Query 025249
Match_columns 255
No_of_seqs 361 out of 2210
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 06:37:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025249.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025249hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 1.5E-16 1.1E-20 117.9 8.3 62 1-62 28-89 (90)
2 d1whwa_ d.58.7.1 (A:) Probable 99.6 2.4E-16 1.8E-20 118.7 7.6 66 1-66 28-93 (99)
3 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 1.8E-16 1.3E-20 117.2 6.2 61 1-61 27-87 (88)
4 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 2.4E-16 1.8E-20 116.6 6.3 64 1-64 25-88 (89)
5 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 4.2E-16 3E-20 114.5 6.4 63 1-63 21-83 (85)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.6 3.1E-16 2.2E-20 113.9 5.4 60 1-60 22-81 (82)
7 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 4E-16 2.9E-20 116.5 5.3 63 1-63 29-91 (93)
8 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 7.7E-16 5.6E-20 111.6 6.5 60 1-60 22-81 (82)
9 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.6 6.8E-16 5E-20 112.3 5.8 64 1-64 18-82 (83)
10 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 5.9E-16 4.3E-20 112.3 5.3 60 1-60 20-79 (80)
11 d2cpza1 d.58.7.1 (A:383-484) C 99.6 9.4E-16 6.9E-20 116.3 6.4 64 1-64 38-101 (102)
12 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 1E-15 7.4E-20 121.7 6.5 65 1-65 62-126 (139)
13 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 1.5E-15 1.1E-19 113.3 7.0 63 1-63 27-89 (93)
14 d2cqga1 d.58.7.1 (A:96-185) TA 99.5 2.1E-15 1.5E-19 112.2 6.1 62 1-64 28-89 (90)
15 d1b7fa2 d.58.7.1 (A:205-289) S 99.5 2.4E-15 1.7E-19 110.1 6.0 58 1-58 26-85 (85)
16 d1p1ta_ d.58.7.1 (A:) Cleavage 99.5 1.4E-15 1E-19 115.3 4.8 63 1-63 28-90 (104)
17 d2cqda1 d.58.7.1 (A:1-103) RNA 99.5 3.9E-15 2.8E-19 113.0 7.3 62 1-63 30-91 (103)
18 d2cpfa1 d.58.7.1 (A:362-446) P 99.5 2.2E-15 1.6E-19 110.0 5.5 62 1-62 18-82 (85)
19 d1uawa_ d.58.7.1 (A:) Musashi- 99.5 1.6E-15 1.2E-19 109.6 4.2 57 1-58 20-76 (77)
20 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 4.6E-15 3.3E-19 113.0 6.9 63 1-64 40-102 (103)
21 d1fxla2 d.58.7.1 (A:119-203) H 99.5 3.2E-15 2.3E-19 109.6 5.6 58 1-58 26-85 (85)
22 d1no8a_ d.58.7.1 (A:) Nuclear 99.5 3.6E-15 2.6E-19 107.6 5.5 59 1-60 20-78 (78)
23 d2ghpa3 d.58.7.1 (A:206-291) U 99.5 3.3E-15 2.4E-19 109.7 5.2 61 1-62 25-86 (86)
24 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.5 3.6E-15 2.7E-19 110.0 5.0 64 1-64 25-88 (90)
25 d2cpha1 d.58.7.1 (A:454-547) P 99.5 6.8E-15 5E-19 109.9 6.4 63 1-63 28-92 (94)
26 d2cqca1 d.58.7.1 (A:109-191) A 99.5 6.2E-15 4.5E-19 107.3 5.7 55 1-55 29-83 (83)
27 d1cvja2 d.58.7.1 (A:91-179) Po 99.5 3.5E-15 2.6E-19 110.2 4.4 61 1-63 28-88 (89)
28 d2ghpa1 d.58.7.1 (A:116-196) U 99.5 4.6E-15 3.4E-19 107.4 4.9 60 1-60 21-80 (81)
29 d2cq3a1 d.58.7.1 (A:110-202) R 99.5 1.8E-14 1.3E-18 107.2 8.1 61 1-63 31-91 (93)
30 d2cq4a1 d.58.7.1 (A:132-232) R 99.5 3.8E-15 2.8E-19 113.0 4.2 60 1-61 38-97 (101)
31 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 1.1E-14 7.9E-19 106.7 6.2 58 1-59 26-83 (84)
32 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 5E-15 3.6E-19 106.2 4.2 57 1-58 19-75 (75)
33 d2cpia1 d.58.7.1 (A:101-189) E 99.5 4.8E-14 3.5E-18 104.2 8.2 56 1-56 31-89 (89)
34 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.5 3.6E-14 2.7E-18 104.8 6.6 61 1-63 28-88 (90)
35 d2cpea1 d.58.7.1 (A:353-453) R 99.5 3.5E-14 2.6E-18 106.4 6.5 64 1-64 28-99 (101)
36 d1x0fa1 d.58.7.1 (A:183-257) N 99.5 5.5E-15 4E-19 106.4 1.8 57 1-58 19-75 (75)
37 d1wf2a_ d.58.7.1 (A:) Heteroge 99.4 9.7E-14 7E-18 104.5 8.3 56 1-64 36-91 (98)
38 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.4 6E-14 4.4E-18 104.4 6.6 64 1-64 28-97 (98)
39 d1jmta_ d.58.7.3 (A:) d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.5e-16 Score=117.94 Aligned_cols=62 Identities=19% Similarity=0.437 Sum_probs=60.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|++|+.|++++|||||+|.+.++|++||++||+.+|.+++|.|++|+|+.
T Consensus 28 ~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~akp~~ 89 (90)
T d2cq0a1 28 LFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPST 89 (90)
T ss_dssp TSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESSCCC
T ss_pred HHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeeeCCC
Confidence 79999999999999999999999999999999999999999999999999999999999875
No 2
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=2.4e-16 Score=118.66 Aligned_cols=66 Identities=20% Similarity=0.325 Sum_probs=62.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~~~ 66 (255)
||++||+|++|+|++|+.|++++|||||+|.++++|++||++||+++|++++|+|++|+++.+...
T Consensus 28 ~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~~~~~~~ 93 (99)
T d1whwa_ 28 LFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQ 93 (99)
T ss_dssp HHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCCCSTTCC
T ss_pred HHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCccCC
Confidence 589999999999999999999999999999999999999999999999999999999998776543
No 3
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.62 E-value=1.8e-16 Score=117.20 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=59.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k 61 (255)
||++||+|++|+|++|+.|++++|||||+|.+.++|++||++||+.+|.+++|.|++|.++
T Consensus 27 ~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~~k 87 (88)
T d1rk8a_ 27 KFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVK 87 (88)
T ss_dssp HHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESEEC
T ss_pred HHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEecCC
Confidence 5899999999999999999999999999999999999999999999999999999999876
No 4
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.4e-16 Score=116.58 Aligned_cols=64 Identities=27% Similarity=0.354 Sum_probs=60.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|++|+|+.|+.|++++|||||+|.++++|++||++||+..|.+++|.|++|+|+..+
T Consensus 25 ~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p~~~k 88 (89)
T d2cqba1 25 AFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIK 88 (89)
T ss_dssp HHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCCCCCC
T ss_pred HHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999987543
No 5
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=4.2e-16 Score=114.54 Aligned_cols=63 Identities=21% Similarity=0.444 Sum_probs=60.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|++|+.|+++++||||+|.++++|++||+.||+++|.+++|.|++|.+...
T Consensus 21 ~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~~ 83 (85)
T d2u2fa_ 21 LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAK 83 (85)
T ss_dssp HHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCCC
T ss_pred HHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999987653
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.60 E-value=3.1e-16 Score=113.87 Aligned_cols=60 Identities=20% Similarity=0.431 Sum_probs=58.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|++|+|++++.|+++++||||+|.++++|++||+.||+.+|.+++|.|++|+|
T Consensus 22 ~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 22 LFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp HHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 589999999999999999999999999999999999999999999999999999999986
No 7
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=4e-16 Score=116.52 Aligned_cols=63 Identities=22% Similarity=0.301 Sum_probs=60.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|++|+.|++++|||||+|.+.++|++||++||+++|.+++|+|++|+++..
