELDGRVVTVNKALPK-----SDT 85
Query: 70 G-----------------------------YRGGGYSSGGRGSY-GADRPGGQDDCFKCG 99
G YR Y++ Y G G D CF+CG
Sbjct: 86 GGGMGFGDRDRDRDRDRDRDRDFDRGAGDRYRDREYAAPYSNGYAGRGDNNGNDSCFRCG 145
Query: 100 RPGHWARDCPSA 111
R GHWAR+CP +
Sbjct: 146 RQGHWARECPVS 157
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
Length = 166
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 69/134 (51%), Gaps = 37/134 (27%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ K++++R SGR RGFGF+T+AD+RAMD+AI +H +E RV++VNKA PK SD
Sbjct: 31 EAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDRLHNKELDGRVVTVNKALPK-----SDT 85
Query: 70 G-------------------------------YRGGGYSSGGRGSY-GADRPGGQDDCFK 97
G YR Y++ Y G G D CF+
Sbjct: 86 GGGMGFGDRDRDRDRDRDRDRDRDFDRGAGDRYRDREYAAPYSNGYAGRGDNNGSDSCFR 145
Query: 98 CGRPGHWARDCPSA 111
CGR GHWAR+CP +
Sbjct: 146 CGRQGHWARECPVS 159
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE- 65
H + K+++++ SGR RGFGF+T+ +++AM+DAI M+G + R I+V+KAQP+ G
Sbjct: 32 HLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEGMNGMDLDGRTITVDKAQPQQGSSR 91
Query: 66 -------VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
R G+ YG R +CFKCG+PGH+AR+CPS
Sbjct: 92 DLDGDRSRDRDRDRDRGHDRDRNRDYGGGRGSNSGECFKCGKPGHFARECPS 143
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG-- 64
H + K+++++ SGR RGFGF+++ D++AM+DAI+EMHG + R I+V+KAQP G
Sbjct: 32 HLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEMHGMDLDGRSITVDKAQPNQGSGR 91
Query: 65 ----EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSA 111
+ R YG R +CFKCG+PGH+AR+CPS+
Sbjct: 92 DRDGDRDRDRGRDRYNDRDRNRDYGGGRGSNGGECFKCGKPGHFARECPSS 142
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 99/195 (50%), Gaps = 30/195 (15%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG-- 64
H + K+++++ SGR RGFGF+T+ +++AM++AI EM+G + R I+V+KAQP G
Sbjct: 32 HLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEEMNGMDLDGRTITVDKAQPHQGSGR 91
Query: 65 -EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS 123
D G R G GG +CFKCG+PGH+AR+CPS GA GS
Sbjct: 92 EHDGDRNRDRGRDRDQNRDHGGRRPSGGGGECFKCGKPGHFARECPSE-----GAKGS-- 144
Query: 124 SRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRY--DSKDSKYGSRDRYVSDRYPP 181
R+GG DDRY GG G RY D ++G R++ R P
Sbjct: 145 ---RYGGR---------------DDRYSGGGGGGGGRYGPDRNGDRFGGRNKDAGSRGGP 186
Query: 182 AGDRLAGDRYGGSDR 196
DR DR G +R
Sbjct: 187 GTDRYNRDRSGPYER 201
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK------- 61
+ K+++++ SGR RGFGF+T+ D++AMD+AI M+G + R I+V+KAQP+
Sbjct: 34 TEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGMDLDGRTITVDKAQPQGSSRDRD 93
Query: 62 -MGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
R + YG R +CFKCG+PGH+AR+CPS GG G
Sbjct: 94 DGDRYRERGRDRDDRGNRDRSRGYGGSRGSNGGECFKCGKPGHFARECPSEGERGGGRYG 153
Query: 121 SFSSRSRFGGVGV--RGDYLGGGRDRYIDDRYDGGRYGD--RDRY 161
SRS GG G D GGR DGG +GD DRY
Sbjct: 154 GRESRSSGGGYGPDRNADRSSGGR-----SSRDGGSHGDSGSDRY 193
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK--MGGEVSDH 69
K+++++ SGR RGFGF+T+ D+ AM++AI M+G + R I+V+KAQP+ +
Sbjct: 259 KVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMNGIDLDGRTITVDKAQPQGSRDDDDRHR 318
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGG 117
YG R +CFKCG+PGH+AR+CPS G RGG
Sbjct: 319 ERGRDSRDRNRSRDYGGSRGSNGGECFKCGKPGHFARECPSE-GERGG 365
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD- 68
+ K+++++ SGR RGFGF+T+ D++AMD+AI M+G + R I+V++AQP+ G D
Sbjct: 35 EAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGMDLDGRTITVDRAQPQQGSTGGDG 94
Query: 69 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSR 125
YR G G R +CFKCG+PGH+AR+CPS G RGG G SR
Sbjct: 95 DRYRDCGRDRDRDHGGGGGRGSNGGECFKCGKPGHFARECPSE-GSRGGKYGGRESR 150
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK------- 61
+ K+++++ SGR RGFGF+T+ D++AMD+AI M+G + R I+V+K QP+
Sbjct: 34 TEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGMDLDGRTITVDKTQPQGSSRDRD 93
Query: 62 -MGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
R YG R +CFKCG+PGH+AR+CPS GG G
Sbjct: 94 DGDRYRERGRDRDDRGDRDRSRGYGGSRGSNGGECFKCGKPGHFARECPSEGERGGGRYG 153
Query: 121 SFSSRSRFGGVGV--RGDYLGGGRDRYIDDRYDGGRYGD--RDRY 161
SRS GG G D GGR DGG +GD DRY
Sbjct: 154 GRESRSSGGGYGPDRNADRSSGGR-----SSRDGGSHGDSGSDRY 193
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK--MGG 64
H + K++++RD+GR RGFGF+T+ D+++M+DAI MHG R I+V++A+PK
Sbjct: 32 HLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDSMHGMSLDGRSITVDRARPKSDGED 91
Query: 65 EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSS 124
GY G Y GG +CFKCG+ GH+AR+CP+ G RGG G + S
Sbjct: 92 RGDRGDRGDRGYGGGSGRGYSGGGGGGSSECFKCGQRGHFARECPNGDGYRGGGGDRYGS 151
Query: 125 RS-RFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 181
RS R+GG G R G R +G RYG R R S+ G DRY DR P
Sbjct: 152 RSDRYGGGGSRSSKYGSDR--------NGDRYGGRSR--DGGSRSGKDDRYNRDRSGP 199
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP---KMGGEV 66
+ K+++++++G RGFGF+ + D R+MD+AI +HG+E R I+VN+A+P GG+
Sbjct: 35 EAKVIVDKETGHSRGFGFVNFGDERSMDEAIERLHGKELDGRPITVNRAKPKGRDGGGDR 94
Query: 67 SDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
G GGG G G G GG DCFKCG+PGHWAR+CP+
Sbjct: 95 GGGGGGGGGGGGKGGGGGGGGGGGGGGDCFKCGQPGHWARECPT 138
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG---- 64
+ K++L++ SGR RGFGF+T+ +++AM+DAI M+G + R I+V+KAQP+ G
Sbjct: 34 TEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDLDGRNITVDKAQPQGPGRDRN 93
Query: 65 -------EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
E RG Y G G GG DCFKCG+PGH+AR+CPS
Sbjct: 94 GDRDYDRERGSRYERGRDYGGGRAPRGGGGGGGGGGDCFKCGKPGHFARECPS 146
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG--EV 66
+ K++ ++ SGR RGFGF+T+ +++AM+DAI M+G + R I+V+KAQP+ G
Sbjct: 34 TEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGMNGLDLDGRAITVDKAQPQGPGRDRN 93
Query: 67 SDHGY---RGGGYSSGGRGSYGADRP---GGQDDCFKCGRPGHWARDCP 109
D Y RG Y G G P GG DC+KCG+PGH+AR+CP
Sbjct: 94 GDRDYDRDRGSRYDRGRDFGGGGRAPRGSGGGGDCYKCGKPGHFARECP 142
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP-----KMGG 64
+ K++ +R++ R RGFGF+T+ D +M++AIR+MH +E R I+V+KA+P GG
Sbjct: 33 EAKVVFDRETNRSRGFGFVTFEDEESMENAIRKMHNQELEGRSITVSKAEPPRSGGGGGG 92
Query: 65 EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGA 118
RG Y G G +CFKCG GHWARDCP G R G+
Sbjct: 93 GGGGGRDRGDRYDRDRERGGGGGGGGASGNCFKCGNKGHWARDCPENGGDRYGS 146
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 10/112 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE--V 66
+ K++L++ SGR RGFGF+T+ +++AM+DAI M+G + R I+V+KAQP+ G
Sbjct: 34 TEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDLDGRNITVDKAQPQGPGRDRN 93
Query: 67 SDHGY---RGGGYSSG-----GRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
D Y RG Y G GR G GG DCFKCG+PGH+AR+CPS
Sbjct: 94 GDRDYDRERGSRYERGRDYGGGRAPRGGGGGGGGGDCFKCGKPGHFARECPS 145
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG----- 64
D K++L++ SGR RGFGF+T+ D+RAM+DAI M+G + R I+V+KAQP+ G
Sbjct: 35 DAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEAMNGMDLDGRAITVDKAQPQQGSGRDFD 94
Query: 65 ---EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
R G G G DC+ CG+PGH+AR+CPS
Sbjct: 95 NDRPRDRDRDRDRGRDRDRGGRDYGGGRGSGGDCYNCGKPGHFARECPS 143
>gi|357115606|ref|XP_003559579.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Brachypodium
distachyon]
Length = 160
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 15/115 (13%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM-GGEVSDH 69
++++ ER +GR RGFGF+ ++D RA DAI MH +E I+V A PK+ +
Sbjct: 36 VQVITERHTGRSRGFGFVIFSDPRAAIDAIMWMHNQELDGHTITVFWANPKVDNADGGRD 95
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSS 124
GY G G ++G G CF CGRPGHWA DCP A G G FSS
Sbjct: 96 GYCGSGRAAGFGGGC----------CFACGRPGHWAPDCPDA----GRCSGRFSS 136
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+ K+++++ SGR RGFGF+T+ D++AMD+AI M+G + R I+V++AQP+ G D
Sbjct: 35 EAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGIDLDGRTITVDRAQPQQGSTRDDG 94
Query: 70 GYRGGGYSSGGRG---SYGADRPGGQDDCFKCGRPGHWARDCP 109
R G R +CFKCG+PGH+AR+CP
Sbjct: 95 DRYRERGRDRDRNRDYGGGGGRGSNGGECFKCGKPGHFARECP 137
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP------KMG 63
+ K++ +R++ R RGFGF+T+ D +M++AIR+MH +E R I+V+KA+P G
Sbjct: 33 EAKVVFDRETNRSRGFGFVTFEDEESMENAIRKMHNQELEGRSITVSKAEPPRSGGGGGG 92
Query: 64 GEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCP 109
G RG Y G G +CFKCG GHWARDCP
Sbjct: 93 GGGGGGRDRGDRYDRDRERGGGGGGGGASGNCFKCGNKGHWARDCP 138
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+ K+++++ SGR RGFGF+TY +++ M+DAI M+G + R I+V++AQP+ G D
Sbjct: 34 TEAKVVVDKFSGRSRGFGFVTYDEKKVMEDAIDAMNGIDLDGRTITVDRAQPQQG-SARD 92
Query: 69 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCP 109
G R Y R CF CG+PGH+AR+CP
Sbjct: 93 DGDRYRERGRDRDRDYRGGRGSNDGGCFNCGKPGHFARECP 133
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVS- 67
+ K+++++ SGR RGF F+T+ +++AM++AI +M+G + R I+V+KAQP+ G
Sbjct: 34 TEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITVDKAQPQGVGRDRN 93
Query: 68 -------DHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCP 109
D G RG G G GG DCFKCG+PGH+AR+CP
Sbjct: 94 GDRDFDRDRGSRGDRGRDYGGGRAPRGGSGGGGDCFKCGKPGHFARECP 142
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG----- 64
D K++L++ SGR RGFGF+T+ ++RAM+DAI M+G + R I+V+KAQP G
Sbjct: 34 DAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEAMNGVDLDGRDITVDKAQPDKGSGRDFD 93
Query: 65 -----EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
+ R G R G GG DCF CG+PGH+AR+CPS
Sbjct: 94 SDRPRDRDRDRGRDRDRDRGSRDYGGGRGSGGGGDCFNCGKPGHFARECPS 144
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVS- 67
+ K+++++ SGR RGF F+T+ +++AM++AI +M+G + R I+V+KAQP+ G
Sbjct: 70 TEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITVDKAQPQGVGRDRN 129
Query: 68 -------DHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCP 109
D G RG G G GG DCFKCG+PGH+AR+CP
Sbjct: 130 GDRDFDRDRGSRGDRGRDYGGGRAPRGGSGGGGDCFKCGKPGHFARECP 178
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 48/183 (26%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG---- 64
+ K++L++ SGR RGFGF+T+ D++AM++A+ M+G + R I+V +AQP+ G
Sbjct: 34 TETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEAMNGIDLDGRNITVERAQPQGSGRNRD 93
Query: 65 -EVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS 123
+ G G GG DC+KCG+PGH+AR+CPS G
Sbjct: 94 GDRDYRGGGDRYGGGRDFGGGRGGGRGGGGDCYKCGKPGHFARECPSGDG---------- 143
Query: 124 SRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDR-DRYDSKDSKYGSRDRYVSDRYPPA 182
G RYG R DRY S+D +Y SRD DRY
Sbjct: 144 ----------------------------GDRYGSRDDRYSSRDDRYSSRD----DRYSSR 171
Query: 183 GDR 185
DR
Sbjct: 172 DDR 174
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK------M 62
+ K++L++ SGR RGFGF+T+ D++AM++A+ M+G + R I+V +AQP+
Sbjct: 34 TETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEAMNGIDLDGRNITVERAQPQGSGRDRD 93
Query: 63 GGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGG 114
G G G G G GG DC+KCG+PGH+AR+CPS GG
Sbjct: 94 GDYRGGGGDYGRDRGRDFGGGRGGGGRGGGGDCYKCGKPGHFARECPSGDGG 145
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 15/114 (13%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK---------- 61
K++L+RD+ R RGFGF+T+ D +M DAI MHG++ R I+V+KAQPK
Sbjct: 32 KVVLDRDTERSRGFGFVTFGDENSMQDAIDGMHGKDLDGRSITVSKAQPKSGGGGGGGGG 91
Query: 62 -----MGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
D G G SGG G G GG CFKCG GHWARDC S
Sbjct: 92 RDRDGGRDGGRDGGGYGRRSGSGGGGGGGGGGGGGNGGCFKCGESGHWARDCTS 145
>gi|327493225|gb|AEA86319.1| glycine-rich RNA-binding protein [Solanum nigrum]
Length = 165
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
Query: 19 SGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG------------EV 66
SGR RGFGF+T+ ++RAM+DAI M+G + R I+V+KAQP+ G +
Sbjct: 4 SGRSRGFGFVTFDEKRAMEDAIEAMNGMDLDGRAITVDKAQPQQGSGRDFDSDRPRDRDR 63
Query: 67 SDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
RG S G G R G DC+ CG+PGH+AR+CPS
Sbjct: 64 DRGRDRGRDRGSRDYGGGGGGRGSGGGDCYNCGKPGHFARECPS 107
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R+SGR RGFGF+T+ D +AM DAI EM+G+E RVI+VN+AQ +
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSR 85
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R+SGR RGFGF+T+ D +AM DAI EM+G+E RVI+VN+AQ
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R+SGR RGFGF+T+ D +AM DAI EM+G+E RVI+VN+AQ
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
>gi|407035882|gb|EKE37908.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 300
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+++ +++G+ RGFG++ + D A + + E G E R + ++ A K GG+ ++G
Sbjct: 168 RVITNKETGKSRGFGYLDFVDLEAANKFVEEHQGEEVDGRPLFLDLADGKKGGDKDNNGG 227
Query: 72 RGGGYSSG---GRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
+ G + S G+ + GG + CF CG+PGH +R+CP
Sbjct: 228 KFGAFGSSNKTGKQHTYKGKQGGDNVCFNCGKPGHMSRECPE 269
>gi|67484322|ref|XP_657381.1| RNA-binding protein [Entamoeba histolytica HM-1:IMSS]
gi|56474635|gb|EAL51997.1| RNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706848|gb|EMD46607.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 301
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+++ +++G+ RGFG++ + D A + + E G E R + ++ A K GG+ ++G
Sbjct: 169 RVITNKETGKSRGFGYLDFVDLEAANKFVEEHQGEEVDGRPLFLDLADGKKGGDKDNNGG 228
Query: 72 RGGGYSSG---GRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
+ G + S G+ + GG + CF CG+PGH +R+CP
Sbjct: 229 KFGAFGSSNKTGKQHTYKGKQGGDNVCFNCGKPGHMSRECPE 270
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++ +R++GR RGFGFIT+AD AM++AI+EM+G+E R I+VN+AQ +
Sbjct: 32 KVISDRETGRSRGFGFITFADENAMNEAIKEMNGKELDGRNITVNQAQSR 81
>gi|167375953|ref|XP_001733793.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904968|gb|EDR30090.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 308
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+++ +++G+ RGFG++ + D A ++E G E R + ++ A K GG+ + G
Sbjct: 176 RVITNKETGKSRGFGYLDFVDLEAAKKFVQEHQGEEVDGRPLFLDLADGKKGGDKDNDGG 235
Query: 72 RGGGY-SSGGRGSYGAD--RPGGQDDCFKCGRPGHWARDCPS 110
+ G + SS RG + GG + CF CG+PGH +R+CP
Sbjct: 236 KFGAFGSSNKRGKQHTFKGKQGGDNVCFNCGKPGHMSRECPE 277
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI EM+G+E R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRTITVNEAQ 83
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ D ++M DAI EM+G+E R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQS 84
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
Length = 135
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++L+RD+ R RGFGF+T+ D +M DAI MHG++ R I+V+KAQPK
Sbjct: 38 KVVLDRDTERSRGFGFVTFGDENSMQDAIDGMHGKDLDGRSITVSKAQPK 87
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+A+ ++M DAI EM+G+E R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFANEQSMRDAIDEMNGKELDGRSITVNEAQ 83
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D ++M DAI EM+G+E R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRSITVNEAQ 84
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
K++ +R++GR RGFGF+T+AD +M+ AI+EM+G+E R I+VN+AQ
Sbjct: 37 KVISDRETGRSRGFGFVTFADENSMNAAIKEMNGQELDGRNITVNQAQ 84
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++D +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIVSDRETGRSRGFGFVTFSDEQAMMDAIEAMNGKELDGRNITVNQAQSR 87
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T+A+ ++M DAI EM+G++ R I+VN+AQ
Sbjct: 35 TDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGRNITVNEAQS 86
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+++ +H ++ K++++R++GR RGFGF+T+A +AM DAI M+G+ R I+VN+
Sbjct: 24 LEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEGMNGQNLDGRSITVNE 83
Query: 58 AQP 60
AQ
Sbjct: 84 AQS 86
>gi|406507553|gb|AFS34620.1| lark, partial [Clunio marinus]
Length = 285
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 40/174 (22%)
Query: 14 MLERDSGRPRGFGFI--TYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+LE D R +GF+ AD ++DAIRE++G + + V +VS
Sbjct: 112 VLECDVVXCRNYGFVHLEVADNVNVNDAIRELNGMVIDGQALKV---------QVSTSRV 162
Query: 72 RGGGYSSGGRGSYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
R RPG D C++CGR GHW+++CP R G G+F R F
Sbjct: 163 R--------------QRPGMGDPESCYRCGRTGHWSKECPRIWNERAGV-GAFRERGPFI 207
Query: 130 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAG 183
+L RDR ID D Y RD Y +RD + RYPP G
Sbjct: 208 PPPPPPAFL---RDRIIDGFRDFDYYDRRDEY--------ARDMF-ERRYPPMG 249
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 39/47 (82%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
K++ +R++GR RGFGF+T+AD +M++AI++M+G+E R I+VN+A
Sbjct: 35 KVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKELDGRNITVNQA 81
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|156348369|ref|XP_001621824.1| hypothetical protein NEMVEDRAFT_v1g143489 [Nematostella
vectensis]
gi|156208104|gb|EDO29724.1| predicted protein [Nematostella vectensis]
Length = 89
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+K++ +R++GRPRGFGF+T+ + M+ AI E G++F R + VN+AQP+
Sbjct: 32 DVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPR 83
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+A+ ++M+DAI M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFANEKSMNDAIEAMNGQDLDGRNITVNQAQ 83
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 39/47 (82%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
K++ +R++GR RGFGF+T+AD +M++AI++M+G+E R I+VN+A
Sbjct: 32 KVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKELDGRNITVNQA 78
>gi|156367097|ref|XP_001627256.1| predicted protein [Nematostella vectensis]
gi|156214160|gb|EDO35156.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+K++ +R++GRPRGFGF+T+ + M+ AI E G++F R + VN+AQP+
Sbjct: 32 DVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPR 83
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ
Sbjct: 111 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 160
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ +
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQ 85
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+++++ +AM DAI M+G+E R I VN+AQ
Sbjct: 37 DAKIINDRETGRSRGFGFVSFSNEQAMQDAIEGMNGKELDGRSIVVNEAQS 87
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ D ++M DAI M+G+E R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFKDEKSMKDAISGMNGQELDGRNITVNEAQA 85
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+ D + M DAI M+G+E R I+VN+AQ +
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRSITVNEAQAR 85
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+A+ ++M+D I M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFANEKSMNDVIEAMNGQDLDGRNITVNQAQ 83
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+ +M AI EM+G+E R I+VN+AQ +
Sbjct: 34 DAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRNITVNEAQSR 85
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+ +M AI EM+G+E R I+VN+AQ +
Sbjct: 34 DAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRSITVNEAQSR 85
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + D+ KI+ +R++GR RGFGF+T+ D ++M DAI M+G+E R I+VN+
Sbjct: 22 LEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNE 81
Query: 58 AQP 60
AQ
Sbjct: 82 AQS 84
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+A +M AI M+G+E R I+VN+AQ +
Sbjct: 32 DAKIIQDRETGRSRGFGFVTFATEESMQAAIEGMNGKELDGRSITVNQAQSR 83
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+AD ++M DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVNEAQS 86
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMRDAIEAMNGQDLDGRSITVNEAQS 86
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T+++ ++M+DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEAQ 85
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ I+ +R++GRPRGFGF+T+ + M+ AI E G++ R + VNKAQP+
Sbjct: 34 DVNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNKAQPR 85
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+ +M AI EM+G+E R ++VN+AQ +
Sbjct: 34 DAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRQVTVNEAQSR 85
>gi|2196542|gb|AAB61213.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 197
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 40/49 (81%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++I+ +R++GR RGFGF+T+++ +AM DAI+ M+G+E R I+VN+AQ
Sbjct: 73 VQIINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITVNEAQ 121
>gi|167752759|ref|ZP_02424886.1| hypothetical protein ALIPUT_01020 [Alistipes putredinis DSM 17216]
gi|167659828|gb|EDS03958.1| hypothetical protein ALIPUT_01020 [Alistipes putredinis DSM 17216]
Length = 102
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
I+ +R++GR RGFGF+ D A +AI ++G E +R I+VN+A+PK E SD
Sbjct: 31 NIITDRETGRSRGFGFVEMPDESAARNAINALNGFELDERAINVNEARPKT--ERSDR-- 86
Query: 72 RGGGYSSGGRGSYGADR 88
GGY S GSYG +R
Sbjct: 87 --GGYGSNQGGSYGRNR 101
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D K++ +R++GR RGFGF+T+ +AM +AI M+G++ R ISVN AQ +
Sbjct: 32 DAKVIPDRETGRSRGFGFVTFTTEQAMQNAINAMNGKDIDGRTISVNMAQAR 83
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMSGKELDGRNITVNEAQSR 87
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM +AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM +AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM +AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM +AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 166
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ +
Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM +AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 169
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+++ +H ++ KI+ +R++GR RGFGF+T+A +M DAI M+G+ R I+VN+
Sbjct: 24 LEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIEGMNGQNLDGRNITVNE 83
Query: 58 AQ 59
AQ
Sbjct: 84 AQ 85
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
Length = 117
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T++ +AM DAI M+G+E R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|402220870|gb|EJU00940.1| hypothetical protein DACRYDRAFT_108285 [Dacryopinax sp. DJM-731
SS1]
Length = 491
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 34/162 (20%)
Query: 1 MQQCL-THNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+Q C N + I L+ G+GF+ + + +A ++A+ + + F I V ++
Sbjct: 84 LQNCFGKLGNVVNIELKL------GYGFVEFDNVKAAEEAVAKYNEGYFMGSKIKVEQS- 136
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
HG GGR S ++ PG CFKCG+ GHWAR+CP+ GG G
Sbjct: 137 ---------HG--------GGRTSKYSNDPGA---CFKCGQHGHWARECPN--GGTSIPG 174
Query: 120 GSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRY 161
+ + R + R + G +D R D GR+ DR+RY
Sbjct: 175 RKYGAYGRQDSLLTR---MNGTKDYGAPPR-DAGRFDDRERY 212
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ D ++M +AI M+G E R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFKDEKSMKEAISGMNGSELDGRNITVNEAQA 85
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
D+ + +ER + RPRGFGF+T + R+A +DAI +M + R I VN+++P+ G
Sbjct: 46 TDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAKMDQSQLDGRTIRVNESRPRGEGP--- 102
Query: 69 HGYRGGGYSSGGRGSYGADRPGGQDDC 95
G R G G YGA P G++D
Sbjct: 103 -GARRSNEPGTGPGGYGAFNPQGREDV 128
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 16 ERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+RD+GRPRGF F+T + A + A +++G E R + VN+AQPK+
Sbjct: 162 DRDTGRPRGFAFVTMPAKEA-ETACNKVNGMELDGRTVRVNEAQPKV 207
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum
tuberosum]
Length = 178
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|122890334|emb|CAJ74077.1| RNA recognition motif 1 [Guillardia theta]
Length = 199
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 8 NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
N + K+M++R SGR RGFGF+T+++ + AI EM+GRE R I+V A+ K+
Sbjct: 113 NCEAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIEEMNGRELLGRQITVTHARQKI 167
>gi|428181461|gb|EKX50325.1| RNA recognition motif 1 [Guillardia theta CCMP2712]
Length = 199
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 8 NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
N + K+M++R SGR RGFGF+T+++ + AI EM+GRE R I+V A+ K+
Sbjct: 113 NCEAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIEEMNGRELLGRQITVTHARQKI 167
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D K++ +R++GR RGFGF+T+ D ++M DAI M+GR+ R I+VN+AQ
Sbjct: 36 DSKVVSDRETGRSRGFGFVTFMDEQSMRDAIEGMNGRDLDGRNITVNRAQA 86
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 17 KIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQS 65
>gi|302851664|ref|XP_002957355.1| hypothetical protein VOLCADRAFT_107658 [Volvox carteri f.
nagariensis]
gi|300257314|gb|EFJ41564.1| hypothetical protein VOLCADRAFT_107658 [Volvox carteri f.