T Consensus 29 ~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~~~~ 91 (93)
T d1x5ua1 29 LFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNK 91 (93)
T ss_dssp HHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTTTSC
T ss_pred HHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999998753
No 8
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=7.7e-16 Score=111.56 Aligned_cols=60 Identities=23% Similarity=0.527 Sum_probs=58.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|++|+|++|+.+++++|||||+|.++++|++||++||++.|.+++|.|++|+|
T Consensus 22 ~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 22 LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp HHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 589999999999999999999999999999999999999999999999999999999987
No 9
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=6.8e-16 Score=112.35 Aligned_cols=64 Identities=31% Similarity=0.419 Sum_probs=59.4
Q ss_pred CCCCCccceEE-EEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDL-KIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V-~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|+++ .|++++.|++++|||||+|.++++|++||++||+++|.+++|.|++|.++..+
T Consensus 18 ~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~~k 82 (83)
T d1x5ta1 18 TFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 82 (83)
T ss_dssp HHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCCCC
T ss_pred HHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCCcC
Confidence 58999999875 78999999999999999999999999999999999999999999999987654
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=5.9e-16 Score=112.27 Aligned_cols=60 Identities=8% Similarity=0.136 Sum_probs=57.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|++|+|++|+.|+++++||||+|.++++|++||++||++.|.+++|+|++|+.
T Consensus 20 ~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 20 KFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred HHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 589999999999999999999999999999999999999999999999999999999963
No 11
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=9.4e-16 Score=116.29 Aligned_cols=64 Identities=20% Similarity=0.404 Sum_probs=61.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|++|+|+.++.|+++||||||+|.++++|++||++||+++|.+++|+|++|+++.+.
T Consensus 38 ~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~~k~~~ 101 (102)
T d2cpza1 38 MFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDS 101 (102)
T ss_dssp HHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCCCSCCC
T ss_pred HHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeCCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999988654
No 12
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.57 E-value=1e-15 Score=121.69 Aligned_cols=65 Identities=18% Similarity=0.369 Sum_probs=61.3
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE 65 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~~ 65 (255)
||++||+|++|+|+.|+.|++++|||||+|.+.++|++||+.||+++|++++|+|++|+++..+.
T Consensus 62 ~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~~~~~p 126 (139)
T d1u6fa1 62 LFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAASGHQRP 126 (139)
T ss_dssp HHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSCCCCCC
T ss_pred HHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999998776553
No 13
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.5e-15 Score=113.29 Aligned_cols=63 Identities=19% Similarity=0.313 Sum_probs=59.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|.|++++.|++++|||||+|.+.++|++||+.||+.+|++++|.|++|.+..+
T Consensus 27 ~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~~~~~ 89 (93)
T d1h2vz_ 27 LFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKE 89 (93)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEESCCCT
T ss_pred HHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999976543
No 14
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.1e-15 Score=112.17 Aligned_cols=62 Identities=13% Similarity=0.275 Sum_probs=57.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
+|++||+|++|+|++|+.|++++|||||+|.++++|++||+++| .|+|+.|.|++|.+++..
T Consensus 28 ~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~--~l~Gr~i~v~~a~~k~~~ 89 (90)
T d2cqga1 28 YFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH--MIDGRWCDCKLPNSKQSQ 89 (90)
T ss_dssp HHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCE--EETTEEEEEECCCTTCCC
T ss_pred HHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCC--ccCCEEeEEEeCCCCCCC
Confidence 58999999999999999999999999999999999999999655 899999999999987654
No 15
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.55 E-value=2.4e-15 Score=110.12 Aligned_cols=58 Identities=24% Similarity=0.367 Sum_probs=55.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCC--eEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGD--RVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~G--r~I~V~~A 58 (255)
||++||+|++|+|++|+.|++++|||||+|.++++|++||+.||+..|.+ ++|.|++|
T Consensus 26 ~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 26 IFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp HHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 58999999999999999999999999999999999999999999999987 88999987
No 16
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.4e-15 Score=115.30 Aligned_cols=63 Identities=27% Similarity=0.642 Sum_probs=59.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|++++.|++++|||||+|.+.++|++||++||+++|.+++|+|++|.++..
T Consensus 28 ~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~~~ 90 (104)
T d1p1ta_ 28 IFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKN 90 (104)
T ss_dssp HHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCTTH
T ss_pred hhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999987643
No 17
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.9e-15 Score=113.01 Aligned_cols=62 Identities=26% Similarity=0.414 Sum_probs=57.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|++|+.|++++|||||+|.++++|++||+.||. +|++++|.|++|.++..
T Consensus 30 ~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~~~~ 91 (103)
T d2cqda1 30 YFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAYLGAK 91 (103)
T ss_dssp HHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEESTTTCC
T ss_pred HHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcCCCCC
Confidence 589999999999999999999999999999999999999998875 89999999999986544
No 18
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=2.2e-15 Score=110.05 Aligned_cols=62 Identities=15% Similarity=0.327 Sum_probs=56.9
Q ss_pred CCCCCccceEEEEeecCCCC---CCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSG---RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg---~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|++++.+. ++||||||+|+++++|++||++||+++|++++|.|++|+++.
T Consensus 18 ~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~~~ 82 (85)
T d2cpfa1 18 VFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERAT 82 (85)
T ss_dssp HHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSCSS
T ss_pred HHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 58999999999999998775 468999999999999999999999999999999999997644
No 19
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.6e-15 Score=109.56 Aligned_cols=57 Identities=23% Similarity=0.410 Sum_probs=54.8
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
+|++||+|++|+|++|+.|+++||||||+|.++++|++||+ ||+++|++++|.|++|
T Consensus 20 ~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 20 YFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp HHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred HHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 58999999999999999999999999999999999999997 7999999999999987
No 20
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=4.6e-15 Score=113.01 Aligned_cols=63 Identities=24% Similarity=0.399 Sum_probs=59.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|+.|.|++|+.|++++|||||+|.+.++|++||+ |++++|+++.|.|++|.++.+.
T Consensus 40 ~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ke~~ 102 (103)
T d1x4ba1 40 YYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVAREES 102 (103)
T ss_dssp HHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSSCCCC
T ss_pred HHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcccCCC
Confidence 58999999999999999999999999999999999999996 8999999999999999988754
No 21
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.2e-15 Score=109.63 Aligned_cols=58 Identities=24% Similarity=0.436 Sum_probs=54.8
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCC--eEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGD--RVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~G--r~I~V~~A 58 (255)
||++||+|++|+|++|+.|+++++||||+|.++++|++||++||+++|.+ ++|+|++|
T Consensus 26 ~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 26 LFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 58999999999999999999999999999999999999999999999997 55999886
No 22
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=3.6e-15 Score=107.60 Aligned_cols=59 Identities=14% Similarity=0.261 Sum_probs=55.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|++|+|+.++ +++++|||||+|.++++|++||++||+++|.+++|+|++|..
T Consensus 20 ~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 20 LFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp HHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred HHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 58899999999999985 899999999999999999999999999999999999999863
No 23
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.52 E-value=3.3e-15 Score=109.75 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=53.8
Q ss_pred CCCCCccceEEEEeec-CCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLE-RDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~D-k~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|+.+ +++++++|||||+|.+.++|++||+ ||+++|.+++|.|++|++++
T Consensus 25 ~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a~~kP 86 (86)
T d2ghpa3 25 SFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSLADKKP 86 (86)
T ss_dssp HHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEECCCCC
T ss_pred HHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEcCCCC
Confidence 5899999999999764 6789999999999999999999996 99999999999999999874
No 24
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=3.6e-15 Score=109.99 Aligned_cols=64 Identities=25% Similarity=0.494 Sum_probs=60.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|+.|.++.++.+++++|||||+|.++++|++||+.||+++|.+++|.|++|.++...