nagariensis]
Length = 1123
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + I L++ + +PRGFGF+T+ DR +M DAIR++H ++ R ISV +A P+
Sbjct: 47 DTVVIQLDKMTQKPRGFGFVTFKDRESMLDAIRDLHNKDVDGRPISVKEAIPQ 99
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ D +AM DAI M G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMKGQDLDGRNITVNEAQS 84
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica
Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+A AM AI M+G++ R I+VN+AQ +
Sbjct: 34 DSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
>gi|156367093|ref|XP_001627254.1| predicted protein [Nematostella vectensis]
gi|156214158|gb|EDO35154.1| predicted protein [Nematostella vectensis]
Length = 139
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 37/49 (75%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D++++ +R++ RPRGF F+T+ ++ M+DAI E+ G+EF R + VN+A
Sbjct: 32 DVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQA 80
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T+ D +AM DAI M+G+ R I+VN+AQ +
Sbjct: 38 KIINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQSR 87
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+ +R++GR RGFGF+T+A AM AI M+G++ R I+VN+AQ +
Sbjct: 34 DSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K++ +R++GR RGFGF+T+ D ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KVINDRETGRSRGFGFVTFGDEKSMKDAIVGMNGQTLDGRNITVNEAQS 86
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+A ++M DAI M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFASEQSMRDAIEGMNGKDLDGRNITVNEAQS 84
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ
Sbjct: 36 KIINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQS 84
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ + +AM DAI M+G++ R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ + +AM DAI M+G++ R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQS 85
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T++ +AM DAI M+G++ R I+VN+AQ
Sbjct: 37 KIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQS 85
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ D ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMRDAIEGMNGQTLDGRNITVNEAQS 86
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ D ++M DAI M+G+ R ++VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNVTVNEAQS 86
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ + ++M DAI+ M+ +E R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNITVNEAQ 84
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++ +R++GR RGFGF+T+A ++M DAI M+G++ R I+VN+AQ +
Sbjct: 38 KVINDRETGRSRGFGFVTFASEQSMKDAIAGMNGQDLDGRNITVNEAQTR 87
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+A AM AI M+G++ R I+VN+AQ
Sbjct: 34 DSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+A AM AI M+G++ R I+VN+AQ
Sbjct: 34 DSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ KI+ +R++GR RGFGF+T+A ++M DAI M+G+ R I+VN+AQ
Sbjct: 36 ETKIINDRETGRSRGFGFVTFASEQSMKDAIGAMNGQNLDGRNITVNEAQ 85
>gi|59802584|gb|AAX07527.1| unknown [Prosthecobacter dejongeii]
Length = 111
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ + ++ +GRPRGF F+T AM++AI ++G++FG R +++N+A+PK
Sbjct: 32 TDMHLPMDHATGRPRGFAFVTMDSAMAMNEAITALNGKDFGGRSLTINEARPK 84
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ KI+ +R++GR RGFGF+T+A ++M DAI M+G+ R I+VN+AQ
Sbjct: 72 ETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEAQ 121
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T+ D ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR GFGFIT++ ++M DAI M+G+E R I+VN+AQ
Sbjct: 36 DSKIINDRETGRSLGFGFITFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 43 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 91
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 41 KIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K++ +R++GR RGFGF+T+A +AM DAI M+G+ R I+VN+AQ
Sbjct: 38 KVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|363543383|ref|NP_001241701.1| glycine-rich RNA-binding protein [Zea mays]
gi|343227643|gb|AEM17058.1| glycine-rich RNA-binding protein [Zea mays]
Length = 160
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R++GR RGFGF+T++ +M DAI M+G+E I+VN+AQ +
Sbjct: 41 QVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGHNITVNQAQSR 90
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 32 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 80
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 40 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 88
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T+++ +AM DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T++ ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 42 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 90
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 41 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 41 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE 65
KI+ +R++GR RGFGF+T+ D +AM DAI M+ ++ R I+VN+AQ + G E
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNRQDLDGRNITVNEAQSRGGVE 89
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|156367085|ref|XP_001627250.1| predicted protein [Nematostella vectensis]
gi|156214154|gb|EDO35150.1| predicted protein [Nematostella vectensis]
Length = 259
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D+K++ +R++GRPRGFGF+T+ MD AI + G + R + VNKAQP
Sbjct: 139 DVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQP 189
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 48 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 48 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D KI+ +R++GR RGFGF+T+ + +AM DAI M+G++ R I+VN+AQ
Sbjct: 34 DSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQS 84
>gi|51893978|ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
gi|51857667|dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
Length = 86
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+I+ +R++GR RGFGF+ AD A AI E+H E+G R ++VN+AQ + GG
Sbjct: 33 RIITDRETGRSRGFGFVDMADEEAARRAIAELHNYEYGGRPLTVNEAQARQGG 85
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T++ ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSXEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ + +AM DAI M+G++ R I+VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQ 84
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T++ +M +AI M+G++ R I+VN+AQ
Sbjct: 33 DCKIINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVNEAQ 82
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + ++M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|413918562|gb|AFW58494.1| FUSICOCCIN receptor protein s [Zea mays]
Length = 900
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
++L++ SGR RG GF+ + +++AM+DAI +G I+V+KA+P G +G R
Sbjct: 737 VVLDKFSGRSRGLGFVNFNEKQAMEDAIEATNGLCLDGSNITVDKARPH-GPSRDRNGDR 795
Query: 73 ------GGGYSSGGRGSYGADRPGGQDDCFKCGRP 101
G Y G G GG DCFKCG P
Sbjct: 796 YYDRELGSRYDHGRNYGGGCALRGGGGDCFKCGNP 830
>gi|281210217|gb|EFA84385.1| CCHC-type Zn finger-containing protein [Polysphondylium pallidum
PN500]
Length = 274
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 24/88 (27%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
+GF FI Y+ R A D+AI H F R I V K+
Sbjct: 35 KGFCFIEYSSRDAADEAINSSHRTNFLGRSIVVEKSH----------------------- 71
Query: 83 SYGADRPG-GQDDCFKCGRPGHWARDCP 109
S GA RP G+ CF C + GHWA++CP
Sbjct: 72 SNGAKRPVPGEGRCFHCHQEGHWAKECP 99
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T++D ++M DAI M+G+ R I+VN AQ
Sbjct: 39 KIISDRETGRSRGFGFVTFSDEQSMRDAIDAMNGKVLDGRNITVNPAQ 86
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GRPRGFGF+ ++D A AI EM G++ R I VN A
Sbjct: 64 DAKVIVDRETGRPRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPAN 113
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 45 KIILDRETQRSRGFGFVTFSXXDAMRSAIEGMNGKELDGRNITVNEAQS 93
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGRPRGFGF+ ++D ++AI+ M G+E R I V+ AQ +
Sbjct: 66 DARVIVDRDSGRPRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117
>gi|384246748|gb|EIE20237.1| hypothetical protein COCSUDRAFT_57959 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D ++ML+R + R RGFGF+T+ + M++ I ++H E R ISV +A P+
Sbjct: 49 DARVMLDRITNRSRGFGFVTFDTKEDMEECIAKLHATELDGRKISVTRAIPQ 100
>gi|440804043|gb|ELR24926.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 263
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
GFGF+ Y DRR +DA+R++ G MG ++ +G ++G R
Sbjct: 16 GFGFVEYEDRRDAEDAVRDLDGAHL-------------MGKRIAVEWAKGERRATGTRS- 61
Query: 84 YGADRPGGQDDCFKCGRPGHWARDC 108
D CF+CG GHWARDC
Sbjct: 62 ---------DACFRCGEEGHWARDC 77
>gi|77416975|gb|ABA81883.1| putative glycine-rich RNA binding protein-like [Solanum
tuberosum]
Length = 176
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 5 LTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+ + +I+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ
Sbjct: 25 MVFISIFQIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRKITVNEAQS 80
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+AQ
Sbjct: 95 KIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 143
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T+ D ++M DAI M+G+ R I+VN AQ
Sbjct: 38 KIISDRETGRSRGFGFVTFNDEQSMRDAIDAMNGKMLDGRSITVNPAQ 85
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
KI+ +R++GR RGFGF+T+A +M DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFASEDSMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
D IM +R +GRPRGFGFITYAD +D I+E H D+ + + + PK + +D
Sbjct: 45 TDSVIMKDRHTGRPRGFGFITYADASVVDQVIQENH--IINDKQVEIKRTIPKGASQTND 102
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D KI+ +R++GR RGFGF+T+ + ++M DAI+ M+ +E R +VN+AQ
Sbjct: 35 DSKIINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNTTVNEAQ 84
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ +AM DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ +AM DAI M+G+ R I+VN+AQ
Sbjct: 38 KIINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|66809897|ref|XP_638672.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467278|gb|EAL65311.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 365
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
+GF FI Y D+ + DDAI H + F R I V E+S+
Sbjct: 35 KGFCFIEYFDKASADDAINSEHKQNFLGRNIIV---------ELSN-------------S 72
Query: 83 SYGADRPGGQD-DCFKCGRPGHWARDCPS 110
S G RP CF C GHWAR CP+
Sbjct: 73 SKGIKRPDSSSGKCFMCNEEGHWARSCPN 101
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D + ++AI+ M G+E R I VN AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIAQER 117
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D +++L+R++GR RGFGF+T+ A AI+ + GR+ RV+ VN A
Sbjct: 68 DTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYA 116
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
FGF+ + DRR +DA+ +GR I+V A+
Sbjct: 39 SFGFVEFEDRRDAEDALNRENGRNVRGVRIAVEWAK------------------------ 74
Query: 84 YGADRPGGQDDCFKCGRPGHWARDCPS 110
G +R D CF+C +PGHWA+DCP+
Sbjct: 75 -GQNRSADSDSCFRCNKPGHWAKDCPN 100
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVN-----KAQPKMGGEV 66
K+M+ERD+GR +GFGF+ DAI ++GR R ++VN +A+P GG
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDSEAQDAINGLNGRSVDGRALTVNVARPMEARPSFGGGA 92
Query: 67 SDHGYRGGGY 76
GYRGG Y
Sbjct: 93 DRGGYRGGRY 102
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+KI+L+RD+GR RGFGF+ + + + A++EM GRE R I V+ A K
Sbjct: 72 TDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQEMDGRELAGRQIRVDYATDK 124
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330826150|ref|YP_004389453.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317116592|gb|ADU99080.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329311522|gb|AEB85937.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 102
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVN-----KAQPKMGGEV 66
K+M+ERD+GR +GFGF+ A +AI +HG+ R ++VN +A+P GG
Sbjct: 33 KVMMERDTGRSKGFGFVEMASGAEAQEAINGLHGKSVDGRALTVNVARPMEARPSFGGGA 92
Query: 67 SDHGYRGGGY 76
GYRG Y
Sbjct: 93 DRGGYRGSRY 102
>gi|308497108|ref|XP_003110741.1| CRE-DRR-2 protein [Caenorhabditis remanei]
gi|308242621|gb|EFO86573.1| CRE-DRR-2 protein [Caenorhabditis remanei]
Length = 223
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 38/50 (76%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ ++ +R++G +GFG++T+ + ++DAI++++G EF RV+ VN+AQ
Sbjct: 40 EIHLVHDRETGTCKGFGYVTFQSEQQLNDAIKKLNGVEFAKRVLKVNRAQ 89
>gi|45533923|gb|AAS67333.1| glycine-rich RNA-binding protein RGP-1c [Nicotiana sylvestris]
Length = 136
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 16 ERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ
Sbjct: 4 DRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRNITVNEAQS 48
>gi|389751418|gb|EIM92491.1| hypothetical protein STEHIDRAFT_127304 [Stereum hirsutum FP-91666
SS1]
Length = 454
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 36/117 (30%)
Query: 1 MQQCL-----THNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISV 55
+Q C N +LK+ G+GF+ + R A ++++ + H F
Sbjct: 100 LQSCFGKIGRITNIELKV----------GYGFVEFESREAAEESVAKYHEGFF------- 142
Query: 56 NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV 112
MG ++ RGGG + G GA CFKCG+ GHWAR+CP+ V
Sbjct: 143 ------MGNKIRVELSRGGGRYAKFSGDPGA--------CFKCGQMGHWARECPNHV 185
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ + +RD+GRPRGF F+ + AMD AI+ ++G E+ R ++VN+A+P+
Sbjct: 30 TEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIKGLNGLEWMGRALTVNEARPR 82
>gi|121583453|ref|YP_973884.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596707|gb|ABM40142.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 150
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ A+ AI M+G+ G R I+VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMANDAQAQAAINGMNGQPLGGRSITVNEARP 81
>gi|121583148|ref|YP_973589.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596410|gb|ABM39847.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 148
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ A+ AI M+G+ G R I+VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMANDAQAQAAINGMNGQPLGGRSITVNEARP 81
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++ +RDSGR +GFGF+TY + D AI+E+ E R I VN+A+P+
Sbjct: 33 KVVTDRDSGRSKGFGFVTYVNDEDADTAIKELDNSELDGRNIHVNEARPR 82
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G SDH
Sbjct: 175 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-- 230
Query: 72 RGGGYSSGGRGSYG 85
SS GR S+G
Sbjct: 231 -----SSNGRSSHG 239
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
Length = 104
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 38/50 (76%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++++R++GR +GFGF+ + D ++ DAI M+G++ R ++VN+A+P+
Sbjct: 33 QVVMDRETGRSKGFGFVEFGDSQSASDAINAMNGKDVNGRALTVNEARPR 82
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF F+ + D R +DA+R + GR R + V E+S+ G R G Y G
Sbjct: 50 PPGFAFVEFEDPRDAEDAVRGLDGRSICGRRVRV---------ELSNAGSRKGAYRGGPP 100
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGR 115
P +D C++CG GH+ARDC GGR
Sbjct: 101 RRGRPFHP--EDKCYECGDRGHYARDCRRFKGGR 132
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
+ F+ Y D R +DA++ +GRE + + V A RG + R S
Sbjct: 43 AYAFVDYEDHRDAEDAVKYENGREIRGQSVVVEWA-------------RGPSF----RPS 85
Query: 84 YGADRPGGQ--DDCFKCGRPGHWARDCPSA 111
G DR G Q D+C++C R GHWARDCP
Sbjct: 86 AGKDRMGYQSFDECYRCRRTGHWARDCPEL 115
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 36/115 (31%)
Query: 1 MQQCL-----THNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISV 55
+Q C N +LK+ G+GF+ + +R A ++++ + H F + I V
Sbjct: 101 LQNCFGKIGKIVNIELKV----------GYGFVEFENREAAEESVEKYHEGYFMGQKIRV 150
Query: 56 NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
E+S HG GGR + A PG CF+CG+ GHWAR+CP+
Sbjct: 151 ---------ELS-HG--------GGRTAKYAGEPGA---CFRCGQLGHWARECPT 184
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IM +R++GR RGFGFIT+ +A+++ I + E G + + + KA+PK
Sbjct: 159 QIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKAEPK 208
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGF+TYAD +D I++ H
Sbjct: 69 TDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQDKH 104
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + + K+M+ERD+GR +GFGF+ AI M+G++FG R + VN+
Sbjct: 25 LQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAISAMNGQQFGGRGLVVNE 84
Query: 58 AQP 60
A+P
Sbjct: 85 ARP 87
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ +++L+R++GR RGFGF+T+ A AI+ + GR+ RV+ VN A
Sbjct: 68 ETRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYA 116
>gi|347819855|ref|ZP_08873289.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 128
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AIR +HG+ FG R + VN+
Sbjct: 37 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIRGVHGQSFGGRDLVVNE 96
Query: 58 AQP 60
A+P
Sbjct: 97 ARP 99
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
D IM +R +GRPRGFGFITY+D +D I E H D+ + + + PK E D
Sbjct: 43 DSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAETH--IINDKQVEIKRTIPKGSAESKD 99
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +I+ + S R RGFGFI + + +D+ + E + + + + KA+PK + S+
Sbjct: 131 DCEIIRDHVSKRSRGFGFIVFDNELVVDNVLSEGNMIDMLGTQVEIKKAEPK---KPSNP 187
Query: 70 GYRGGGYSSGGRG 82
G GY S RG
Sbjct: 188 ASSGHGYGSESRG 200
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + AM AI M+G R I+VN+AQ
Sbjct: 38 KIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQ 86
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + AM AI M+G R I+VN+AQ
Sbjct: 38 KIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQ 86
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + AM AI M+G R I+VN+AQ
Sbjct: 38 KIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQ 86
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + AM AI M+G R I+VN+AQ
Sbjct: 38 KIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQ 86
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+ +R++GR RGFGF+T+ + AM AI M+G R I+VN+AQ
Sbjct: 38 KIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQ 86
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IML+ +GR RGFGFIT+ +++ I E R+ G + + + KA+PK G SDH
Sbjct: 233 QIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-- 288
Query: 72 RGGGYSSGGRGSYG 85
SS GR ++G
Sbjct: 289 -----SSNGRSNHG 297
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 26/88 (29%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R F FI + +RR DDA++ ++G + +G +++ +GGG +
Sbjct: 38 RCFAFIEFKERRDADDALKALNGAKL-------------LGSKITVEWSKGGGKA----- 79
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDCPS 110
P + CF C + GHWA+DCP+
Sbjct: 80 ------PDNK--CFTCQQSGHWAKDCPN 99
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ ++R +GR +GFG+++++ A + AI EM+G+E R ++VN A PK
Sbjct: 422 VQMDRQTGRSKGFGYVSFSTPEAAEKAIAEMNGKEIDGRAVNVNAATPK 470
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria
sulphuraria]
Length = 148
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++R++GR RGFGFI+YA+ ++D+ I + G++ R I VNKA +
Sbjct: 33 DARVVIDRETGRSRGFGFISYAESSSVDECIAALDGQDLQGRTIRVNKAMTR 84
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
D+ IM + D+G+ RGFGF+T A++ +R MH E + + + KAQPKM
Sbjct: 127 DVHIMNDTDTGKHRGFGFVTLDSEEAVEKLVR-MHHLELKGKSMEIKKAQPKM 178
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IML+ +GR RGFGFIT+ +++ I E R+ G + + + KA+PK G SDH
Sbjct: 174 QIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-- 229
Query: 72 RGGGYSSGGRGSYG 85
SS GR ++G
Sbjct: 230 -----SSNGRSNHG 238
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D+ I+ +R+SGRPRGF F++ M+ AI ++G EF R +++N+A+P
Sbjct: 26 TDVFILKDRESGRPRGFAFVSMETPEEMNAAIEALNGEEFMGRNLTINEARP 77
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ ++D A AI EM G++ R I VN+A
Sbjct: 64 DAKVIVDRETGRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNQAN 113
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF FI AD A AI + G E R + +NKA+P+
Sbjct: 29 NCSLPLERDTGRKRGFAFIEMADEAAESSAIEALQGAELMGRPLRINKAEPR 80
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IML+ +GR RGFGFIT+ +++ I E R+ G + + + KA+PK G SDH
Sbjct: 156 QIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-- 211
Query: 72 RGGGYSSGGRGSYG 85
SS GR ++G
Sbjct: 212 -----SSNGRSNHG 220
>gi|326319544|ref|YP_004237216.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376380|gb|ADX48649.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 124
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + N K+M+ERD+GR +GFGF+ AI+ HG+ FG R + VN+
Sbjct: 19 LQQTFSQYGNVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGAHGQNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|171451986|dbj|BAG15857.1| glycine-rich protein [Bruguiera gymnorhiza]
Length = 163
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 4 CLTH-----NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
C+T N I+ +R++GR RGFGF+T+ + ++M DAI M+G+ R I+VN+A
Sbjct: 28 CVTTVLFYVTNLQSIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEA 87
Query: 59 Q 59
Q
Sbjct: 88 Q 88
>gi|353238715|emb|CCA70653.1| hypothetical protein PIIN_04589 [Piriformospora indica DSM 11827]
Length = 410
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 25/113 (22%)
Query: 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+Q C +K + + G+GF+ + R+A ++A + +G F I V A
Sbjct: 64 LQDCFKEFGVIKSIELKT-----GYGFVAFDSRQAAEEAAKTYNGGSFLGNTIRVAPA-- 116
Query: 61 KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVG 113
HG + GS PG CFKCG GHWAR+CP G
Sbjct: 117 --------HG-------TNKTGSKSLVEPGA---CFKCGNHGHWARECPHHQG 151
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ K++ +RD+GR RGFGF+T+A+ AI EM G E R I VN+AQ +
Sbjct: 30 TEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEEMDGVELDGRNIRVNEAQER 82
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 38/132 (28%)
Query: 1 MQQCL-----THNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISV 55
++ C N +LK+ G+GF+ + +R A ++++ + H F
Sbjct: 113 LESCFGKIGNIVNIELKV----------GYGFVEFDNREAAEESVAKYHEGYF------- 155
Query: 56 NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS--AVG 113
MG ++ GGG ++ G GA CFKCG+ GHWAR+CP+ A G
Sbjct: 156 ------MGNKIRVEISHGGGRTAKYSGDPGA--------CFKCGQMGHWARECPNHLAAG 201
Query: 114 GRGGAGGSFSSR 125
R G+ R
Sbjct: 202 RRPGSDAPLIDR 213
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D + ++AI+ M G+E R I V+ AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 21/102 (20%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
I + G FGF+ Y D+R ++A++ EF N A KM E + G R
Sbjct: 27 IRCDVKHGASVSFGFVEYEDKRDAEEAVKAGQETEF-----EFNGA--KMYVEWAKAGGR 79
Query: 73 GGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGG 114
GG S D CFKCG GHWAR+CP++ GG
Sbjct: 80 RGGERS--------------DGCFKCGETGHWARECPNSGGG 107
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ M + I M+G+E R I+VN+AQ
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEERMRNRIEGMNGKELDGRNITVNEAQS 86
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D + ++AI+ M G+E R I V+ AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117
>gi|452824418|gb|EME31421.1| glycine-rich RNA binding protein isoform 2 [Galdieria
sulphuraria]
Length = 137
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++++R++GR RGFGFI+YA+ ++D+ I + G++ R I VNKA +
Sbjct: 24 KVVIDRETGRSRGFGFISYAESSSVDECIAALDGQDLQGRTIRVNKAMTR 73
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D + ++AI+ M G+E R I V AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQER 117
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D + ++AI+ M G+E R I V+ AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D + ++AI+ M G+E R I V+ AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G SDH
Sbjct: 174 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-- 229
Query: 72 RGGGYSSGGRGSYG 85
SS GR ++G
Sbjct: 230 -----SSNGRSNHG 238
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++++RDSGR RGFGF+ ++D ++AI+ M G+E R I V+ AQ +
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117
>gi|1094717|prf||2106321A stage-specific activator protein
Length = 404
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63
D+ IM + D+G+ RGFGF+T A++ +R MH E + + + KAQPKM
Sbjct: 127 DVHIMNDTDTGKHRGFGFVTLDSEEAVEKLVR-MHHLELKGKSMEIKKAQPKMN 179
>gi|395005502|ref|ZP_10389379.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394316555|gb|EJE53276.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 130
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ +HG+ FG R + VN+
Sbjct: 19 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGVHGQNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|241766570|ref|ZP_04764427.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363174|gb|EER58765.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 125
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ +HG+ FG R + VN+
Sbjct: 19 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGVHGQNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|121607152|ref|YP_994959.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
gi|121551792|gb|ABM55941.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
Length = 122
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ +HG+ FG R + VN+
Sbjct: 19 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAQAQAAIQGVHGQNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ ++D A AI EM G++ R I VN A
Sbjct: 64 DAKVIVDRETGRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPAN 113
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF F+ + D R +DA+R + GR R + V E+S+ G R G Y G
Sbjct: 50 PPGFAFVEFEDPRDAEDAVRGLDGRSICGRRVRV---------ELSNAGSRKGAYRGGPP 100
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
P +D C++CG GH+ARDC
Sbjct: 101 RRGRPFHP--EDKCYECGDRGHYARDC 125
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 24/89 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G+ +G+R + G
Sbjct: 36 KPPGFAFIDFDDRRDAEDAIRDLDGK----------------------NGWRVELSTKAG 73
Query: 81 RGSYGADRPGGQD-DCFKCGRPGHWARDC 108
G G DR GG D C++CG PGH+AR+C
Sbjct: 74 SGR-GRDRSGGSDMKCYECGEPGHFAREC 101
>gi|427796859|gb|JAA63881.1| Putative glycine rich protein, partial [Rhipicephalus pulchellus]
Length = 266
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 39/147 (26%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSS 78
+ + F+ AI +H EF I+V +K +PK G
Sbjct: 65 KNYAFVHMNSEEESKLAIDALHNSEFMGGKITVEASHSKVRPKPG--------------M 110
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS-----SRSRFGGVG- 132
GGRG C++CGR GHW+++CP R G+G +R+ GVG
Sbjct: 111 GGRG-----------QCYRCGRQGHWSKECPRNPNARFGSGVPMMPPGGGPLARYPGVGG 159
Query: 133 -VRGDYLGGGRDRYIDDRYDGGRYGDR 158
R Y GG DR++D GG YGDR
Sbjct: 160 PERLGYGSGGPDRFMD---RGGAYGDR 183
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D K++++RDSGR RGFGF+ ++D +A+ M G++ R I VN AQ +
Sbjct: 67 DAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQER 118
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 24/89 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G+ +G+R + G
Sbjct: 36 KPPGFAFIDFDDRRDAEDAIRDLDGK----------------------NGWRVELSTKAG 73
Query: 81 RGSYGADRPGGQD-DCFKCGRPGHWARDC 108
G G DR GG D C++CG PGH+AR+C
Sbjct: 74 SGR-GRDRSGGSDMKCYECGEPGHFAREC 101
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++M+ERD+GR +GFGF+ A AI+ M+G+ G R + VN+A+P
Sbjct: 33 RVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARP 81
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GFGFI + D R +DAIREM GR + V KA RG ++ R
Sbjct: 37 PPGFGFIVFDDPRDAEDAIREMDGRRVCGMRVRVEKA-------------RGPNSNNRNR 83
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDCPS 110
S + C+ CG+ GH +RDC S
Sbjct: 84 SS------AQNEKCYNCGKIGHLSRDCRS 106
>gi|393218783|gb|EJD04271.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 36/115 (31%)
Query: 1 MQQCL-----THNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISV 55
+Q C N +LK+ G+GF+ + R A ++++ + H F
Sbjct: 94 LQSCFGKIGEIVNIELKL----------GYGFVEFETREAAEESVAKYHEGFF------- 136
Query: 56 NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
MG ++ GGG ++ G GA CFKCG GHWAR+CP+
Sbjct: 137 ------MGNKIRVEMSHGGGRTAKYNGDPGA--------CFKCGMTGHWARECPN 177
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GFGFI + D R +DAIREM GR + V KA RG ++ R
Sbjct: 37 PPGFGFIVFDDPRDAEDAIREMDGRRVCGMRVRVEKA-------------RGPNSNNRNR 83
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDCPS 110
S + C+ CG+ GH +RDC S
Sbjct: 84 SS------AQNEKCYNCGKIGHLSRDCRS 106
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K+M++RDSGR +GFGF+ AIR++HG R + VN+A+P+
Sbjct: 33 KVMMDRDSGRSKGFGFVEMGSHEEAQAAIRKLHGASVDGRALVVNEARPR 82
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++M+ERD+GR +GFGF+ A AI+ M+G+ G R + VN+A+P
Sbjct: 33 RVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARP 81
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++M+ERD+GR +GFGF+ A AI+ M+G+ G R + VN+A+P
Sbjct: 33 RVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARP 81
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ KI+L+R+SGR RGFGFITY AI M G+ R I VN A +
Sbjct: 62 EAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 113
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ I+ +RD+GR RGF F+T+ + AI+EMH +F R ++V +AQ K
Sbjct: 34 VAIITDRDTGRSRGFAFVTFREEEGAATAIKEMHEEDFLGRSVTVREAQSK 84
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++M+ERD+GR +GFGF+ A AI+ M+G+ G R + VN+A+P
Sbjct: 33 RVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARP 81
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 26/86 (30%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
RG+GF+ Y DRR DA+R++ G +SV +G ++ +G
Sbjct: 54 RGYGFVEYEDRRDAQDALRDLDG-------VSV------LGTRIAIEWAKGA-------- 92
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDC 108
R D CF+CG GHWARDC
Sbjct: 93 -----RRTDTDTCFRCGEEGHWARDC 113
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ +AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQEAINGMNGQSLGGRSIVVNEARP 81
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ KI+L+R+SGR RGFGFITY AI M G+ R I VN A +
Sbjct: 59 EAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 110
>gi|427796855|gb|JAA63879.1| Putative glycine rich protein, partial [Rhipicephalus pulchellus]
Length = 249
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 39/147 (26%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSS 78
+ + F+ AI +H EF I+V +K +PK G
Sbjct: 65 KNYAFVHMNSEEESKLAIDALHNSEFMGGKITVEASHSKVRPKPG--------------M 110
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS-----SRSRFGGVG- 132
GGRG C++CGR GHW+++CP R G+G +R+ GVG
Sbjct: 111 GGRG-----------QCYRCGRQGHWSKECPRNPNARFGSGVPMMPPGGGPLARYPGVGG 159
Query: 133 -VRGDYLGGGRDRYIDDRYDGGRYGDR 158
R Y GG DR++D GG YGDR
Sbjct: 160 PERLGYGSGGPDRFMD---RGGAYGDR 183
>gi|325302660|tpg|DAA34468.1| TPA_exp: RNA-binding protein LARK [Amblyomma variegatum]
Length = 212
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 42/150 (28%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSS 78
+ + F+ + AI +H EF I+V +K +PK G
Sbjct: 34 KNYAFVHMSSEDESKMAIDALHNSEFMGGKITVEASHSKVRPKPG--------------M 79
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSF-------SSRSRFGGV 131