T Consensus 25 ~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~~~~~ 88 (90)
T d1x5sa1 25 VFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDN 88 (90)
T ss_dssp HHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEECCCCC
T ss_pred hhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCCC
Confidence 5889999999999999999999999999999999999999999999999999999999887653
No 25
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=6.8e-15 Score=109.85 Aligned_cols=63 Identities=16% Similarity=0.380 Sum_probs=58.2
Q ss_pred CCCCCccceEEEEeecCC-CCCCCcEEEEEeCCHHHHHHHHHHh-cCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERD-SGRPRGFGFITYADRRAMDDAIREM-HGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~-Tg~srGfaFVtF~~~e~a~~AI~~l-nG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|++++. |++++|||||+|.++++|++||+.| |+.+|.+++|.|++|+++..
T Consensus 28 ~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~~~~ 92 (94)
T d2cpha1 28 LFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVT 92 (94)
T ss_dssp HHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCCCCC
T ss_pred HHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCCCCC
Confidence 589999999999999854 8999999999999999999999998 89999999999999987654
No 26
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=6.2e-15 Score=107.27 Aligned_cols=55 Identities=25% Similarity=0.432 Sum_probs=53.3
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEE
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISV 55 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V 55 (255)
||++||+|++|+|++|+.|+++++||||+|.++++|++||++||+++|++++|+|
T Consensus 29 ~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 29 VFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp HHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred HHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 5899999999999999999999999999999999999999999999999999987
No 27
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.5e-15 Score=110.19 Aligned_cols=61 Identities=20% Similarity=0.437 Sum_probs=56.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|+.++.+ ++|||||+|+++++|++||++||+++|.+++|.|++|+++.+
T Consensus 28 ~F~~~G~v~~~~i~~~~~~--~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~~ 88 (89)
T d1cvja2 28 TFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 88 (89)
T ss_dssp HHHTTSCEEEEEECCBTTB--CCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTTT
T ss_pred HHHhcCCceEEEEEeecCC--CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCC
Confidence 5899999999999998654 789999999999999999999999999999999999998764
No 28
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.51 E-value=4.6e-15 Score=107.37 Aligned_cols=60 Identities=10% Similarity=0.156 Sum_probs=51.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|+.+.++.++.++++++||||+|.++++|++||+.||+++|.+++|.|++|+|
T Consensus 21 ~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 21 LLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp HHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred HHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 588999999999999999999999999999999999999999999999999999999987
No 29
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.8e-14 Score=107.22 Aligned_cols=61 Identities=28% Similarity=0.495 Sum_probs=56.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|+.++.+ +++||||+|.++++|++||+.||+.+|.+++|.|++|+++..
T Consensus 31 ~F~~~G~v~~v~~~~~~~~--~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~r~~ 91 (93)
T d2cq3a1 31 MFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVM 91 (93)
T ss_dssp HGGGTSCEEEEEEECCTTT--TCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCSSCC
T ss_pred HHhhcceeeeccccccccC--CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCcCCC
Confidence 6899999999999998654 789999999999999999999999999999999999998764
No 30
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=3.8e-15 Score=113.02 Aligned_cols=60 Identities=20% Similarity=0.414 Sum_probs=57.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k 61 (255)
||++||+|++|+|++|+.|+++||||||+|.++++|++||+ ||+++|.++.|.|++|+++
T Consensus 38 ~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~~ 97 (101)
T d2cq4a1 38 FFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQAE 97 (101)
T ss_dssp HHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHHH
T ss_pred HHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCCC
Confidence 58999999999999999999999999999999999999995 9999999999999998764
No 31
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.1e-14 Score=106.65 Aligned_cols=58 Identities=28% Similarity=0.453 Sum_probs=55.3
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~ 59 (255)
+|++||+|++|+|++|+.|++++|||||+|.++++|++||+ ++++.|+|++|+|+.|.
T Consensus 26 ~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 26 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred HHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 58999999999999999999999999999999999999997 68899999999999986
No 32
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=5e-15 Score=106.20 Aligned_cols=57 Identities=23% Similarity=0.473 Sum_probs=54.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
+|++||+|++|.|++|+.|++++|||||+|.++++|++||+ +++++|+|+.|.|+.|
T Consensus 19 ~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 19 YFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp HHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred HHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 58999999999999999999999999999999999999997 7999999999999765
No 33
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=4.8e-14 Score=104.22 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=51.9
Q ss_pred CCCCCccceEEEEeecCCCCCC---CcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEE
Q 025249 1 MQQCLTHNNDLKIMLERDSGRP---RGFGFITYADRRAMDDAIREMHGREFGDRVISVN 56 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~s---rGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~ 56 (255)
||++||+|++|.|++++.|+.+ ++||||+|+++++|++||++||+++|.++.|+|+
T Consensus 31 ~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 31 YFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp TTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred HhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 5999999999999999887655 4999999999999999999999999999999985
No 34
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=3.6e-14 Score=104.81 Aligned_cols=61 Identities=20% Similarity=0.322 Sum_probs=56.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|+.|+.+. ++||||+|.+.++|++||+.||+++|.++.|+|++|+++..
T Consensus 28 ~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~~~~ 88 (90)
T d2cqia1 28 LFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSS 88 (90)
T ss_dssp HHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCCTTC
T ss_pred HHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCCCC
Confidence 58999999999999997765 68999999999999999999999999999999999987654
No 35
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=3.5e-14 Score=106.37 Aligned_cols=64 Identities=20% Similarity=0.362 Sum_probs=58.6
Q ss_pred CCCCCccce--------EEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNN--------DLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~--------~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|. .+.++++++|+++++||||+|.++++|++||++||+++|++++|.|++|++++.+
T Consensus 28 ~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~~a~~~~p~ 99 (101)
T d2cpea1 28 FFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPM 99 (101)
T ss_dssp HHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTEECEEECSSCCCCS
T ss_pred HHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCCC
Confidence 588999874 5788889999999999999999999999999999999999999999999987654
No 36
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=5.5e-15 Score=106.38 Aligned_cols=57 Identities=14% Similarity=0.313 Sum_probs=53.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
+|++||+|++|+|++|+.|++++|||||+|.++++|++||+ ++.++|+++.|+|++|
T Consensus 19 ~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 19 YFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp HHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred HHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 58899999999999999999999999999999999999997 5778999999999876
No 37
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=9.7e-14 Score=104.47 Aligned_cols=56 Identities=20% Similarity=0.335 Sum_probs=51.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|++|+|. |+||||+|+++++|++||++||+++|.+++|.|++|.++...
T Consensus 36 ~F~~~G~i~~~~i~--------rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~~~ 91 (98)
T d1wf2a_ 36 IFSKYGKIVGCSVH--------KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVN 91 (98)
T ss_dssp SSTTSSCEEEEEEE--------TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCCCC
T ss_pred HHhhcCCEEEEEEe--------CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCCC
Confidence 79999999999983 589999999999999999999999999999999999865443
No 38
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=6e-14 Score=104.37 Aligned_cols=64 Identities=16% Similarity=0.314 Sum_probs=59.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhc------CCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH------GREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~ln------G~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|++|.|+.++.+++++|||||+|.++++|++||+.|| +.+|.+++|+|++|.++.+.
T Consensus 28 ~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~~k~~a 97 (98)
T d1x4ha1 28 VLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVTRDEA 97 (98)
T ss_dssp HHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCCCCCCC
T ss_pred HHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECCCCCcC
Confidence 58999999999999999999999999999999999999999887 57789999999999987653
No 39
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=3.6e-14 Score=108.22 Aligned_cols=57 Identities=11% Similarity=0.226 Sum_probs=53.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
||++||+|++|+|+++ .|++++|||||+|+++++|++||++||++.|++++|+|+++
T Consensus 47 ~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 47 MEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred HhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 4789999999999877 68999999999999999999999999999999999999875
No 40
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=7.5e-14 Score=100.24 Aligned_cols=57 Identities=26% Similarity=0.429 Sum_probs=54.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
+|++||+|+.++|+.++.|++++|||||+|.+++++++||+ ||+++|+|++|+|+.|
T Consensus 22 ~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 22 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp HHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred HHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 58999999999999999999999999999999999999986 8999999999999987
No 41
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=3.5e-14 Score=100.82 Aligned_cols=57 Identities=23% Similarity=0.538 Sum_probs=54.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
+|++||+|+.|.|++++.|+++++||||+|.++++|++||+ ||+++|++++|+|++|
T Consensus 19 ~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 19 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp HHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred HHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 58999999999999999999999999999999999999997 9999999999999987
No 42
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.6e-14 Score=108.57 Aligned_cols=64 Identities=17% Similarity=0.297 Sum_probs=60.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|+.|.|+.++.++++++||||+|.+.++|++||+.||+.+|.+++|.|++|+++..+
T Consensus 38 ~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak~k~~r 101 (102)
T d2cpxa1 38 LFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKNKKQR 101 (102)
T ss_dssp HTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECCCCSCC
T ss_pred HHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCCCcccC
Confidence 5889999999999999899999999999999999999999999999999999999999987654
No 43
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.4e-13 Score=99.23 Aligned_cols=56 Identities=23% Similarity=0.320 Sum_probs=51.9
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|.++ ++||||+|++.++|++||++||+.+|++++|+|++|++++
T Consensus 23 ~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 23 AFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp HHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred HHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 5899999999999764 5799999999999999999999999999999999998764
No 44
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=3.5e-13 Score=101.64 Aligned_cols=64 Identities=19% Similarity=0.397 Sum_probs=55.3
Q ss_pred CCCCCccceEEEEeecC-CCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCCCC
Q 025249 1 MQQCLTHNNDLKIMLER-DSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk-~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~~~ 66 (255)
||++|| |++|.|+.++ .+++++|||||+|.++++|++|| +||+++|++++|+|++|.++.....
T Consensus 35 ~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~~~~~~~~ 99 (104)
T d1wi8a_ 35 FFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVADQAQDKDS 99 (104)
T ss_dssp HTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEECCCCCCCCC
T ss_pred HHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEECCCCCCCCC
Confidence 589998 7888888775 47899999999999999998777 4999999999999999998766543
No 45
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=1.6e-13 Score=102.84 Aligned_cols=57 Identities=12% Similarity=0.313 Sum_probs=53.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|+.+ |+||||+|.++++|++||++||+++|.+++|+|++|++++.
T Consensus 38 ~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p~ 94 (96)
T d1x4ga1 38 TFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 94 (96)
T ss_dssp HHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCCS
T ss_pred HHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCC
Confidence 5899999999999976 68999999999999999999999999999999999987654
No 46
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=1e-13 Score=105.12 Aligned_cols=57 Identities=12% Similarity=0.251 Sum_probs=52.8
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|+++ ++|||||+|+++++|++||+.||++.|.+++|+|++|+.+.
T Consensus 23 ~F~~fG~I~~v~i~~~-----~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 23 LFGVYGDVQRVKILFN-----KKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp HHHHHTCEEEEEECCT-----TSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred HHhhccccceEEEEec-----ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 6899999999999997 37899999999999999999999999999999999997543
No 47
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=1.3e-13 Score=97.36 Aligned_cols=54 Identities=15% Similarity=0.355 Sum_probs=51.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEE
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVIS 54 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~ 54 (255)
||++||+|+.++|++++.|+++++||||+|.++++|++||+.||+++|+++.|+
T Consensus 18 ~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 18 LCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp TSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred HHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999999999999999999999999998763
No 48
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=2.8e-13 Score=103.69 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=53.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k 61 (255)
||++||+|++|+|+.+ +.++|||||+|.+.++|++||++||+++|.++.|.|.+|.++
T Consensus 27 ~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~ 84 (114)
T d2f9da1 27 IFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNAN 84 (114)
T ss_dssp HHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHH
T ss_pred HHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 6899999999999865 456899999999999999999999999999999999998754
No 49
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=5.6e-13 Score=97.73 Aligned_cols=56 Identities=20% Similarity=0.271 Sum_probs=52.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|+++ ++||||+|++.++|++||++||+.+|.+++|+|++|.++.
T Consensus 28 ~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 28 LFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp HTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred HHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 6999999999999875 5799999999999999999999999999999999998764
No 50
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.34 E-value=4.6e-14 Score=104.84 Aligned_cols=59 Identities=20% Similarity=0.399 Sum_probs=54.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k 61 (255)
||++||+|+.|+|+.+ .|++++|||||+|+++++|++||+ ||+++|.+++|.|++|++|
T Consensus 33 ~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~k 91 (91)
T d1fjeb1 33 AISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKGR 91 (91)
T ss_dssp HHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCCS
T ss_pred HHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCCC
Confidence 5889999999998754 789999999999999999999996 9999999999999999864
No 51
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=7.2e-13 Score=98.60 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=52.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k 61 (255)
||++||+|+.|+|+.+ ..+++||||+|+++++|++||++||+++|.+++|+|++|++.
T Consensus 34 ~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 34 VFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp HHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred HHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 6899999999988654 357899999999999999999999999999999999999864
No 52
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=3.3e-13 Score=101.69 Aligned_cols=59 Identities=19% Similarity=0.306 Sum_probs=55.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|+.|.|+.+ .++++++||||+|.++++|++||++||+++|.+++|.|..++|
T Consensus 38 ~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 38 MLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp TTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred HHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 7999999999999988 5889999999999999999999999999999999998887765
No 53
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.31 E-value=5.6e-13 Score=97.14 Aligned_cols=58 Identities=14% Similarity=0.244 Sum_probs=52.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
||+.|+.|..+.++.+..+++++|||||+|.++++|++||++||+++|.+++|+|++|
T Consensus 29 ~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 29 FFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp HTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred HHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 5889999988655555688999999999999999999999999999999999999976
No 54
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=3e-13 Score=99.96 Aligned_cols=60 Identities=20% Similarity=0.324 Sum_probs=54.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
+|++||+|++|+|+. |+++++||||+|++.++|++||++||+.+|.++.|.|.+|+++.+
T Consensus 27 ~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak~~~~ 86 (91)
T d1nu4a_ 27 IFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSD 86 (91)
T ss_dssp HHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECSSCCT
T ss_pred HhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeCCCch
Confidence 479999999998865 456789999999999999999999999999999999999987653
No 55
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=7e-13 Score=98.74 Aligned_cols=65 Identities=25% Similarity=0.343 Sum_probs=56.3
Q ss_pred CCCCCcc-ceEEEEeecC-CCCCCCcEEEEEeCCHHHHHHHHHHhcC--CeeCCeEEEEEecccCCCCC
Q 025249 1 MQQCLTH-NNDLKIMLER-DSGRPRGFGFITYADRRAMDDAIREMHG--REFGDRVISVNKAQPKMGGE 65 (255)
Q Consensus 1 lfekFG~-I~~V~Iv~Dk-~Tg~srGfaFVtF~~~e~a~~AI~~lnG--~~i~Gr~I~V~~A~~k~~~~ 65 (255)
||++||+ |++|.|+++. .+++++|||||+|.++++|++||+.|+. ..+.++.|.|++|+|+.+..
T Consensus 21 ~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~p~~~~~ 89 (96)
T d2disa1 21 EIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVD 89 (96)
T ss_dssp HHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEESCSSCSTT
T ss_pred HHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEcCCCCCCC
Confidence 5889996 8999999985 4689999999999999999999999864 45679999999999877654
No 56
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.4e-12 Score=95.42 Aligned_cols=57 Identities=5% Similarity=0.068 Sum_probs=52.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~ 59 (255)
+|++||+|++|+|+.+ .+++++|||||+|.++++|++||+ +++++|.+++|.|.++.