GGRG C++CGR GHW+++CP R GA +R+ GV
Sbjct: 80 GGRGQ-----------CYRCGRQGHWSKECPRNPNARFGAAVPMLPPGGGGGPLARYPGV 128
Query: 132 GVRGDYLG---GGRDRYIDDRYDGGRYGDR 158
G D LG GG DR++D GG YGDR
Sbjct: 129 GGGPDRLGYGSGGPDRFLD---RGGAYGDR 155
>gi|365091633|ref|ZP_09328988.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415944|gb|EHL23068.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 129
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ +HG FG R + VN+
Sbjct: 19 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGVHGTNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|351731831|ref|ZP_08949522.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 131
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ +HG FG R + VN+
Sbjct: 19 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGVHGTNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
D KI+++RD+GR RGFGFITYA AI + G++ R + V+ A + G
Sbjct: 59 DAKIIVDRDTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSG 113
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 109/284 (38%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPV-----KRGP 150
Query: 96 FKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD 151
R PS + G GG R +GG R + L RD Y+ R D
Sbjct: 151 PPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDNYSSRDYP-SSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 RD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 301
>gi|427777187|gb|JAA54045.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 219
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 39/147 (26%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSS 78
+ + F+ AI +H EF I+V +K +PK G
Sbjct: 35 KNYAFVHMNSEEESKLAIDALHNSEFMGGKITVEASHSKVRPKPG--------------M 80
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFS-----SRSRFGGVG- 132
GGRG C++CGR GHW+++CP R G+G +R+ GVG
Sbjct: 81 GGRG-----------QCYRCGRQGHWSKECPRNPNARFGSGVPMMPPGGGPLARYPGVGG 129
Query: 133 -VRGDYLGGGRDRYIDDRYDGGRYGDR 158
R Y GG DR++D GG YGDR
Sbjct: 130 PERLGYGSGGPDRFMD---RGGAYGDR 153
>gi|358059659|dbj|GAA94591.1| hypothetical protein E5Q_01243 [Mixia osmundae IAM 14324]
Length = 294
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 78/194 (40%), Gaps = 45/194 (23%)
Query: 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITY-ADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+Q C + I +E SG +GF+ + ++ A+D + G G ++ +
Sbjct: 40 LQDCFGQIGPV-ITVELKSG----YGFVEFGTEQHALDAVSKYNDGHFLGAQIKVEVSKR 94
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
P+ + + G CFKCG HWAR+CP+ G+
Sbjct: 95 PRFRQQENGLG------------------------CFKCGETSHWARECPNVRNGK---- 126
Query: 120 GSFSSRSRFGGVGVRGDYLG-GGRDRYIDDR-YDGGRYGDRDRYDSKDSKYGSRDRYVS- 176
R G G Y+ R+ DDR Y G RY DRD Y+ + +Y R+R S
Sbjct: 127 ---LIRPPERGYGPPRRYMSPSPPPRHRDDRGYRGSRYDDRDDYNREPPRYRDRERDRSP 183
Query: 177 -----DRYPPAGDR 185
DR PP+G R
Sbjct: 184 ADGYRDRSPPSGPR 197
>gi|17555352|ref|NP_499818.1| Protein DRR-2 [Caenorhabditis elegans]
gi|3879791|emb|CAB03342.1| Protein DRR-2 [Caenorhabditis elegans]
Length = 207
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 37/50 (74%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D+ ++ +RDSG +GF ++T+ + + M+ AI ++G +FG+RV+ VN+AQ
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQ 89
>gi|380709246|gb|AEE42608.1| glycine-rich RNA-binding protein 1, partial [Chelidonium majus]
Length = 146
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
KI+ +R++G RGFGF+T+A+ +AM D I M+G+ R I VN+
Sbjct: 39 KIINDRETGWSRGFGFVTFANEQAMKDVIEGMNGQNLDSRSIIVNEV 85
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
D IM +R SGRPRGFGF+T+AD A D + E H DR + V + P+ EV
Sbjct: 106 TDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEEDH--IIDDRAVEVKRTVPREEMEV 161
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK-MGGEVSDHG 70
+IML+ +GR RGFGF+T+ +++ E G + + + KA PK GG+ G
Sbjct: 198 QIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGKRVEIKKAVPKRNGGDYGSSG 257
Query: 71 YRGGGYSSGGRGSYGA 86
G+S+G G YGA
Sbjct: 258 KYHTGFSNGA-GGYGA 272
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 26/88 (29%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R + F+ Y +RR DDA++ ++G + ISV A+ GG+ +D+
Sbjct: 38 RCYAFVEYKERRDADDALKALNGTTLLNSKISVEWAK---GGKNADN------------- 81
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDCPS 110
+ CF CG+ GHW + CP+
Sbjct: 82 ----------NKCFACGQEGHWIKSCPN 99
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 109/284 (38%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPV-----KRGP 150
Query: 96 FKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD 151
R PS + G GG R +GG R + L RD Y+ R D
Sbjct: 151 PPRSGGPPPKRSTPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 RD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 301
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ +AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQEAINGMNGQSLGGRSIVVNEARP 81
>gi|254431254|ref|ZP_05044957.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
gi|197625707|gb|EDY38266.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
Length = 169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ LERD+GR RGF F+ AD A AI + G E R + +NKA+P+
Sbjct: 32 LPLERDTGRKRGFAFVEMADPEAESRAIEALQGSELMGRPLRINKAEPR 80
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 173
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF FI AD + AI + G E R + +NKA+P+
Sbjct: 28 TNCALPLERDTGRKRGFAFIEMADESTEEAAIEGLQGAELMGRPLRINKAEPR 80
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 152
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ A AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMASDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 25 FGFITYADRRAMDDAIREMHGREF-GDR-VISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
F F+ ++D R DDA + GR+F G R ++ K P+ G D RGG GRG
Sbjct: 49 FAFVEFSDPRDADDARYNLDGRDFDGSRMIVEFAKGVPRGQGGSRDRD-RGGDREYMGRG 107
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDC 108
P G CF CG GHWARDC
Sbjct: 108 P-----PPGSGRCFNCGIDGHWARDC 128
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++I+ + D+GR +GFGF+ A+ + AI ++GRE G R I+VN+A+P+
Sbjct: 30 VRIITDHDTGRSKGFGFVEMAEDSEANAAIEALNGREMGGRSITVNEARPR 80
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AI M+G+E R I+VN+AQ
Sbjct: 41 KIILDRETQRSRGFGFVTFSXXXXXRSAIEGMNGKELDGRNITVNEAQS 89
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 109/284 (38%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPV-----KRGP 150
Query: 96 FKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD 151
R PS + G GG R +GG R + L RD Y+ R D
Sbjct: 151 PPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 RD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 301
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ + LERD+GR RGF F+ AD AI + G E R + +NKA+P+
Sbjct: 28 SNCSLPLERDTGRKRGFAFVEMADEAVEASAIESLQGAELMGRPLRINKAEPR 80
>gi|323450994|gb|EGB06873.1| hypothetical protein AURANDRAFT_9018, partial [Aureococcus
anophagefferens]
Length = 91
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ + +R++GR RGF F++Y D R DDA+ M+GR G R + V+KAQP+
Sbjct: 18 DVHLPTDRETGRLRGFAFLSYNDTRDCDDALAAMNGR-VGGRTLRVSKAQPR 68
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ + LERD+GR RGF F+ AD AI + G E R + +NKA+P+
Sbjct: 28 SNCSLPLERDTGRKRGFAFVEMADEAVEASAIESLQGAELMGRPLRINKAEPR 80
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
D +M++R +GR RGFGF+TYA+ AM + + H E R + V +A+PK+
Sbjct: 175 TDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLSQQHDME--GRPMDVKRAEPKV 226
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ +M ++++G PRGFGF+++A AM+ A+ E H R + V KA P+
Sbjct: 72 TDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSEAH--MLDGRNLDVKKAVPR 122
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +++++ SGRPRGFGF+T + A++ ++G +FG R ++VN+A+P+
Sbjct: 30 TSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQALNGTDFGGRPLTVNEARPR 82
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
KI+L+R++ R RGFGF+T++ AI M+G+E R I+VN+AQ
Sbjct: 47 KIILDRETQRSRGFGFVTFSXXXXXRSAIEGMNGKELDGRNITVNEAQS 95
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 132
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I+VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSLGGRSITVNEARP 81
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I+VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSLGGRSITVNEARP 81
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+ +RD+GR +GFGF+ D R+ + AI ++G+E R ++VN+A+P+
Sbjct: 33 QIVTDRDTGRSKGFGFVEMGDSRSAEAAISALNGQEVDGRALTVNEARPR 82
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I+VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSLGGRSITVNEARP 81
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IM++ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK
Sbjct: 184 QIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK--------- 234
Query: 72 RGGGYSSGGRGSYG 85
GG +SS GR S+
Sbjct: 235 HGGDHSSNGRSSHA 248
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IM++ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK
Sbjct: 164 QIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK--------- 214
Query: 72 RGGGYSSGGRGSYG 85
GG +SS GR S+
Sbjct: 215 HGGDHSSNGRSSHA 228
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 1 MQQCLTH---NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + N K+M+ER++GR +GFGF+ AI+ M+G+ G R + VN+
Sbjct: 19 LQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQGMNGQSLGGRSLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|120613407|ref|YP_973085.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591871|gb|ABM35311.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 123
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ HG+ FG R + VN+
Sbjct: 19 LQQTFSQYGSVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGAHGQNFGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ + D A AI EM G+E R I VN A
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 112
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 60 ---------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFRAGRGGSGGTRGPPSRGGHMDDGGYSMHFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRR-EPLPSRRDVYLYP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG RPS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPRPSY 304
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 38/54 (70%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE 65
K+++++ +GR +G+GF+ AD A AI E++G E+ R ISV++A+P+ G+
Sbjct: 31 KVIMDKATGRSKGYGFVELADNAAGQKAIEELNGAEYDGRTISVSEARPRTEGD 84
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 26/89 (29%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R + FI Y +++ DDA++ ++G + ISV A+ GG+ +D+
Sbjct: 38 RCYAFIEYKEKKDADDALKALNGTTLLNSKISVEWAK---GGKNADN------------- 81
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDCPSA 111
+ CF CG+ GHW ++CP++
Sbjct: 82 ----------NKCFACGQEGHWIKNCPNS 100
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D KI+++RD+GR RGFGFIT+A A++ M +E R + VN A +
Sbjct: 68 DAKIIMDRDTGRSRGFGFITFATSEEASSALQAMDNKELDGRTVRVNYATER 119
>gi|33862287|ref|NP_893847.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9313]
gi|33640400|emb|CAE20189.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9313]
Length = 199
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ AD A AI + G E R + +NKA+P+
Sbjct: 29 NCALPLERDTGRKRGFAFVEMADESAEPAAIEALQGAEMMGRPLRINKAEPR 80
>gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi]
Length = 335
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
N++ ++ ++ R +GFGF+T+A+ +A++ A+ +MH E GD+ I +A P+
Sbjct: 132 NEVVFVINKEDNRHKGFGFVTFANEQAVNKAV-DMHFHEIGDKQIEAKRATPR 183
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 48/109 (44%), Gaps = 19/109 (17%)
Query: 6 THNNDLKIMLE-----RDSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQ 59
T + DL+ + R+ R + FI ++D R DDA + GRE G R+I
Sbjct: 22 TRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDAQYNLDGREVDGSRIIV----- 76
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
E + RG G G R G P G CF CG GHWARDC
Sbjct: 77 -----EFAKGVPRGSG---GSREYMGRGPPPGTGRCFNCGMDGHWARDC 117
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ I+++R++GR RGF F+ AD DAI ++G E R ++VN+A+P+
Sbjct: 84 VNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 134
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ I+++R++GR RGF F+ AD DAI ++G E R ++VN+A+P+
Sbjct: 84 VNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 134
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ I+++R++GR RGF F+ AD DAI ++G E R ++VN+A+P+
Sbjct: 84 VNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 134
>gi|124021728|ref|YP_001016035.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962014|gb|ABM76770.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9303]
Length = 202
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ AD A AI + G E R + +NKA+P+
Sbjct: 29 NCALPLERDTGRKRGFAFVEMADESAEPAAIEALQGAEMMGRPLRINKAEPR 80
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ + D A AI EM G+E R I VN A
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 112
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ + D A AI EM G+E R I VN A
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 112
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ + D A AI EM G+E R I VN A
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 112
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
+ FI + D R +DA+ E++GREF + +++ ++ + ++ G S
Sbjct: 34 SYAFIEFKDERDAEDALTELNGREFSGQRLAIEWSKKSGRFDAANASRGRGRDSRDRGSD 93
Query: 84 YGADRPGGQD-DCFKCGRPGHWARDC 108
G G + DCF CG+PGH+ARDC
Sbjct: 94 RGRGGDRGGNKDCFNCGKPGHFARDC 119
>gi|407941454|ref|YP_006857095.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899248|gb|AFU48457.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 125
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI+ +HG+ +G R + VN+
Sbjct: 19 LQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGVHGQNYGGRDLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ I+++R++GR RGF F+ AD DAI ++G E R ++VN+A+P+
Sbjct: 95 VNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 145
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 108/279 (38%), Gaps = 54/279 (19%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ D R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 -------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGR 100
P GG + D GY S RG R +
Sbjct: 96 PLRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPK 155
Query: 101 PGHWARDCPS-AVGGRGGAGGSFSS---RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYG 156
R PS V G GG R +GG R + L RD Y+ R DG Y
Sbjct: 156 -----RSTPSGPVRSSSGMGGRMPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YS 207
Query: 157 DRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYERDVGA 214
+D Y S+D SRD D PP D D S R YP GYG GY RD
Sbjct: 208 TKDSYSSRD-YLSSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYGRD--- 261
Query: 215 RAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
R SD + SGG RD Y S +AP P+RG PS+
Sbjct: 262 REYSD-HPSGGSYRDSYESYGNSCSAP---PTRGPPPSY 296
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ + D A AI EM G+E R I VN A
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 112
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++++R++GR RGFGF+ + D A AI EM G+E R I VN A
Sbjct: 44 DAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 93
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ + AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGNDAEAQAAINGMNGQPLGGRSIVVNEARP 81
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 108/284 (38%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ D R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPV-----KRGP 150
Query: 96 FKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD 151
R PS + G GG R +GG R + L RD Y+ R D
Sbjct: 151 PPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRR-EPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 RD---REYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 301
>gi|307107921|gb|EFN56162.1| hypothetical protein CHLNCDRAFT_22355 [Chlorella variabilis]
Length = 191
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D +M+++ +GR RGFGF+ + D+R D AI MH E R ISV +A
Sbjct: 45 TDAVVMMDKMTGRSRGFGFVMFGDKRDQDAAIEAMHNTEVDGRRISVTRA 94
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria
sulphuraria]
Length = 149
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D ++++ER++GR RGFGF++YA+ ++++ I + G++ R I VNKA +
Sbjct: 35 DARVVVERETGRSRGFGFVSYAEGSSVEECIAALDGQDMQGRTIRVNKAMSR 86
>gi|405954502|gb|EKC21922.1| Splicing factor, arginine/serine-rich 6 [Crassostrea gigas]
Length = 231
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 20 GRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSG 79
G +GF+ Y DRR +DA++ +GRE I V A+ + RGGG
Sbjct: 41 GAEMAYGFVDYEDRRDAEDALKYENGREICGSSIRVEWAKGNPRRPYAASSNRGGGM--- 97
Query: 80 GRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
D+C++C R GH+ARDCP+
Sbjct: 98 ------------YDECYRCHRTGHFARDCPN 116
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 8102]
Length = 214
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ AD D AI + G E R + +NKA+P+
Sbjct: 29 NCALPLERDTGRKRGFAFVEMADEAVEDAAIEGLQGAELMGRPLRINKAEPR 80
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF FI AD + AI + G E R + +NKA+P+
Sbjct: 28 TNCALPLERDTGRKRGFAFIEMADESTEEAAIEGLQGAELMGRPLRINKAEPR 80
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 39/52 (75%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ +++++ +GR RGFGF+T + + D A++ ++G+++ R ++VN+A+P+
Sbjct: 30 EVNLIMDKMTGRARGFGFVTMSTKEGADAAVQNLNGKQWQGRALTVNEARPR 81
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 3 QCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+ L H +IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK
Sbjct: 169 KVLEH----QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 224
Query: 63 GGEVSDHGYRGGGYSSGGRGSY 84
G SD+ G G SS G G Y
Sbjct: 225 HG--SDN--IGNGRSSQGGGGY 242
>gi|449546812|gb|EMD37781.1| hypothetical protein CERSUDRAFT_73600 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+M +RD+GR RGFGF+TY+ D AI ++ +E R I VN A P+
Sbjct: 60 VMRDRDTGRSRGFGFVTYSSSMEADSAISNLNEQELDGRRIKVNLANPR 108
>gi|392375173|ref|YP_003207006.1| RNP-1 like RNA-binding protein [Candidatus Methylomirabilis
oxyfera]
gi|258592866|emb|CBE69175.1| RNP-1 like RNA-binding protein (modular protein) [Candidatus
Methylomirabilis oxyfera]
Length = 140
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+KI+ +RD+GR RGF F+ ++ AI+ ++GR+ G R ++VN+A+ +
Sbjct: 60 DVKIITDRDTGRARGFAFVEMENQSDAQAAIQALNGRQVGGRALTVNEAKEQ 111
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 110/287 (38%), Gaps = 63/287 (21%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 --------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD 93
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----KR 150
Query: 94 DCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDR 149
R PS + G GG R +GG R + L RD Y+ R
Sbjct: 151 GPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSPR 209
Query: 150 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKER 206
DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 DDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRD 263
Query: 207 GYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 GYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 303
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ---------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
P GG + D GY S RG R
Sbjct: 96 LPPPPRSRGPPRGLRGARGGSGGTRGPPSRGGHMDDGGYSMNFTMSSSRGPLPVKRGPPP 155
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
+ R PS + G GG R +GG R + L RD Y+
Sbjct: 156 RSGGPPPK-----RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYNDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|330840365|ref|XP_003292187.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
gi|325077575|gb|EGC31278.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
Length = 288
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 22/91 (24%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
+GF F+ Y D+ A DDAI + + F R I V E+S+
Sbjct: 35 KGFCFVEYLDKNAADDAINSENKQFFLGRDIVV---------ELSN-------------S 72
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDCPSAVG 113
S G + G CF C GHWAR CP+ G
Sbjct: 73 SRGIKKDIGSGKCFFCDEEGHWARSCPNKKG 103
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +I+++R+SGR RGFGFIT+ A+ M G+E R I VN A +
Sbjct: 60 EARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|375012528|ref|YP_004989516.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
gi|359348452|gb|AEV32871.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
Length = 111
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++I+ ++ +GR +GFGF+ D A AI E++G +FG R I VNK++PK
Sbjct: 30 VRIITDKFTGRSKGFGFVEMPDDDAAQKAIDELNGSQFGGRDIVVNKSEPK 80
>gi|123967549|ref|YP_001008407.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. AS9601]
gi|123197659|gb|ABM69300.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. AS9601]
Length = 203
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
LERD+GR RGF FI AD AI + GRE R + +NKA+P
Sbjct: 34 LERDTGRKRGFAFIEMADEAIESTAIDGLQGRELMGRPLRINKAEP 79
>gi|392402152|ref|YP_006438764.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390610106|gb|AFM11258.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 117
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++++RD+GRP+GF F+ ++ AI M+GR DR I VN+A+P+
Sbjct: 31 KMIMDRDTGRPKGFAFVEMENKSEGIKAISGMNGRSMNDREIVVNEARPR 80
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ IM +R +GR RGF FI + D A+ + HG+EF R ++VN+A+P+
Sbjct: 32 VNIMQDRATGRSRGFAFIEMGSQAEADAAVAQYHGKEFQGRALTVNEARPR 82
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +I+++R+SGR RGFGFIT+ A+ M G+E R I VN A +
Sbjct: 60 EARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 108/284 (38%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T DA R+M+G+ + I V +A
Sbjct: 36 EIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAIKVEQATKPFFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPV-----KRGP 150
Query: 96 FKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD 151
R PS + G GG R +GG R + L RD Y+ R D
Sbjct: 151 PPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDSYSSRDYP-SSRD--TRDYTPPPRDYTYRDYCHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 RD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 301
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
M+Q + + K+M+ERD+GR +GFGF+ + AI M+G++ G R + VN+
Sbjct: 19 MEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAIEGMNGQQIGGRGLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|291244600|ref|XP_002742185.1| PREDICTED: alternative splicing factor SRp20/9G8, putative-like
[Saccoglossus kowalevskii]
Length = 275
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
+ F+ Y DRR +DAI+ +GRE + I V A+ G V
Sbjct: 45 AYAFVDYEDRRDAEDAIKYENGREVCGQSIVVEWARGPRRGFVQ---------------- 88
Query: 84 YGADRPGGQDDCFKCGRPGHWARDC 108
+D+C+KC R GHWARDC
Sbjct: 89 -------AEDECYKCHRSGHWARDC 106
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 113/288 (39%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 205 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFETGRRG 264
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG R
Sbjct: 265 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKR---G 321
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
G P R PS + G GG R +GG R + L RD Y+
Sbjct: 322 PPPRSVGPPAK--RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 378
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 379 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 432
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 433 DGYGRD---RDYSD-HPSGGSYRDSYDSYGNSRSAP---PTRGPPPSY 473
>gi|30692258|ref|NP_849525.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661647|gb|AEE87047.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 105
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D KI+ +R+SGR RGFGF+T+ D +AM DAI EM+
Sbjct: 34 DSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQALGGRSIVVNEARP 81
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARP 81
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+K++++R++GR RGFGFIT+A AI+ M G++ R I VN A +
Sbjct: 68 DVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
Length = 175
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARP 81
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARP 81
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R++GRPRGFGF+ ++ + AI ++G+EF R + VNKA+P+
Sbjct: 30 VQLPTDRETGRPRGFGFVEMSNEAEENAAIDALNGKEFKGRQLKVNKARPR 80
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQALGGRSIVVNEARP 81
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAI---REMHGREFGDRVISVNKAQPK 61
D +M+++D+GRPRGFGF+T+ +D + E+HG+ I V KAQP+
Sbjct: 228 DATLMMDKDTGRPRGFGFVTFESEAGVDACLAQELEIHGKP-----IEVKKAQPR 277
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAITGMNGQPLGGRSIVVNEARP 81
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0205]
Length = 157
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ D + D AI + G E R + +NKA+P+
Sbjct: 29 NCSLPLERDTGRKRGFAFVELVDPESEDRAIDALQGAELMGRPLRINKAEPR 80
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +I+++R++GR RGFGFITY AI+ + G++ R I VN A +
Sbjct: 70 DARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAISGMNGQPLGGRSIVVNEARP 81
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAI---REMHGREFGDRVISVNKAQPK 61
D +M+++D+GRPRGFGF+T+ +D + E+HG+ I V KAQP+
Sbjct: 111 DATLMMDKDTGRPRGFGFVTFESEAGVDACLSANLEIHGKP-----IEVKKAQPR 160
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP--KMG 63
D +M+++D+GRPRGFGF+T+ A++ + E H E + I V +AQP KMG
Sbjct: 111 DATLMMDKDTGRPRGFGFVTFDSDAAVERCL-EYHPLEILGKPIEVKRAQPRGKMG 165
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 142
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+TY+ D AI +H +E R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTYSATEEADAAIASLHDQELDGRRIKVNIANAR 82
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax
sp. CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax
sp. CF316]
Length = 110
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDPEAQAAINGMNGQPLGGRSIVVNEARP 81
>gi|160901477|ref|YP_001567059.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333917515|ref|YP_004491247.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160367061|gb|ABX38674.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333747715|gb|AEF92892.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 124
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
N K+M+ERD+GR +GFGF+ AI+ +HG+ G R + VN+A+P
Sbjct: 30 NSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP 81
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
T + DL+ + R D F F+ ++D R DDA ++GR+F I V A+
Sbjct: 22 TRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKG 81
Query: 61 KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
G Y G G P G CF CG GHWARDC
Sbjct: 82 GPRGPGGSREYLGRGP------------PPGSGRCFNCGIDGHWARDC 117
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +I+L+R+SGR RGFGF+TY AI M G+ R I VN A +
Sbjct: 58 EARIILDRESGRSRGFGFVTYTSSEEASAAITAMDGKTLDGRSIRVNHANER 109
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDH 69
+IML+ +GR RGFGF+T+ A++ + E + G + + + KA+PK G+ S +
Sbjct: 155 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSN 214
Query: 70 G--YRGGGYSSGGRGS 83
G RGGG+ RGS
Sbjct: 215 GRHSRGGGHRDSYRGS 230
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IM +R +GR RGFGFIT+ + +++ I + E G + + + KA+PK
Sbjct: 163 QIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEPK 212
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R +G+PRGFGF+TYAD +D I + H R + + + P+
Sbjct: 73 TDSVIMKDRHTGQPRGFGFVTYADASVVDKVIEDKH--ILDGRTVEIKRTIPR 123
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G
Sbjct: 291 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 343
>gi|303271523|ref|XP_003055123.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463097|gb|EEH60375.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 432
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++ +RD+GRP+GF FIT+ D A A++ M G+ R + V A+
Sbjct: 25 TDCKVITDRDTGRPKGFAFITFDDPNAAMQAVQTMSGQNVDGRSVRVEMAK 75
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|418528345|ref|ZP_13094295.1| RNA-binding protein RNP-2 [Comamonas testosteroni ATCC 11996]
gi|371454721|gb|EHN67723.1| RNA-binding protein RNP-2 [Comamonas testosteroni ATCC 11996]
Length = 130
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
N K+M+ERD+GR +GFGF+ AI+ +HG+ G R + VN+A+P
Sbjct: 30 NSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP 81
>gi|299531904|ref|ZP_07045304.1| RNA-binding protein RNP-2 [Comamonas testosteroni S44]
gi|298720079|gb|EFI61036.1| RNA-binding protein RNP-2 [Comamonas testosteroni S44]
Length = 128
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
N K+M+ERD+GR +GFGF+ AI+ +HG+ G R + VN+A+P
Sbjct: 30 NSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP 81
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|332529248|ref|ZP_08405212.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332041471|gb|EGI77833.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 110
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M++RDSGR +GFGF+ + AIR +HG+ G R + VN A+P
Sbjct: 33 KVMMDRDSGRSKGFGFVEMGSADQAEAAIRGLHGQNVGGRDMVVNIARP 81
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G
Sbjct: 298 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 350
>gi|221069837|ref|ZP_03545942.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714860|gb|EED70228.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 132
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
N K+M+ERD+GR +GFGF+ AI+ +HG+ G R + VN+A+P
Sbjct: 30 NSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP 81
>gi|254526608|ref|ZP_05138660.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9202]
gi|221538032|gb|EEE40485.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9202]
Length = 186
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+ + LERD+GR RGF FI AD AI + G E R + +NKA+P
Sbjct: 10 NCSLPLERDTGRKRGFAFIEMADEAIESTAIDGLQGTELMGRPLRINKAEP 60
>gi|89902981|ref|YP_525452.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
gi|89347718|gb|ABD71921.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
Length = 140
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+QQ + + K+M+ERD+GR +GFGF+ AI M+G+++G R + VN+
Sbjct: 19 LQQAFAAHGTVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQQYGGRGLVVNE 78
Query: 58 AQP 60
A+P
Sbjct: 79 ARP 81
>gi|264680851|ref|YP_003280761.1| RNA-binding protein RNP-2 [Comamonas testosteroni CNB-2]
gi|262211367|gb|ACY35465.1| RNA-binding protein RNP-2 [Comamonas testosteroni CNB-2]
Length = 128
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
N K+M+ERD+GR +GFGF+ AI+ +HG+ G R + VN+A+P
Sbjct: 30 NSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP 81