T Consensus 26 ~F~~~G~v~~v~l~~~-~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 26 WLEDKGQVLNIQMRRT-LHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HHTTSCCEEEEEEEEC-TTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred HHHHhcccccceeeee-ccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 5899999999999887 588999999999999999999996 79999999999998864
No 57
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.28 E-value=1.1e-12 Score=99.74 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=53.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|++|++++ +++||||+|+++++|++||++||+++|.++.|+|.+|+++...
T Consensus 30 lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~~~ 87 (104)
T d1weya_ 30 LFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHIG 87 (104)
T ss_dssp HHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSSCC
T ss_pred HhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCCCC
Confidence 689999999999985 4679999999999999999999999999999999999876544
No 58
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=8.2e-13 Score=95.46 Aligned_cols=58 Identities=19% Similarity=0.321 Sum_probs=51.9
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCC-eeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGR-EFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~-~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||.|+++++++. ++||||+|.+.++|++||++||+. +|.+++|.|++|.|+..+
T Consensus 21 ~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 21 LFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp HHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred HHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 5889999998888764 689999999999999999999985 699999999999987654
No 59
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=5.4e-13 Score=97.82 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=51.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|++|+|+++ |||||+|++.++|++||++||+.+|.++.|.|.+++++...
T Consensus 20 ~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~~~ 76 (87)
T d3begb1 20 HMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDG 76 (87)
T ss_dssp HHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEECC
T ss_pred HHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCcCC
Confidence 6899999999999775 89999999999999999999999999999999888765544
No 60
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=4.6e-12 Score=92.26 Aligned_cols=57 Identities=16% Similarity=0.315 Sum_probs=51.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||.|..+.+.. +++||||+|.++++|++||++||+++|.+++|.|++|+|+..
T Consensus 28 ~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~ 84 (86)
T d2cpda1 28 EFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 84 (86)
T ss_dssp HHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCC
T ss_pred hhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCC
Confidence 588999998887754 578999999999999999999999999999999999998654
No 61
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.6e-12 Score=95.49 Aligned_cols=59 Identities=19% Similarity=0.226 Sum_probs=51.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEV 66 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~~~ 66 (255)
||++||+|++|+++.+ +++||||+|+++++|++||+ ++++|++++|.|++|+++.....
T Consensus 25 ~F~~~G~v~~v~~~~~-----~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~~~~ 83 (88)
T d1wf0a_ 25 FFSQYGDVMDVFIPKP-----FRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHNSNS 83 (88)
T ss_dssp HSTTTSCCCEEECCSS-----CCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCCCCS
T ss_pred HHHHcCCceEEEEeec-----cCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCCCCC
Confidence 6999999999987654 67899999999999999986 67899999999999998775543
No 62
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.25 E-value=1.9e-12 Score=98.13 Aligned_cols=56 Identities=7% Similarity=-0.009 Sum_probs=50.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|.|+. +++||||+|.++++|++||++||+++|.+++|.|++|....
T Consensus 30 ~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 30 TFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp HHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred hhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 689999999998854 57899999999999999999999999999999999987543
No 63
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=2.8e-12 Score=97.47 Aligned_cols=59 Identities=8% Similarity=0.049 Sum_probs=52.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeC--CeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFG--DRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~--Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|.|+.++ +++||||+|+++++|++||++||+++|. +++|.|.+++++..
T Consensus 27 ~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~~~ 87 (108)
T d2adba1 27 IFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSL 87 (108)
T ss_dssp HHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSCSC
T ss_pred HHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCccc
Confidence 69999999999999874 5799999999999999999999999984 78899999887553
No 64
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=4.2e-12 Score=95.64 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=53.8
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++|+ |++|.|+++ .+++++|||||+|.++++|++||+ ||+++|.++.|+|.++.++...
T Consensus 35 ~F~~~~-~~~v~~~~~-~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~~~~~ 95 (102)
T d1weza_ 35 FFSPLN-PMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNSTAGTS 95 (102)
T ss_dssp SSCSCC-CSEEEEEES-SSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEECCCCCC
T ss_pred HHhccC-cceeeeEEe-cCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcCCCCCC
Confidence 689996 668888887 467899999999999999999986 8999999999999999876544
No 65
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.25 E-value=1.7e-12 Score=97.46 Aligned_cols=58 Identities=12% Similarity=0.158 Sum_probs=52.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGE 65 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~~ 65 (255)
||++||+|+.|+|++ ++||||+|.++++|++||++||+.+|+++.|+|.+++++....
T Consensus 35 ~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~~~~ 92 (98)
T d1wg4a_ 35 HMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPERS 92 (98)
T ss_dssp HHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEECCCS
T ss_pred HHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCCCCC
Confidence 589999999999875 4899999999999999999999999999999999998766543
No 66
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=6.4e-12 Score=94.83 Aligned_cols=63 Identities=19% Similarity=0.250 Sum_probs=57.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++|+.|+.+.++.++.+++++|||||+|.++++|++||+ ||++.|.++.|.|.++.+++..
T Consensus 35 ~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~~~~~~ 97 (104)
T d1wg5a_ 35 FFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSSRAEVR 97 (104)
T ss_dssp HTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEECTTTSC
T ss_pred HHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECCHHHhc
Confidence 58999999998888888899999999999999999999996 9999999999999999877544
No 67
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.23 E-value=3e-12 Score=95.31 Aligned_cols=59 Identities=17% Similarity=0.327 Sum_probs=51.5
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++||+|..|+ .++++++||||+|.+.++|++||++||+++|.+++|.|++|.++...
T Consensus 36 ~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~~ 94 (96)
T d1fjca_ 36 VFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGGT 94 (96)
T ss_dssp HHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCCC
T ss_pred HHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCCC
Confidence 578888776553 36678999999999999999999999999999999999999987653
No 68
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.22 E-value=4.8e-12 Score=91.77 Aligned_cols=54 Identities=7% Similarity=0.244 Sum_probs=49.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeC-CeEEEEEecc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFG-DRVISVNKAQ 59 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~-Gr~I~V~~A~ 59 (255)
||++||+|++|+|+++ .++||||+|.+.++|++||+.||+.+|. ++.|.|++|+
T Consensus 28 ~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 28 LFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp HHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred hhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 5899999999999875 4689999999999999999999999985 6899999986
No 69
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.1e-11 Score=93.18 Aligned_cols=58 Identities=21% Similarity=0.339 Sum_probs=53.1
Q ss_pred CCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 2 QQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 2 fekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
|++||+|++|+|+.+ .++|||||+|+++++|++||+.||+..|++++|.|+++.++..
T Consensus 40 ~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~~~ 97 (99)
T d2dita1 40 CSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTD 97 (99)
T ss_dssp GGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCEETTEECEEEECCSCCC
T ss_pred hcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCcCC
Confidence 789999999998776 3679999999999999999999999999999999999988754
No 70
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=3.3e-12 Score=96.09 Aligned_cols=59 Identities=12% Similarity=0.254 Sum_probs=53.3
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||+.||.|+.+.++.+..+++++|||||+|.++++|++||+ ||++.|+++.|.|..+..
T Consensus 28 ~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 28 FLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp HTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred hhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 58999999886666666899999999999999999999996 999999999999998764
No 71
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=8e-12 Score=91.33 Aligned_cols=57 Identities=9% Similarity=0.139 Sum_probs=50.3
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCee-CCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREF-GDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i-~Gr~I~V~~A~~k 61 (255)
||++||+|+++.++.. +.++||||+|+++++|++||++||+..| ++++|+|+++++.
T Consensus 30 ~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 30 LFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp HHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred HhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 5899999999887664 3578999999999999999999999998 5899999999864
No 72
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.6e-11 Score=90.16 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=47.7
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 64 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~~ 64 (255)
||++|| |+.+.+. ++|+||||+|.++++|++||++||+++|.+++|.|+++..+...