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G
Sbjct: 185 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 237
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
Length = 121
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+KI+ +R++GR +GFGFI D A AI E++G E R I VN+A+ K
Sbjct: 28 TTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEVNGAELYGRTIVVNQAEEK 80
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +I+++R++GR RGFGFITY AI+ + G++ R I VN A +
Sbjct: 70 DARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ +D A + AI + G E R + +NKA+P+
Sbjct: 29 NCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGLQGAELMGRPLRINKAEPR 80
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+I+++R+SGR RGFGF+TY AI + G+ R I VN A K
Sbjct: 60 RIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHANEKT 110
>gi|148241113|ref|YP_001226270.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147849423|emb|CAK26917.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 204
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ AD + AI + G E R + +NKA+P+
Sbjct: 29 NCSLPLERDTGRKRGFAFVEMADEATEERAIEGLQGTELMGRPLRINKAEPR 80
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q T + ++ +R++GR RGFGF++++ + ++AI+EM G+E R I VN
Sbjct: 51 LKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNL 110
Query: 58 AQPK 61
A +
Sbjct: 111 ATER 114
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARP 81
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 108/284 (38%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ D R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG R
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSG 155
Query: 96 FKCGRPGHWARDCPS-AVGGRGGAGGSFSS---RSRFGGVGVRGDYLGGGRDRYIDDRYD 151
+ R PS V G GG R +GG R + L RD Y+ R D
Sbjct: 156 GPPPK-----RSTPSGPVRSSSGMGGRMPVSRGRDSYGGPPRR-EPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDSYSSRD-YLSSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y S +AP P+RG PS+
Sbjct: 265 RD---REYSD-HPSGGSYRDSYESYGNSCSAP---PTRGPPPSY 301
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q T + ++ +R++GR RGFGF++++ + ++AI+EM G+E R I VN
Sbjct: 51 LKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNL 110
Query: 58 AQPK 61
A +
Sbjct: 111 ATER 114
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDH 69
+IML+ +GR RGFGF+T+ A++ + E + G + + + KA+PK G+ S +
Sbjct: 211 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSN 270
Query: 70 G--YRGGGYSSGGRGS 83
G RGGG+ RGS
Sbjct: 271 GRHSRGGGHRDSYRGS 286
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM ++ + PRGFGF+T++D +D + + H R + V + PK
Sbjct: 120 TDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEH--VIDGRTVEVKRTVPK 170
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDH 69
+IML+ +GR RGFGF+T+ A++ + E + G + + + KA+PK GG+ S +
Sbjct: 218 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGGGDSSSN 277
Query: 70 G--YRGGGY 76
G RGGG+
Sbjct: 278 GRHSRGGGH 286
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM ++ + PRGFGF+T++D +D + + H R + V + PK
Sbjct: 126 TDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDAH--VIDGRTVEVKRTVPK 176
>gi|123965247|ref|YP_001010328.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9515]
gi|123199613|gb|ABM71221.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9515]
Length = 222
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
LERD+GR RGF F+ AD AI + G E R + +NKA+P+
Sbjct: 34 LERDTGRKRGFAFVEMADEALETTAIEGLQGTELMGRPLRINKAEPR 80
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+++ TH D+ KI+++ +S R RGFGFITYA AI + G+E R I V++
Sbjct: 47 LREAFTHYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAKAAIMALDGKELHGRNIRVSE 106
Query: 58 AQPKMGG 64
A + G
Sbjct: 107 ANERTSG 113
>gi|319765041|ref|YP_004128978.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827233|ref|YP_004390536.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317119602|gb|ADV02091.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312605|gb|AEB87020.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 116
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI+ HG+ +G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAIQGAHGQNYGGRDLVVNEARP 81
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+I+++R+SGR RGFGF+TY AI + G+ R I VN A K
Sbjct: 60 RIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHANEKT 110
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D K++++R++GR RGFGF+ + D A AI EM G++ R I VN A +
Sbjct: 63 DAKVIVDRETGRSRGFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANER 114
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ +D A + AI + G E R + +NKA+P+
Sbjct: 59 NCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGLQGAELMGRPLRINKAEPR 110
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D +I+++R+SGR +GFGF+TY AI+ + G++ R + VN A
Sbjct: 72 DARIIMDRESGRSKGFGFVTYNTVEEASSAIQALDGQDLYGRRVGVNFAN 121
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVS 67
D IM + SGRPRGFGF+T+A+ D+ + + H + RV+ V + P+ +V+
Sbjct: 67 TDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQEHTID--HRVVEVKRTVPREDVDVT 123
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+ +IML+ ++GR RGFGF+T+ D +++ E G + + + +A+PK G
Sbjct: 157 ECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSG 211
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 144
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G+ G R I VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDADAQAAINGMNGQSLGGRSIVVNEARP 81
>gi|27527723|emb|CAC86462.1| glycin-rich RNA binding protein [Polytomella sp. Pringsheim
198.80]
Length = 177
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+ I L+R+SGR RGFGF+T A DAI + +G EF R I VN+A P
Sbjct: 31 EASIALDRESGRSRGFGFVTLPADVA-KDAIEKTNGAEFMGRNIKVNEASP 80
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
+ ++R++G+ RGFGF+T+A A+D A+ E++G+E R I+++K+ K +V + +
Sbjct: 340 VQMDRNTGKSRGFGFVTFASPEAVDKAL-ELNGKEIDGRPINIDKSVEKDQNQVRERRAK 398
Query: 73 GGGYSSGGRGSY 84
G ++ S
Sbjct: 399 AFGDATSAPSSV 410
>gi|156349371|ref|XP_001622030.1| hypothetical protein NEMVEDRAFT_v1g248588 [Nematostella vectensis]
gi|156208427|gb|EDO29930.1| predicted protein [Nematostella vectensis]
Length = 278
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 26/89 (29%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
R + F F+ R D+AI+ + F I V A+ K
Sbjct: 83 RVKNFAFVHMVGRENADNAIKALDDSLFMGTHIQVQHAKSK------------------- 123
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCP 109
+P +D+CF CG+ GHWARDCP
Sbjct: 124 ------GKPA-EDECFHCGKCGHWARDCP 145
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 18/109 (16%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQ 59
T DL+ + R D F F+ ++D R DDA ++GR+F G R+I
Sbjct: 22 TRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKG 81
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
GG Y G G P G CF CG GHWARDC
Sbjct: 82 GPRGGSGGSREYLGRGP------------PPGSGRCFNCGIDGHWARDC 118
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+K++++R++GR RGFGF+T+A AI+ M G++ R I VN A +
Sbjct: 68 DVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+K++++R++GR RGFGF+T+A AI+ M G++ R I VN A +
Sbjct: 68 DVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 18/109 (16%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQ 59
T DL+ + R D F F+ ++D R DDA ++GR+F G R+I
Sbjct: 22 TRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKG 81
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
GG Y G G P G CF CG GHWARDC
Sbjct: 82 GPRGGSGGSREYLGRGP------------PPGSGRCFNCGIDGHWARDC 118
>gi|392597031|gb|EIW86353.1| hypothetical protein CONPUDRAFT_133797 [Coniophora puteana
RWD-64-598 SS2]
Length = 453
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Query: 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+Q C + + +E +G FGF+ + R A ++++ + + F I V +
Sbjct: 100 LQNCFGKLGSI-VAIELKTG----FGFVEFDSREAAEESVAKYNEGYFMGNKIRVELSHS 154
Query: 61 KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 110
+ G ++ H SS CFKCG+PGHWAR+CP+
Sbjct: 155 R--GRITKH------VSSDPSA------------CFKCGQPGHWARECPN 184
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
T + DL+ + R D F F+ ++D R DDA ++GR+F I V A+
Sbjct: 54 TRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKG 113
Query: 61 KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
G Y G G P G CF CG GHWARDC
Sbjct: 114 GPRGPGGSREYLGRGP------------PPGSGRCFNCGIDGHWARDC 149
>gi|240281085|gb|EER44588.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 134
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY- 71
++ +RD+ R RGFGF+ +A D A+ M +EF RVI V+KA + ++ GY
Sbjct: 18 VVKDRDTNRSRGFGFVRFASDAEADAAMNAMSNQEFDGRVIRVDKASDRSSAPRNEGGYH 77
Query: 72 -RGGGYS 77
RG GY+
Sbjct: 78 GRGNGYN 84
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDH 69
+IML+ +GR RGFGF+T+ A++ + E + G + + + KA+PK G+ S +
Sbjct: 80 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSN 139
Query: 70 G--YRGGGYSSGGRGS 83
G RGGG+ RGS
Sbjct: 140 GRHSRGGGHRDSYRGS 155
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 60 ---------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFRAGRGGSGGTRGPPSRGGHMDDGGYSMHFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGP-PRREPLPSRRDVYLYP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|42521960|ref|NP_967340.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|39574490|emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 120
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++++R++GR +GFGF+ +D A D AI +G E G R I++++A+P+
Sbjct: 33 KVIMDRETGRSKGFGFVEMSDDSAADQAIERGNGIELGGRPINISEARPQ 82
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
KI+ +R++GR RGFGFITYA AI + G++ R I VN A +
Sbjct: 61 KIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANERT 111
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G
Sbjct: 185 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 237
>gi|222112646|ref|YP_002554910.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732090|gb|ACM34910.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 121
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI+ HG+ +G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAIQGAHGQNYGGRDLVVNEARP 81
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P +
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSLESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRRRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|452836287|gb|EME38231.1| hypothetical protein DOTSEDRAFT_140462 [Dothistroma septosporum
NZE10]
Length = 170
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ +A+ A D AI+ M+ EF R I V+KA
Sbjct: 30 VVKDRDTGRSRGFGFVRFAEDSAADAAIQAMNNVEFDGRTIRVDKA 75
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+KI ++R++GRPRGF F+ A AI ++ G + +R I VNKA+P+
Sbjct: 30 VKIPMDRETGRPRGFAFVDLESETAEQAAIDDLDGATWNNREIRVNKAEPR 80
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGFIT+ + A AI ++G+E R I VN A +
Sbjct: 60 DAIVMQDRETGRSRGFGFITFKEEAAAPGAIEALNGQELDGREIRVNYANSQ 111
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGFITYAD +D I E H
Sbjct: 69 TDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEEPH 104
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGFIT+ A+DD + + +F + + KA+PK
Sbjct: 158 DHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNKIDFAGAQVEIKKAEPK 209
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++ R RGFGF+T+ + A+ + I + H E +V+ + +A+PK
Sbjct: 235 TDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTH--ELHGKVVEIKRAEPK 285
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M ++ SG+PRGFGF+T+AD +D + E H R + V +A P+
Sbjct: 129 TDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEESHT--IDGRTVEVKRAIPR 179
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 24/87 (27%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFG--DRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
+ F+ + D R +DA++E +GRE+ V+ K P+ + S Y
Sbjct: 45 AYAFLDFEDHRDAEDALKEENGREYQGVSMVVEWAKGAPRRQ-QSSQQAY---------- 93
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
D+C+KC R GHWARDC
Sbjct: 94 -----------DECYKCHRSGHWARDC 109
>gi|221114604|ref|XP_002164525.1| PREDICTED: uncharacterized protein LOC100215128 [Hydra
magnipapillata]
Length = 307
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query: 89 PGGQDDCFKCGRPGHWARDCP---SAVGGRGGAGGSF-------SSRSRFGG---VGVRG 135
P G D CF+CG+ GHWA++C + + GR G G +SR RF G + R
Sbjct: 87 PEGDDLCFECGKGGHWAKECSQRRARLEGRRGHTGPIRGRDPYSNSRERFNGPPQIPNRN 146
Query: 136 DYL-------GGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAG 188
YL RD Y D Y Y RD Y Y SRD Y D P G
Sbjct: 147 TYLRDSYPRNPYTRDAYYRDPYACDMYS-RDLYSH--DPYLSRDPYCPD---PYGSEYEL 200
Query: 189 DRYG--GSDRYPVNGYGKERGYERDVGARAGS-DRYASGGPARDDGRGYRSRAAPYD 242
DRY G R P+ Y R V A + ++ A G +R D Y R PYD
Sbjct: 201 DRYSVIGRSRSPI----LRSPYIRPVDPYAVAREKLAYGDVSRID--PYTIRRDPYD 251
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGFITY A+DD + + EF + + KA+PK
Sbjct: 162 DHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPK 213
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 1 MQQCLTH------NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
+ Q + H D IM +R +G+PRGFGFITYAD +D I + H
Sbjct: 57 IAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTH 106
>gi|126695350|ref|YP_001090236.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9301]
gi|126542393|gb|ABO16635.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9301]
Length = 217
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
LERD+GR RGF FI AD AI + G E R + +NKA+P+
Sbjct: 34 LERDTGRKRGFAFIEMADEAIESTAIDGLQGTELMGRPLRINKAEPR 80
>gi|347756146|ref|YP_004863709.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
gi|347588663|gb|AEP13192.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
Length = 112
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +RD+ R RGFGF+ + + AI HG EF R ++VN+A+P+
Sbjct: 31 QVVEDRDTNRSRGFGFVEFTSTEDGNRAIEMFHGTEFNGRTLTVNEARPR 80
>gi|449463368|ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
Length = 347
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
D IM +R +G+PRGFGFITYAD +D I + H + + + + PK G+ D
Sbjct: 46 TDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTH--VINGKQVEIKRTIPKGQGQSKD 103
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+++R+SGR RGFGF+TY AI + G+ R I VN A K
Sbjct: 60 RIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHANEK 109
>gi|242050818|ref|XP_002463153.1| hypothetical protein SORBIDRAFT_02g038590 [Sorghum bicolor]
gi|241926530|gb|EER99674.1| hypothetical protein SORBIDRAFT_02g038590 [Sorghum bicolor]
Length = 293
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+I+ +R+SGR +GFGFITY A+ M G+E R I V+ A
Sbjct: 39 RIITDRESGRSKGFGFITYTSTEEASAAVTSMDGKELQGRSIRVDHAN 86
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ D DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTDPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 87 RGTRGGAFGAHGRG 100
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 107/284 (37%), Gaps = 59/284 (20%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ---------- 59
++ +M +R++ + RGF F+T+ D R+M+G+ + I V +A
Sbjct: 36 EILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 60 ------------------------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 95
P GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPV-----KRGP 150
Query: 96 FKCGRPGHWARDCPS-AVGGRGGAGGSFSS---RSRFGGVGVRGDYLGGGRDRYIDDRYD 151
R PS V G GG R +GG R + L RD Y+ R D
Sbjct: 151 PPRSGGPPPKRSTPSGPVRSSSGMGGRMPVSRGRDSYGGPPRR-EPLPSRRDVYLSPRDD 209
Query: 152 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDR--YPVNGYGKERGYE 209
G Y +D Y S+D SRD D PP D D S R YP GYG GY
Sbjct: 210 G--YSTKDSYSSRD-YLSSRD--TRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYG 264
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y S +AP P+RG PS+
Sbjct: 265 RD---REYSD-HPSGGSYRDSYESYGNSCSAP---PTRGPPPSY 301
>gi|393247796|gb|EJD55303.1| hypothetical protein AURDEDRAFT_109681 [Auricularia delicata
TFB-10046 SS5]
Length = 523
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 23/93 (24%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
G+GF+ + + A ++++ + H F I V E+S GR
Sbjct: 124 GYGFVEFETQEAAEESVAKYHEGWFMGNKIKV---------EISR-----------GRNK 163
Query: 84 YGADRPGGQDDCFKCGRPGHWARDCPSAVGGRG 116
D+PG CFKCG+ GHWAR+CP G G
Sbjct: 164 GKGDQPGA---CFKCGQMGHWARECPHGGGTNG 193
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
D IM +R +G+PRGFGF+TYAD +D I + H + + + + PK G+ D
Sbjct: 46 TDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDTH--VINGKQVEIKRTIPKGSGQSKD 103
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+ + ++ R RGFGFI + +D+ + E + + + + KA+PK
Sbjct: 137 QIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPK 186
>gi|115384864|ref|XP_001208979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196671|gb|EAU38371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 157
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63
++ +RD+GR RGFGF+T+ + D A+ E++ +EF R+I V+ A + G
Sbjct: 60 VVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQEFDGRIIRVDFASERNG 110
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFEGGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG R
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSHGGHMDDGGYSMNFNMSSSRGPLPVKRGPPP 155
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
+ R PS + G GG R +GG R + L RD Y+
Sbjct: 156 RSGGPPPK-----RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVN 56
N + I+ +R +GRP+G+ ++ + + ++D AI + G+EF DR+ISVN
Sbjct: 99 NRVTILFDRFTGRPKGYAYVEFESQSSVDSAIG-LSGQEFKDRIISVN 145
>gi|389748310|gb|EIM89487.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 305
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 20 GRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
GRP GFGF+T+ D ++ AI EM+G E RV+ V++A
Sbjct: 82 GRPMGFGFVTFEDPASVKAAIEEMNGEELDGRVVEVSEA 120
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGF+TYAD +D I++ H
Sbjct: 1955 DSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQDSH 1989
Score = 42.4 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IM + + R RGFGFIT+ +A+DD + + + E + + KA+PK
Sbjct: 2045 QIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAGGQVEIKKAEPK 2094
>gi|116074289|ref|ZP_01471551.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. RS9916]
gi|116069594|gb|EAU75346.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. RS9916]
Length = 191
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
LERD+GR RGF FI AD AI + G E R + +NKA+P+
Sbjct: 34 LERDTGRKRGFAFIEMADEAMETAAIDALQGVELMGRPLRINKAEPR 80
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG Y + GRG
Sbjct: 87 RGTRGGAYGAHGRG 100
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 8/55 (14%)
Query: 10 DLKIMLERDSGRPRGFGFITY---ADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M+++D+GRPRGFGF+T+ A A A E+HG+ I V KAQP+
Sbjct: 126 DATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLEIHGKP-----IEVKKAQPR 175
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF FIT+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFITFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+D ++M + +SG+ RG+GF+ + D+ + AI M+G G R I VN A K G
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQG 187
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+ +++ +R++GR RGFGF+ Y+D A +AI M G+E R + VN A + G
Sbjct: 64 TEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 119
>gi|121596408|ref|YP_988304.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608488|gb|ABM44228.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 121
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI HG+ +G R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAIHGAHGQNYGGRDLVVNEARP 81
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G R ++VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEALAAIEAMNGHSLQGRALTVNEARP 81
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI M+G R ++VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEALAAIEAMNGHSLQGRALTVNEARP 81
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSHRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R +G+PRGFGF+TYAD +D I++ H + + + + PK
Sbjct: 2055 TDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTH--VINGKQVEIKRTIPK 2105
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
N K+M++R++GR +GFGF+ AI ++G+ G R I VN+A+P+
Sbjct: 30 NSAKVMMDRETGRSKGFGFVEMGSDPEAQAAINGLNGQAIGGRAIVVNEARPR 82
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+D ++M + +SG+ RG+GF+ + D+ + AI M+G G R I VN A K G
Sbjct: 131 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQG 186
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGFITYA AI + G++ R I VN A +
Sbjct: 61 KIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGD-RVISVNKAQPK 61
D IM +R +G PRGFGF+TYAD +D I++ H F D +++ + + P+
Sbjct: 78 TDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKDKH---FIDGKMVEIKRTIPR 128
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 3 QCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ L H +IM + +GR RGFGF+T+ A+++ + E G + + + KA+PK
Sbjct: 164 KVLEH----QIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAEPK 218
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K+M++R++GR +GFGF+ A AI +HG R I VN A+P+
Sbjct: 33 KVMMDRETGRSKGFGFVEMASAEVAQAAITGLHGMSVDGRSIVVNLARPR 82
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-NSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K+M++RD+GR +GFGF+ AI M+G+ R I VN+A+P+
Sbjct: 33 KVMMDRDTGRSKGFGFVEMGSDAEAQAAIEGMNGQSLSGRAIVVNEARPR 82
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
+ +R++GR RGFGF+T+A A+D A+ E++G+E R I+V+K+ K +V
Sbjct: 70 VQTDRNTGRSRGFGFVTFASPEAVDKAL-ELNGKEIDGRSINVDKSVEKDQNQV 122
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 17 RDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
RDSGRP+GFG++ + D + A + G+E R I + +QP
Sbjct: 174 RDSGRPKGFGYVEFEDIESAKKAHESLVGQEIAGRAIRLEFSQP 217
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IM++ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G
Sbjct: 181 QIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 233
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IM++ +GR RGFGF+T+ +++ I E R+ G + + + KA+PK G
Sbjct: 181 QIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 233
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
D IM +R +G+PRGFGFITYAD +D I + H + + + + PK G+ D
Sbjct: 46 TDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTH--VINGKQVEIKRTIPKGSGQSKD 103
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ + ++ +R++ RGF F+++ + + D+AIR MHG E R ++V KA+
Sbjct: 35 SQVMVLRDRETNVSRGFAFMSFESQDSADEAIRRMHGVEIMGRCVTVRKAE 85
>gi|78778398|ref|YP_396510.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9312]
gi|78711897|gb|ABB49074.1| RNA-binding region RNP-1 [Prochlorococcus marinus str. MIT 9312]
Length = 222
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ LERD+GR RGF F+ AD AI + G E R + +NKA+P+
Sbjct: 32 LPLERDTGRKRGFAFVEMADEAIESAAIDGLQGTELMGRPLRINKAEPR 80
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY- 71
++ +RD+ R RGFGF+ +A D A+ M +EF RVI V+KA + ++ GY
Sbjct: 33 VVKDRDTNRSRGFGFVRFASDAEADAAMNAMSNQEFDGRVIRVDKASDRSSAPRNEGGYH 92
Query: 72 -RGGGYS 77
RG GY+
Sbjct: 93 GRGNGYN 99
>gi|403362231|gb|EJY80837.1| hypothetical protein OXYTRI_21772 [Oxytricha trifallax]
Length = 236
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 25 FGFITYADRRAMDDAIREMHGREFGDRVISVN------KAQPKMGGEVSDHGYRGGGYSS 78
F FI Y + R ++AI E++ ++FG + I + K K GG R
Sbjct: 35 FAFIEYKEERDGEEAINELNNKDFGGQKIGIEWSKRSGKFDSKSGGNSRGRSRRDDSRDR 94
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
G G G DC+ CG+PGH+ARDC
Sbjct: 95 GRDGDRRVG--TGNKDCYNCGKPGHFARDC 122
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPTFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 3 QCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
Q D+ +M ++++ RPRGFGFIT+ A+D +++ + G +++ V +A P+
Sbjct: 136 QTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQKTF-HDLGGKLVEVKRALPR 193
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+M ++ +GRPRGFGF+ +AD +D A+++ H R + V +A
Sbjct: 37 VMRDKTTGRPRGFGFVVFADPAVVDRALQDPH--TLDGRTVDVKRA 80
>gi|168700972|ref|ZP_02733249.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 117
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+++R++GRPRGF F+ +D + AI+ ++G + G R ++VN+A+P+
Sbjct: 31 QIVMDRETGRPRGFAFVEMSD--GGEQAIQALNGTQVGGRSLTVNEAKPR 78
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGFITYAD +D I + H
Sbjct: 69 TDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTH 104
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGFITY A+DD + + EF + + KA+PK
Sbjct: 160 DHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPK 211
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+++RD+GR RGFGF+TY AI+ M G++ R + VN A +
Sbjct: 70 RIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSHGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSHGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG R
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPP 155
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
+ R PS + G GG R +GG R + L RD Y+
Sbjct: 156 RSGGPPPK-----RSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
D IM +R +G+PRGFGFIT+AD +D I + H + + + + PK G
Sbjct: 46 TDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDTH--VINGKQVEIKRTIPKGAG 99
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D +M +R++GR RGFGF+T++ + AI M+ +EF R I V++A
Sbjct: 29 TDAIVMTDRETGRSRGFGFVTFSSQEEASAAIEAMNEQEFEGRQIRVSEA 78
>gi|318042980|ref|ZP_07974936.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0101]
Length = 176
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+ LERD+GR RGF F+ AD + AI + G E R + +NKA+P
Sbjct: 32 LPLERDTGRKRGFAFVELADEDSESRAIDALQGAELMGRPLRINKAEP 79
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF F+ + D R +DAIR + GR R V + K G YRG S GR
Sbjct: 43 PPGFAFVEFEDARDAEDAIRGLDGRTICGRRARVEMSNGKSGS----GRYRGPPPRSRGR 98
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
+ DR C++CG GH+ARDC
Sbjct: 99 PFHPDDR------CYECGDRGHYARDC 119
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF F+ + D R +DAIR + GR R V + K G YRG S GR
Sbjct: 43 PPGFAFVEFEDARDAEDAIRGLDGRTICGRRARVEMSNGKSGS----GRYRGPPPRSRGR 98
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
+ DR C++CG GH+ARDC
Sbjct: 99 PFHPDDR------CYECGDRGHYARDC 119
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IML+ +GR RGFGF+T+ A++ + E + G + + + KA+PK
Sbjct: 219 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK 268
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM ++ + PRGFGF+T++D +D + + H R + V + PK
Sbjct: 127 TDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEH--VIDGRTVEVKRTVPK 177
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IML+ +GR RGFGF+T+ A++ + E + G + + + KA+PK
Sbjct: 219 QIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK 268
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM ++ + PRGFGF+T++D +D + + H R + V + PK
Sbjct: 127 TDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEH--VIDGRTVEVKRTVPK 177
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ + +++ +GRPRGF F+T + A +++G + G R ++VN+A+PK
Sbjct: 31 TDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAEKLNGVDLGGRALTVNEARPK 83
>gi|376295896|ref|YP_005167126.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323458457|gb|EGB14322.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
Length = 88
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+K++ +R++GRPRGFGF+ AD A DAI + G++FG R + VN+A+P+
Sbjct: 32 VKLIEDRETGRPRGFGFVEMADDAAALDAIEALDGKDFGGRNLKVNEAKPR 82
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ A+ M+G R ++VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGTDAEALAAVEAMNGHSLQGRALTVNEARP 81
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 87 RGTRGGAFGAHGRG 100
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+KI+ +RD+GR RGF F+ D +A+ EM+G++ R + VN+A+P+
Sbjct: 30 VKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAEMNGKDLKGRNLVVNEARPR 80
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 6 THNNDLKIMLERDSGRPRG------FGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
T + DL+ + R GR RG F F+ ++D R DDA + GR+ I V A+
Sbjct: 22 TRSRDLERVFSR-YGRVRGVDMKNDFAFVEFSDPRDADDARYNLDGRDVEGSRIIVEFAK 80
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
GG S R G P G CF CG GHWARDC
Sbjct: 81 -------------GGPRGSRDREYMGRGPPPGSGRCFNCGIDGHWARDC 116
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|218199974|gb|EEC82401.1| hypothetical protein OsI_26770 [Oryza sativa Indica Group]
Length = 201
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ +I+++RD+G+ +G+GFITY A+ M G++ R++ V+ A
Sbjct: 22 EARIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTAN 71
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 37 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 96
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 97 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 151
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 152 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 210
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 211 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 264
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 305
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 83 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 142
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG R
Sbjct: 143 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPP 202
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
+ R PS + G GG R +GG R + L RD Y+
Sbjct: 203 RSGGPPPK-----RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 256
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 257 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 310
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 311 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 351
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF F+ + D R DDA+R + GR R + V +P G ++ R G S GR
Sbjct: 46 PPGFAFVEFEDPRDADDAVRGLDGRSIAGRRVRV---EPSNG--MARRRGRDRGVSRRGR 100
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
+ DR C++CG GH+ARDC
Sbjct: 101 PFHPDDR------CYQCGERGHYARDC 121
>gi|149918513|ref|ZP_01907002.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149820589|gb|EDM80001.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 136
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++L+RD+GR RGFGF+T D A +AI +M+G R I VN+A
Sbjct: 1 MILDRDTGRSRGFGFVTMGDADAAKEAIEKMNGAIVDGRAIRVNEANE 48
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYSNSRSAP---PTRGPPPSY 304
>gi|33860573|ref|NP_892134.1| RNA recognition motif-containing protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633515|emb|CAE18472.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 221
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
LERD+GR RGF F+ AD AI + G E R + +NKA+P
Sbjct: 55 LERDTGRKRGFAFVEMADEALETSAIDGLQGTELMGRPLRINKAEP 100