T Consensus 25 lF~~~G-~~~~~~~------~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~~~ 81 (88)
T d1wg1a_ 25 LLKDYD-LKYCYVD------RNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALL 81 (88)
T ss_dssp HTCSSC-CCCEEEE------GGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCCCC
T ss_pred HHHhcC-ceeeeee------ccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCCCC
Confidence 689999 3334443 36789999999999999999999999999999999999766543
No 73
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.19 E-value=9.5e-12 Score=88.81 Aligned_cols=56 Identities=14% Similarity=0.046 Sum_probs=50.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~ 59 (255)
||++||+|+.|+|+.++.+ .++||||+|+++++|++||+ ||+++|+++.|.|+.+.
T Consensus 20 ~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~T 75 (75)
T d2ghpa2 20 YFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHLT 75 (75)
T ss_dssp HHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEECC
T ss_pred HHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEECC
Confidence 5899999999999998664 34699999999999999996 89999999999999763
No 74
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=6e-12 Score=102.43 Aligned_cols=62 Identities=26% Similarity=0.395 Sum_probs=58.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|+.|.|+.++.|++++|||||+|.++++|++||+ |+++.|+|++|.|.+|.+|.+
T Consensus 117 ~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k~e 178 (183)
T d1u1qa_ 117 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKALSKQE 178 (183)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEECCCHHH
T ss_pred hhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEecCCccc
Confidence 58899999999999999999999999999999999999997 788999999999999988654
No 75
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.18 E-value=1.1e-11 Score=92.34 Aligned_cols=57 Identities=19% Similarity=0.260 Sum_probs=50.8
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCC--eEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGD--RVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~G--r~I~V~~A~~k~~ 63 (255)
||++||+|+.|+|+++ ++||||+|.+.++|++||++||+.+|.+ ++|+|++|++.+.
T Consensus 37 ~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~~ 95 (97)
T d1whya_ 37 EFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGPS 95 (97)
T ss_dssp HHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCCC
T ss_pred HHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCCC
Confidence 5899999999999875 5799999999999999999999999986 5899999987553
No 76
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.17 E-value=1.8e-11 Score=91.83 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=50.8
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHH--HhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIR--EMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~--~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|.|+.+ ++||||+|+++++|++||+ ++|..+|.++.|.|++|+.++
T Consensus 39 ~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~~~ 96 (99)
T d1x4fa1 39 LAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKYK 96 (99)
T ss_dssp TTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECSCS
T ss_pred hhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCCcc
Confidence 7999999999999875 5799999999999999997 578889999999999998665
No 77
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.15 E-value=3.3e-11 Score=85.92 Aligned_cols=55 Identities=16% Similarity=0.242 Sum_probs=46.9
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~ 62 (255)
||++|| |+.+++ .++++||||+|.+.++|++||++||+.+|.+++|.|++|....
T Consensus 18 ~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 18 LLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp HTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred HHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 588998 444444 3468999999999999999999999999999999999997643
No 78
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.14 E-value=3.9e-11 Score=88.33 Aligned_cols=56 Identities=13% Similarity=0.036 Sum_probs=50.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHh--cCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREM--HGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~l--nG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|.|+.+ +++|||+|++.++|++||+.| +..+|.+++|.|++|++.+
T Consensus 29 lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~~ 86 (89)
T d1x4da1 29 LVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYK 86 (89)
T ss_dssp TTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCCT
T ss_pred HHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCcc
Confidence 7999999999999876 359999999999999999865 6788999999999998644
No 79
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=1e-10 Score=85.40 Aligned_cols=56 Identities=9% Similarity=0.114 Sum_probs=50.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHh--cCCeeCCeEEEEEecccCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREM--HGREFGDRVISVNKAQPKM 62 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~l--nG~~i~Gr~I~V~~A~~k~ 62 (255)
||++||+|++|+|+.+ ++||||+|++.++|++||+.| +...|.+++|.|++++.+.
T Consensus 28 ~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~~ 85 (88)
T d2cq1a1 28 LGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKE 85 (88)
T ss_dssp TTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCSS
T ss_pred HHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCCC
Confidence 7999999999999865 479999999999999999865 5789999999999998664
No 80
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=4.1e-11 Score=90.61 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=53.4
Q ss_pred CCCCccceEEEEeecCCC--CCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 2 QQCLTHNNDLKIMLERDS--GRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 2 fekFG~I~~V~Iv~Dk~T--g~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
|++||+|++|+|++++.+ ....|++||+|.++++|++||++||+..|++++|.|.++.+
T Consensus 35 ~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 35 CSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDP 95 (104)
T ss_dssp HTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEEECH
T ss_pred hcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCEECCeEEEEEEcCH
Confidence 789999999999987665 34568999999999999999999999999999999999864
No 81
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.08 E-value=6.4e-11 Score=89.25 Aligned_cols=57 Identities=5% Similarity=-0.042 Sum_probs=49.6
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHh--cCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREM--HGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~l--nG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|+++ |+||||+|++.++|++||+.| +...|.+++|+|++++.+..
T Consensus 35 ~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~~~ 93 (104)
T d1wexa_ 35 ALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSKRI 93 (104)
T ss_dssp HHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSSSC
T ss_pred hhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCCcc
Confidence 6899999999999763 689999999999999999877 45678899999999976543
No 82
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=1.9e-11 Score=93.56 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=54.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k 61 (255)
||+.||.|+.+.++.+..+++++|||||+|.++++|++||+ ||++.|.++.|.|..+.++
T Consensus 38 ~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~~~ 97 (112)
T d1wela1 38 FFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPITKK 97 (112)
T ss_dssp HSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEECHH
T ss_pred HHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcChH
Confidence 58999999887777777899999999999999999999996 9999999999999988653
No 83
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=8.1e-12 Score=91.67 Aligned_cols=58 Identities=12% Similarity=0.278 Sum_probs=49.0
Q ss_pred CCCCCccceEEEEe-----ecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 025249 1 MQQCLTHNNDLKIM-----LERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59 (255)
Q Consensus 1 lfekFG~I~~V~Iv-----~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~ 59 (255)
+|++||+|..+.|+ .+..++++++||||+|.++++|++||+ ||+++|.++.|+|+.++
T Consensus 21 ~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~r~k 83 (90)
T d1u2fa_ 21 FFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIRRPH 83 (90)
T ss_dssp HHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCBCTT
T ss_pred HHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEECCCC
Confidence 47778887776553 456788999999999999999999985 99999999999997554
No 84
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.89 E-value=6.4e-10 Score=80.62 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=46.4
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeE-EEEEecccC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRV-ISVNKAQPK 61 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~-I~V~~A~~k 61 (255)
+|++||+|++|++.. .++||||+|.++++|++||+ ||+++|+++. |.|..+..|
T Consensus 23 ~F~~~G~I~~~~~~~------~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~k 77 (81)
T d1wwha1 23 QFAQYGNILKHVMSN------TGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCIDK 77 (81)
T ss_dssp HHHTTSCEEEEEECS------SSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCCH
T ss_pred HHHhhhhhheEEecC------CCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCCh
Confidence 388999999998764 46899999999999999996 9999999975 578877654
No 85
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=1.2e-09 Score=83.47 Aligned_cols=54 Identities=7% Similarity=0.026 Sum_probs=46.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCH-HHHHHHHHHhcCCeeCCeEEEEEeccc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADR-RAMDDAIREMHGREFGDRVISVNKAQP 60 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~-e~a~~AI~~lnG~~i~Gr~I~V~~A~~ 60 (255)
||++||+|+.|.|+++ ++||||+|.+. ++|.+||++||+..|..+.+.|.++..
T Consensus 31 ~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 31 LFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp HTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred HHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 6999999999999864 68999999985 789999999999988877777766654
No 86
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=1e-09 Score=82.40 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=39.1
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFG 49 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~ 49 (255)
||++||+|++|.|+.+ ++||||+|++.++|++||++||+++|.
T Consensus 40 ~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 40 VLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp HHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred HHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 5899999999998875 579999999999999999999999883
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.67 E-value=1.2e-08 Score=82.29 Aligned_cols=62 Identities=26% Similarity=0.431 Sum_probs=55.0
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecccCCC
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG 63 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~~k~~ 63 (255)
||++||+|++|+|++++.|+.+++||||+|.++++|++||+ ++...|..+.|.+....++..
T Consensus 26 ~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~~~~ 87 (183)
T d1u1qa_ 26 HFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVSRED 87 (183)
T ss_dssp HHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCCTTG
T ss_pred HHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhhhccc
Confidence 58999999999999999999999999999999999999998 566788888888887765543
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=3.3e-05 Score=56.36 Aligned_cols=49 Identities=12% Similarity=0.160 Sum_probs=44.1
Q ss_pred CCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 025249 2 QQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59 (255)
Q Consensus 2 fekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~ 59 (255)
|++||+|+-|+++.| -..|||.+-++|.+|++ |++++|.+++|+|....
T Consensus 45 l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~~ 93 (95)
T d1ufwa_ 45 LGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMKVKGRAVKISGPS 93 (95)
T ss_dssp HHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSEETTEEEEEECCC
T ss_pred HhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeEEcceEEEEecCC
Confidence 678999999999998 67899999999999998 99999999999997543
No 89
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.87 E-value=0.00069 Score=46.95 Aligned_cols=56 Identities=11% Similarity=0.092 Sum_probs=47.3
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQ 59 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A~ 59 (255)
+|+++++|.+|.|..- ..+.. .|-|...+.++|..||..||-..|..++|.|+++.
T Consensus 16 ~f~~h~~V~sv~l~~~-~dg~~--~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 16 AFARHGKVKSVELSPH-TDYQL--KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHSCEEEEEECSC-CSTTC--CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHhheeEEEEEEEec-cCCcE--EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 3677899999888553 22333 68999999999999999999999999999999986
No 90
>d1nc8a_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=90.95 E-value=0.03 Score=31.34 Aligned_cols=19 Identities=42% Similarity=1.076 Sum_probs=16.4
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q 025249 93 DDCFKCGRPGHWARDCPSA 111 (255)
Q Consensus 93 ~~~~~~g~~Gh~~~~cp~~ 111 (255)
-.||+||..||.++.|--.
T Consensus 7 ikCfNCGkeGH~ar~CrAP 25 (29)
T d1nc8a_ 7 IRCWNCGKEGHSARQCRAP 25 (29)
T ss_dssp CBCTTTSCBSSCGGGCCSS
T ss_pred eEeecCCccchhhhhccCc
Confidence 4799999999999999543
No 91
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=88.26 E-value=0.1 Score=27.89 Aligned_cols=18 Identities=50% Similarity=1.248 Sum_probs=16.0
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 025249 94 DCFKCGRPGHWARDCPSA 111 (255)
Q Consensus 94 ~~~~~g~~Gh~~~~cp~~ 111 (255)
-||.|+..||+.++|-..
T Consensus 4 vcfscgktghikkdck~e 21 (26)
T d1dsqa_ 4 VCFSCGKTGHIKRDCKEE 21 (26)
T ss_dssp BCTTTCCBSSCTTTTTCC
T ss_pred EEEecCCcccchhhhhhh
Confidence 599999999999999753
No 92
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=85.55 E-value=0.21 Score=30.30 Aligned_cols=18 Identities=44% Similarity=1.230 Sum_probs=15.1
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 025249 94 DCFKCGRPGHWARDCPSA 111 (255)
Q Consensus 94 ~~~~~g~~Gh~~~~cp~~ 111 (255)
.||.|+..|||+.+||..
T Consensus 24 ~C~~Cg~~GH~~~~Cp~r 41 (42)
T d2exfa1 24 GCWKCGKEGHQMKDCTER 41 (42)
T ss_dssp SCSSSCCSSSCTTTCCSS
T ss_pred ccccCCCCCeecccCCCC
Confidence 588999999999999853
No 93
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=85.27 E-value=0.21 Score=30.31 Aligned_cols=18 Identities=50% Similarity=1.304 Sum_probs=16.6
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 025249 94 DCFKCGRPGHWARDCPSA 111 (255)
Q Consensus 94 ~~~~~g~~Gh~~~~cp~~ 111 (255)
.||+|+..||++.+||..
T Consensus 3 ~C~~Cg~~GH~~~~Cp~~ 20 (42)
T d2exfa1 3 KCFNCGKEGHTARNCRAP 20 (42)
T ss_dssp CCTTTCCSSSCTTTCSSC
T ss_pred ccccCCCcCcCcccCcCC
Confidence 699999999999999975
No 94
>d1a6bb_ g.40.1.1 (B:) Zinc finger protein ncp10 {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=78.49 E-value=0.67 Score=27.51 Aligned_cols=21 Identities=48% Similarity=1.236 Sum_probs=17.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCC
Q 025249 92 QDDCFKCGRPGHWARDCPSAV 112 (255)
Q Consensus 92 ~~~~~~~g~~Gh~~~~cp~~~ 112 (255)
.+-|--|-..|||+++||...
T Consensus 10 kDQCAyCke~GHW~~dCPkkp 30 (40)
T d1a6bb_ 10 RDQCAYCKEKGHWAKDCPKKP 30 (40)
T ss_dssp SSSCSSSCCTTCCTTSCSSSC
T ss_pred chhhHHHhhcCchhhhCccCC
Confidence 456888999999999999663
No 95
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.41 E-value=2.1 Score=30.58 Aligned_cols=36 Identities=8% Similarity=0.094 Sum_probs=28.2
Q ss_pred CCCCCccceEEEEeecCCCCCCCcEEEEEeCCHHHHHHHHHHhc
Q 025249 1 MQQCLTHNNDLKIMLERDSGRPRGFGFITYADRRAMDDAIREMH 44 (255)
Q Consensus 1 lfekFG~I~~V~Iv~Dk~Tg~srGfaFVtF~~~e~a~~AI~~ln 44 (255)
||+.||.|.-..| .| | -|||...+.|.|+.+++.++
T Consensus 35 lFSpfG~V~VswI-dd--T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 35 LFSAFGNIQISWI-DD--T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp HHTTTCSCCCEEE-ET--T-----EEEEECSCHHHHHHHHHHHH
T ss_pred HhcCCCceEEEEe-cC--c-----eEEEEecCHHHHHHHHHHhc
Confidence 6889998875555 33 2 79999999999998887655
No 96
>d1cl4a_ g.40.1.1 (A:) Nucleocapsid protein from mason-pfizer monkey virus (MPMV) {Mason-pfizer monkey virus [TaxId: 11855]}
Probab=63.57 E-value=2.2 Score=24.12 Aligned_cols=19 Identities=42% Similarity=1.003 Sum_probs=16.3
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q 025249 93 DDCFKCGRPGHWARDCPSA 111 (255)
Q Consensus 93 ~~~~~~g~~Gh~~~~cp~~ 111 (255)
+-|.+|.++-||+++|-..
T Consensus 3 ~lCPrC~kG~HWa~~Crsk 21 (32)
T d1cl4a_ 3 GLCPRCKRGKHWANECKSK 21 (32)
T ss_dssp CSCSSCSSCSSCSTTCCCT
T ss_pred ccCccccCcchHHHHhhhh
Confidence 4689999999999999754
No 97
>d1dsva_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=63.53 E-value=1.9 Score=24.27 Aligned_cols=19 Identities=32% Similarity=0.863 Sum_probs=16.1
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q 025249 92 QDDCFKCGRPGHWARDCPS 110 (255)
Q Consensus 92 ~~~~~~~g~~Gh~~~~cp~ 110 (255)
..-|.+|.++-||+++|-.