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVN--KAQPKMGGEVSD 68
K++ ++GR +GFGF+ + D R +DAI++ G+ R I N K QP G
Sbjct: 64 TKVVFNPETGRSKGFGFVKFDDARDAEDAIKQADGQTMDGRTIKCNFAKYQPHRG---QP 120
Query: 69 HGYRGG 74
H +RGG
Sbjct: 121 HAFRGG 126
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 87 RGTRGGAFGAHGRG 100
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+ +++ +R++GR RGFGF+ Y+D A +AI M G+E R + VN A + G
Sbjct: 64 TEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAG 119
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 44.3 bits (103), Expect = 0.048, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGFITYAD +D I + H
Sbjct: 2004 DSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDPH 2038
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGFIT+ A+DD + + +F + + KA+PK
Sbjct: 2092 DHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPK 2143
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 44.3 bits (103), Expect = 0.048, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T+ + + AI ++ +E R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTFGSSQEAETAIISLNEQELDGRRIKVNLANAR 82
>gi|225424701|ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
gi|296086540|emb|CBI32129.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ F+ +ADRR DAIR + G+ G RV E+S + GGG GG
Sbjct: 36 RPPGYAFVEFADRRDAVDAIRGLDGKS-GWRV------------ELSHNSKGGGGGGGGG 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
G G C++CG PGH+AR+C +G RG G
Sbjct: 83 GGRDRGRGGGEDLKCYECGEPGHFARECRLRIGSRGMGSG 122
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIR++ G+ G RV E+S R GG
Sbjct: 115 KPPGFAFIDFDDRRDAQDAIRDIDGKN-GWRV------------ELS----RNASSGRGG 157
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
R YG+ + C++CG GH+AR+C
Sbjct: 158 RDRYGS----SESKCYECGETGHFAREC 181
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++M+ERD+GR +GFGF+ A++ M+G+ G R + VN+A+P
Sbjct: 33 RVMMERDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVVNEARP 81
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++M+ERD+GR +GFGF+ A++ M+G+ G R + VN+A+P
Sbjct: 33 RVMMERDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVVNEARP 81
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++++R++GR RGFGF+ + AI+E+ G+ R +SV++A+PK
Sbjct: 31 KVIMDRETGRSRGFGFVEMSSDEEARKAIKELEGKPVEGRSLSVSEARPK 80
>gi|115466838|ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21A; AltName:
Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|215686646|dbj|BAG88899.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIR++ G+ G RV E+S R GG
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRDIDGKN-GWRV------------ELS----RNASSGRGG 78
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
R YG+ + C++CG GH+AR+C
Sbjct: 79 RDRYGS----SESKCYECGETGHFAREC 102
>gi|427703571|ref|YP_007046793.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427346739|gb|AFY29452.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 178
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
LERD+GR RGF FI AD AI + G E R + +NKA+P+
Sbjct: 34 LERDTGRKRGFAFIEMADADTETRAIDALQGAELMGRPLRINKAEPR 80
>gi|226502815|ref|NP_001147002.1| LOC100280612 [Zea mays]
gi|195606380|gb|ACG25020.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195616164|gb|ACG29912.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413924261|gb|AFW64193.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413924262|gb|AFW64194.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
Length = 163
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 24/89 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G K G +V S+ G
Sbjct: 36 KPPGFAFIDFDDRRDAEDAIRDLDG---------------KNGWKVE------LSRSTNG 74
Query: 81 RGSYGADRPGGQDD-CFKCGRPGHWARDC 108
RGS DR GG + C++CG GH+AR+C
Sbjct: 75 RGS--RDRHGGSESKCYECGETGHFAREC 101
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 90 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 143
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 144 RGTRGGAFGAHGRG 157
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 21/88 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIR++ G+ G RV E+S R GG
Sbjct: 115 KPPGFAFIDFDDRRDAQDAIRDIDGKN-GWRV------------ELS----RNASSGRGG 157
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
R YG+ + C++CG GH+AR+C
Sbjct: 158 RDRYGS----SESKCYECGETGHFAREC 181
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 87 RGTRGGAFGAHGRG 100
>gi|147821435|emb|CAN74578.1| hypothetical protein VITISV_009111 [Vitis vinifera]
Length = 318
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ F+ +ADRR DAIR + G+ G RV E+S + GGG GG
Sbjct: 151 RPPGYAFVEFADRRDAVDAIRGLDGKS-GWRV------------ELSHNSKGGGGGGGGG 197
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
G G C++CG PGH+AR+C +G RG G
Sbjct: 198 GGRDRGRGGGEDLKCYECGEPGHFARECRLRIGSRGMGSG 237
>gi|353232304|emb|CCD79659.1| putative cellular nucleic acid binding protein [Schistosoma
mansoni]
Length = 184
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 93 DDCFKCGRPGHWARDCPSA 111
DDCFKCGRPGH+ARDC +A
Sbjct: 3 DDCFKCGRPGHYARDCQAA 21
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D K++ +R++GR RGFGF+T+A+ +A + M G E R I V+ A K
Sbjct: 35 TDCKVITDRETGRSRGFGFVTFANDSDAANAKKCMDGTELDSRQIRVDYASKK 87
>gi|115462263|ref|NP_001054731.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|46981336|gb|AAT07654.1| unknown protein [Oryza sativa Japonica Group]
gi|113578282|dbj|BAF16645.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|215693366|dbj|BAG88748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768462|dbj|BAH00691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630300|gb|EEE62432.1| hypothetical protein OsJ_17224 [Oryza sativa Japonica Group]
Length = 338
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 25 FGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY 84
+GF+ ++D R +DA ++ GR++ I V A RG GG Y
Sbjct: 53 YGFVEFSDPRDANDARLDLDGRKYDGSDIIVQFA-------------RGVERGLGGSRGY 99
Query: 85 GADRPGGQDDCFKCGRPGHWARDCPS 110
A G D CF CG GHW R+C +
Sbjct: 100 KARPAHGSDHCFNCGMEGHWHRNCTA 125
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSLDGRTIRVNEA 81
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNAEDAKDAMEGMNGQSLDGRTIRVNEA 81
>gi|125550950|gb|EAY96659.1| hypothetical protein OsI_18573 [Oryza sativa Indica Group]
Length = 338
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 25 FGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY 84
+GF+ ++D R +DA ++ GR++ I V A RG GG Y
Sbjct: 53 YGFVEFSDPRDANDARLDLDGRKYDGSDIIVQFA-------------RGVERGLGGSRGY 99
Query: 85 GADRPGGQDDCFKCGRPGHWARDCPS 110
A G D CF CG GHW R+C +
Sbjct: 100 KARPAHGSDHCFNCGMEGHWHRNCTA 125
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++++RD+GR +GFGF+ + AI MHG+ R ++VN+A+PK
Sbjct: 33 QVIMDRDTGRSKGFGFVEMGSDQEAQAAISGMHGQVIEGRPLTVNEARPK 82
>gi|110638796|ref|YP_679005.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281477|gb|ABG59663.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 143
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+KI+ ++ +GR +GFGF+ D A AI E++G E R I VNK++ K G
Sbjct: 30 VKIISDKFTGRSKGFGFVEMPDDAAAQKAIDELNGAEVNGRTIVVNKSEEKKDG 83
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +RD+ R RGFGF+ +A + D+A++ M+ +F R+I V+ AQ
Sbjct: 33 VVKDRDTNRSRGFGFVRFATKAEADEAMQRMNNTQFDGRLIRVDHAQ 79
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSLDGRTIRVNEA 81
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNAEDAKDAMEGMNGQSLDGRTIRVNEA 81
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ +M ++++ RPRGFGFIT+ A+D +++ + G +++ V +A P+
Sbjct: 145 TDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQKTF-HDLGGKLVEVKRALPR 196
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+M ++ +GRPRGFGF+ +AD A+D A+++ H R + V +A
Sbjct: 37 VMRDKITGRPRGFGFVVFADPAAVDRALQDPH--TLDGRTVDVKRA 80
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+TY+ + + AI ++ ++ R I VN A P+
Sbjct: 32 DSVVMRDRDTGRSRGFGFVTYSSTQEAESAISGLNDQDLDGRRIKVNIANPR 83
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 87 RGSRGGAFGAHGRG 100
>gi|72012937|ref|XP_780865.1| PREDICTED: uncharacterized protein LOC575368 [Strongylocentrotus
purpuratus]
Length = 200
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 27/86 (31%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ-PKMGGEVSDHGYRGGGYSSGGRG 82
+ F+ Y D+R +DAI+ +G+E + I V A+ PK G E
Sbjct: 41 AYAFVDYVDKRDAEDAIKHENGKELNGQSIVVEWARGPKRGFE----------------- 83
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDC 108
D+C++CGR GH+ARDC
Sbjct: 84 ---------DDECYRCGRRGHFARDC 100
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 112/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GGYS S D +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDD-----GGYSMNFNMSSSRDPLPVK 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + ++ R RGFGFI +A + +DD + + + + + KA+PK
Sbjct: 143 DHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAGSKVEIKKAEPK 194
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R + +PRGFGFITY+D +D I + H + + + + PK
Sbjct: 53 DSVIMKDRHTSQPRGFGFITYSDPAVVDKVIEDNH--VINGKQVEIKRTIPK 102
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGFIT+ + AI ++G+E R I VN A +
Sbjct: 36 DAIVMQDRETGRSRGFGFITFKEEADAPGAIEALNGQELDGREIRVNYANSQ 87
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +I+++R++GR RGFGFITY AI+ + G++ R I VN A +
Sbjct: 70 DARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ I+ +R++GR RGF F+T++ +DAI ++ + R +SV +AQ K
Sbjct: 32 EVAIICDRETGRSRGFAFVTFSSEGEANDAIENLNESDVAGRNVSVRQAQSK 83
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+M ++ +GRPRGFGF+ YAD A+D A+ E H R + V +A
Sbjct: 37 VMRDKLTGRPRGFGFVVYADPAAVDAALLEPH--TLDGRTVDVKRA 80
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 3 QCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
Q D+ +M ++ + RPRGFGFIT+ A+D + + + G +++ V +A P+
Sbjct: 136 QTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTF-HDLGGKMVEVKRALPR 193
>gi|221112060|ref|XP_002166312.1| PREDICTED: uncharacterized protein LOC100212585 isoform 1 [Hydra
magnipapillata]
Length = 218
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GFGFI + D R DDA+REM G+ + V KA RG S G+
Sbjct: 37 PPGFGFIIFEDPRDADDAVREMDGKRVCGSKVRVEKA-------------RG---PSNGQ 80
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
G + C+ CG+ GH +R+C
Sbjct: 81 KGRQGGGGGRNEKCYNCGKVGHISREC 107
>gi|413924264|gb|AFW64196.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 136
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 24/89 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G K G +V S+ G
Sbjct: 9 KPPGFAFIDFDDRRDAEDAIRDLDG---------------KNGWKVE------LSRSTNG 47
Query: 81 RGSYGADRPGGQDD-CFKCGRPGHWARDC 108
RGS DR GG + C++CG GH+AR+C
Sbjct: 48 RGSR--DRHGGSESKCYECGETGHFAREC 74
>gi|413924259|gb|AFW64191.1| hypothetical protein ZEAMMB73_035767, partial [Zea mays]
Length = 191
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 24/89 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G+ G +V E+S S+ G
Sbjct: 64 KPPGFAFIDFDDRRDAEDAIRDLDGKN-GWKV------------ELS--------RSTNG 102
Query: 81 RGSYGADRPGGQDD-CFKCGRPGHWARDC 108
RGS DR GG + C++CG GH+AR+C
Sbjct: 103 RGSR--DRHGGSESKCYECGETGHFAREC 129
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +++L+R++GR RGFGFI++ A++ M G++ R I VN A K
Sbjct: 68 EARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEK 119
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
+ +GF+ + + +DAI+ + E+ MG ++ + + G+G
Sbjct: 54 KNYGFVHMDNEQDANDAIKALTNTEW-------------MGTRITVEMSKSKVRTQPGQG 100
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDCPS 110
S G +C++CG+ GHW+RDCP+
Sbjct: 101 SRG--------ECYRCGKMGHWSRDCPT 120
>gi|298707286|emb|CBJ25913.1| eukaryotic initiation factor 4B [Ectocarpus siliculosus]
Length = 568
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
QC ND+ ++ +R +G+ +GFG++T+ D++ + DA++ M R G R + V A+P
Sbjct: 161 FHQCGV--NDVYLVQDRTTGQAKGFGYVTFGDKQGLLDALK-MTQRNLGGRDVRVEVAKP 217
Query: 61 K 61
+
Sbjct: 218 Q 218
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
ND+ +M + +G PRGFGF+ + + + D A++E H R I V +A P+
Sbjct: 88 NDVILMRNKITGEPRGFGFVQFQESTSADAALKEEH--VIDGRTIDVKRAVPR 138
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 43.5 bits (101), Expect = 0.085, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G PRGFGF+TYAD +D I + H
Sbjct: 1949 DSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTH 1983
>gi|326506828|dbj|BAJ91455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 3 QCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
Q D+ +M ++ + RPRGFGFIT+ A+D + + + G +++ V +A P+
Sbjct: 37 QTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTF-HDLGGKMVEVKRALPR 94
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 109/286 (38%), Gaps = 62/286 (21%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA----------- 58
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 122 EVLLMKDRETNKSRGFAFVTFESSADAKDAARDMNGKSLDGKAIKVEQAPKPTFESGRRG 181
Query: 59 --------------------------QPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
P GG + GY S RG +
Sbjct: 182 PPPPPRSTGPPRGLRGGRGGSRGTRGPPSRGGHMDHGGYSMNFNMSSSRGPLPVKKGPPP 241
Query: 93 DDCFKCGRPGHWARDCPS-AVGGRGGAGG-SFSSRSRFGGVGV-RGDYLGGGRDRYIDDR 149
+ R PS V R G GG + SR R G+ R + L RD Y+ R
Sbjct: 242 RSGGPPPK-----RSAPSGPVRSRSGMGGRAPVSRGRDSSGGLPRREPLPSPRDVYLSPR 296
Query: 150 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKER 206
D R +D Y S+D R D PP D D YG S D YP GY
Sbjct: 297 DD--RCSTKDSYSSRDYPSSCDTR---DDAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRD 350
Query: 207 GYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPS 251
GY RD R SD + SGG R+ Y SR+AP P+RG PS
Sbjct: 351 GYGRD---RDYSD-HPSGGSYRESSESYGNSRSAP---PTRGPPPS 389
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D ++L+R+SG RGFGF+TY ++A++ MH +E R+I V+ A
Sbjct: 64 DAVVVLDRESGLSRGFGFVTYDSIEDANNAMQCMHNKELDGRIIGVSPA 112
>gi|115449145|ref|NP_001048352.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|75324004|sp|Q6K4N0.1|RSZ21_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=Os-RSZ21; Short=Os-RSZp21
gi|47497051|dbj|BAD19103.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|47497773|dbj|BAD19873.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113537883|dbj|BAF10266.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|215706489|dbj|BAG93345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706955|dbj|BAG93415.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191722|gb|EEC74149.1| hypothetical protein OsI_09229 [Oryza sativa Indica Group]
gi|222623815|gb|EEE57947.1| hypothetical protein OsJ_08668 [Oryza sativa Japonica Group]
Length = 185
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 22/93 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + D+R +DA+R++ G+ +S N + S GG
Sbjct: 36 KPPGFAFIDFDDKRDAEDALRDLDGKNGWRVELSRNSS------------------SRGG 77
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVG 113
R +G G + C++CG GH+AR+C +G
Sbjct: 78 RDRHG----GSEMKCYECGETGHFARECRLRIG 106
>gi|157412351|ref|YP_001483217.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9215]
gi|157386926|gb|ABV49631.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9215]
Length = 214
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF FI D AI + G E R + +NKA+P+
Sbjct: 29 NCSLPLERDTGRKRGFAFIEMGDEAIEATAIDGLQGTELMGRPLRINKAEPR 80
>gi|116620134|ref|YP_822290.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223296|gb|ABJ82005.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 132
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
N +IM +R++GR RGF F+ + D AI ++G R ++VN+A+PK
Sbjct: 29 NSARIMTDRETGRSRGFAFVEMENEGEADQAISALNGYTLDGRALNVNEARPK 81
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +++++RD+GR RGFGFI++ A++ M G++ R I VN A K
Sbjct: 68 EARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEK 119
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++ +H D+ +I+++RD+G+ +G+GFITY A+ M G++ R++ V+
Sbjct: 47 LKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVST 106
Query: 58 AQ 59
A
Sbjct: 107 AN 108
>gi|87301157|ref|ZP_01083998.1| RNA-binding protein RbpD [Synechococcus sp. WH 5701]
gi|87284125|gb|EAQ76078.1| RNA-binding protein RbpD [Synechococcus sp. WH 5701]
Length = 113
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
L+R++GR RGF F+ A+ AI ++ E+ +R+I VNKA+P
Sbjct: 34 LDRETGRKRGFAFVELANDAEEQKAIDDLQNVEWMNRMIRVNKAEP 79
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++++R++GRPRGFGF+ Y + DA+ M+G+ R I VN+A
Sbjct: 36 VIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSLDGRTIRVNEA 81
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGF+TYAD +D I++ H
Sbjct: 69 TDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNH 104
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IM + +GR RGFGF+TY +D + + + E + + KA+PK V+
Sbjct: 160 QIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSK 219
Query: 72 RGG 74
R G
Sbjct: 220 RFG 222
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +M +R++ + RGF F+TY + DA REM+G+ + I V +A
Sbjct: 35 SEVLLMKDRETNKSRGFAFVTYENPSDAKDAAREMNGKPLDGKPIKVEQAT 85
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+M ++ +GRPRGFGF+ YAD ++D A++E H R + V +A
Sbjct: 37 VMRDKLTGRPRGFGFVVYADPASVDAALQEPH--TLDGRTVDVKRA 80
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 3 QCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
Q D+ +M ++ + RPRGFGFIT+ A+D + + + G +++ V +A P+
Sbjct: 139 QTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTF-HDLGGKMVEVKRALPR 196
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ ++M + +SG+ RG+GF+++ D+ + AI M+G G R I VN A K
Sbjct: 140 SEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
IM ++ +GRPRGFGF+ +AD +D ++E H R + +A + S G
Sbjct: 37 IMRDKTTGRPRGFGFVVFADPSVLDAVLQEKH--TIDGRTVEAKRALSREEQHTSRPGNS 94
Query: 73 GGGYSSGGRG 82
G SS G G
Sbjct: 95 NTGRSSSGMG 104
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
H D+ +M ++++ RPRGFGFI++ A+D + + + +++ V +A PK
Sbjct: 135 HVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTF-HDLNGKLVEVKRALPK 188
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +I+++R++GR RGFGF+TY AI+ + G++ R + VN A +
Sbjct: 68 EARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATER 119
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R + +PRGFGFITYAD +D I + H
Sbjct: 72 TDSVIMKDRKTAQPRGFGFITYADPSVVDKVIEDTH 107
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGFIT+ A+DD + + +F + + KA+PK
Sbjct: 161 DNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAGTQVEIKKAEPK 212
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44
D IM +R +G+PRGFGF+TYAD +D I++ H
Sbjct: 69 TDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNH 104
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IM + +GR RGFGF+TY +D + + + E + + KA+PK V+
Sbjct: 160 QIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSK 219
Query: 72 RGG 74
R G
Sbjct: 220 RFG 222
>gi|255080496|ref|XP_002503828.1| predicted protein [Micromonas sp. RCC299]
gi|226519095|gb|ACO65086.1| predicted protein [Micromonas sp. RCC299]
Length = 461
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 5 LTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
L H D K++ +R++GR RGFGF+T+AD A A++ MHG + R ++ ++
Sbjct: 27 LGHITDCKVITDRETGRSRGFGFVTFADASAAAAAVQTMHGADIMGRACRIDFSE 81
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++R SGR RGFGF+++ D DAI +M G+E R I V+ A
Sbjct: 45 VTVDRMSGRSRGFGFVSFYDPEDAQDAIDQMTGKELCGRSIRVSHA 90
>gi|268574558|ref|XP_002642258.1| C. briggsae CBR-DRR-2 protein [Caenorhabditis briggsae]
Length = 226
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 36/50 (72%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ ++ +R++G+ +GFG++T++ + ++ AI ++G +F R + VN+AQ
Sbjct: 40 EIHLVHDRETGQCKGFGYVTFSTEQQLNTAISSLNGADFEKRKLKVNRAQ 89
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++M + S PRGF F+T+ + AI M+G EF R I+V+KA+
Sbjct: 106 QVMYDPHSREPRGFAFVTFVKAEDAEAAITAMNGTEFLGRKITVDKAR 153
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R +G PRGFGF+TYAD +D I + H + + + + PK
Sbjct: 33 TDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHI--INGKQVEIKRTIPK 83
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D +M +R++GR RGFGF+T+A + D AI ++ +E R I VN A
Sbjct: 30 TDYIVMKDRETGRSRGFGFVTFATQGEADAAIAALNEQELDGRRIRVNMA 79
>gi|401888930|gb|EJT52874.1| hypothetical protein A1Q1_00779 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697640|gb|EKD00896.1| hypothetical protein A1Q2_04769 [Trichosporon asahii var. asahii
CBS 8904]
Length = 141
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
M +R++GR RGFGF+TY ++ + AI M+ +E R + VN A K
Sbjct: 1 MKDRETGRSRGFGFVTYGNQAEAEAAINAMNEQELDGRRVRVNMANSK 48
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 105/247 (42%), Gaps = 33/247 (13%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A K E
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT-KPSFESGRR 94
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFG 129
G S G R G R GH A P + G R +G
Sbjct: 95 GPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMA---PVSRG-----------RDSYG 140
Query: 130 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 189
G R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 141 GPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRGYTYRD 194
Query: 190 RYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPS 245
YG S D YP GY GY RD R SD + SGG RD Y SR+AP P+
Sbjct: 195 -YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PT 246
Query: 246 RGDRPSF 252
RG PS+
Sbjct: 247 RGPPPSY 253
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM ++ + +PRGFGFITY++ +D + ++H EF + + + + PK
Sbjct: 51 DSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDIH--EFNGKQVEIKRTIPK 100
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGFI ++ + +DD + + + + + KA+PK
Sbjct: 139 DHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKVEIKKAEPK 190
>gi|380021805|ref|XP_003694747.1| PREDICTED: RNA-binding protein lark-like [Apis florea]
Length = 351
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++GR + + V + ++
Sbjct: 122 RNYGFVHLEATGDVNDAIKELNGRMVDGQAMKVQISTSRV-------------------- 161
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 140
RPG D C++CGR GHW+++CP GG GG R R G R Y
Sbjct: 162 ---RQRPGMGDPEQCYRCGRGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPP 213
Query: 141 GRDRYIDDRYD-GGRYGDRDRYDSKDSKYGSRDRY 174
++ DR GGR+GD + Y + +RD Y
Sbjct: 214 PPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLY 248
>gi|357150077|ref|XP_003575333.1| PREDICTED: uncharacterized protein LOC100846226 [Brachypodium
distachyon]
Length = 231
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 22/89 (24%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + + R DAIRE+ G+ G RV E+S S G
Sbjct: 36 KPPGFAFIDFDESRDAKDAIRELDGKN-GWRV------------ELSTK-------SGSG 75
Query: 81 RGSYGADRPGGQD-DCFKCGRPGHWARDC 108
RG +RPGG D C++CG GH+AR+C
Sbjct: 76 RG-RERERPGGSDMKCYECGESGHFAREC 103
>gi|448878397|gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens subsp. patens]
Length = 210
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DDAIR ++G+ +G+R S G
Sbjct: 36 KPPGFAFIEFEDRRDADDAIRALNGK----------------------NGWRVELSRSSG 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G R G C++CG PGH+AR+C
Sbjct: 74 GGGGPRGRGGDDMKCYECGEPGHFAREC 101
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T++ + +I++M+ + R I VN A K
Sbjct: 32 DSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQMNEQPLDGRNIRVNMANAK 83
>gi|296121841|ref|YP_003629619.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
gi|296014181|gb|ADG67420.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
Length = 146
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R++GR RGFGF+ +D + A+ M+G EF R ++VN+A+P+
Sbjct: 33 QVVSDRETGRSRGFGFVEMSD--GAERAVEAMNGAEFQGRTLTVNEARPR 80
>gi|328786023|ref|XP_623841.3| PREDICTED: RNA-binding protein lark-like isoform 1 [Apis mellifera]
Length = 356
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++GR + + V + ++
Sbjct: 122 RNYGFVHLEATGDVNDAIKELNGRMVDGQAMKVQISTSRV-------------------- 161
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 140
RPG D C++CGR GHW+++CP GG GG R R G R Y
Sbjct: 162 ---RQRPGMGDPEQCYRCGRGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPP 213
Query: 141 GRDRYIDDRYD-GGRYGDRDRYDSKDSKYGSRDRY 174
++ DR GGR+GD + Y + +RD Y
Sbjct: 214 PPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLY 248
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ + +R++G+PRGF F+T +A + AI +++G R + VN+AQ +
Sbjct: 31 EIAMPTDRETGQPRGFAFVTMGSAQAANSAISQLNGAVLDGRALKVNEAQER 82
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+ +R++GR RGFGF+T+A + A+ M G++ R I VN AQ +
Sbjct: 69 KIINDRETGRSRGFGFVTFASPDEANAAVEAMDGKDLQGRSIRVNIAQER 118
>gi|427702215|ref|YP_007045437.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427345383|gb|AFY28096.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 140
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
L+R++GR RGF FI AD + AI ++ E+ R+I VNKA P+
Sbjct: 34 LDRETGRKRGFAFIELADDASEQKAIDDLQDVEWMGRMIRVNKATPR 80
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K++ +R++G+ RGFGF+ AI E+ E+ +VISVN A+P+
Sbjct: 31 KVITDRETGKSRGFGFVEMPTEAEAKKAIEELDQAEYDGKVISVNVAKPR 80
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP +RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAPL---TRGPPPSY 304
>gi|50543092|ref|XP_499712.1| YALI0A02981p [Yarrowia lipolytica]
gi|49645577|emb|CAG83635.1| YALI0A02981p [Yarrowia lipolytica CLIB122]
Length = 419
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+IM++ SG RGFGF+ AD D+A+ +++G E + +++ KA+
Sbjct: 211 QIMMDPHSGESRGFGFVMMADVTGADEALAKLNGHELAGKTLAIEKAK 258
>gi|284022113|sp|Q925G0.2|RBM3_RAT RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
Length = 155
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + D +R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGRG 82
G RGG + + GRG
Sbjct: 87 RGTRGGAFGAHGRG 100
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDHGYRG-GGYSSGGRGSYGADRPG 90
A G+ SD+ RG S+GGRG + D G
Sbjct: 82 A-----GKSSDNRSRGYXAASAGGRGFFRGDESG 110
>gi|168048201|ref|XP_001776556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672147|gb|EDQ58689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DDAIR ++G+ +G+R S G
Sbjct: 36 KPPGFAFIEFEDRRDADDAIRALNGK----------------------NGWRVELSRSSG 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G R G C++CG PGH+AR+C
Sbjct: 74 GGGGPRGRGGDDMKCYECGEPGHFAREC 101
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IM + +GR RGFGF+T+ ++D + E GD+ + + +A+PK G D+ +
Sbjct: 187 QIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGR--DNSF 244
Query: 72 RGGGYS 77
R G S
Sbjct: 245 RSYGAS 250
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R +G PRGFGF+T+AD + + E H + DR + + + P+
Sbjct: 94 DSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVID--DRKVDLKRTLPR 143
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +M +R++ + RGF F+TY + DA REM+G+ + I V +A
Sbjct: 35 SEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNGKPLDGKPIKVEQAT 85
>gi|332031363|gb|EGI70876.1| RNA-binding protein lark [Acromyrmex echinatior]
Length = 355
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++G+ + QP M ++S R
Sbjct: 122 RNYGFVHLEATGDVNDAIKELNGQ--------IVDGQP-MKVQISTSRVR---------- 162
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 140
RPG D C++CGR GHW+++CP GG GG R R G R Y
Sbjct: 163 ----QRPGMGDPEQCYRCGRGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPP 213
Query: 141 GRDRYIDDRYD-GGRYGDRDRYDSKDSKYGSRDRY 174
++ DR GGR+GD + Y + +RD Y
Sbjct: 214 PPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLY 248
>gi|320103893|ref|YP_004179484.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
gi|319751175|gb|ADV62935.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
Length = 104
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IM++R++ R RGFGFI R +AI ++G++F R ++VN+A+P+
Sbjct: 31 QIMIDRETNRSRGFGFIEM--RTGAQEAIEALNGQDFHGRSLTVNEARPR 78
>gi|37522099|ref|NP_925476.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35213098|dbj|BAC90471.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 123
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+KI +R++GRPRGF F+ AD I + G + +R I VNKA+P+
Sbjct: 30 VKIPTDRETGRPRGFAFVEMADEEEA-KVIESLDGATWDNRQIRVNKAEPR 79
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+ +++++RD+GR RGFGF+++ A+ + G++ R I VN A K+
Sbjct: 68 EARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL 120
>gi|410098203|ref|ZP_11293182.1| hypothetical protein HMPREF1076_02360 [Parabacteroides
goldsteinii CL02T12C30]
gi|409222476|gb|EKN15418.1| hypothetical protein HMPREF1076_02360 [Parabacteroides
goldsteinii CL02T12C30]
Length = 126
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R++GR RGFGF+ D AI E++ + ++VI+V +A+P+
Sbjct: 31 RVITDRETGRSRGFGFVELKDDNLAKKAIEELNQATYDEKVINVTEARPR 80
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++++ +R+SGR +GFG++ Y A A+ EM G++ R I+V+ + P
Sbjct: 331 VRVVTDRESGRSKGFGYVEYTTNEAAKKALEEMKGKDIDGRTINVDFSAP 380
>gi|332531199|ref|ZP_08407112.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332039306|gb|EGI75719.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 131
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
K+M+ERD+GR +GFGF+ AI ++G+ R + VN+A+P
Sbjct: 33 KVMMERDTGRSKGFGFVEMGSDAEAQAAINGLNGQPLSGRNVVVNEARP 81
>gi|297741517|emb|CBI32649.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 25 FGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
F F+ ++D R DDA ++GR+F G R+I GG Y G G
Sbjct: 5 FAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGP------- 57
Query: 84 YGADRPGGQDDCFKCGRPGHWARDC 108
P G CF CG GHWARDC
Sbjct: 58 -----PPGSGRCFNCGIDGHWARDC 77
>gi|322797564|gb|EFZ19608.1| hypothetical protein SINV_13630 [Solenopsis invicta]
Length = 324
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++G+ + QP M ++S R
Sbjct: 122 RNYGFVHLEATGDVNDAIKELNGQ--------IVDGQP-MKVQISTSRVR---------- 162
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 140
RPG D C++CGR GHW+++CP GG GG R R G R Y
Sbjct: 163 ----QRPGMGDPEQCYRCGRGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPP 213
Query: 141 GRDRYIDDRYD-GGRYGDRDRYDSKDSKYGSRDRY 174
++ DR GGR+GD + Y + +RD Y
Sbjct: 214 PPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLY 248
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ YA D A++ M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYAQETEADAAMQAMNNEEFDGRRIRVDKA 78
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D +I+++R++GR RGFGFITY++ A++ + G++ R + V A
Sbjct: 70 DARIIMDRETGRHRGFGFITYSNVDEASRALQALDGQDLDGRRVEVKFA 118
>gi|307195687|gb|EFN77529.1| RNA-binding protein lark [Harpegnathos saltator]
Length = 325
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++G+ + QP M ++S R
Sbjct: 122 RNYGFVHLEATGDVNDAIKELNGQ--------IVDGQP-MKVQISTSRVR---------- 162
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 140
RPG D C++CGR GHW+++CP GG GG R R G R Y
Sbjct: 163 ----QRPGMGDPEQCYRCGRGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPP 213
Query: 141 GRDRYIDDRYD-GGRYGDRDRYDSKDSKYGSRDRY 174
++ DR GGR+GD + Y + +RD Y
Sbjct: 214 PPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLY 248
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149817244|gb|EDM76721.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 189
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +++L+R++GR RGFGF+TY D A+ + G+E R I V++AQ K
Sbjct: 26 EDARVILDRETGRSRGFGFVTYVDEEGATKALG-LDGQEVDGRRIRVDRAQEK 77
>gi|448878401|gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens subsp. patens]
Length = 209
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DDAIR ++G+ +G+R S G
Sbjct: 36 KPPGFAFIEFEDRRDADDAIRALNGK----------------------NGWRVELSRSSG 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G R G C++CG PGH+AR+C
Sbjct: 74 GGGGPRGRGGDDMKCYECGEPGHFAREC 101
>gi|168061025|ref|XP_001782492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666045|gb|EDQ52711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DDAIR ++G+ +G+R S G
Sbjct: 36 KPPGFAFIEFEDRRDADDAIRALNGK----------------------NGWRVELSRSSG 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G R G C++CG PGH+AR+C
Sbjct: 74 GGGGPRGRGGDDMKCYECGEPGHFAREC 101
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP +RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAPL---TRGPPPSY 304
>gi|413924263|gb|AFW64195.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 178
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 24/89 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G K G +V S+ G
Sbjct: 51 KPPGFAFIDFDDRRDAEDAIRDLDG---------------KNGWKVE------LSRSTNG 89
Query: 81 RGSYGADRPGGQDD-CFKCGRPGHWARDC 108
RGS DR GG + C++CG GH+AR+C
Sbjct: 90 RGS--RDRHGGSESKCYECGETGHFAREC 116
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T++ + + AI +H ++ R I VN A +
Sbjct: 31 DSIVMRDRETGRSRGFGFVTFSSEQEAEAAINSLHEQDLDGRRIKVNLANAR 82
>gi|320102269|ref|YP_004177860.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
gi|319749551|gb|ADV61311.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
Length = 129
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+++R++ R RGFGFI + D+AI +HG+++ R ++VN+A+P+
Sbjct: 34 QIIIDRETNRSRGFGFIEMSS--GADEAINALHGQDYRGRNLTVNEARPR 81
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
I+++RD+GR RGFGF+TY AI+ M G++ R + VN A +
Sbjct: 71 IIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66
++ ++R++G+ RGFG++T+A A+D AI + +G+E R ++++K+ K G V
Sbjct: 74 RVQMDRNTGKSRGFGYVTFATVEAVDAAIAQ-NGKEIDGRAVNIDKSIEKDKGAV 127
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 107/264 (40%), Gaps = 33/264 (12%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT----KPTFET 91
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP-----------GHWARDCPS-AVGGRGG 117
G RG RG R G + P R PS V G
Sbjct: 92 GRRGQLPPPRSRGPPRGLRGGRGGSSSRGPLPMKRGPPPRSGGPPPKRPTPSGPVRSSSG 151
Query: 118 AGG-SFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVS 176
GG + SR R R + L RD Y+ R DG Y +DRYD S+ R
Sbjct: 152 MGGRAPLSRGRDNYGPPRREPLPSRRDVYLSPRDDG--YSTKDRYDHYSSRDYPNSRDTR 209
Query: 177 DRYPPAGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDR----YASGGPARD 229
D PP D D YG S D YP GY +RD G DR + SGG RD
Sbjct: 210 DYAPPPRDYAYRD-YGHSSSRDEYPSRGYSYSSYNDRD--GYGGRDRDYSDHPSGGTYRD 266
Query: 230 DGRGY-RSRAAPYDRPSRGDRPSF 252
Y SR+AP P+RG PS+
Sbjct: 267 SYESYGNSRSAP---PARGPPPSY 287
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
++ +RD+ R RGFGF+ +A + A+ EM+ +EF R I V+KA + G +D G+
Sbjct: 33 VVKDRDTNRSRGFGFVRFASEGEAEAAMNEMNNQEFDGRTIRVDKAADRPSGPRND-GFN 91
Query: 73 GGGYS 77
YS
Sbjct: 92 RSNYS 96
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREF-GDR-VISVNKA 58
T + DL+ + R D R + F+ ++D R DDA + GR+ G R ++ K
Sbjct: 22 TRSRDLERVFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYNLDGRDVDGSRLIVEFAKG 81
Query: 59 QPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
P+ E R Y GRG P G CF CG GHWARDC
Sbjct: 82 VPRGSREGGGGRDRDREY--MGRGP-----PPGSGRCFNCGIDGHWARDC 124
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP +RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAPL---TRGPPPSY 304
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+ ++R +GR RGFG++ ++ A++ AI E++G+E R ++V+K+ P
Sbjct: 364 VQMDRSTGRSRGFGYVHFSTSEAVEKAI-ELNGKEIDGRAVNVDKSNP 410
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++++ +R+SGRP+GFG++ ++D A M G E R + ++ +QP
Sbjct: 461 NVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVRLDFSQP 511
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ YA+ ++AI M G+EF R + V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYANDADAENAIANMDGQEFDGRRVRVDKA 78
>gi|350296775|gb|EGZ77752.1| RNA-binding domain-containing protein, partial [Neurospora
tetrasperma FGSC 2509]
Length = 175
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 4 CLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
CL + + ++ +RD+GR RGFGF+ Y + ++AI M G+EF R + V+KA
Sbjct: 31 CLFRSTQV-VVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQEFDGRRVRVDKA 84
>gi|307187784|gb|EFN72750.1| RNA-binding protein lark [Camponotus floridanus]
Length = 331
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++G+ + QP M ++S R
Sbjct: 122 RNYGFVHLEATGDVNDAIKELNGQ--------IVDGQP-MKVQISTSRVR---------- 162
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 140
RPG D C++CGR GHW+++CP GG GG R R G R Y
Sbjct: 163 ----QRPGMGDPEQCYRCGRGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPP 213
Query: 141 GRDRYIDDRYD-GGRYGDRDRYDSKDSKYGSRDRY 174
++ DR GGR+GD + Y + +RD Y
Sbjct: 214 PPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLY 248
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 LPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFTLSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS-AVGGRGGAGG-SFSSRSRFG-GVGVRGDYLGGGRDRYIDDR 149
R PS V G GG + SR R G G R + L RD Y+ R
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDGYGGPPRREPLPSRRDVYLSPR 210
Query: 150 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKER 206
DG Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 211 DDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRD 264
Query: 207 GYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY R+ R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 GYGRE---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
Length = 136
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++++I+ +RD+G RGFGF+T+ DA+ M+GR R I V++A+ K
Sbjct: 32 SEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSMNGRSLEGRQIRVDRAEKK 84
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
++ +RD+ R RGFGF+ +A D A+ M +EF R+I V+KA + G+ S+
Sbjct: 33 VVKDRDTNRSRGFGFVRFASEAEADAAMNAMSNQEFDGRMIRVDKAADRQPGQRSE 88
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 LPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFTMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS-AVGGRGGAGG-SFSSRSRFG-GVGVRGDYLGGGRDRYIDDR 149
R PS V G GG + SR R G G R + L RD Y+ R
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGLGGRAPVSRGRDGYGGPPRREPLPSRRDVYLSPR 210
Query: 150 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKER 206
DG Y +D Y S++ SRD D PP D D YG S D YP GY
Sbjct: 211 DDG--YSTKDSYSSREYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRD 264
Query: 207 GYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 GYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 21/86 (24%)
Query: 24 GFGFITYADRRAMDDAIREMHGREFGD-RVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
+ FI Y + A+REM+G+ F + ++V ++ P GG G
Sbjct: 128 NYAFIDYENHEDAVAALREMNGKTFVNGEELAVEQSVP------------GGKKRKSG-- 173
Query: 83 SYGADRPGGQDDCFKCGRPGHWARDC 108
P +D C+ C +PGHWA +C
Sbjct: 174 ------PKREDVCYNCQKPGHWANEC 193
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+ R RGFGF+ ++ D A+ M+ +EF RVI V+KA
Sbjct: 35 VVKDRDTNRSRGFGFVRFSSEAEADAALNAMNNQEFDGRVIRVDKA 80
>gi|357124087|ref|XP_003563738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 2 [Brachypodium distachyon]
Length = 354
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+IM++ +GR RGFGF+T+ A++ + E + G + + + +A+PK
Sbjct: 146 QIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPK 195
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ ++ +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPSAV----GGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRR-EPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP GYG
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYGDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP +RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAPL---TRGPPPSY 304
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ + A++ + E + + + + KA+PK G
Sbjct: 210 QIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKKPG 262
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+D IM ++ + PRGFGF+T++D +D +++ H R + V + P+
Sbjct: 118 SDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQDEH--TIDGRTVEVKRTVPR 168
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
Length = 122
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ +R+SGR RGFGF+ + + AI E++G++F R ++VN+A+ +
Sbjct: 34 VVEDRESGRSRGFGFVEMSTKEEGQKAIAELNGKDFNGRPLTVNEAKQR 82
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 110/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R DG Y +D Y S+D SRD D PP D D YG S D YP Y
Sbjct: 210 RDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSREYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
+IM + +GR RGFGF+T+ ++D + E GD+ + + +A+PK G D+ +
Sbjct: 210 QIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGR--DNSF 267
Query: 72 RGGGYS 77
R G S
Sbjct: 268 RSYGAS 273
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R +G PRGFGF+T+AD + + E H + DR + + + P+
Sbjct: 117 DSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVID--DRKVDLKRTLPR 166
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ + A++ + E + + + + KA+PK G
Sbjct: 147 QIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKKPG 199
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+D IM ++ + PRGFGF+T++D +D +++ H R + V + P+
Sbjct: 55 SDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQDEH--TIDGRTVEVKRTVPR 105
>gi|448878399|gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transcript II
[Physcomitrella patens subsp. patens]
Length = 137
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DDAIR ++G+ +G+R S G
Sbjct: 36 KPPGFAFIEFEDRRDADDAIRALNGK----------------------NGWRVELSRSSG 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G R G C++CG PGH+AR+C
Sbjct: 74 GGGGPRGRGGDDMKCYECGEPGHFAREC 101
>gi|403411649|emb|CCL98349.1| predicted protein [Fibroporia radiculosa]
Length = 168
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 6 THNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ D +M +RD+GR RGFGF+TY+ AI ++ +E R I VN A +
Sbjct: 38 VSSEDSIVMRDRDTGRSRGFGFVTYSSGMEAQSAITNLNEQELDGRRIKVNLANAR 93
>gi|255587593|ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 184
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ F+ + DRR DAIR + G+ G RV E+S H +GGG GG
Sbjct: 36 RPPGYAFVEFDDRRDAVDAIRALDGKN-GWRV------------ELS-HNSKGGGGRGGG 81
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
G G R G C++CG PGH+AR+C +G RG G
Sbjct: 82 SGGGGRGRGGEDMKCYECGEPGHFARECRLRIGSRGLGSG 121
>gi|452002034|gb|EMD94493.1| hypothetical protein COCHEDRAFT_1131167 [Cochliobolus
heterostrophus C5]
Length = 125
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ YA D A++ M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYAQETEADAAMQAMNNEEFDGRRIRVDKA 78
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ I+ +R++GR RGF F+T++ +DAI ++ + R +SV +AQ K
Sbjct: 32 EVAIICDRETGRSRGFAFVTFSSEGEANDAIENLNESDVRGRNVSVRQAQSK 83
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQ 59
T + DL+ + R D + F+ + D R DDA + GR+ G R+I
Sbjct: 22 TRSRDLERVFSRYGSVRDVDMKHDYAFVEFRDPRDADDARYNLDGRDIDGSRLIV----- 76
Query: 60 PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
E + RG S R G P G CF CG GHWARDC
Sbjct: 77 -----EFAKGVPRGSRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDC 120
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IML+ +GR RGFGF+T+ + A++ + E + + + + KA+PK G
Sbjct: 88 QIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKKPG 140
>gi|405122849|gb|AFR97615.1| DNA topoisomerase type I [Cryptococcus neoformans var. grubii H99]
Length = 959
Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 94 DCFKCGRPGHWARDCPSAVGGRGGA 118
+C+KCG GHWA CP+ VGGR G
Sbjct: 890 ECYKCGEAGHWANACPNNVGGREGG 914
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T++ AI ++ +EF R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTFSSETEATGAISALNEQEFEGRRIKVNFANAR 82
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K+M++R++GR +GFGF+ AI M+G+ R I VN+A+P+
Sbjct: 33 KVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQPLEGRAIVVNEARPR 82
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGGYSSGGR 81
G RGG + + GR
Sbjct: 87 RGTRGGAFGARGR 99
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ +RD+GR RGFGF+ Y +AI M+ EF R I V+KA
Sbjct: 29 EEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIAAMNNVEFDGRTIRVDKA 78
>gi|162455979|ref|YP_001618346.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166561|emb|CAN97866.1| putative RNA-binding protein [Sorangium cellulosum So ce56]
Length = 123
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++M +R +G+ RGFGF+ +D +A AI +HG++ R ++VN+A+ +
Sbjct: 33 IQLMTDRMTGQSRGFGFVEVSDAQA-QAAINALHGKDLDGRTLTVNEARER 82
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
H + +M ++++ + RGF F+T+ A DA R+M+G+ + I V +A
Sbjct: 32 HIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARDMNGKALDGKSIKVEQAN 84
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D+ I L+R +G RGFGF+ + +RR +DAIR+M +EF I+V A
Sbjct: 38 DVFIPLDRYTGVSRGFGFVRFYERRDAEDAIRDMDNKEFQGCRITVAAAM 87
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF ++ + D R DA+R + G+ DR + V+ + + G + G Y G
Sbjct: 47 PPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRG--PAPYDRYGG 104
Query: 82 GSYGADRPGGQDD--CFKCGRPGHWARDCP 109
G G +R G + D C+ C GH+ARDCP
Sbjct: 105 GGGGGNR-GFRSDMRCYNCSETGHFARDCP 133
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +I+ +R++GR RGFGFI++ AI M G++ R++ VN A +
Sbjct: 68 EARIIHDRETGRSRGFGFISFTSNEEAAAAITGMDGKDLHGRLVHVNYATER 119
>gi|430744003|ref|YP_007203132.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430015723|gb|AGA27437.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 143
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+++RD+ R +GFGF+ AD D+A ++G++F R ++VN+A+P+
Sbjct: 33 QIIIDRDTNRSKGFGFVEMAD--GADEAANALNGQDFRGRNLTVNEARPR 80
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
D +M++RDS R +GFGF+T+ D+ + + M G + I V AQP+ G SD
Sbjct: 110 DATVMVDRDSSRSKGFGFVTFDDQSGAER-LFGMPGLAIDGKTIEVKMAQPRAGLN-SDR 167
Query: 70 GYRGGGYSS 78
GGYS+
Sbjct: 168 SQNRGGYSN 176
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ K++++R+SGR RGFGF+T+ AI M G++ R++ V+ A
Sbjct: 58 TEAKVIMDRESGRSRGFGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAH 108
>gi|296471214|tpg|DAA13329.1| TPA: RNA binding motif protein, X-linked isoform 2 [Bos taurus]
Length = 352
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 108/284 (38%), Gaps = 64/284 (22%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM---------- 62
M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 1 MKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPP 60
Query: 63 --------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCF 96
GG + D GY S RG +
Sbjct: 61 PRSRGPPRGLRGGRGGSGGTRGPPSHGGHMDDGGYSMNFNMSSSRGPLPV-----KRGPP 115
Query: 97 KCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDG 152
R PS + G GG R +GG R + L RD Y+ R DG
Sbjct: 116 PRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDDG 174
Query: 153 GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKERGYE 209
Y +D Y S+D SRD D PP D D YG S D YP GY GY
Sbjct: 175 --YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRDGYG 228
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 229 RD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 265
>gi|198422045|ref|XP_002120923.1| PREDICTED: similar to eukaryotic translation initiation factor 4B
[Ciona intestinalis]
Length = 497
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 29/182 (15%)
Query: 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+Q+ + L+ ++GR RG+G++ + D++++ A+ +M+ RVI V+
Sbjct: 112 LQEFFKDIPMTNVRLQEENGRFRGYGYVQFPDKQSLIQAL-QMNDETLQKRVIRVD---- 166
Query: 61 KMGGEVSDHGYRGGGYSSGGRGS-YGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
++D+ + G GRG YG+ G D + G+W R + GG G
Sbjct: 167 -----IADNQNKEG----KGRGDRYGSL--SGDPDRLE----GNWRRTSNDHLN--GGPG 209
Query: 120 GSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRY 179
+ SR+GG G + G R+ DRY GGR G RY+S S+ G ++++ R
Sbjct: 210 SNRGEDSRWGGRGYEQNDRGS---RFGRDRYGGGRDG---RYESSFSRGGESEQWMQRRE 263
Query: 180 PP 181
PP
Sbjct: 264 PP 265
>gi|4544401|gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVIS 54
D KI+++R++GR +GF F+T+ D +M AI M+G+E R I+
Sbjct: 72 DSKIIIDRETGRSKGFRFVTFKDEDSMRTAIDRMNGQELDGRNIT 116
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T++ D+AI ++ ++ R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTFSSSAEADNAIASLNEQDLDGRRIRVNLANAR 82
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ ++R +G+ +GFG++ +AD + A+ M+GRE R ++++ A P+
Sbjct: 302 RVQMDRQTGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPR 351
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
++++ +RDSG+P+GFG++ +AD A+ E+ G +F R I ++ + P+
Sbjct: 400 NVRLPTDRDSGQPKGFGYVEFADVETASKALNELGGTDFEGRNIRLDFSAPRT 452
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 110/288 (38%), Gaps = 64/288 (22%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 150
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 151 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSP 209
Query: 149 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKE 205
R G Y +D Y S+D SRD D PP D D YG S D YP GY
Sbjct: 210 RDVG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDR 263
Query: 206 RGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 264 DGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T+ + A+ +M E R I VN A K
Sbjct: 30 TDSIVMRDRETGRSRGFGFVTFTTAEEANAAMGQMDQTELDGRTIRVNVANAK 82
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR 72
++ +R + R RGFGF+ +A D A+ M+ +EF RVI V+KA + + S+ G++
Sbjct: 30 VVKDRATQRSRGFGFVRFATDAEADAALGAMNNQEFDGRVIRVDKAFDR--PQRSEGGFQ 87
Query: 73 G-GGYSSGGRGSY 84
G GGY+S + SY
Sbjct: 88 GRGGYNSQPQSSY 100
>gi|332525684|ref|ZP_08401833.1| RNA-binding region RNP-1 [Rubrivivax benzoatilyticus JA2]
gi|332109243|gb|EGJ10166.1| RNA-binding region RNP-1 [Rubrivivax benzoatilyticus JA2]
Length = 145
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K+M++R++GR +GFGF+ AI M+G+ R + VN+A+P+
Sbjct: 20 KVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQSLEGRAVVVNEARPR 69
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+IM++ +GR RGFGF+T+ A++ + E + G + + + +A+PK G
Sbjct: 202 QIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPKKPG 254
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D+ ++ ++ +GR RGF F+TY A+ ++G+EF +VI V+ A+
Sbjct: 40 DVLLIKDKTTGRSRGFAFVTYETSSDAALAVTGLNGKEFMGKVIKVDHAK 89
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVILMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQAT 85
>gi|194385978|dbj|BAG65364.1| unnamed protein product [Homo sapiens]
Length = 352
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 108/284 (38%), Gaps = 64/284 (22%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM---------- 62
M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 1 MKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPP 60
Query: 63 --------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCF 96
GG + D GY S RG +
Sbjct: 61 PRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----KRGPP 115
Query: 97 KCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDG 152
R PS + G GG R +GG R + L RD Y+ R DG
Sbjct: 116 PRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGP-PRREPLPSRRDVYLSPRDDG 174
Query: 153 GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKERGYE 209
Y +D Y S+D SRD D PP D D YG S D YP GY GY
Sbjct: 175 --YSTKDSYSSRDYP-SSRD--TRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRDGYG 228
Query: 210 RDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 229 RD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 265
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|395854422|ref|XP_003799690.1| PREDICTED: putative RNA-binding protein 3 [Otolemur garnettii]
Length = 155
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V++A
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDRA 82
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVILMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQAT 85
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R+SGRP+GFG++ + D A A + G E G R I ++ +QP+
Sbjct: 473 VRLPTDRESGRPKGFGYVEFVDVDAAKAAFEALSGTEIGGRSIRLDYSQPR 523
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 33/47 (70%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++R++G+ RGFG + +AD ++ AI M+G+E R ++V++A
Sbjct: 373 RVNIDRNTGKSRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRA 419
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+TY + + AI M+ +E R + VN A +
Sbjct: 31 TDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 83
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ + + AI+ M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRFTQESDAEAAIQAMNNVEFDGRTIRVDKA 78
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 182
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+TY + + AI M+ +E R + VN A +
Sbjct: 31 TDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 83
>gi|352096734|ref|ZP_08957490.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351675956|gb|EHA59114.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 176
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ +D A AI + G E R + +NKA+P+
Sbjct: 28 TNCALPLERDTGRKRGFAFVEMSDEAAEASAIEALQGAELMGRPLRINKAEPR 80
>gi|113955034|ref|YP_729253.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9311]
gi|113882385|gb|ABI47343.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9311]
Length = 181
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF F+ +D A AI + G E R + +NKA+P+
Sbjct: 28 TNCALPLERDTGRKRGFAFVEMSDEAAEASAIEALQGAELMGRPLRINKAEPR 80
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 190
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +++++R++GR RGFGF+TY AI+ + G++ R + VN A +
Sbjct: 71 EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
K+M++R++GR +GFGF+ AI M+G+ R + VN+A+P+
Sbjct: 33 KVMMDRETGRSKGFGFVEMGTGAEAQAAINGMNGQPLEGRAVVVNEARPR 82
>gi|255571230|ref|XP_002526565.1| Circumsporozoite protein precursor, putative [Ricinus communis]
gi|223534126|gb|EEF35843.1| Circumsporozoite protein precursor, putative [Ricinus communis]
Length = 281
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
M ++ + RPRGFGFIT+ A+D + ++ E +++ V +A PK
Sbjct: 1 MFDQQTQRPRGFGFITFDAEDAVDRVLHKVF-HELNGKLVEVKRALPK 47
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ + + R RGF F+ Y ++++ D AI MH +E R+I V A+ K
Sbjct: 86 DVYVPRNHHTQRMRGFAFVRYVEKQSADAAIDAMHEKEIAGRIIRVGMAEEK 137
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A S
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGK------SA 86
Query: 69 HGYRGGG-YSSGGRG 82
G RGGG + + GRG
Sbjct: 87 RGTRGGGAFGAHGRG 101
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|343427629|emb|CBQ71155.1| related to glycine-rich RNA-binding protein [Sporisorium
reilianum SRZ2]
Length = 192
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T+A + D AI +H +E R I VN A +
Sbjct: 30 TDYIVMKDRETGRSRGFGFVTFATQAEADAAIAALHDQELDGRRIRVNMANSR 82
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D K++ +RDSGR RGFGF+ +++ + A+ M G++ R I V+ A
Sbjct: 64 DAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYAN 113
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ YA D A++ M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYAQDTEADAAMQAMNNEEFDGRRIRVDKA 78
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ YA D A++ M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYAQDTEADAAMQAMNNEEFDGRRIRVDKA 78
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 161
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+TY + + AI M+ +E R + VN A +
Sbjct: 31 TDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 83
>gi|345493962|ref|XP_003427189.1| PREDICTED: RNA-binding protein lark-like [Nasonia vitripennis]
Length = 382
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 23 RGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 82
R +GF+ ++DAI+E++G+ + QP M ++S R
Sbjct: 73 RNYGFVHLEATGDVNDAIKELNGQ--------IVDGQP-MKVQISTSRVR---------- 113
Query: 83 SYGADRPGGQD--DCFKCGRPGHWARDCPSAVGGRGGAGG 120
RPG D C++CGR GHW+++CP +GG GG
Sbjct: 114 ----QRPGMGDPEQCYRCGRGGHWSKECP-----KGGMGG 144
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ Y + ++AI M G+EF R + V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQEFDGRRVRVDKA 78
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPSDAKDAAREMNGKSLDGKNIKVEQAT 85
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQAT 85
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ ++++ R RGFGFIT+A+ DA+R M+G R I V+ A
Sbjct: 33 SEVVVIKDKETQRSRGFGFITFANPEHASDAMRAMNGESVDGRQIRVDHA 82
>gi|356526819|ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 176
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAI+ + G+ G RV E+S ++S G
Sbjct: 36 RPPGYAFIEFDDRRDALDAIQALDGKN-GWRV------------ELS--------HNSKG 74
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
G G R G C++CG PGH+AR+C +G RG G
Sbjct: 75 GGRGGRGRGGEDTKCYECGEPGHFARECRLRIGSRGLGSG 114
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ +++++R++GR RGFGF+TY AI+ + G++ R + VN A +
Sbjct: 71 EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D +M +R++GR RGFGF+T +D A + AI ++ + R + V+KA
Sbjct: 48 TDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIEALNNGDLDGRQVRVDKA 97
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPSDAKDAAREMNGKSLDGKNIKVEQAT 85
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVILMKDRETNKSRGFAFVTFESPSDAKDAAREMNGKSLDGKNIKVEQAT 85
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ--PKMGGEVSDH-GYRGGGYSS 78
P GF ++ + D R DDAI+ + G+E R I V ++ P+ G D + GG
Sbjct: 40 PPGFAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGD 99
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
GG GS A P D C+ CG GH+A DC
Sbjct: 100 GGGGSRRAFHPS--DRCYNCGETGHYAYDC 127
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|242032759|ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
gi|241917628|gb|EER90772.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
Length = 366
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 95 CFKCGRPGHWARDCPSAV 112
CFKCG PGHWARDCP +V
Sbjct: 96 CFKCGDPGHWARDCPQSV 113
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDCP 109
GGR + PG C+ CGRPGHW+RDCP
Sbjct: 308 GGRPITSSSSPGA---CYNCGRPGHWSRDCP 335
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQAT 85
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 69 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 128
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 129 A-----GKSSDNRSRGYRGG 143
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +RD+ R RGFGF+ ++ D A+ M+ +EF RVI V+KA
Sbjct: 35 VVKDRDTNRSRGFGFVRFSSDSEADAALNAMNNQEFDGRVIRVDKAT 81
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|194477264|ref|YP_002049443.1| RNA-binding protein RbpD [Paulinella chromatophora]
gi|171192271|gb|ACB43233.1| RNA-binding protein RbpD [Paulinella chromatophora]
Length = 132
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
L+R++GR RGF F+ A+ AI ++ E+ R+I VNKA+P+
Sbjct: 34 LDRETGRKRGFAFVEMANEADEQKAIDDLQDVEWMGRMIRVNKAEPR 80
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
H ++ ++ +R++ + RGF FIT+ DA +EM+G+ + I V +A
Sbjct: 32 HIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKEMNGKFLDGKTIKVEQAN 84
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 49 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 108
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 109 A-----GKSSDNRSRGYRGG 123
>gi|363807806|ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
gi|255640857|gb|ACU20711.1| unknown [Glycine max]
Length = 177
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAI+ + G+ G RV E+S ++S G
Sbjct: 36 RPPGYAFIEFDDRRDALDAIQALDGKN-GWRV------------ELS--------HNSKG 74
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGG 120
G G R G C++CG PGH+AR+C +G RG G
Sbjct: 75 GGRGGRGRGGEDTKCYECGEPGHFARECRLRIGSRGLGSG 114
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ + +++ +GRPRGF F+T A +++G + G R ++VN+A+PK
Sbjct: 31 TDVYVAMDKMTGRPRGFAFVTMGTAEEAKAAAEKLNGTDLGGRQLTVNEARPK 83
>gi|352093687|ref|ZP_08954858.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351680027|gb|EHA63159.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 118
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
L+R++GR RGFGF+ A AI ++ E+ R+I VNKA P+
Sbjct: 34 LDRETGRKRGFGFVEMATDEDEQKAIDDLQNVEWMGRMIRVNKATPR 80
>gi|343427628|emb|CBQ71156.1| related to glycine-rich RNA-binding protein [Sporisorium
reilianum SRZ2]
Length = 175
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T+A + D AI +H +E R I VN A +
Sbjct: 30 TDYIVMKDRETGRSRGFGFVTFATQAEADAAIAALHDQELDGRRIRVNMANSR 82
>gi|113953042|ref|YP_730260.1| RNA-binding protein [Synechococcus sp. CC9311]
gi|113880393|gb|ABI45351.1| putative RNA-binding protein [Synechococcus sp. CC9311]
Length = 126
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
L+R++GR RGFGF+ A AI ++ E+ R+I VNKA P+
Sbjct: 34 LDRETGRKRGFGFVEMATDEDEQKAIDDLQNVEWMGRMIRVNKATPR 80
>gi|159472653|ref|XP_001694459.1| glycine-rich RNA-binding protein [Chlamydomonas reinhardtii]
gi|158276683|gb|EDP02454.1| glycine-rich RNA-binding protein [Chlamydomonas reinhardtii]
Length = 165
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D + +R++GR RGFGF+T + A A E G EF R I VN+A P
Sbjct: 31 DAFVATDRETGRSRGFGFVTL-EANAAKSACSECDGTEFMGRTIRVNEATP 80
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 112/287 (39%), Gaps = 62/287 (21%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 95
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADR---P 89
GG V D GY S RG R P
Sbjct: 96 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHVDDGGYSMNFNMSSSRGPLPVKRGPAP 155
Query: 90 GGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDR 149
K P AR S +GGR R +GG R + L RD Y+ R
Sbjct: 156 RSGGPPPKRSAPSGPARSS-SGMGGRAPVS---RGRDSYGGPPRR-EPLPSRRDVYLSPR 210
Query: 150 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKER 206
DG Y +D S+D SRD D PP D YG S D YP GY
Sbjct: 211 DDG--YSTKDSDSSRDYP-SSRD--TRDYAPPPRGYTYRD-YGHSSSRDDYPSRGYSDRD 264
Query: 207 GYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 265 GYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 304
>gi|302831616|ref|XP_002947373.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