T Consensus 2 p~lCPrC~kG~HWa~~Crs 20 (31)
T d1dsva_ 2 PGLCPRCKKGYHWKSECKS 20 (31)
T ss_dssp CCBCTTTCSSBSCTTTCCC
T ss_pred CccCccccCcchHHHHhhh
Confidence 3468999999999999964
No 98
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=54.10 E-value=5 Score=27.54 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=21.1
Q ss_pred cceEEEEeecCCCCCCCcEEEEEeCC
Q 025249 7 HNNDLKIMLERDSGRPRGFGFITYAD 32 (255)
Q Consensus 7 ~I~~V~Iv~Dk~Tg~srGfaFVtF~~ 32 (255)
+|++|+|-+-...++.++||-|+|.+
T Consensus 2 ~ITdVrI~~i~~~gklkA~asvt~d~ 27 (84)
T d2i9xa1 2 KVTDVRLRKIQTDGRMKALVSITLDE 27 (84)
T ss_dssp CEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred eeEEEEEEEecCCCCEEEEEEEEECC
Confidence 57888886654567899999999987
No 99
>d2ia9a1 d.366.1.1 (A:1-92) Putative septation protein SpoVG {Bacillus subtilis [TaxId: 1423]}
Probab=51.79 E-value=5.6 Score=27.74 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=21.2
Q ss_pred cceEEEEeecCCCCCCCcEEEEEeCC
Q 025249 7 HNNDLKIMLERDSGRPRGFGFITYAD 32 (255)
Q Consensus 7 ~I~~V~Iv~Dk~Tg~srGfaFVtF~~ 32 (255)
+|++|+|-.-...++.++||-|+|.+
T Consensus 2 ~ITdVrI~~i~~~g~lkA~asvt~d~ 27 (92)
T d2ia9a1 2 EVTDVRLRRVNTDGRMRAIASITLDH 27 (92)
T ss_dssp CEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred eeEEEEEEEecCCCCEEEEEEEEECC
Confidence 57888887665667899999999987
No 100
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.95 E-value=11 Score=25.97 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=35.1
Q ss_pred ccceEEEEeecCCCCC--CCcEEEEEeCCHHHHHHHHHHhcCCeeCCe-----EEEEEecc
Q 025249 6 THNNDLKIMLERDSGR--PRGFGFITYADRRAMDDAIREMHGREFGDR-----VISVNKAQ 59 (255)
Q Consensus 6 G~I~~V~Iv~Dk~Tg~--srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr-----~I~V~~A~ 59 (255)
+++.-...+.-+.+-+ .---|+|.|.+.+++..-.+.++++.+.+. +-.|++|-
T Consensus 26 ~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~VE~AP 86 (91)
T d1uw4a_ 26 PEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAP 86 (91)
T ss_dssp CCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECEEEECS
T ss_pred CceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeEEEEcC
Confidence 3444444444443322 224789999999999999999999887532 23566663
No 101
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=33.51 E-value=3.3 Score=28.03 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=21.7
Q ss_pred CCCcEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 21 RPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 21 ~srGfaFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
.++|||||..++.+++--.-..|+. -|++=+|.|.+.
T Consensus 26 ~~~G~GFv~~d~~~DifI~~~~~~~-A~~GD~V~v~i~ 62 (79)
T d2ix0a2 26 TEKGFGFLEVDAQKSYFIPPPQMKK-VMHGDRIIAVIH 62 (79)
T ss_dssp CC--CEEEEEETTEEEEECHHHHTT-CCTTCEEEEEEE
T ss_pred eCCCcEEEEECCCCcEEECHHHHcC-CCCCCEEEEEEE
Confidence 3679999998876544333445553 355556777664
No 102
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=30.45 E-value=7.5 Score=20.33 Aligned_cols=21 Identities=19% Similarity=0.485 Sum_probs=17.2
Q ss_pred cEEEEEeCCHHHHHHHHHHhc
Q 025249 24 GFGFITYADRRAMDDAIREMH 44 (255)
Q Consensus 24 GfaFVtF~~~e~a~~AI~~ln 44 (255)
-|||-+|...+.+.+-++.++
T Consensus 5 p~cfkeftrkdnm~ahvkiih 25 (26)
T d2drpa2 5 PFCFKEFTRKDNMTAHVKIIH 25 (26)
T ss_dssp TTTCCEESCHHHHHHHHHHHT
T ss_pred chhhHHhccccCceEEEEEec
Confidence 378999999999988877654
No 103
>d1sfea2 c.55.7.1 (A:12-92) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=24.64 E-value=71 Score=20.24 Aligned_cols=12 Identities=33% Similarity=0.421 Sum_probs=9.8
Q ss_pred CCcEEEEEeCCH
Q 025249 22 PRGFGFITYADR 33 (255)
Q Consensus 22 srGfaFVtF~~~ 33 (255)
.+|.|+|.|.+.
T Consensus 21 ~~Glc~i~F~d~ 32 (81)
T d1sfea2 21 ERGICAILLGDD 32 (81)
T ss_dssp SSSEEEEEEESC
T ss_pred CCcEEEEEEecC
Confidence 579999999653
No 104
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=24.01 E-value=24 Score=24.78 Aligned_cols=21 Identities=5% Similarity=0.170 Sum_probs=18.6
Q ss_pred cEEEEEeCCHHHHHHHHHHhc
Q 025249 24 GFGFITYADRRAMDDAIREMH 44 (255)
Q Consensus 24 GfaFVtF~~~e~a~~AI~~ln 44 (255)
..+|+.|+++++|++|++.|.
T Consensus 79 stvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 79 ACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp SCEEEEESSHHHHHHHHHHSC
T ss_pred CEEEEEeCCHHHHHHHHHHcC
Confidence 368999999999999999875
No 105
>d1pqsa_ d.15.2.2 (A:) Cell division control protein 24, CDC24, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.35 E-value=27 Score=23.33 Aligned_cols=28 Identities=11% Similarity=0.278 Sum_probs=19.9
Q ss_pred EEEEeCCHHHHHHHHHHhcCCeeCCeEEEE
Q 025249 26 GFITYADRRAMDDAIREMHGREFGDRVISV 55 (255)
Q Consensus 26 aFVtF~~~e~a~~AI~~lnG~~i~Gr~I~V 55 (255)
=||++++.++.+-|++++. +...+.|.|
T Consensus 47 D~V~i~sddd~~~a~~~~~--e~~~~~L~i 74 (77)
T d1pqsa_ 47 DFVVLGSDEDWNVAKEMLA--ENNEKFLNI 74 (77)
T ss_dssp EEEECCSTTHHHHHHHHHH--HHCCCEEEE
T ss_pred CEEEEeccchHHHHHHHHH--hcccceEEE
Confidence 4899999999999987664 333444444
No 106
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=20.38 E-value=37 Score=23.35 Aligned_cols=22 Identities=9% Similarity=-0.109 Sum_probs=19.2
Q ss_pred EEEEEeCCHHHHHHHHHHhcCC
Q 025249 25 FGFITYADRRAMDDAIREMHGR 46 (255)
Q Consensus 25 faFVtF~~~e~a~~AI~~lnG~ 46 (255)
..|+.|+++++|++|.++|...
T Consensus 88 t~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 88 AFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp CEEEECSSHHHHHHHHHHHTTT
T ss_pred eEEEEeCCHHHHHHHHHHHHHh
Confidence 6799999999999999988743
No 107
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.11 E-value=69 Score=22.71 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=23.8
Q ss_pred EEEeCCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 025249 27 FITYADRRAMDDAIREMHGREFGDRVISVNKA 58 (255)
Q Consensus 27 FVtF~~~e~a~~AI~~lnG~~i~Gr~I~V~~A 58 (255)
.+||..++.+++||+.|-.++.....|.|.-+
T Consensus 9 i~tyn~~~~l~~~l~sl~~q~~~~~~iiV~d~ 40 (265)
T d1omza_ 9 MQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNN 40 (265)
T ss_dssp EEESSCHHHHHHHHHHHTTSTTEEEEEEEECC
T ss_pred EEcCCCHHHHHHHHHHHHcCCCcCeEEEEECC
Confidence 46889999999999998776665555555544
Done!