gi|300267237|gb|EFJ51421.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
Length = 582
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++++++ ++ R +G+ F+T+AD A + AI+ M+G + + VNKA
Sbjct: 104 NVQLVMDHETQRSKGYAFVTFADDDAYEYAIKRMNGVTVRGKEVKVNKA 152
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ--PKMGGEVSDH-GYRGGGYSS 78
P GF ++ + D R DDAI+ + G+E R I V ++ P+ G D + GG
Sbjct: 48 PPGFAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGD 107
Query: 79 GGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
GG GS A P D C+ CG GH+A DC
Sbjct: 108 GGGGSRRAFHPS--DRCYNCGETGHYAYDC 135
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM + + +PRGFGFITYAD +D + + H + + + + PK
Sbjct: 50 DSVIMKNKHTSQPRGFGFITYADPAVVDHVMEDSH--VINGKQVEIKRTIPK 99
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +IM + + R RGFGF+ + + +DD + + + + + KA+PK
Sbjct: 140 DHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANGNMIDLAGSKVEIKKAEPK 191
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T+ D AI ++ +E R I VN A K
Sbjct: 31 DSIVMRDRETGRSRGFGFVTFGTPEEADAAINNLNEQELDGRRIRVNLANAK 82
>gi|242050084|ref|XP_002462786.1| hypothetical protein SORBIDRAFT_02g031980 [Sorghum bicolor]
gi|241926163|gb|EER99307.1| hypothetical protein SORBIDRAFT_02g031980 [Sorghum bicolor]
Length = 270
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 20/101 (19%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHG 70
+ ++ +R+S R RG F+ + R A EMHG+ R +S + A
Sbjct: 87 VTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLSASIA------------ 134
Query: 71 YRGGGYSSGGRGSYGADRPGGQDD--CFKCGRPGHWARDCP 109
+ GR + R +D C++CG GH + +CP
Sbjct: 135 ------ADNGRAAEFIRRRVYRDKSRCYECGEEGHLSYECP 169
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T++ AI ++ +E R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTFSSANEAQTAITSLNEQELDGRRIRVNLANAR 82
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 53 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 112
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 113 A-----GKSSDNRSRGYRGG 127
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +RD+ R RGFGF+ ++ D A+ M+ +EF RVI V+KA
Sbjct: 35 VVKDRDTNRSRGFGFVRFSSDSEADAALNAMNNQEFDGRVIRVDKAT 81
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur
garnettii]
Length = 172
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ +++ +RD+G+ RGFGF+ Y A + AI M G+E R + VN A
Sbjct: 64 TEARVITDRDTGKSRGFGFVNYTSSDAANAAISGMDGKEIDGRPVRVNIAN 114
>gi|410988519|ref|XP_004000531.1| PREDICTED: putative RNA-binding protein 3 [Felis catus]
Length = 160
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 34 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 93
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 94 A-----GKSSDNRSRGYRGG 108
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA REM+G+ + I V +A
Sbjct: 36 EVILMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQAT 85
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++IM ER++GR RGFG++ YAD + A E R I+++ A+P+
Sbjct: 254 VRIMTERETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPR 304
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A G+ SD
Sbjct: 33 SEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA-----GKSSD 87
Query: 69 H---GYRGG 74
+ GYRGG
Sbjct: 88 NRSRGYRGG 96
>gi|58258751|ref|XP_566788.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106947|ref|XP_777786.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260484|gb|EAL23139.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222925|gb|AAW40969.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1641
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 90 GGQDDCFKCGRPGHWARDCP 109
GG D CFKCG+PGH+AR+CP
Sbjct: 699 GGGDACFKCGQPGHFARECP 718
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ IM ++++ RPRGFGFI++ + A+D + + + + + V +A PK
Sbjct: 137 TDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTF-HDLNGKQVEVKRALPK 188
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+M ++ +GRPRGFGF+ +AD +D +++ H R + KA
Sbjct: 37 VMRDKTTGRPRGFGFVVFADPNILDRVLQDKH--TIDGRTVEAKKA 80
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A G+ SD
Sbjct: 45 SEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA-----GKSSD 99
Query: 69 H---GYRGG 74
+ GYRGG
Sbjct: 100 NRSRGYRGG 108
>gi|351706516|gb|EHB09435.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|212722094|ref|NP_001132794.1| uncharacterized protein LOC100194283 [Zea mays]
gi|194695412|gb|ACF81790.1| unknown [Zea mays]
gi|224035575|gb|ACN36863.1| unknown [Zea mays]
gi|413939271|gb|AFW73822.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939272|gb|AFW73823.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939273|gb|AFW73824.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|448878150|gb|AGE46038.1| arginine/serine-rich splicing factor RSZ20 transcript I [Zea mays]
gi|448878152|gb|AGE46039.1| arginine/serine-rich splicing factor RSZ20 transcript II [Zea mays]
gi|448878154|gb|AGE46040.1| arginine/serine-rich splicing factor RSZ20 transcript III [Zea
mays]
gi|448878156|gb|AGE46041.1| arginine/serine-rich splicing factor RSZ20 transcript IV [Zea mays]
Length = 173
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G+ +G+R +
Sbjct: 36 KPPGFAFIDFDDRRDAEDAIRDLDGK----------------------NGWRVELSRNSS 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
G + C++CG GH+AR+C +G GG G
Sbjct: 74 GRGGRDRYGGSESKCYECGETGHFARECRLRIGS-GGLG 111
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T++ AI ++ +E R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISSLNEQELDGRRIKVNLANAR 82
>gi|417396333|gb|JAA45200.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 158
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus
glaber]
Length = 167
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD GYRGG
Sbjct: 82 A-----GKSSDSRSRGYRGG 96
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+M++ +SGR RGFGF+T+ + +++ E G + + V A PK
Sbjct: 179 VMVDHNSGRSRGFGFVTFGEESSVEKVFAAGQMHELGGKQVEVKSATPK 227
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAQDAARDMNGKSLDGKAIKVEQAT 85
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVS 67
+M ++ +GRPRGFGF+ ++D +D ++E H R + V +A + +VS
Sbjct: 37 VMRDKLTGRPRGFGFVIFSDPSVLDRVLQEKH--SIDTREVDVKRAMSREEQQVS 89
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ IM ++ + RPRGFGF+++ A+D + + + + + V +A PK
Sbjct: 137 TDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTF-HDLSGKQVEVKRALPK 188
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A G+ SD
Sbjct: 33 SEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA-----GKSSD 87
Query: 69 H---GYRGG 74
+ GYRGG
Sbjct: 88 NRSRGYRGG 96
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+ +++++R++GR RGF F+TY AI+ + G++ R + VN A
Sbjct: 68 EARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 117
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|168699727|ref|ZP_02732004.1| putative RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 113
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+I+++R++GR RGFGF+ A+ + AI ++ + R ++VN A+P+
Sbjct: 12 QIVMDRETGRSRGFGFVEMANEQEAQAAIDALNNQLMNGRPLTVNIAKPR 61
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
Length = 130
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ +++++R++GR RGFGF+T+ + A++ M G E G R I V+ A
Sbjct: 37 TEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGMDGHELGGRSIRVDYA 86
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ YA+ D A++ ++ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYANDAEADAAMQALNNEEFDGRRIRVDKA 78
>gi|242066788|ref|XP_002454683.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|241934514|gb|EES07659.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|448878294|gb|AGE46110.1| arginine/serine-rich splicing factor RSZ19 transcript II [Sorghum
bicolor]
Length = 163
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G+ +G+R +
Sbjct: 36 KPPGFAFIDFDDRRDAEDAIRDLDGK----------------------NGWRVELSRNSS 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
G + C++CG GH+AR+C +G GG G
Sbjct: 74 GRGGRDRYGGSESKCYECGETGHFARECRLRIGS-GGLG 111
>gi|224144714|ref|XP_002325387.1| predicted protein [Populus trichocarpa]
gi|222862262|gb|EEE99768.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 17/96 (17%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ F+ + DRR DAIR + G+ G RV E+S + GGG S G
Sbjct: 36 RPPGYAFVEFDDRRDAIDAIRALDGKN-GWRV------------ELSHNSKGGGGRSGDG 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRG 116
G G + C++CG PGH+AR+C +G RG
Sbjct: 83 HGRGGGE----DSKCYECGEPGHFARECRLRIGSRG 114
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 111/297 (37%), Gaps = 76/297 (25%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM------ 62
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 37 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG 96
Query: 63 ------------------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 92
GG + D GY S RG +
Sbjct: 97 PPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPV-----K 151
Query: 93 DDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDD 148
R PS + G GG R +GG R + L RD Y+
Sbjct: 152 RGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLSP 210
Query: 149 RYDGGRYGDRDRYDSKDS-----KYGSRD----RYVSDRYPPAGDRLAGDRYGGS---DR 196
R DG Y +KDS Y SRD R D PP D D YG S D
Sbjct: 211 RDDG--------YSTKDSYFYFCSYSSRDYPSSRDTRDYAPPPRDYTYRD-YGHSSSRDD 261
Query: 197 YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
YP GY GY RD R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 262 YPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYDSYGNSRSAP---PTRGPPPSY 311
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF FIT+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFITFESPADAKDAARDMNGKSLDGKSIKVEQAT 85
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
++ ++ +R++ R RGFGFIT+ + A+R M+G R I V+ A S
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGK------SAR 87
Query: 70 GYRGGGYSSGGRG 82
G RGG + GRG
Sbjct: 88 GTRGGAFGVHGRG 100
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++++R +GR RGFGF+TY AI M G++ R++ V+ A
Sbjct: 61 RVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKDLQGRIVRVSYAH 108
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|406834935|ref|ZP_11094529.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 123
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R++GR RGFGF+ +D + AI ++G EF R ++VN+A+P+
Sbjct: 33 QVVSDRETGRSRGFGFVEMSD--GGEAAIGALNGAEFQGRTLTVNEARPR 80
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+++ +RD+G P+GFG++ ++ A++ M+G E R I V+ A PK
Sbjct: 323 VRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRVDFAPPKQ 374
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
+++ +RDS + RGFG++ +AD A AI E G E R I VN A + E ++
Sbjct: 224 RVVFDRDSQKSRGFGYVEFADLEASAKAI-EKDGSEIDGRAIRVNYATQRKPNEAAEK 280
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Anolis carolinensis]
Length = 384
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ +M ++++ RPRGFGFIT+ A+D + + + +++ V +A P+
Sbjct: 155 TDVVVMYDQNTQRPRGFGFITFDAEDAVDRVLHKTF-HDLSGKMVEVKRALPR 206
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+M ++ +GRPRGFGF+ ++D ++D A+ + H R + V +A
Sbjct: 37 VMRDKLTGRPRGFGFVVFSDPSSVDAALVDPH--TLDGRTVDVKRA 80
>gi|336464677|gb|EGO52917.1| hypothetical protein NEUTE1DRAFT_27845, partial [Neurospora
tetrasperma FGSC 2508]
Length = 102
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ +RD+GR RGFGF+ Y + ++AI M G+EF R + V+KA +
Sbjct: 26 VVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQEFDGRRVRVDKASDR 74
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ +++++R++GR RGFGF+T+ AI+ + G++ R + VN A
Sbjct: 68 EARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 69
++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A G+ SD+
Sbjct: 34 EVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA-----GKSSDN 88
Query: 70 ---GYRGG 74
GYRGG
Sbjct: 89 RSRGYRGG 96
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDHGYRGG 74
A E GYRGG
Sbjct: 82 AGKS--SENRSRGYRGG 96
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA RE++G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARELNGKALDGKPIKVEQAT 85
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T+++ D AI ++ +E R I VN A +
Sbjct: 55 DSIVMRDRDTGRSRGFGFVTFSNSGEADAAINGLNEQELDGRRIKVNMANAR 106
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 62 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 111
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ +RD+GR RGFGF+ Y AI M+ EF R I V+KA
Sbjct: 29 EEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAISAMNNVEFDGRTIRVDKA 78
>gi|379728946|ref|YP_005321142.1| rnp-1 like RNA-binding protein [Saprospira grandis str. Lewin]
gi|378574557|gb|AFC23558.1| rnp-1 like RNA-binding protein [Saprospira grandis str. Lewin]
Length = 122
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+++R++ R +GFGF+ D AI ++ EF +R I V KA+P+
Sbjct: 31 KIIMDRETDRSKGFGFVEMPDEEDGQAAIDALNETEFHERTIVVKKARPR 80
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +RD+GR RGFGF+T++ A+ ++ +E R I VN A +
Sbjct: 29 TDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDALNEQELDGRRIRVNVANAR 81
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|338732260|ref|YP_004670733.1| putative RNA-binding protein rbpA [Simkania negevensis Z]
gi|336481643|emb|CCB88242.1| putative RNA-binding protein rbpA [Simkania negevensis Z]
Length = 137
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MQQCLTHN---NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+ Q LT + KI+ +RD+G+ RGFGF+ + AI +++G+E G R ++V++
Sbjct: 44 LLQLLTEFGSPKNPKIIKDRDTGQSRGFGFVELESKEEGTAAIEKLNGKEIGGRALTVSE 103
Query: 58 A 58
A
Sbjct: 104 A 104
>gi|303276565|ref|XP_003057576.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460233|gb|EEH57527.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 835
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 95 CFKCGRPGHWARDCPS 110
CFKCG GHWARDCP+
Sbjct: 775 CFKCGESGHWARDCPT 790
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 95 CFKCGRPGHWARDCPS 110
C+KC +PGHWARDCP+
Sbjct: 737 CYKCQQPGHWARDCPN 752
>gi|226507970|ref|NP_001140374.1| uncharacterized protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 95 CFKCGRPGHWARDCPSA 111
C+KCG PGH ARDCPSA
Sbjct: 125 CYKCGEPGHMARDCPSA 141
>gi|448878292|gb|AGE46109.1| arginine/serine-rich splicing factor RSZ19 transcript I [Sorghum
bicolor]
Length = 163
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR +DAIR++ G+ +G+R +
Sbjct: 36 KPPGFAFIDFDDRRDAEDAIRDLDGK----------------------NGWRVELSRNSS 73
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
G + C++CG GH+AR+C +G GG G
Sbjct: 74 GRGGRDRYGGSESKCYECGETGHFARECRLRIGS-GGLG 111
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 181
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ Y AI M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYNQEADAQSAIAAMNNVEFDGRTIRVDKA 78
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D+ I ++R +G RGFGF+ + +RR +DAIR+M +EF I+V A
Sbjct: 539 DVFIPVDRYTGVSRGFGFVRFYERRDAEDAIRDMDNKEFQGNRITVAAAM 588
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+TY+ +AI ++ R I VN A +
Sbjct: 31 DSIVMRDRETGRSRGFGFVTYSSEEEASNAISGLNETSLDGRQIKVNLANAR 82
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 6 THNNDLKIMLER-----DSGRPRGFGFITYADRRAMDDAIREMHGREF-GDR-VISVNKA 58
T DL+ + R D F FI ++D R D+A ++GR+ G R V+ +
Sbjct: 22 TRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEARYYLNGRDLDGSRIVVEFARG 81
Query: 59 QPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC 108
P+ Y G G P G CF CG GHWARDC
Sbjct: 82 GPRGAAGGRTREYLGRGP------------PPGSGRCFNCGNDGHWARDC 119
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +RDSGR +GFGF+T + + + AI ++G + R I V++A+
Sbjct: 271 RVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAE 318
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + DA+R M+G R I V+ A
Sbjct: 58 SEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 107
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDHGYRGG 74
A E GYRGG
Sbjct: 82 AGKS--SENRSRGYRGG 96
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus
leucogenys]
Length = 144
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDH---GYRGG 74
A G+ SD+ GYRGG
Sbjct: 82 A-----GKSSDNRSRGYRGG 96
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDHGYRGG 74
A E GYRGG
Sbjct: 82 AGKS--SENRSRGYRGG 96
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ ++++ R RGFGFIT+A+ DA+R M+G R I V+ A
Sbjct: 112 SEVVVIKDKETQRSRGFGFITFANPEHASDAMRAMNGESVDGRQIRVDHA 161
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +RD+GR RGFGF+T++ + D AI ++ +E R I VN A +
Sbjct: 31 DSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGGLNEQELDGRRIKVNLANAR 82
>gi|428165567|gb|EKX34559.1| hypothetical protein GUITHDRAFT_119306 [Guillardia theta CCMP2712]
Length = 259
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 20 GRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
G RGFGF+ + D A D A+RE+ DR I++ K++
Sbjct: 67 GESRGFGFVNFEDPEAADTAMRELQDVVVADRAITIQKSR 106
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDHGYRGG 74
A E GYRGG
Sbjct: 82 AGKS--SENRSRGYRGG 96
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +M +R++ + RGF FIT+ A+R+M+G+ + I V +A
Sbjct: 35 SEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSLDGKAIKVAQAT 85
>gi|256090142|ref|XP_002581072.1| cellular nucleic acid binding protein [Schistosoma mansoni]
gi|353232302|emb|CCD79657.1| putative cellular nucleic acid binding protein [Schistosoma
mansoni]
Length = 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 93 DDCFKCGRPGHWARDCPSA 111
DDCFKCGRPGH+ARDC +A
Sbjct: 3 DDCFKCGRPGHYARDCQAA 21
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 26 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 75
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHG 70
+ IM ER +G+ RGF F+++ D +D + + + V KA PK E S+
Sbjct: 133 IDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKY-HTINSHNCEVRKALPKQEMEASNQR 191
Query: 71 YRGGG 75
RGGG
Sbjct: 192 NRGGG 196
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ +RD+GR RGFGF+ Y AI M+ EF R I V+KA
Sbjct: 29 EEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIAAMNNVEFDGRTIRVDKA 78
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ R++G+ RGFGF+ Y + D AI M E R + VN A+P+
Sbjct: 60 TVIENRETGQSRGFGFVVYEQKHEADAAISRMDNAELDGRTLRVNFARPR 109
>gi|347832409|emb|CCD48106.1| hypothetical protein [Botryotinia fuckeliana]
Length = 200
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 13 IMLERDSGRPRGFGFITY-------ADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63
++ +RD+GR RGFGF+ Y + + AI+EM+ EF R I V+KA + G
Sbjct: 33 VVKDRDTGRSRGFGFVRYGQGNPDSSPEADAEKAIQEMNSVEFDGRTIRVDKASERAG 90
>gi|253771018|gb|ACT35657.1| vasa-like protein [Haliotis asinina]
Length = 763
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 95 CFKCGRPGHWARDCPSA--VGGRGGAGGSF 122
CFKCG GH++R+CP+A GGRGG+ F
Sbjct: 209 CFKCGEEGHFSRECPNADSSGGRGGSRACF 238
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +RDSGR +GFGF+T + + + AI ++G + R I V++A+
Sbjct: 287 RVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAE 334
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +RDSGR +GFGF+T + + + AI ++G + R I V++A+
Sbjct: 279 RVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAE 326
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKSIKVEQAT 85
>gi|256090144|ref|XP_002581073.1| cellular nucleic acid binding protein [Schistosoma mansoni]
Length = 190
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 92 QDDCFKCGRPGHWARDCPSA 111
DDCFKCGRPGH+ARDC +A
Sbjct: 2 SDDCFKCGRPGHYARDCQAA 21
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF FIT+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETSKSRGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQAT 85
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+++ ER + R RG+G++ + D+ + A++EMHG+E R I+ + + K G
Sbjct: 217 RVIYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPINCDLSTSKPAG 269
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
D+ I+ +R+SG+ RGFGF+T AI M+G R + VN+A+ ++
Sbjct: 30 TDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIENMNGAMMDGRPLRVNEAEERV 83
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+++++ +R++GR RGFGF++Y + A+ M GR R I VN A + G
Sbjct: 65 EVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRTIRVNYATQRQPG 119
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF FIT+ DA R+M+G+ + I V +A
Sbjct: 55 EVLLMKDRETSKSRGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQAT 104
>gi|403263414|ref|XP_003924028.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 335
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 107/282 (37%), Gaps = 66/282 (23%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA-QPKM---------- 62
M +R++ + RGF F+T+ DA R+M+G+ + I V +A +P
Sbjct: 1 MKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDRKAIKVEQATKPSFESGRRGPPPP 60
Query: 63 --------------------GGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPG 102
GG + D GY S RG +
Sbjct: 61 PRGLRGGRGGSGGTRGPPPRGGHMDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGP 115
Query: 103 HWARDCPS----AVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDR 158
R PS + G GG R +GG R + L RD Y+ R DG
Sbjct: 116 PPKRSAPSGPARSSSGMGGRAPVSRGRDSYGGPPRR-EPLPSRRDVYLPPRDDG------ 168
Query: 159 DRYDSKDSKYGSRDRYVSDR----YPPAGDRLAGDRYGGS---DRYPVNGYGKERGYERD 211
Y +KDS Y SRD Y S R Y P YG S D YP GY GY RD
Sbjct: 169 --YSTKDS-YSSRD-YPSSRDTRGYAPPPRGYTYRDYGHSSSRDDYPSRGYSDRDGYGRD 224
Query: 212 VGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 252
R SD + SGG RD Y SR+AP P+RG PS+
Sbjct: 225 ---RDYSD-HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 259
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFITY DA+R M+G R I V++A
Sbjct: 34 EVVVVKDRETQRSRGFGFITYCRPEDAKDAMRAMNGESVDGRQIRVDQA 82
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T++ + AI ++ +E R I VN A +
Sbjct: 31 DSIVMRDRETGRSRGFGFVTFSSSGEAESAISSLNEQELDGRRIKVNLANAR 82
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A E
Sbjct: 33 SEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS--SENRS 90
Query: 69 HGYRGG 74
GYRGG
Sbjct: 91 RGYRGG 96
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+++ +RDSGR +GFGF+T + + + AI ++G + R I V++A+
Sbjct: 284 RVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAE 331
>gi|154313713|ref|XP_001556182.1| hypothetical protein BC1G_05706 [Botryotinia fuckeliana B05.10]
Length = 197
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 13 IMLERDSGRPRGFGFITY-------ADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63
++ +RD+GR RGFGF+ Y + + AI+EM+ EF R I V+KA + G
Sbjct: 33 VVKDRDTGRSRGFGFVRYGQGNPDSSPEADAEKAIQEMNSVEFDGRTIRVDKASERAG 90
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKSIKVEQAT 85
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
D+ + L+ +SGRPRGFGF+ + D R + +A M G+ I V+ AQ
Sbjct: 96 DVYLPLDYNSGRPRGFGFVEFCDPRDVVEAKNAMDGKVVDGNAIQVDIAQ 145
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++ +H D+ +++++RD+GR +GFGFITY A AI M G++ R++ V
Sbjct: 48 LKDAFSHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAAAAISAMDGKDLQGRMVKVAY 107
Query: 58 AQ 59
A
Sbjct: 108 AT 109
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ IM ++ + RPRGFGF+++ A+D + + + + + V +A PK
Sbjct: 132 TDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTF-HDLSGKQVEVKRALPK 183
>gi|426257071|ref|XP_004022158.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Ovis aries]
gi|426257073|ref|XP_004022159.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Ovis aries]
gi|426257075|ref|XP_004022160.1| PREDICTED: putative RNA-binding protein 3 isoform 3 [Ovis aries]
gi|426257077|ref|XP_004022161.1| PREDICTED: putative RNA-binding protein 3 isoform 4 [Ovis aries]
gi|426257079|ref|XP_004022162.1| PREDICTED: putative RNA-binding protein 3 isoform 5 [Ovis aries]
Length = 160
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFIT+ + +A+R M+G R I V+ A
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHA 82
>gi|328773817|gb|EGF83854.1| hypothetical protein BATDEDRAFT_21388 [Batrachochytrium
dendrobatidis JAM81]
Length = 161
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
+ L HN L + GR +GFGF+ YA+ + ++A+ +M +E R + V+ + P
Sbjct: 11 VLAWLLHN-----FLSFNPGRSKGFGFVEYAEPKGAEEAVEKMRDQELDGRTVRVDISNP 65
Query: 61 K 61
+
Sbjct: 66 R 66
>gi|430745770|ref|YP_007204899.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017490|gb|AGA29204.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 133
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +RD+GR +GFGF+ AI +H +E G R ++VN+A+P+
Sbjct: 34 QVIQDRDTGRSKGFGFVEMDSDAEAQAAIDGLHDQEHGGRRLTVNEAKPR 83
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF ++ + D R DA+R + G+ DR + V+ + + G + G Y G
Sbjct: 47 PPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRG--PAPYDRYGG 104
Query: 82 GSYGADRPGGQDD--CFKCGRPGHWARDC 108
G G +R G + D C+ C GH+ARDC
Sbjct: 105 GGGGGNR-GFRSDMRCYNCSETGHFARDC 132
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ Y+ AI M+ EF R I V++A
Sbjct: 33 VVKDRDTGRSRGFGFVRYSQDEDAQKAIDAMNNVEFDGRTIRVDRA 78
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE 65
++ LERDS +PRGF FIT+ D +D + + H G R V KA K E
Sbjct: 133 FELPLERDSEKPRGFAFITFEDHDTVDKLVAKRHHYVNGVRC-EVKKALSKAEME 186
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF ++ + D R DA+R + G+ DR + V+ + + G + G Y G
Sbjct: 47 PPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRG--PAPYDRYGG 104
Query: 82 GSYGADRPGGQDD--CFKCGRPGHWARDC 108
G G +R G + D C+ C GH+ARDC
Sbjct: 105 GGGGGNR-GFRSDMRCYNCSETGHFARDC 132
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF ++ + D R DA+R + G+ DR + V+ + + G + G Y G
Sbjct: 47 PPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRG--PAPYDRYGG 104
Query: 82 GSYGADRPGGQDD--CFKCGRPGHWARDC 108
G G +R G + D C+ C GH+ARDC
Sbjct: 105 GGGGGNR-GFRSDMRCYNCSETGHFARDC 132
>gi|441642329|ref|XP_004090435.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Nomascus leucogenys]
Length = 503
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+KIM + SG+ +GF FI++ D +MD + + + RE G V KA PK
Sbjct: 321 IKIMTDXGSGKKKGFAFISFGDDDSMDKIVIQKYHRENGHNC-EVRKALPK 370
>gi|254432068|ref|ZP_05045771.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
gi|197626521|gb|EDY39080.1| RNA-binding protein RbpD [Cyanobium sp. PCC 7001]
Length = 119
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
L+R++GR RGF F+ A+ AI ++ E+ R+I VNKA P+
Sbjct: 34 LDRETGRKRGFAFVELANDADEQKAIDDLQDVEWMGRMIRVNKATPR 80
>gi|302496006|ref|XP_003010008.1| hypothetical protein ARB_03747 [Arthroderma benhamiae CBS 112371]
gi|291173542|gb|EFE29368.1| hypothetical protein ARB_03747 [Arthroderma benhamiae CBS 112371]
Length = 224
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 16 ERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+RD+ R RGFGF+ ++ D A+ M+ +EF RVI V+KA
Sbjct: 113 DRDTNRSRGFGFVRFSSDSEADAALTAMNNQEFDGRVIRVDKA 155
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQAT 85
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFIT+ + +A+R M+G R I V+ A
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHA 82
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ ++R+SG+ RGF ++ ++ A+ EM+G++ R ++V+ +QP+
Sbjct: 140 RVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDISQPR 189
>gi|345321284|ref|XP_001521058.2| PREDICTED: putative RNA-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 121
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ +R++ R RGFGFITY DA+R M+G R I V++A
Sbjct: 6 VVVVKDRETQRSRGFGFITYRRPEDAKDAMRAMNGESVDGRQIRVDQA 53
>gi|383118922|ref|ZP_09939662.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
gi|251944121|gb|EES84630.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
Length = 122
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
KI+++R++GR +GFGF+ + + AI +H +E + ++V+ A+P+
Sbjct: 31 KIVMDRETGRSKGFGFVEMPNDEEGNAAIAALHEKEIDGKTLAVSVARPR 80
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D IM +R++GR RGFGF+T++ + A+ ++ +E R I VN A +
Sbjct: 29 TDSIIMRDRETGRARGFGFVTFSTEEQANAAVDALNEQELDGRRIRVNVANAR 81
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ Y + AI M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRYGQESDAEAAITAMNNIEFDGRTIRVDKA 78
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D ++ +RD+GR RGFGF+ ++ A+ M+ +EF R I V+KA +
Sbjct: 30 DATVVKDRDTGRSRGFGFVRFSTDEEATAAMNAMNNQEFDGRQIRVDKATER 81
>gi|256839767|ref|ZP_05545276.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738697|gb|EEU52022.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 123
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 21/96 (21%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
K++++R++GR RGFGF+ +D AI E++ + +VI++ +A+P+ D G
Sbjct: 31 KVIMDRETGRSRGFGFVELSDDELAKKAIEELNQASYDGKVINITEARPR-----EDRGD 85
Query: 72 RGGGYSSGGRGSYGA----------------DRPGG 91
RGG +++ G YG+ +R GG
Sbjct: 86 RGGRFNNNRGGGYGSNRGGGYGSNRGGGYGSNRDGG 121
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 68
+++ ++ ERD+ R +GFGF+T+ + DA+ M+G+ R I V+ A G
Sbjct: 32 SEVIVIRERDTQRSKGFGFVTFENPDDARDALAGMNGKTVDGRQIRVDHAGKSSGNRSRS 91
Query: 69 H--GYRGGGYSS-GGRGSYGADRPGG 91
+ G G YS GGR S G R GG
Sbjct: 92 YQSGQSYGNYSFRGGRSSRGFSRDGG 117
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVS 67
+M ++ +GRPRGFGF+ ++D +D +++ H R + V +A + +VS
Sbjct: 37 VMRDKLTGRPRGFGFVIFSDPSVLDRVLQDKH--NIDTREVDVKRAMSREEQQVS 89
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ IM ++ + RPRGFGF+++ A+D + + + + + V +A PK
Sbjct: 137 TDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHKTF-HDLSGKQVEVKRALPK 188
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 2 QQCLT-------HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVIS 54
+QCL ++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I
Sbjct: 19 EQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGMNGKTVDGRQIR 78
Query: 55 VNKA 58
V++A
Sbjct: 79 VDQA 82
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 21/96 (21%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
K++++R++GR RGFGF+ +D AI E++ + +VI++ +A+P+ D G
Sbjct: 31 KVIMDRETGRSRGFGFVELSDDELAKKAIEELNQASYDGKVINITEARPR-----EDRGD 85
Query: 72 RGGGYSSGGRGSYGA----------------DRPGG 91
RGG +++ G YG+ +R GG
Sbjct: 86 RGGRFNNNRGGGYGSNRGGGYGSNRGGGYGSNRDGG 121
>gi|357121886|ref|XP_003562648.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Brachypodium distachyon]
Length = 546
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 90/231 (38%), Gaps = 40/231 (17%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP--KMGGEVSDH 69
+I+ + +G + FI + + A + A +M DR I V+ +Q K+ G+
Sbjct: 272 EIIRDFKTGDSLCYAFIEFEVKEACERAYFKMDNCLIDDRRIHVDFSQSVSKLWGQFR-- 329
Query: 70 GYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDC-PSAVGGRGGAGGSFSSRSRF 128
+ R +D CFKCG P H ARDC A G +
Sbjct: 330 ---------------QSKRNANKDGCFKCGAPDHLARDCDQDAEQKNKGPNYVLKDDNTQ 374
Query: 129 GGVGVRGDY-------LGGGRDRY----------IDDRYDGG-RYGDRDRYDSKDSKYGS 170
G R Y G +DR+ +DDR G +GDRDR +S+D Y
Sbjct: 375 RGSNNRRSYDLVFDADTAGQQDRHQNTDRRKIQKVDDRRSGLPPWGDRDR-NSRDRNYSD 433
Query: 171 RDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRY 221
D Y +GDR +G Y D + R ++D R+G+ RY
Sbjct: 434 EKGRRQDGYHRSGDRSSG-SYDDRDYKQPESKSRNRADDKDYRRRSGAGRY 483
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++++R++GR RGFGF+T+ AI+ + G++ R + VN A
Sbjct: 70 RVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
>gi|405121733|gb|AFR96501.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 146
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 14 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
M +R++GR RGFGF+TY + + AI M+ +E R + VN A +
Sbjct: 1 MKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 48
>gi|116626576|ref|YP_828732.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229738|gb|ABJ88447.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 116
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ ++ +RD+GR RGF F+ D D AI ++G E R +++N+A+PK
Sbjct: 31 VNLVTDRDTGRSRGFAFVEMTDAAEADRAIAALNGHELDGRALNINEARPK 81
>gi|358391693|gb|EHK41097.1| hypothetical protein TRIATDRAFT_301780 [Trichoderma atroviride
IMI 206040]
Length = 171
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ + AI M+ EF R I V+KA
Sbjct: 33 VVKDRDTGRSRGFGFVRFVQEADAQAAIDAMNNVEFDGRTIRVDKA 78
>gi|150007582|ref|YP_001302325.1| RNA-binding protein rbpA [Parabacteroides distasonis ATCC 8503]
gi|255013892|ref|ZP_05286018.1| putative RNA-binding protein rbpA [Bacteroides sp. 2_1_7]
gi|298375526|ref|ZP_06985483.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|410101874|ref|ZP_11296802.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
gi|423331931|ref|ZP_17309715.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|149936006|gb|ABR42703.1| putative RNA-binding protein rbpA [Parabacteroides distasonis ATCC
8503]
gi|298268026|gb|EFI09682.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|409229772|gb|EKN22644.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|409239672|gb|EKN32456.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
Length = 123
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 21/96 (21%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGY 71
K++++R++GR RGFGF+ +D AI E++ + +VI++ +A+P+ D G
Sbjct: 31 KVIMDRETGRSRGFGFVELSDDELAKKAIEELNQASYDGKVINITEARPR-----EDRGD 85
Query: 72 RGGGYSSGGRGSYGA----------------DRPGG 91
RGG +++ G YG+ +R GG
Sbjct: 86 RGGRFNNNRGGGYGSNRGGGYGSNRGGGYGSNRDGG 121
>gi|395743087|ref|XP_003780683.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2 [Pongo abelii]
Length = 392
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 7 HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
H ++ +M +R++ + RGF F+T+ A R+M+G+ + I V +A
Sbjct: 33 HIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQAT 85
>gi|224121284|ref|XP_002330789.1| predicted protein [Populus trichocarpa]
gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + D+R DAI E+ G+ G RV E+S + GGG GG
Sbjct: 36 RPPGYAFIDFDDKRDAQDAIHELDGKN-GWRV------------ELSHNSRGGGGGGGGG 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
RG G C++CG PGH+AR+C
Sbjct: 83 RGGGRGRSGGSDLKCYECGEPGHFAREC 110
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R+S R RGFGF+T+ + DA+ M+G+ R I V++A
Sbjct: 34 EVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVDQA 82
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D K++ +RD+G+ RGFGF+T+A + A ++ E R I V+ A
Sbjct: 31 DAKVIQDRDTGKSRGFGFVTFASADEAEAAKNALNQTELDGREIRVDSA 79
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ +++++R++GR RGFGF+T+ AI+ + G++ R + VN A
Sbjct: 68 EARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF FIT+ DA R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETRKSRGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQAT 85
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 A 58
A
Sbjct: 82 A 82
>gi|71013156|ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
gi|46098217|gb|EAK83450.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
Length = 192
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D +M +R++GR RGFGF+T+A + D AI ++ +E R I VN A +
Sbjct: 31 DYIVMKDRETGRSRGFGFVTFATQAEADAAIAALNEQELDGRRIRVNMANSR 82
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+++ +RD+G P+GFG++ ++ A++ M+G E R I V+ A PK
Sbjct: 325 VRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix
jacchus]
Length = 172
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 A 58
A
Sbjct: 82 A 82
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 17 RDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
R++GRPRGFGF+ AI + G E+ R + VNKA+P+
Sbjct: 36 RETGRPRGFGFVEMDTDAEETAAIEALDGAEWMGRDLKVNKAKPR 80
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ A+R+M+G+ + I V +A
Sbjct: 30 EVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKSLDGKAIKVAQAT 79
>gi|430745977|ref|YP_007205106.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017697|gb|AGA29411.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 130
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++++++ SGR RGFGF+ AI ++G +G R ++VN+A+P+
Sbjct: 33 QVIIDKFSGRSRGFGFVEMDHDDEAQAAIDALNGTAYGGRPLTVNEARPR 82
>gi|87123335|ref|ZP_01079186.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. RS9917]
gi|86169055|gb|EAQ70311.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. RS9917]
Length = 168
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF FI AD A AI + G E R + +NKA+P+
Sbjct: 28 TNCALPLERDTGRKRGFAFIEMADEAAEAAAIEALQGAELMGRPLRINKAEPR 80
>gi|406866241|gb|EKD19281.1| glycine-rich RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 423
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +RD+GR RGFGF+ Y + AI M+ EF R I V+KA
Sbjct: 191 VVKDRDTGRSRGFGFVRYGSEADAEAAITAMNNIEFDGRTIRVDKA 236
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVI-SVNKAQPKMGGEVSDH 69
++ L+RD + FI ++D R DDA + GR+ G R+I K P+ G D+
Sbjct: 39 EVELKRD------YAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEFAKGVPRGSGGSRDY 92
Query: 70 GYRGGG------YSSGGRGSYGADRPGG--QDDCFKCGRPGHWARDC 108
RG ++ G G + D G ++ C++CG GH R+C
Sbjct: 93 NGRGPPPGTGRCFNCGVDGHWARDCQAGDWKNKCYRCGERGHIERNC 139
>gi|356552596|ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 178
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAIRE+ G+ G RV E+S + GGG G
Sbjct: 36 RPPGYAFIDFDDRRDAQDAIRELDGKN-GWRV------------ELSHNSRGGGGGRGGR 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G C++CG PGH+AR+C
Sbjct: 83 SGGSDLK-------CYECGEPGHFAREC 103
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ A+R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKSLDGKAIKVAQAT 85
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D KI+++R++GR RGF F+T+ +A+ ++ G++ R I VN A
Sbjct: 62 DAKIIVDRETGRSRGFAFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYA 109
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A
Sbjct: 34 SEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEAMNGKSVDGRQIRVDQA 83
>gi|449478559|ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 188
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAI+ + G+ G RV E+S + GGG
Sbjct: 36 RPPGYAFIEFDDRRDALDAIQALDGKN-GWRV------------ELSHNSKGGGGGGGRR 82
Query: 81 RGSYGADRPGGQDD--CFKCGRPGHWARDC 108
G GG DD C++CG PGH+AR+C
Sbjct: 83 GRGGGGGGGGGGDDLKCYECGEPGHFAREC 112
>gi|33239465|ref|NP_874407.1| RNA-binding protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33236990|gb|AAP99059.1| RNA-binding protein, RRM domain [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 252
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + LERD+GR RGF FI AD A AI + G E R + +NKA+P+
Sbjct: 29 NCSLPLERDTGRKRGFAFIEMADEAAEAAAIEALQGAELMGRPLRINKAEPR 80
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
D KI+++R++GR RGF F+T+ +A+ ++ G++ R I VN A
Sbjct: 62 DAKIIVDRETGRSRGFAFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYA 109
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64
+++ +RD+G+ RGFGF+++++ +A+ M G+E R I VN A + G
Sbjct: 67 RVITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANERPAG 119
>gi|448878405|gb|AGE46165.1| arginine/serine-rich splicing factor RS2Z37 transcript I
[Physcomitrella patens subsp. patens]
Length = 331
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 25 FGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 83
F F+ +AD R DDA ++G++F G+R+I E + G RG S G R
Sbjct: 78 FAFVEFADARDADDARHYVNGKDFDGNRLIV----------EFARRGPRGA--SGGAREY 125
Query: 84 YGADRPGGQDDCFKCGRPGHWARDC 108
G P G C+ CG GHWARDC
Sbjct: 126 LGRGPPPGTGRCYNCGNDGHWARDC 150
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++ ++R++G+ RGFG++ +A A++ A+ ++G+E R ++++K++ K
Sbjct: 327 RVQMDRNTGKSRGFGYVEFATTEAVEAALL-LNGKEIDGRPVNIDKSEQK 375
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + +R++G P+GFG++ +AD A+ M+G+E R I V+ + PK
Sbjct: 340 VSLPTDRETGAPKGFGYVEFADVDQATAALEAMNGKELSGRRIRVDYSGPK 390
>gi|448878276|gb|AGE46101.1| arginine/serine-rich splicing factor RSZ28 transcript I [Sorghum
bicolor]
gi|448878278|gb|AGE46102.1| arginine/serine-rich splicing factor RSZ28 transcript II [Sorghum
bicolor]
gi|448878280|gb|AGE46103.1| arginine/serine-rich splicing factor RSZ28 transcript III [Sorghum
bicolor]
gi|448878282|gb|AGE46104.1| arginine/serine-rich splicing factor RSZ28 transcript IV [Sorghum
bicolor]
Length = 246
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIRE+ G K G +V S+
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRELDG---------------KNGWKVE--------LSTKA 72
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G G DR G C++CG GH+AR+C
Sbjct: 73 GGGRGRDRNGSDMKCYECGESGHFAREC 100
>gi|226532353|ref|NP_001140388.1| uncharacterized protein LOC100272442 [Zea mays]
gi|194699276|gb|ACF83722.1| unknown [Zea mays]
gi|413937728|gb|AFW72279.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286699|gb|AGC79941.1| arginine/serine-rich splicing factor RSZ28IV [Zea mays]
Length = 141
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIRE+ G+ N + ++ +V R S
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRELDGK---------NGWRVELSTKVGGGRGRDRNGSDM- 85
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
C++CG GH+AR+C +G GG G
Sbjct: 86 -------------KCYECGEAGHFARECRLRIGS-GGLG 110
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 81
P GF F+ + D R +DA+R + GR R V + K R
Sbjct: 49 PPGFAFVEFEDARDAEDAVRGLDGRTICGRRARVELSTGK------------SARGYRSR 96
Query: 82 GSYGADRPGGQDDCFKCGRPGHWARDC 108
G G +D C++CG GH+ARDC
Sbjct: 97 GGRGRSPGRREDRCYECGNRGHFARDC 123
>gi|359807263|ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
gi|255625755|gb|ACU13222.1| unknown [Glycine max]
gi|255635722|gb|ACU18210.1| unknown [Glycine max]
Length = 178
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAIRE+ G+ G RV E+S + GGG G
Sbjct: 36 RPPGYAFIDFDDRRDAQDAIRELDGKN-GWRV------------ELSHNSRGGGGGRGGR 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G C++CG PGH+AR+C
Sbjct: 83 SGGSDLK-------CYECGEPGHFAREC 103
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D ++ +RD+GR RGFGF+ ++ A+ M+ +EF R I V+KA +
Sbjct: 30 DATVVKDRDTGRSRGFGFVRFSTDDEATAAMNAMNNQEFDGRQIRVDKATER 81
>gi|357137369|ref|XP_003570273.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 189
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + D+R +DA+R++ G+ +S N + G + G G S
Sbjct: 36 KPPGFAFIDFDDKRDAEDALRDLDGKNGWRVELSRNSSGRGGGRDGGGGGRDRHGGS--- 92
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGG 114
+ C++CG GH+AR+C +G
Sbjct: 93 -----------ESKCYECGESGHFARECRLRIGA 115
>gi|219887691|gb|ACL54220.1| unknown [Zea mays]
gi|413937734|gb|AFW72285.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286701|gb|AGC79942.1| arginine/serine-rich splicing factor RSZ28V [Zea mays]
Length = 231
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIRE+ G+ G RV ++ +V R S
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRELDGKN-GWRV--------ELSTKVGGGRGRDRNGSDM- 85
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
C++CG GH+AR+C +G GG G
Sbjct: 86 -------------KCYECGEAGHFARECRLRIGS-GGLG 110
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ ++++GR RGFGF+ Y DA+ M+G+ R I V++A
Sbjct: 34 VDVIRDKETGRSRGFGFVKYESVEDAKDAMTAMNGKSLDGRAIRVDEA 81
>gi|156061483|ref|XP_001596664.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980]
gi|154700288|gb|EDO00027.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 193
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 13 IMLERDSGRPRGFGFITY------ADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE 65
++ +RD+GR RGFGF+ + + + AI+EM+ EF R I V+KA + G +
Sbjct: 33 VVKDRDTGRSRGFGFVRFGQGSDSSPEADAEKAIQEMNSVEFDGRTIRVDKASERSGND 91
>gi|443286703|gb|AGC79943.1| arginine/serine-rich splicing factor RSZ28VI [Zea mays]
Length = 185
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIRE+ G+ G RV K G + + +
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRELDGKN-GWRVELSTKVGGGRGRDRNGSDMK-------- 86
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
C++CG GH+AR+C +G GG G
Sbjct: 87 --------------CYECGEAGHFARECRLRIGS-GGLG 110
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLTH---NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q T +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 21 LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQ 80
Query: 58 A 58
A
Sbjct: 81 A 81
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ ++++GR RGFGF+ Y + DA+ M+G+ R I V++A
Sbjct: 34 VDVIRDKETGRSRGFGFVKYDNAEDAKDALDAMNGKTLDGRAIRVDEA 81
>gi|361128417|gb|EHL00352.1| putative DNA-binding protein HEXBP [Glarea lozoyensis 74030]
Length = 1536
Score = 37.7 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 7/35 (20%)
Query: 76 YSSGGRGSYGADRPGGQDD--CFKCGRPGHWARDC 108
Y+ GGR + P G D C+KCG+PGH +RDC
Sbjct: 20 YNCGGR-----ECPEGPKDKTCYKCGQPGHISRDC 49
>gi|359476412|ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Vitis vinifera]
gi|296083786|emb|CBI24003.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAIRE+ G+ G + + G GG
Sbjct: 36 RPPGYAFIDFDDRRDAQDAIRELDGK----------------NGWRVELSHNSRGGGGGG 79
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
RG G C++CG PGH+AR+C
Sbjct: 80 RGGGRGRSGGSDLKCYECGEPGHFAREC 107
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 22 PRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG-GEVSDHGYRGGGYSSGG 80
P GF F+ Y D R DA+++M I +A+ ++ G+ G+RGGG GG
Sbjct: 67 PAGFAFVEYEDPRDASDAVKDMDSS-----TICGQRARVELSSGDSRRRGFRGGGGGGGG 121
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G P G C++CG GH+ARDC
Sbjct: 122 SFRGGRGPPRGDSKCYECGETGHFARDC 149
>gi|91202563|emb|CAJ72202.1| rna binding protein [Candidatus Kuenenia stuttgartiensis]
Length = 126
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ I+ ++ SG RGFGF+ R A+ ++G++ RV++VN+A P+
Sbjct: 30 VTIIKDKFSGESRGFGFVEMPSRAEAQAALDSLNGKDLNGRVLNVNEALPR 80
>gi|195649571|gb|ACG44253.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 255
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIRE+ G+ G RV K G + + +
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRELDGKN-GWRVELSTKVGGGRGRDRNGSDMK-------- 86
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
C++CG GH+AR+C +G GG G
Sbjct: 87 --------------CYECGEAGHFARECRLRIGS-GGLG 110
>gi|194688308|gb|ACF78238.1| unknown [Zea mays]
gi|194701410|gb|ACF84789.1| unknown [Zea mays]
gi|219886269|gb|ACL53509.1| unknown [Zea mays]
gi|223943153|gb|ACN25660.1| unknown [Zea mays]
gi|224028603|gb|ACN33377.1| unknown [Zea mays]
gi|238011236|gb|ACR36653.1| unknown [Zea mays]
gi|413937729|gb|AFW72280.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413937730|gb|AFW72281.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413937731|gb|AFW72282.1| splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413937732|gb|AFW72283.1| splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|413937733|gb|AFW72284.1| splicing factor, arginine/serine-rich 7 isoform 5 [Zea mays]
gi|443286693|gb|AGC79938.1| arginine/serine-rich splicing factor RSZ28I [Zea mays]
gi|443286695|gb|AGC79939.1| arginine/serine-rich splicing factor RSZ28II [Zea mays]
gi|443286697|gb|AGC79940.1| arginine/serine-rich splicing factor RSZ28III [Zea mays]
Length = 253
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + DRR DAIRE+ G+ G RV K G + + +
Sbjct: 36 KPPGFAFIDFDDRRDAQDAIRELDGKN-GWRVELSTKVGGGRGRDRNGSDMK-------- 86
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
C++CG GH+AR+C +G GG G
Sbjct: 87 --------------CYECGEAGHFARECRLRIGS-GGLG 110
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+++ +RD+G P+GFG++ ++ A++ M+G E R I V+ A PK
Sbjct: 322 VRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 373
>gi|302832365|ref|XP_002947747.1| glycine-rich RNA-binding protein-like protein [Volvox carteri f.
nagariensis]
gi|300267095|gb|EFJ51280.1| glycine-rich RNA-binding protein-like protein [Volvox carteri f.
nagariensis]
Length = 193
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
D + +R++GR RGFGF+T + A A E+ G EF R I VN+A P
Sbjct: 73 EDAFVATDRETGRSRGFGFVTL-ESSAARAAASEIDGTEFMGRTIKVNEATP 123
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 43 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 102
Query: 58 A 58
A
Sbjct: 103 A 103
>gi|156376723|ref|XP_001630508.1| predicted protein [Nematostella vectensis]
gi|156217531|gb|EDO38445.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60
++ K++ +R+SG RGFGF+ Y D + EM G E R + ++ A P
Sbjct: 501 SNAKVIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASP 552
>gi|146104187|ref|XP_001469754.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|398024252|ref|XP_003865287.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
gi|134074124|emb|CAM72866.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|322503524|emb|CBZ38610.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
Length = 271
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 78 SGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAG 119
SG +G YG DR C+KCG GH +RDCP+ GG GAG
Sbjct: 130 SGAQGGYGGDR-----TCYKCGDAGHISRDCPNGQGGYSGAG 166
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62
+++ +RD+G P+GFG++ ++ A++ M+G E R I V+ A PK
Sbjct: 325 VRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ I++++++G+ RGF F+ + D +D + + + +++ V KA PK
Sbjct: 146 DINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQ-HQLNGKMVDVKKALPK 196
>gi|168702594|ref|ZP_02734871.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 144
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+++ +R++GR RGFGF+ + D+AI ++ E+ R ++VN+A+P+
Sbjct: 34 QVVSDRETGRSRGFGFVEMSS--GADEAIAALNNAEYQGRRLTVNEAKPR 81
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ + A R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETSKSRGFAFVTFENPADAKAAARDMNGKSLDGKAIKVAQAT 85
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLTH---NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q T +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 21 LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQ 80
Query: 58 A 58
A
Sbjct: 81 A 81
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MQQCLTHNNDL---KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
+++ T D+ +++ +R+SGR RGFGF+++A+ A+ M G+E R I VN
Sbjct: 53 LKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNF 112
Query: 58 AQPK 61
A +
Sbjct: 113 ANER 116
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ ++++GR RGFGF+ Y + DA+ M+G+ R I V++A
Sbjct: 34 VDVIRDKETGRSRGFGFVKYDNSDDAKDALEGMNGKTLDGRAIRVDEA 81
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ I++++++G+ RGF F+ + D +D + + + +++ V KA PK
Sbjct: 145 DINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQ-HQLNGKMVDVKKALPK 195
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 AQPKMGGEVSDHGYRG 73
A E GYRG
Sbjct: 82 AGKS--SENRSRGYRG 95
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 18 DSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
DSGRP+GFG++ +A + + AI M G+E R + ++ + P+
Sbjct: 348 DSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTPR 391
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLTH---NNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q T +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 21 LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQ 80
Query: 58 A 58
A
Sbjct: 81 A 81
>gi|170030552|ref|XP_001843152.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167867828|gb|EDS31211.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 371
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 13 IMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
I+ E++SG+ RGFGF+ + D +D I + ++++ V KA PK
Sbjct: 146 IVTEKESGKKRGFGFVEFDDYDPVDKIILQ-KSHTIQNKMLDVKKALPK 193
>gi|163916618|gb|AAI57793.1| LOC100135403 protein [Xenopus (Silurana) tropicalis]
Length = 375
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ +M +R++ + RGF F+T+ DA RE++G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPADAKDAARELNGKALDGKPIKVEQA 84
>gi|293337151|ref|NP_001168362.1| uncharacterized protein LOC100382130 [Zea mays]
gi|223945609|gb|ACN26888.1| unknown [Zea mays]
gi|223947765|gb|ACN27966.1| unknown [Zea mays]
gi|413950152|gb|AFW82801.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
Length = 315
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVI-SVNKAQPKMGGEVSDH 69
++ L+RD + FI ++D R DDA + GR+ G R+I K P+ G D+
Sbjct: 29 EVELKRD------YAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEFAKGVPRGSGGSRDY 82
Query: 70 GYRGGG------YSSGGRGSYGADRPGG--QDDCFKCGRPGHWARDC 108
RG ++ G G + D G ++ C++CG GH R+C
Sbjct: 83 NGRGPPPGTGRCFNCGVDGHWARDCQAGDWKNKCYRCGERGHIERNC 129
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++A
Sbjct: 32 SEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLAMNGKSLDGRQIRVDQA 81
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 13 IMLERD--SGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
+ + RD +G PRGF F+ + D+R DDAI M G F R + + A+ +
Sbjct: 56 VYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRMDGEFFAGRELRIQYAKKR 106
>gi|332255488|ref|XP_003276864.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Nomascus
leucogenys]
Length = 157
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 9 NDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+++ ++ +R++ R RGFGFIT+ + A+R M+G R I V+ A
Sbjct: 33 SEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>gi|357436747|ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1 [Medicago truncatula]
Length = 190
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAIR++ G+ G RV E+S + GGG GG
Sbjct: 36 RPPGYAFIDFDDRRDAQDAIRDLDGKN-GWRV------------ELSHNSRSGGGGGGGG 82
Query: 81 RGSYGADRPGGQDD--CFKCGRPGHWARDC 108
G GG D C++CG PGH+AR+C
Sbjct: 83 GGRGRGGGGGGGSDLKCYECGEPGHFAREC 112
>gi|296422908|ref|XP_002841000.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637228|emb|CAZ85191.1| unnamed protein product [Tuber melanosporum]
Length = 332
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 12 KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
+IML+ + RGFGF+ A D A + G F R +S+ KA+
Sbjct: 124 QIMLDPHTKESRGFGFVKLATLDQADSAKEHLQGEVFEGRTLSIEKAR 171
>gi|5803137|ref|NP_006734.1| putative RNA-binding protein 3 [Homo sapiens]
gi|383872909|ref|NP_001244635.1| RNA binding motif (RNP1, RRM) protein 3 [Macaca mulatta]
gi|332860686|ref|XP_521047.2| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
troglodytes]
gi|332860688|ref|XP_003317502.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
troglodytes]
gi|397471359|ref|XP_003807263.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
paniscus]
gi|397471361|ref|XP_003807264.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
paniscus]
gi|402910082|ref|XP_003917720.1| PREDICTED: putative RNA-binding protein 3 [Papio anubis]
gi|426395802|ref|XP_004064149.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426395804|ref|XP_004064150.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Gorilla
gorilla gorilla]
gi|1710620|sp|P98179.1|RBM3_HUMAN RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3; AltName: Full=RNPL
gi|881954|gb|AAB17212.1| RNPL [Homo sapiens]
gi|13905080|gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
gi|119571152|gb|EAW50767.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|119571153|gb|EAW50768.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|380815298|gb|AFE79523.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815300|gb|AFE79524.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815302|gb|AFE79525.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420491|gb|AFH33459.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420493|gb|AFH33460.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948600|gb|AFI37905.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948602|gb|AFI37906.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|410228038|gb|JAA11238.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFIT+ + A+R M+G R I V+ A
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c
[Taeniopygia guttata]
Length = 175
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 A 58
A
Sbjct: 82 A 82
>gi|410255528|gb|JAA15731.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFIT+ + A+R M+G R I V+ A
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>gi|355757333|gb|EHH60858.1| RNA-binding motif protein 3 [Macaca fascicularis]
Length = 157
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
++ ++ +R++ R RGFGFIT+ + A+R M+G R I V+ A
Sbjct: 34 EVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>gi|357466537|ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medicago truncatula]
gi|355492601|gb|AES73804.1| Splicing factor arginine/serine-rich [Medicago truncatula]
Length = 199
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
RP G+ FI + DRR DAIRE+ G+ G RV + ++ GG G GGG G
Sbjct: 36 RPPGYAFIDFDDRRDALDAIRELDGKN-GWRVELSHNSKTGGGGGGRGGGGGGGGRGRSG 94
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
G C++CG PGH+AR+C
Sbjct: 95 GGGSDLK-------CYECGEPGHFAREC 115
>gi|195626508|gb|ACG35084.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 184
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + D+R +DAIR++ G+ G RV E+S + G G
Sbjct: 36 KPPGFAFIDFDDKRDAEDAIRDLDGKN-GWRV------------ELSRNASGGRGGRDRH 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
GS + C++CG GH+AR+C
Sbjct: 83 GGS--------ESKCYECGETGHFAREC 102
>gi|242092260|ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich splicing factor RSZ21 transcript I [Sorghum
bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich splicing factor RSZ21 transcript III [Sorghum
bicolor]
Length = 186
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + D+R +DAIR++ G+ G RV E+S + G G
Sbjct: 36 KPPGFAFIDFDDKRDAEDAIRDLDGKN-GWRV------------ELSRNASSGRGGRDRY 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
GS + C++CG GH+AR+C
Sbjct: 83 GGS--------ESKCYECGETGHFAREC 102
>gi|381217965|gb|AFG17059.1| vasa [Urechis unicinctus]
Length = 773
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Query: 95 CFKCGRPGHWARDCPSAVGGRGGA 118
CFKCG GH +RDCPS GG GGA
Sbjct: 195 CFKCGEEGHMSRDCPS--GGGGGA 216
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 A 58
A
Sbjct: 82 A 82
>gi|440800260|gb|ELR21299.1| uracilDNA glycosylase [Acanthamoeba castellanii str. Neff]
Length = 531
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 95 CFKCGRPGHWARDCPSA 111
C+KC GHWARDCPSA
Sbjct: 465 CYKCNETGHWARDCPSA 481
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ +R++ R RGFGF+T+ + DA+ M+G++ R+I V++A
Sbjct: 34 VDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQVDGRMIRVDEA 81
>gi|226497758|ref|NP_001149338.1| LOC100282961 [Zea mays]
gi|195607586|gb|ACG25623.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195611760|gb|ACG27710.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223942181|gb|ACN25174.1| unknown [Zea mays]
gi|223946575|gb|ACN27371.1| unknown [Zea mays]
gi|413952876|gb|AFW85525.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413952877|gb|AFW85526.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413952878|gb|AFW85527.1| Splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413952879|gb|AFW85528.1| Splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|448878146|gb|AGE46036.1| arginine/serine-rich splicing factor RSZ21 transcript I [Zea mays]
gi|448878148|gb|AGE46037.1| arginine/serine-rich splicing factor RSZ21 transcript II [Zea mays]
Length = 184
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 80
+P GF FI + D+R +DAIR++ G+ G RV E+S + G G
Sbjct: 36 KPPGFAFIDFDDKRDAEDAIRDLDGKN-GWRV------------ELSRNASGGRGGRDRH 82
Query: 81 RGSYGADRPGGQDDCFKCGRPGHWARDC 108
GS + C++CG GH+AR+C
Sbjct: 83 GGS--------ESKCYECGETGHFAREC 102
>gi|75076898|sp|Q4R813.1|HNRGT_MACFA RecName: Full=RNA-binding motif protein, X-linked-like-2;
AltName: Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
gi|67968804|dbj|BAE00759.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59
++ +M +R++ + RGF F+T+ A R+M+G+ + I V +A
Sbjct: 36 EVLLMKDRETNKSRGFAFVTFESPANAKAAARDMNGKSLDGKAIKVAQAT 85
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
++++ + DSG P+GFG+IT++ +A+ M G + G R + ++ A P+
Sbjct: 324 NVRLPTDMDSGNPKGFGYITFSSVEDAKNAMENMMGADVGGRPVRLDYATPR 375
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 MQQCLT---HNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 57
++Q + +++ ++ +R++ R RGFGF+T+ + DA+ M+G+ R I V++
Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81
Query: 58 A 58
A
Sbjct: 82 A 82
>gi|255076569|ref|XP_002501959.1| predicted protein [Micromonas sp. RCC299]
gi|226517223|gb|ACO63217.1| predicted protein [Micromonas sp. RCC299]
Length = 867
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 95 CFKCGRPGHWARDCPS 110
CF CG+ GHW RDCP+
Sbjct: 777 CFTCGQTGHWTRDCPN 792
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 95 CFKCGRPGHWARDCP 109
C KCG+ GHWARDCP
Sbjct: 817 CHKCGQLGHWARDCP 831
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 37.4 bits (85), Expect = 6.9, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 10 DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61
D+ I++++++G+ RGF F+ + D +D + + + +++ V KA PK
Sbjct: 2736 DINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQ-HQLNGKMVDVKKALPK 2786
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 11 LKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58
+ ++ ++++GR RGFGF+ Y + DA+ M+G+ R I V++A
Sbjct: 34 VDVIRDKETGRSRGFGFVKYDNAEDAKDALEGMNGKSVDGRTIRVDEA 81
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.143 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,331,887,794
Number of Sequences: 23463169
Number of extensions: 293543657
Number of successful extensions: 1240401
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6082
Number of HSP's successfully gapped in prelim test: 14058
Number of HSP's that attempted gapping in prelim test: 998899
Number of HSP's gapped (non-prelim): 138379
length of query: 255
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 116
effective length of database: 9,097,814,876
effective search space: 1055346525616
effective search space used: 1055346525616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)